Cla97C01G017880 (gene) Watermelon (97103) v2

NameCla97C01G017880
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr01 : 31288892 .. 31289392 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTCTCGGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCTCCAGCGCCGGCACCGGGTTCTTCACAGCCTCTAACTCCGCCACCAGCCACTCCGGCGCCTTCTCCGGTGGCTCTCCCTCCATCTCCGACTCCGACGCCAAACAGAGCACCATCGCCTTCACCGGCTCCCGCGTCCCCCTCACCCGCTCCTGGAGCTCCGTCACCGGCCCCAGCAGCTCCTGCCCCTGCTCCGGCAACTACTGCTCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTTCGGGATCTCCCACCGGTGGTCCTGTAGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCTGCACCCCAAGCACCGGCGGCCGACAACCCAGCTGGAGCAGCGTCACACATCGGTGGAGCGGCGACATTCGGAATCGCTGTTGCTGGAACTCTGTTCGCAGTGATTTTAGCGTAG

mRNA sequence

ATGGGATTCTCGGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCTCCAGCGCCGGCACCGGGTTCTTCACAGCCTCTAACTCCGCCACCAGCCACTCCGGCGCCTTCTCCGGTGGCTCTCCCTCCATCTCCGACTCCGACGCCAAACAGAGCACCATCGCCTTCACCGGCTCCCGCGTCCCCCTCACCCGCTCCTGGAGCTCCGTCACCGGCCCCAGCAGCTCCTGCCCCTGCTCCGGCAACTACTGCTCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTTCGGGATCTCCCACCGGTGGTCCTGTAGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCTGCACCCCAAGCACCGGCGGCCGACAACCCAGCTGGAGCAGCGTCACACATCGGTGGAGCGGCGACATTCGGAATCGCTGTTGCTGGAACTCTGTTCGCAGTGATTTTAGCGTAG

Coding sequence (CDS)

ATGGGATTCTCGGGGGTTCGATTCGTTGTGATTTTTGCTTTGTTGACGAGGTTATGTATGGCTCAGGCTCCAGCGCCGGCACCGGGTTCTTCACAGCCTCTAACTCCGCCACCAGCCACTCCGGCGCCTTCTCCGGTGGCTCTCCCTCCATCTCCGACTCCGACGCCAAACAGAGCACCATCGCCTTCACCGGCTCCCGCGTCCCCCTCACCCGCTCCTGGAGCTCCGTCACCGGCCCCAGCAGCTCCTGCCCCTGCTCCGGCAACTACTGCTCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTTCGGGATCTCCCACCGGTGGTCCTGTAGTTCCACCCATTGCTTCTCCTCCTTCACCCACCGGAATCGAGGTGCCTTCACCTGCACCCCAAGCACCGGCGGCCGACAACCCAGCTGGAGCAGCGTCACACATCGGTGGAGCGGCGACATTCGGAATCGCTGTTGCTGGAACTCTGTTCGCAGTGATTTTAGCGTAG

Protein sequence

MGFSGVRFVVIFALLTRLCMAQAPAPAPGSSQPLTPPPATPAPSPVALPPSPTPTPNRAPSPSPAPASPSPAPGAPSPAPAAPAPAPATTAPTPAPSSSPTPSGSPTGGPVVPPIASPPSPTGIEVPSPAPQAPAADNPAGAASHIGGAATFGIAVAGTLFAVILA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G017880.1Cla97C01G017880.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 39..55
score: 47.06
coord: 17..38
score: 27.27
coord: 56..73
score: 30.0
coord: 76..101
score: 40.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..134

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G017880Watermelon (97103) v2wmbwmbB005
Cla97C01G017880Watermelon (97103) v2wmbwmbB041
Cla97C01G017880Silver-seed gourdcarwmbB0056
Cla97C01G017880Silver-seed gourdcarwmbB0426
Cla97C01G017880Silver-seed gourdcarwmbB0655
Cla97C01G017880Silver-seed gourdcarwmbB0791
Cla97C01G017880Cucumber (Gy14) v2cgybwmbB093
Cla97C01G017880Cucumber (Gy14) v2cgybwmbB173
Cla97C01G017880Cucumber (Gy14) v2cgybwmbB394
Cla97C01G017880Cucumber (Gy14) v1cgywmbB127
Cla97C01G017880Cucumber (Gy14) v1cgywmbB272
Cla97C01G017880Cucumber (Gy14) v1cgywmbB537
Cla97C01G017880Cucurbita maxima (Rimu)cmawmbB162
Cla97C01G017880Cucurbita maxima (Rimu)cmawmbB165
Cla97C01G017880Cucurbita maxima (Rimu)cmawmbB670
Cla97C01G017880Cucurbita maxima (Rimu)cmawmbB801
Cla97C01G017880Cucurbita maxima (Rimu)cmawmbB875
Cla97C01G017880Cucurbita moschata (Rifu)cmowmbB003
Cla97C01G017880Cucurbita moschata (Rifu)cmowmbB146
Cla97C01G017880Cucurbita moschata (Rifu)cmowmbB150
Cla97C01G017880Cucurbita moschata (Rifu)cmowmbB642
Cla97C01G017880Cucurbita moschata (Rifu)cmowmbB775
Cla97C01G017880Cucurbita moschata (Rifu)cmowmbB849
Cla97C01G017880Wild cucumber (PI 183967)cpiwmbB101
Cla97C01G017880Wild cucumber (PI 183967)cpiwmbB183
Cla97C01G017880Wild cucumber (PI 183967)cpiwmbB433
Cla97C01G017880Cucumber (Chinese Long) v3cucwmbB103
Cla97C01G017880Cucumber (Chinese Long) v3cucwmbB181
Cla97C01G017880Cucumber (Chinese Long) v3cucwmbB430
Cla97C01G017880Cucumber (Chinese Long) v2cuwmbB099
Cla97C01G017880Cucumber (Chinese Long) v2cuwmbB180
Cla97C01G017880Cucumber (Chinese Long) v2cuwmbB412
Cla97C01G017880Bottle gourd (USVL1VR-Ls)lsiwmbB115
Cla97C01G017880Bottle gourd (USVL1VR-Ls)lsiwmbB259
Cla97C01G017880Bottle gourd (USVL1VR-Ls)lsiwmbB424
Cla97C01G017880Melon (DHL92) v3.6.1medwmbB260
Cla97C01G017880Melon (DHL92) v3.6.1medwmbB303
Cla97C01G017880Melon (DHL92) v3.6.1medwmbB505
Cla97C01G017880Melon (DHL92) v3.5.1mewmbB275
Cla97C01G017880Melon (DHL92) v3.5.1mewmbB314
Cla97C01G017880Melon (DHL92) v3.5.1mewmbB513
Cla97C01G017880Watermelon (Charleston Gray)wcgwmbB060
Cla97C01G017880Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G017880Watermelon (Charleston Gray)wcgwmbB316
Cla97C01G017880Watermelon (97103) v1wmwmbB080
Cla97C01G017880Watermelon (97103) v1wmwmbB234
Cla97C01G017880Watermelon (97103) v1wmwmbB355
Cla97C01G017880Wax gourdwgowmbB287
Cla97C01G017880Wax gourdwgowmbB398
Cla97C01G017880Wax gourdwgowmbB553