Cla97C01G014350 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G014350
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	NADH dehydrogenase-like complex O
Location	Cla97Chr01 : 28077409 .. 28083556 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCTCTGCATCTCTTTCTCACAGCTCTTTCTCATGCCTCACTCAGTTCCCACAAAGTTTTAGAAGAAACCCACTTCGTTTTCACCCCATTCGAGCCGTAAAATCCACTGAACCGGAGAAGAAGGTATCAGAGACCAAAACCCAGGAGCCTTCCATGGCTGAACCTTCAAGTTCAAGCTCCCCCACCGCCTCTCCCAAGGTTACAAAGAAGCCCGTATATTCGAGTGAGTTTCTTCTCCTATTTTGCTTCAGTCTATTGGGAATTTGACGATTCAATTTAGATTTGTTGATTTCGTTTTTTATGTGCTTTCTGTAGTGAAGAAGGGTCAGATTGTGAGAGTTGATAAAGAGAAGTATCTTAATAGTGTTAATGTAAGTAGTTTTCTAGATTCTTTTTTTGTGGTAATGAGTTTCCTTTTTATAAGTTTATAAATTAACCAAAAATCTATTAATTAGAGCAATGTTACTCAAGCAAGGAGAAAGCTTCTTCATAACTTGCTTCATTGCTTGTTCTTTGTGTTTTAAGTTTTTTTAATCCTTACATTTCCAATTCAGCCGTATACCACCCTGTGTCTTTCTATGGCAAAGCCAAATCCAACAAGAGAAGTTGAAGAGATATTTTTTAATGGTTTCGTGGCAGGAGGGAAGGGTGAAAGAAAAGAAGGAAACAAAGGAACAACCCCAAGTGATGAACTTTAACCATTAATGAACAATTCAAGAAAATATGAAGTTGCTTCTAGTTTGGAATCTTATTCATCCAGTGGAAGTAAGTCGGGCGTGGACTATCAAACTCTTCCTAACTGGCTCAGTGAGCTGTGTTTGAGACTTTGAGTTATGCTTCTCCTTTGATCCATTCTACTTTTCCTCTTTGAAGCATGACTGGAAAAGTGTGGCTACAAATACAATAGTTTAATATAGAATGATAGGCAACAGTCTAGACTGTACACGAGTATGAACAATTAAAGCGTAGTTTCTACTCTGTTCAAGGGAATTTCTATAATAATCGTAGCTCTGTGTGGATTCTATCTATCTCTGTAGAATTCAGGTAGGCCTCCAATTGTAGAAGTATTTGAAAGAGAGGATAAAAAGGGGAATGCCACTTTTAAGAGTTAGCTTGCTAGGCTGTGTGTACACTTCCTGTAGTAAGGAGTGAGTTTGTTTCAATCTCTTCAATTGACGTTGAACCAGTATTCAACTATTCAAACTTAATTTCTAAAGCAATGAATCATAAAACGTGGAGTTCTCGACTCTTCTTTCCTTGAGTGAGAGTTATATGGGTCCCACTGCTTCCCTTCCTAATGACTTCAAGGTACATAAATAACCCAGATCGTGGTTCTGGTTCAAATCCTCAAAATCCTCAAATAAGGACAATAAAATGTTATAGGTAACTCCTATCATCGTGGGTAAAGTTGGTCTAACTAAAACATTTGATGAAGTCAACAGCTAGTTCTTCATACAAAATGAGTTAGTTGGTCTTCCAATTCCCCCATGCCCCCACGCCTGAATCGTCTTGAAAGAGGGATGTCTTCAAAACCATTGACACACGTGGCATTATTTCTAAGGTGTTGGTTTAGTCCTATGATGACCTGACCTTTCTGCTCAACTATTATAGTCAAGATTGGGGCAATGGGGAAACTGTACGTGATAAATGGGAAGGTGAGATAGTGTTTAGTCATCATATGTCACAATGAGTTTAGATAGACTTGGATCGTGACCTCTTTTTATATGGAATGATGTATAAGAAGAAGAAAGCTAATGCTTTATTTCATCTTTCTCTATCTTGGTAGACCATTGAATAAGAACGACATTGGAGGTCCAAAAATGAGAAGAAGAAAGGTTATTAGATTTAGAGTTAAGTCAATCAAGTGAACCTTATTAGGGAGTGCAATAATGAACCTGAGATTATTGTCCAAGACTTGATTTGGATTCAATCGTGTAATAAAAAAAATGATCATATTGAGACGTCAATGTCAAACTCCATGACTATTTGAAAATAAAATAAGATTGATCAAGGAGTTTTCTCCATCTACCTTTTCAAGAGAAGGAGAAATTTTTATGGCTAGCCAGGGCGTGCACTTTGTTGTGGGGTCTTTGGGGGGAGAGAAATAATTGAATTTTCAAAGGGCTTGATAGGGAGTCTTTTGATGTTTGATCCCTTTTGAGATTTCATGTTTCTTTCTGGGCTTCTGTAACAAACATTGTCTATAATTATTCGCAAAGTCTTCTTTTACTTGATTGGAGTGTCTTTTTGTACTGATGATCCCTTTTATGCATGCGTGTGTGTTTTTTTATGTCCTTGTACTTTTATATTCTTTTTCAATGAAAGTTGGTTTTTACATAATAATCTAATAAAACATGAGAACAATAGTCTAACAAAAGGTTTGATTTTGTGAGCTCTTCTCTCCCTGGCCTGTCCAGTATAAGGTATATCTATCCAACAAAGAAAGTTTTTGCAAAAGTTGTTATCTTCTTGTACGACAACCGTTTGATGAATTCTATTTAATATCTTCATTCATCACCATCAAATTTTAATACACAAACATAATGTTAGTTTGAAGGAACGAATTTTGAACTGTGCTCATTCTCCCACTAAGACATACATCTTTCCTATCGTTATTGGACTGATGACAAACAATTTTTTTTGTTCTTTACTATTAGTATCTTTCTGTTGGACATCCACCTTATTACAAGGGCTTGGATTACATTTATGAAGACCGTGGTGAGGTCAGTTTATACAGATTACACACAAGCCTATTAAAATATATCAGGGACTTTTGATGAGTCATCTTTTTTGGTTTCAATCTTCTTTCATCAGGTATTGGATCTTCGCATTTTTGAGACAGGAGAATATGCACTTGTGAGTAACTTTCATTTGGATTCCATGTATATATGATGCTTTGGCTTTTCTTTTTCTTTTCTATTACTATATTAGATCTGTTGGACATCCACCTTATCACAAGTTTCTTTATTACTATCATTTATCAAAATAGTGAGAGAAAAAGTAAAATTAGCTCAAGCAAAATGGATATTTCCGTTGGTTACAAATGCATTATTGTGTTACATTTTTACTCAAAATTTTTGGACAGATTGCATGGGTTGGTATTCCAACTGCACCAGCTTGGCTGCCGACAGACATGCTTATAAAGGTATTTATTTGAAGTTGTTCTTGATATCTTTCACATCCTGTGGTCATCAACTCGTCACCAAGTGAGTTTCAAATAAGCAAGATCATATATTTAAACACTAGTATCATGGATAGTTGGAGAAAGCTTAGCAATATAGGTTAATTCTTACATAAAAGTTACCCTTCATCAGTTCATCTGAACTAAGATCAGTAGTAATCCTTAAATGAATTTCCTAGAGTTGCATCACTGATGCAGAAATAGCATTGACCTCCTCAAAGGGGGCTGTCTATGAAGGTATAGAAAGTAGATATTGGAATTTTTATCATTCATTCCTTTAGTTTTGCTAGAATACCACCTAACATGGAAACATCCAAGAACAGAAAGAAAATGCTAGAACACTCAAATTTGGAAATATATGAAAATATGCTGTAAAAGAAAAGTAACAAGATAATCTAGCTTTTTGAGAGGGCTAGTCTCTCCCAAATTCCTCAAAGGATATCTACAAAATTCTTCATACCTTTCCTCCCAACCCACTCCCTCTATTTAAAACTAGAAGCCCTAACAAACTTACTATCTAATTACTAATACGCTCCTTTTAATGACCATACTAATAATCTTAATATTTTCCCAACTAGGGGTCTTACAAGTTTCTTTTTTCCTCCTTTAAAGATTCGATGGGTTACGAGAATGAGGAAATTGGGTGATTTTATAGGACATGCTCTCTCATTGCTAACTCAAACTTTGCTCCCTCTCTTGTATTGGGTGTCCCACCAAAGACATGATACTTATGACCTACCCTACTAATTCTTAGGGAAGCTCACCAATGGTCATTCCTTACGATACACACAGTCCCCTTACTAATTCTTGGGAAGACTTTGCCTACGCCAAAGTCAATTCAGTGAGAAACCAGATTTTGAATCAGGGAAGTTTTACCTATCCCAAGATTTATTCCATGTGATAACAAAGTTTCTCTTTTTTCTAGCTTCTTTTTCGAGTTTGAGACAGTTCGGGTATTAAAGTTTCGTTTGATAATTACTTGGTTTTTTGAAAATTAAGTTTATTAATCCTACTTCTACTTATTACTATTAGGGAAATTACACTTTTAGTCCCGAGGTTTAGGGTTGATGTCTATTTGGTCCATGAAGTTTGAACCAGACATTTTAGTCTTCGAGGTTTAGAAAATTGTTCTAAATAGTCCCTGTGGTAGTTAAATGAAGGGTCAAATTTGAGCTGATTAGATTGCGACGTGGCTATTCCCTCTTTTTGTCCGTGGTTGTTCACCCTGGTACAAAAAAAAAATTCAAACACATTGTCCCTTAGTTCTTCACCTCTCCTTGGATCTTGTTCCTCATTTCCCACATTTCCTTTTCTCCCCGCTTTCTAATCCAACAAACTGCCCTTTTCTTTTTCATCCCCACATAAAACCCTCTCTTCTTCCTTCATTTCTTTGAAAACCCTTTCCGTTTCTTTTTCATTCTCTTCCTTTGATTTAAACGAATTCCCATGGCTCTCGTCTATGTAAAAACTCAATTTCATGTGTTGCCTGCTGATGGCAACTTGTTGATAGGATTTCTTTTTTTTTTTAAAAAAAAAAATTACTTTCTTCATCTCTCTTCTTCTTTTCCTTTTCTTTATTTATTCGTTTTTTTTAAAACCATCAATTTAAGTTCTTGCACAAGGAGAAGAAAACCTAGAAAATGGAAGAAAATGCTAAATTTTAAACCAGTAGAGATAAATGCAAACAATTTACTAAAAAGAACTTAAGCTTGAGCATGGGTGATACTGAGATCTTGAAAGGACTTGGAGTCCTAAACTATTCCGTCAAAATGATTAAAATTTGCAGGAATTGAATGTGCATTAGGTGTTGTGGAGGGTTTGAAACAAAGAAAGTTGAGAAGAAGCCCTCTACATTACTTCTCAGTCACAATCCTAATCGGGAAAGCCCTCTGTAAATATAATTTATCAACGTTGTCTTCCTTGTTAAATGTCTTAAGTGGGCACTTTATCAACTTCATATCTCCAAACCTCTTTACAACCCCCCCAATTTCTCTTTAAATTACTCCCTTCCCTCACACACTTCATGCAATTCATTGAAGTTCGTAAGCTTGAATTGATGGCAATTAGCATGCTCATTCAATAGTCTCTTGCTTGCTATGCTGATGCGAAACAGGTCTATTTTGCTCTTTCGTTCCTCACCTCCCTGTGATAAAGAAGAAACCAAAAATTTTCATAATAAAGAACAAAGAACAGATTAGTAATAGAAAAGATTTCTATAGGGAACCACTCGCTCCTTCCAAATCTGTTGAGCCTATTCCAGTGTTGTAGGCAGAAGTGGTATGAGGCAAAGGCGGGGACGAGAGCAGGAAGACTGCCCAATAAGAAAGAGGAAAAAGAGGGAAGGAAGAGGAAGAGAGAAGGATGGCCACTTCACAGTCTAATAAGCTAAGATTGATCCTTCATTTAACTGCTACATGAGCATTCTGTTAAGTAAACTAACGGCATGGACTGTTTAGAATCATTTTCCAAACCTCAGGGACTAAAATGTTTGTTTTCAAACTTCAGGAATCAAATAAACATCAATCATAAATTTTAGGGACCAAAAATATATTTTGCCCTAGTACTTAAGATTATTTTCAAAAATCAACCTAAGCTTTAAAAACTATTAAAGTAGTTTTTAAAATTTTGTTTTTATTTTTGAAATTTAGCTAAAAATACAAATATTTAATTAAGAAAGATGAAAACTTTAGTGAAGAAACCATAAGAAACAAACACAATTAGTCTTTGGTATAATTTTTTACCCAGGAATTGGTAGGTCTCTCGAAAACATCCCATCCTATTGGGGTCTTCTATTTACTATTTTCTTTCGAAGATTCTGAAGGTTAAAGATTTAAACCCAGAGAAATGGGCAAGTTTATATAGAATAACTTCCACTTTTAAACCATTTCTTGCAGTTAGTAGTTATGATGATAACTTTGCTCTTTCTGGCAGTCGGAGAATCTCAACTACGAAAGACTCTAA

mRNA sequence

ATGGCTTTCTCTGCATCTCTTTCTCACAGCTCTTTCTCATGCCTCACTCAGTTCCCACAAAGTTTTAGAAGAAACCCACTTCGTTTTCACCCCATTCGAGCCGTAAAATCCACTGAACCGGAGAAGAAGGTATCAGAGACCAAAACCCAGGAGCCTTCCATGGCTGAACCTTCAAGTTCAAGCTCCCCCACCGCCTCTCCCAAGGTTACAAAGAAGCCCGTATATTCGATGAAGAAGGGTCAGATTGTGAGAGTTGATAAAGAGAAGTATCTTAATAGTGTTAATTATCTTTCTGTTGGACATCCACCTTATTACAAGGGCTTGGATTACATTTATGAAGACCGTGGTGAGGTATTGGATCTTCGCATTTTTGAGACAGGAGAATATGCACTTATTGCATGGGTTGGTATTCCAACTGCACCAGCTTGGCTGCCGACAGACATGCTTATAAAGTCGGAGAATCTCAACTACGAAAGACTCTAA

Coding sequence (CDS)

ATGGCTTTCTCTGCATCTCTTTCTCACAGCTCTTTCTCATGCCTCACTCAGTTCCCACAAAGTTTTAGAAGAAACCCACTTCGTTTTCACCCCATTCGAGCCGTAAAATCCACTGAACCGGAGAAGAAGGTATCAGAGACCAAAACCCAGGAGCCTTCCATGGCTGAACCTTCAAGTTCAAGCTCCCCCACCGCCTCTCCCAAGGTTACAAAGAAGCCCGTATATTCGATGAAGAAGGGTCAGATTGTGAGAGTTGATAAAGAGAAGTATCTTAATAGTGTTAATTATCTTTCTGTTGGACATCCACCTTATTACAAGGGCTTGGATTACATTTATGAAGACCGTGGTGAGGTATTGGATCTTCGCATTTTTGAGACAGGAGAATATGCACTTATTGCATGGGTTGGTATTCCAACTGCACCAGCTTGGCTGCCGACAGACATGCTTATAAAGTCGGAGAATCTCAACTACGAAAGACTCTAA

Protein sequence

MAFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEPEKKVSETKTQEPSMAEPSSSSSPTASPKVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL

Homology

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BLAST of Cla97C01G014350 vs. NCBI nr
Match: XP_008441053.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 144/160 (90.00%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MAFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXXXX 60
           M FSASLSH+SFSCLTQFPQ+FRRNPLR H IRAVKSTEPEKKV     XXXXXXXXXXX
Sbjct: 1   MVFSASLSHNSFSCLTQFPQNFRRNPLRVHLIRAVKSTEPEKKVPETKTXXXXXXXXXXX 60

Query: 61  XXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 120
           XXXXXXXX   KPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPY+KGLDYIYEDRGEVLD
Sbjct: 61  XXXXXXXXXXXKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYFKGLDYIYEDRGEVLD 120

Query: 121 LRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           LRIFETGEYALIAWVGIPTAPAWLPT+MLIKSE LNYERL
Sbjct: 121 LRIFETGEYALIAWVGIPTAPAWLPTEMLIKSEKLNYERL 160

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BLAST of Cla97C01G014350 vs. NCBI nr
Match: XP_022977966.1 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 137/160 (85.62%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MAFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXXXX 60
           MAFSASLSH+SFSCLTQFPQSFRRNPLRF+PIRA+KST+PE K S         XXXXXX
Sbjct: 1   MAFSASLSHNSFSCLTQFPQSFRRNPLRFNPIRALKSTDPENKASETKTQQPPMXXXXXX 60

Query: 61  XXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 120
           XXXXXXXX     VYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD
Sbjct: 61  XXXXXXXXXXXXXVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 120

Query: 121 LRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           +RIFETGEYALIAWVG+PTAPAWLPTDMLIKSE LNYERL
Sbjct: 121 IRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 160

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BLAST of Cla97C01G014350 vs. NCBI nr
Match: XP_022950243.1 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 6.1e-62
Identity = 136/160 (85.00%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MAFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXXXX 60
           MAFSASLSH+SFSCL+QFPQSFRRNPLRF+PIRA+KST+PE K S         XXXXXX
Sbjct: 33  MAFSASLSHNSFSCLSQFPQSFRRNPLRFNPIRALKSTDPENKASETKTQQPPMXXXXXX 92

Query: 61  XXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 120
           XXXXXXXX     VYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD
Sbjct: 93  XXXXXXXXXXXXXVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 152

Query: 121 LRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           +RIFETGEYALIAWVG+PTAPAWLPTDMLIKSE LNYERL
Sbjct: 153 IRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 192

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BLAST of Cla97C01G014350 vs. NCBI nr
Match: XP_022132588.1 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 3.9e-61
Identity = 138/160 (86.25%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 1   MAFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXXXX 60
           MAFSASLSHSSFSCLT F Q+FRRNPL FHPIRAVKSTEPE+K S        XXXXXXX
Sbjct: 1   MAFSASLSHSSFSCLTHFSQNFRRNPLHFHPIRAVKSTEPEQKAS-----EAKXXXXXXX 60

Query: 61  XXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 120
           XXXXXXXX    PVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPY+KGLDYIYEDRGEVLD
Sbjct: 61  XXXXXXXXXXXXPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYFKGLDYIYEDRGEVLD 120

Query: 121 LRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           +RIFETGEYALIAWVG+PTAPAWLPTDMLIKSE LNYERL
Sbjct: 121 IRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 155

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BLAST of Cla97C01G014350 vs. NCBI nr
Match: XP_023544121.1 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.0 bits (606), Expect = 2.2e-59
Identity = 136/167 (81.44%), Postives = 142/167 (85.03%), Query Frame = 0


Query: 1   MAFSASLSHSSFSCLTQFPQSFRRN-------PLRFHPIRAVKSTEPEKKVSXXXXXXXX 60
           MAFSASLSH+SFSCLTQFPQSFRRN        LRF+PIRA+KST+PE K S        
Sbjct: 1   MAFSASLSHNSFSCLTQFPQSFRRNXXXXXXXXLRFNPIRALKSTDPENKASETKTQQPP 60

Query: 61  XXXXXXXXXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYE 120
            XXXXXXXXXXXXXX     VYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYE
Sbjct: 61  MXXXXXXXXXXXXXXXXXXXVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYE 120

Query: 121 DRGEVLDLRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           DRGEVLD+RIFETGEYALIAWVG+PTAPAWLPTDMLIKSE LNYERL
Sbjct: 121 DRGEVLDIRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 167

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BLAST of Cla97C01G014350 vs. TrEMBL
Match: tr|A0A1S3B2K7|A0A1S3B2K7_CUCME (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485281 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.1e-63
Identity = 144/160 (90.00%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MAFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXXXX 60
           M FSASLSH+SFSCLTQFPQ+FRRNPLR H IRAVKSTEPEKKV     XXXXXXXXXXX
Sbjct: 1   MVFSASLSHNSFSCLTQFPQNFRRNPLRVHLIRAVKSTEPEKKVPETKTXXXXXXXXXXX 60

Query: 61  XXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 120
           XXXXXXXX   KPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPY+KGLDYIYEDRGEVLD
Sbjct: 61  XXXXXXXXXXXKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYFKGLDYIYEDRGEVLD 120

Query: 121 LRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           LRIFETGEYALIAWVGIPTAPAWLPT+MLIKSE LNYERL
Sbjct: 121 LRIFETGEYALIAWVGIPTAPAWLPTEMLIKSEKLNYERL 160

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BLAST of Cla97C01G014350 vs. TrEMBL
Match: tr|A0A0A0KHQ6|A0A0A0KHQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483310 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-58
Identity = 137/160 (85.62%), Postives = 141/160 (88.12%), Query Frame = 0


Query: 1   MAFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXXXX 60
           M FSAS SH+SFSCLTQFPQ+FRRNPLRFH IRAVKSTEPEKKVS     XXXXXXXXXX
Sbjct: 1   MVFSASFSHNSFSCLTQFPQNFRRNPLRFHLIRAVKSTEPEKKVSETKTQXXXXXXXXXX 60

Query: 61  XXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 120
           XXXXXXXX          KGQIVRVDKEKYLNSVNYLSVGHPPY+KGLDYIYEDRGEVLD
Sbjct: 61  XXXXXXXXXXXXXXXXXXKGQIVRVDKEKYLNSVNYLSVGHPPYFKGLDYIYEDRGEVLD 120

Query: 121 LRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           LRIFETGEYALIAWVGIPTAPAWLPT+MLIKSE LNYERL
Sbjct: 121 LRIFETGEYALIAWVGIPTAPAWLPTEMLIKSEKLNYERL 160

[Close]

BLAST of Cla97C01G014350 vs. TrEMBL
Match: tr|A0A2P4IZ71|A0A2P4IZ71_QUESU (Nad(P)h-quinone oxidoreductase subunit o, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_26805 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.1e-55
Identity = 112/160 (70.00%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 1   MAFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXXXX 60
           MAFSA+ S +SFSCL+Q P + RRNPLR   IRAVKSTEPEK+ +               
Sbjct: 1   MAFSATFSQNSFSCLSQLPHNLRRNPLRLPSIRAVKSTEPEKEKT--VETKSEESSVSNA 60

Query: 61  XXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 120
                     +KPVYSMKKGQIVRVDKEKYL+SVNYLSVGHPPYYKGLDYIYEDRGEVLD
Sbjct: 61  QPSTTPPKTPRKPVYSMKKGQIVRVDKEKYLSSVNYLSVGHPPYYKGLDYIYEDRGEVLD 120

Query: 121 LRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           +R FETGEYALI WVGIPTAPAWLPTDMLIKS+ LNYER+
Sbjct: 121 IRNFETGEYALIGWVGIPTAPAWLPTDMLIKSDKLNYERM 158

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BLAST of Cla97C01G014350 vs. TrEMBL
Match: tr|A0A2I4GLE9|A0A2I4GLE9_9ROSI (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Juglans regia OX=51240 GN=LOC109008900 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 119/161 (73.91%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 1   MAFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEP-EKKVSXXXXXXXXXXXXXX 60
           MAF+A LS SSFSCL++FP + RRNPLR   IRAVK+ EP E+K +        XXXXX 
Sbjct: 6   MAFTAVLSQSSFSCLSRFPPTSRRNPLRLQSIRAVKAAEPGEEKTT---QTKSEXXXXXN 65

Query: 61  XXXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120
                    + KKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL
Sbjct: 66  AQPSTKPSKLPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 125

Query: 121 DLRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           DLR+FETGEYALIAWVGIPTAPAWLPTDMLIKS+ L+YER+
Sbjct: 126 DLRLFETGEYALIAWVGIPTAPAWLPTDMLIKSDKLDYERM 163

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BLAST of Cla97C01G014350 vs. TrEMBL
Match: tr|A0A2P5E8X1|A0A2P5E8X1_9ROSA (NAD(P)H-quinone oxidoreductase subunit O OS=Trema orientalis OX=63057 GN=TorRG33x02_222100 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.3e-54
Identity = 111/160 (69.38%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 2   AFSASLSHSSFSCLTQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXXXXX 61
           AFSA+ S SSF C ++FP+  RRNPLR   IRAVKS EP+ +                  
Sbjct: 3   AFSATFSRSSFQCFSEFPERQRRNPLRLLTIRAVKSAEPDGETKAPDPKTTKVSSNAQPS 62

Query: 62  XXXXXXXVTK-KPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLD 121
                    K KPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGE+LD
Sbjct: 63  SATPKKLPKKEKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEILD 122

Query: 122 LRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           LRIFETGEYAL+AWVGIPTAPAWLPTDMLI+SE LNYERL
Sbjct: 123 LRIFETGEYALVAWVGIPTAPAWLPTDMLIESEKLNYERL 162

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BLAST of Cla97C01G014350 vs. Swiss-Prot
Match: sp|Q9S829|NDHO_ARATH (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhO PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.5e-45
Identity = 100/162 (61.73%), Postives = 114/162 (70.37%), Query Frame = 0


Query: 1   MAFSASLSH-SSFSCL-TQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXX 60
           MAFSA++S  SS S + +  P S RR P R  P   VK+   ++K S             
Sbjct: 1   MAFSATVSQLSSLSTISSSLPISSRRLPHRSLPQFTVKAEAEKEKQS----TQGKSDGEA 60

Query: 61  XXXXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEV 120
                     + KKPVYSMKKGQIVRV+KEKYLNS+NYLSVGHPP+YKGLDYIYEDRGEV
Sbjct: 61  SPAATKTPKTLPKKPVYSMKKGQIVRVEKEKYLNSINYLSVGHPPFYKGLDYIYEDRGEV 120

Query: 121 LDLRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           LDLR+FETGEYAL+ WVGIPTAPAWLPTDMLIK E L YER+
Sbjct: 121 LDLRVFETGEYALVGWVGIPTAPAWLPTDMLIKCEKLVYERM 158

[Close]

BLAST of Cla97C01G014350 vs. Swiss-Prot
Match: sp|Q7NFI1|NDHO_GLOVI (NAD(P)H-quinone oxidoreductase subunit O OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=ndhO PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.5e-06
Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 77  MKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALIAWVG 136
           +KKG +VR  ++K  NS+  L+       +   Y++E  GEVLD+R    G+YALI +  
Sbjct: 3   IKKGSLVRAVRDKLDNSLEALAND----TRWPSYLFETDGEVLDMR----GDYALIKFGA 62

Query: 137 IPTAPAWLPTDMLIKS 153
           +PT P WL  D L +S
Sbjct: 63  VPTPPVWLRQDQLAES 70

[Close]

BLAST of Cla97C01G014350 vs. Swiss-Prot
Match: sp|Q8DMU4|NDHO_THEEB (NAD(P)H-quinone oxidoreductase subunit O OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=ndhO PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.7e-05
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 76  SMKKGQIVRVDKEKYLNSVNYLSVGH--PPYYKGLDYIYEDRGEVLDLRIFETGEYALIA 135
           ++KKG +V+V  EK  NS+  L+  H  PP      Y++E RGEV+D+R    G+YA I 
Sbjct: 2   AIKKGDLVKVVAEKLANSLEALASDHRYPP------YLFEGRGEVVDIR----GDYAQIK 61

Query: 136 WVGIPTAPAWLPTDML 150
           +  +PT   WL  D L
Sbjct: 62  F-PVPTPTVWLRLDQL 66

[Close]

BLAST of Cla97C01G014350 vs. Swiss-Prot
Match: sp|Q117D1|NDHO_TRIEI (NAD(P)H-quinone oxidoreductase subunit O OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ndhO PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.4e-04
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 77  MKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALIAWVG 136
           +KKG +VRV +EK  NS+   +  +    +   YI+E +GE++D R    G+YA I +  
Sbjct: 4   IKKGSLVRVVREKLENSLEAKASDN----RFPAYIFESQGEIVDTR----GDYAFIKFGK 63

Query: 137 IPTAPAWLPTDMLIKSE 154
           +PT   WL  D L K E
Sbjct: 64  VPTPNIWLRLDQLEKFE 72

[Close]

BLAST of Cla97C01G014350 vs. Swiss-Prot
Match: sp|B2J5F9|NDHO_NOSP7 (NAD(P)H-quinone oxidoreductase subunit O OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=ndhO PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.0e-04
Identity = 26/76 (34.21%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 76  SMKKGQIVRVDKEKYLNSVNYLS--VGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALIA 135
           ++KKG +VR  +EK  NS+   +     PP      Y+++ +GE++D++    G+YALI 
Sbjct: 2   AVKKGDMVRAIREKLENSLEAKASDTRFPP------YLFDSKGEIVDIK----GDYALIK 61

Query: 136 WVGIPTAPAWLPTDML 150
           +  +PT   WL  D L
Sbjct: 62  FGKVPTPNVWLRVDQL 67

[Close]

BLAST of Cla97C01G014350 vs. TAIR10
Match: AT1G74880.1 (NAD(P)H:plastoquinone dehydrogenase complex subunit O)

HSP 1 Score: 182.6 bits (462), Expect = 2.0e-46
Identity = 100/162 (61.73%), Postives = 114/162 (70.37%), Query Frame = 0


Query: 1   MAFSASLSH-SSFSCL-TQFPQSFRRNPLRFHPIRAVKSTEPEKKVSXXXXXXXXXXXXX 60
           MAFSA++S  SS S + +  P S RR P R  P   VK+   ++K S             
Sbjct: 1   MAFSATVSQLSSLSTISSSLPISSRRLPHRSLPQFTVKAEAEKEKQS----TQGKSDGEA 60

Query: 61  XXXXXXXXXXVTKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEV 120
                     + KKPVYSMKKGQIVRV+KEKYLNS+NYLSVGHPP+YKGLDYIYEDRGEV
Sbjct: 61  SPAATKTPKTLPKKPVYSMKKGQIVRVEKEKYLNSINYLSVGHPPFYKGLDYIYEDRGEV 120

Query: 121 LDLRIFETGEYALIAWVGIPTAPAWLPTDMLIKSENLNYERL 161
           LDLR+FETGEYAL+ WVGIPTAPAWLPTDMLIK E L YER+
Sbjct: 121 LDLRVFETGEYALVGWVGIPTAPAWLPTDMLIKCEKLVYERM 158

The following BLAST results are available for this feature:

BLAST of Cla97C01G014350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441053.1	1.2e-62	90.00	PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucumis melo...	[more]
XP_022977966.1	2.1e-62	85.63	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Cucurbita ma...	[more]
XP_022950243.1	6.1e-62	85.00	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita moschata]	[more]
XP_022132588.1	3.9e-61	86.25	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Momordica charantia]	[more]
XP_023544121.1	2.2e-59	81.44	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita pepo subsp. p...	[more]

BLAST of Cla97C01G014350 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B2K7\|A0A1S3B2K7_CUCME	8.1e-63	90.00	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A0A0KHQ6\|A0A0A0KHQ6_CUCSA	1.2e-58	85.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483310 PE=4 SV=1	[more]
tr\|A0A2P4IZ71\|A0A2P4IZ71_QUESU	8.1e-55	70.00	Nad(P)h-quinone oxidoreductase subunit o, chloroplastic OS=Quercus suber OX=5833...	[more]
tr\|A0A2I4GLE9\|A0A2I4GLE9_9ROSI	1.1e-54	73.91	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Juglans regia OX=5124...	[more]
tr\|A0A2P5E8X1\|A0A2P5E8X1_9ROSA	5.3e-54	69.38	NAD(P)H-quinone oxidoreductase subunit O OS=Trema orientalis OX=63057 GN=TorRG33...	[more]

BLAST of Cla97C01G014350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9S829\|NDHO_ARATH	3.5e-45	61.73	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Arabidopsis thaliana ...	[more]
sp\|Q7NFI1\|NDHO_GLOVI	5.5e-06	39.47	NAD(P)H-quinone oxidoreductase subunit O OS=Gloeobacter violaceus (strain PCC 74...	[more]
sp\|Q8DMU4\|NDHO_THEEB	2.7e-05	40.79	NAD(P)H-quinone oxidoreductase subunit O OS=Thermosynechococcus elongatus (strai...	[more]
sp\|Q117D1\|NDHO_TRIEI	1.4e-04	37.66	NAD(P)H-quinone oxidoreductase subunit O OS=Trichodesmium erythraeum (strain IMS...	[more]
sp\|B2J5F9\|NDHO_NOSP7	3.0e-04	34.21	NAD(P)H-quinone oxidoreductase subunit O OS=Nostoc punctiforme (strain ATCC 2913...	[more]

BLAST of Cla97C01G014350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74880.1	2.0e-46	61.73	NAD(P)H:plastoquinone dehydrogenase complex subunit O	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005886	plasma membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor

Vocabulary: **INTERPRO**
Term	Definition
IPR020905	NdhO

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G014350.1	Cla97C01G014350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020905	NAD(P)H-quinone oxidoreductase subunit O	PFAM	PF11910	NdhO	coord: 77..151 e-value: 1.9E-29 score: 101.5
IPR020905	NAD(P)H-quinone oxidoreductase subunit O	PANTHER	PTHR36728	FAMILY NOT NAMED	coord: 1..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..49
None	No IPR available	PANTHER	PTHR36728:SF2	NAD P H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC	coord: 1..160

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G014350	Cla008430	Watermelon (97103) v1	wmwmbB244
Cla97C01G014350	Csa6G483310	Cucumber (Chinese Long) v2	cuwmbB412
Cla97C01G014350	MELO3C008059	Melon (DHL92) v3.5.1	mewmbB516
Cla97C01G014350	ClCG01G015390	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G014350	CSPI06G26400	Wild cucumber (PI 183967)	cpiwmbB433
Cla97C01G014350	Cucsa.100900	Cucumber (Gy14) v1	cgywmbB127
Cla97C01G014350	CmaCh03G010980	Cucurbita maxima (Rimu)	cmawmbB670
Cla97C01G014350	CmoCh03G010830	Cucurbita moschata (Rifu)	cmowmbB642
Cla97C01G014350	Lsi01G011570	Bottle gourd (USVL1VR-Ls)	lsiwmbB115
Cla97C01G014350	CsGy6G025890	Cucumber (Gy14) v2	cgybwmbB394
Cla97C01G014350	MELO3C008059.2	Melon (DHL92) v3.6.1	medwmbB508
Cla97C01G014350	Carg10531	Silver-seed gourd	carwmbB0239
Cla97C01G014350	CsaV3_6G041610	Cucumber (Chinese Long) v3	cucwmbB430
Cla97C01G014350	Bhi03G001039	Wax gourd	wgowmbB399

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G014350	Silver-seed gourd	carwmbB0839
Cla97C01G014350	Cucurbita maxima (Rimu)	cmawmbB875
Cla97C01G014350	Cucurbita moschata (Rifu)	cmowmbB849