Cla97C01G013950 (gene) Watermelon (97103) v2

Overview
NameCla97C01G013950
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionTranscription termination factor family protein
LocationCla97Chr01 : 27755177 .. 27757500 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATTCATCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCAATTCCCTGTCCTCTCCAATTCCAGAATCTCTTTCGTCCTCCCCTCCAAACTCCCCCCTCGCAACCCCAGCATTCCTCCCCTCTCCCCCCCGCTCCCCCCTCCTCCGCCACACAACGACCACCACTCCGAATTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCCGCCTCCCTTCCCGACATCAGATCAGCCGTTGATTTCATGACCTCCATGAATTTCACCGCCCTCGAGTTCCGTCGAATCGTCGGTATGTGCCCCGAGATTCTCACCTCTCGCGCTTCCGACCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGCGCCGATATCAAACGCGTTATCAATCGACGCCCTAGATTGCTCGCGTGCAGCGTAAAAGATCGACTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACTTCCTTACTCTCCTGTAGCGTGGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAAAACCTAGGGTTTTCTCGGCGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTCTGCTATAGCATAAAGGAGAATCTGGAGCCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAGGAATTGAAGGAATTTCCTCATTACTTTTCGTTTAGCTTAGAGAACAGGATCAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAACCAGTGAGATGAAATTCCGGGAGAAATTAGAGGTATGTTGTGATTCTTCAATACCCTTTAGAACTTCTCCTTTGTGGTGTACAAAATTGTGATATTCAAATTTCTCAATCAAGTATAGAGTTCATTTTCCATAGCTCTGCTTCTGTTTCTCTCTTCATTTTTGTGCTTTGAATTTCAATTCTGCTCTAATTATCCCTTTGGGTCCTTACAGTTAGATTAAAGGTTTAGTATAAGTTTTGGGCTGATTATCCCATATGAATTTATGTTCTAATCCATATATTTTCTTCTTTAGTTGGGGGAAGAATCCGATCTTCTTTAAACACAATATTTTTGAATTTGTTGAGGTTAGACTTTAGAGGTAGAGTTCCTTAGTTTTTTTTAGTATAGTTTCCATCTAGTCTTTTTTTTATTTATTTATTATTTATTATTTTTAGTTTAATTAGTTTAATTTTCATTTAGTGAAAGTTTTAAAATATTATGTTTTTATTTTTTAATTTAGTTCCATATGGTTTCAAATTTTCAAATTTTCAAATTTTCAAAATTATTTAAAATTCTATTTATGAGTTTTCACTACGGCTTTTTTTTTTTTTTTTTATGTTAATTTGTAGTTAATTAATTTAAAATAATGTCAAAATTTTTAATTAATTTTAATAGGAATGGAAATGTGCGTAAACTAATTTAATTTTTTAAATTAACTCATAGATTAACACAATAAAGATAAATCTTGAAAGATAGAAACCAAATGAAAGCAAATTTCAAAATTCAAGGGTTAAAATGTAACTATACCTTTTTTGGGAGGTGTTTAAAGCACTAATTTGAAGATGGTGGAGTGGTTTATTATAATTCAATCTATGTTTTTACAACTATTTATAACCTGCAATTAAACATTGTAAATACTAGCACAATTGTTTTAAATGATAAAACTGTTGGAAATATTTACAAATATAATAAAATGTCACTATCTATGAGTGATAGACAACGATAGACACTAATAGACATTTATTAATATCTATCACTAATAGATAATAATAAATGGTAGTAGTCTATCAGTGTCTATCGTGATAAGACATGATATTTTGCTATATTTGTAAATATTTTGACTTATTGTGCTATATTTGAAAACAATCATAAATACTATTTCAAAGACTTCTTTGTTATAATATTTACTATTACCCACTAATTCTCTCTCTCTTTTTTCTTTGCAATAGTTTGCCACTCAAACTCAGACTATTATAACCTCATGCCTTAAACGCAAACTATTATAACTCATCAAACTATAATATTCACTGACTACTCTTAACGCCACTTAAAACGTGGAATAAATTGAGGTTGTTTTAGGAGTGTTTCTTTTTTTTTAAAACGTGGTTTTTCTTTTTTTTTTTTTTTTTTTTTTAAGCAGCAGTGGGAGTGGGAGTGA

mRNA sequence

ATGGCGGATTCATCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCAATTCCCTGTCCTCTCCAATTCCAGAATCTCTTTCGTCCTCCCCTCCAAACTCCCCCCTCGCAACCCCAGCATTCCTCCCCTCTCCCCCCCGCTCCCCCCTCCTCCGCCACACAACGACCACCACTCCGAATTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCCGCCTCCCTTCCCGACATCAGATCAGCCGTTGATTTCATGACCTCCATGAATTTCACCGCCCTCGAGTTCCGTCGAATCGTCGGTATGTGCCCCGAGATTCTCACCTCTCGCGCTTCCGACCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGCGCCGATATCAAACGCGTTATCAATCGACGCCCTAGATTGCTCGCGTGCAGCGTAAAAGATCGACTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACTTCCTTACTCTCCTGTAGCGTGGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAAAACCTAGGGTTTTCTCGGCGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTCTGCTATAGCATAAAGGAGAATCTGGAGCCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAGGAATTGAAGGAATTTCCTCATTACTTTTCGTTTAGCTTAGAGAACAGGATCAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAACCAGTGAGATGAAATTCCGGGAGAAATTAGAGCAGTGGGAGTGGGAGTGA

Coding sequence (CDS)

ATGGCGGATTCATCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTTTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCAATTCCCTGTCCTCTCCAATTCCAGAATCTCTTTCGTCCTCCCCTCCAAACTCCCCCCTCGCAACCCCAGCATTCCTCCCCTCTCCCCCCCGCTCCCCCCTCCTCCGCCACACAACGACCACCACTCCGAATTTCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCCGCCTCCCTTCCCGACATCAGATCAGCCGTTGATTTCATGACCTCCATGAATTTCACCGCCCTCGAGTTCCGTCGAATCGTCGGTATGTGCCCCGAGATTCTCACCTCTCGCGCTTCCGACCTCATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGCGCCGATATCAAACGCGTTATCAATCGACGCCCTAGATTGCTCGCGTGCAGCGTAAAAGATCGACTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACTTCCTTACTCTCCTGTAGCGTGGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAAAACCTAGGGTTTTCTCGGCGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTCTGCTATAGCATAAAGGAGAATCTGGAGCCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAGGAATTGAAGGAATTTCCTCATTACTTTTCGTTTAGCTTAGAGAACAGGATCAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAACCAGTGAGATGAAATTCCGGGAGAAATTAGAGCAGTGGGAGTGGGAGTGA

Protein sequence

MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKLPPRNPSIPPLSPPLPPPPPHNDHHSEFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKLEQWEWE
Homology
[Close]
BLAST of Cla97C01G013950 vs. NCBI nr
Match: XP_016902903.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo])

HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132
Identity = 299/318 (94.03%), Postives = 304/318 (95.60%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKXXXXXXXXXX 60
           MADSSLHLLSNGGFI HSSPSPLFPSLPR RTL FPVLSNSR SF+ PSK    XXXXXX
Sbjct: 57  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRXXXXXX 116

Query: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           XXXXXXXXXXXXXXXX  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 117 XXXXXXXXXXXXXXXXDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 176

Query: 121 NFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKD 180
           NFTALEFRRIVGMCPE+LTSRASDLIPIFTFLLREARVDG+DIKRVINRRPRLLACSVKD
Sbjct: 177 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 236

Query: 181 RLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240
           +LRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXX  RDALIMFRRFPQLF
Sbjct: 237 QLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXCRRDALIMFRRFPQLF 296

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 297 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 356

Query: 301 LKTSEMKFREKLEQWEWE 319
           LK+SEMKFREKLE WEWE
Sbjct: 357 LKSSEMKFREKLEPWEWE 374

[Close]
BLAST of Cla97C01G013950 vs. NCBI nr
Match: XP_011657725.1 (PREDICTED: transcription factor E2FA-like isoform X1 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 6.7e-129
Identity = 300/314 (95.54%), Postives = 305/314 (97.13%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKXXXXXXXXXX 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSNSR SF+ PSK   XXXXXXX
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPEILTSRAS LIPIFTFLLREARVDG+DIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 RLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240
           +LRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKTSEMKFREKLEQ 315
           LK+SEMKFREKLE+
Sbjct: 301 LKSSEMKFREKLEK 314

[Close]
BLAST of Cla97C01G013950 vs. NCBI nr
Match: XP_011657726.1 (PREDICTED: transcription factor E2FA-like isoform X2 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 6.7e-129
Identity = 300/314 (95.54%), Postives = 305/314 (97.13%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKXXXXXXXXXX 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSNSR SF+ PSK   XXXXXXX
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPEILTSRAS LIPIFTFLLREARVDG+DIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 RLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240
           +LRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKTSEMKFREKLEQ 315
           LK+SEMKFREKLE+
Sbjct: 301 LKSSEMKFREKLEK 314

[Close]
BLAST of Cla97C01G013950 vs. NCBI nr
Match: XP_011657727.1 (PREDICTED: transcription factor E2FA-like isoform X3 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 6.7e-129
Identity = 300/314 (95.54%), Postives = 305/314 (97.13%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKXXXXXXXXXX 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSNSR SF+ PSK   XXXXXXX
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPEILTSRAS LIPIFTFLLREARVDG+DIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 RLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240
           +LRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKTSEMKFREKLEQ 315
           LK+SEMKFREKLE+
Sbjct: 301 LKSSEMKFREKLEK 314

[Close]
BLAST of Cla97C01G013950 vs. NCBI nr
Match: KGN48296.1 (hypothetical protein Csa_6G454440 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 2.4e-118
Identity = 258/313 (82.43%), Postives = 262/313 (83.71%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKXXXXXXXXXX 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSNSR SF+ PSK   XXXXXXX
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPEILTSRAS LIPIFTFLLREARVDG+DIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 RLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240
           +LRPTLYFLQSIGISE                                          LF
Sbjct: 181 QLRPTLYFLQSIGISE------------------------------------------LF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 271

Query: 301 LKTSEMKFREKLE 314
           LK+SEMKFREKLE
Sbjct: 301 LKSSEMKFREKLE 271

[Close]
BLAST of Cla97C01G013950 vs. TrEMBL
Match: tr|A0A1S4E3U8|A0A1S4E3U8_CUCME (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107991918 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 8.6e-133
Identity = 299/318 (94.03%), Postives = 304/318 (95.60%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKXXXXXXXXXX 60
           MADSSLHLLSNGGFI HSSPSPLFPSLPR RTL FPVLSNSR SF+ PSK    XXXXXX
Sbjct: 57  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRXXXXXX 116

Query: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           XXXXXXXXXXXXXXXX  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 117 XXXXXXXXXXXXXXXXDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 176

Query: 121 NFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKD 180
           NFTALEFRRIVGMCPE+LTSRASDLIPIFTFLLREARVDG+DIKRVINRRPRLLACSVKD
Sbjct: 177 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 236

Query: 181 RLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240
           +LRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXX  RDALIMFRRFPQLF
Sbjct: 237 QLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXCRRDALIMFRRFPQLF 296

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 297 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 356

Query: 301 LKTSEMKFREKLEQWEWE 319
           LK+SEMKFREKLE WEWE
Sbjct: 357 LKSSEMKFREKLEPWEWE 374

[Close]
BLAST of Cla97C01G013950 vs. TrEMBL
Match: tr|A0A0A0KKL6|A0A0A0KKL6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454440 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.6e-118
Identity = 258/313 (82.43%), Postives = 262/313 (83.71%), Query Frame = 0 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKXXXXXXXXXX 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTL FPVLSNSR SF+ PSK   XXXXXXX
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  XXXXXXXXXXXXXXXXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTALEFRRIVGMCPEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPEILTSRAS LIPIFTFLLREARVDG+DIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 RLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLF 240
           +LRPTLYFLQSIGISE                                          LF
Sbjct: 181 QLRPTLYFLQSIGISE------------------------------------------LF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 271

Query: 301 LKTSEMKFREKLE 314
           LK+SEMKFREKLE
Sbjct: 301 LKSSEMKFREKLE 271

[Close]
BLAST of Cla97C01G013950 vs. TrEMBL
Match: tr|A0A061EUD0|A0A061EUD0_THECC (Mitochondrial transcription termination factor family protein OS=Theobroma cacao OX=3641 GN=TCM_022856 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83
Identity = 206/299 (68.90%), Postives = 239/299 (79.93%), Query Frame = 0 

Query: 15  IHHSSPSPLFPSLPRSRTLQFPVLSNSRISFVLPSKXXXXXXXXXXXXXXXXXXXXXXXX 74
           +HH      FPSL R R L FP  S+  I+  LP        XXXXXXXXXXXXX     
Sbjct: 21  LHHHKHHD-FPSLSRPRNLHFPTFSSKTITIPLP--------XXXXXXXXXXXXXPPPSS 80

Query: 75  XXXXQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMC 134
               QEKML+LDSIG+DF S+I+ HPP+ + SL D++S VDF+TS NF+ LE RRI+ MC
Sbjct: 81  HSDFQEKMLYLDSIGLDFFSLIQHHPPIITTSLNDLKSTVDFLTSFNFSTLELRRILSMC 140

Query: 135 PEILTSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGI 194
           PEILT+  + L+PIFTFL REARV+G+D+K+VINRRPRLL C+V+ +LRPTLYFLQ+IGI
Sbjct: 141 PEILTTNPTSLLPIFTFLFREARVNGSDLKKVINRRPRLLTCNVETQLRPTLYFLQNIGI 200

Query: 195 SEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPKLNY 254
           SEVXXXXXXXXXXXXXXXXXXXXXXXXXXXX R  + MFRRFPQLF YS+KEN EPKLNY
Sbjct: 201 SEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRQTISMFRRFPQLFNYSVKENYEPKLNY 260

Query: 255 FVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKLE 314
           FVVEMGR+LKELKEFP Y SFSLENRIKPRHQ C+EKGVCFPLP LL+TSE++FR +LE
Sbjct: 261 FVVEMGRDLKELKEFPQYLSFSLENRIKPRHQCCIEKGVCFPLPVLLRTSEVEFRNRLE 310

[Close]
BLAST of Cla97C01G013950 vs. TrEMBL
Match: tr|A0A067FWQ6|A0A067FWQ6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g037691mg PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.9e-81
Identity = 154/235 (65.53%), Postives = 182/235 (77.45%), Query Frame = 0 

Query: 79  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEIL 138
           QEKML+LDSIG+DF S+I DHPP+ SASL DI+S VD +TS++F A EFRRIV MCPEIL
Sbjct: 85  QEKMLYLDSIGVDFFSLINDHPPIVSASLNDIKSTVDLITSLDFAAAEFRRIVSMCPEIL 144

Query: 139 TSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVX 198
           TSRASD++P+FTFLLREA+V+G+D+KRVI+RRPRLL  +VK RLRPTLYFLQS+GI+EV 
Sbjct: 145 TSRASDILPVFTFLLREAKVNGSDLKRVISRRPRLLVSAVKTRLRPTLYFLQSMGIAEVN 204

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPKLNYFVVE 258
                                       R+A  MFRRFPQLF YS+K+N E KLNYFVV 
Sbjct: 205 KHTYLLSCSVEDKLIPRLQYFQKIGFSKREATAMFRRFPQLFNYSVKDNYERKLNYFVVG 264

Query: 259 MGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKLE 314
           MGR+LKELKEFP YFSFSLENRIKPRHQ+CV+KGVCFPL  LLKTSE +F  +L+
Sbjct: 265 MGRDLKELKEFPQYFSFSLENRIKPRHQACVDKGVCFPLNVLLKTSEAQFHRRLD 319

[Close]
BLAST of Cla97C01G013950 vs. TrEMBL
Match: tr|A0A1U8K4D2|A0A1U8K4D2_GOSHI (uncharacterized protein LOC107913339 OS=Gossypium hirsutum OX=3635 GN=LOC107913339 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 199/291 (68.38%), Postives = 233/291 (80.07%), Query Frame = 0 

Query: 24  FPSLPRSRTLQFPVLSNSRIS-FVLPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKM 83
           FP L R + L FP  S+  I+   LP K            XXXXXXXXXXX     QEKM
Sbjct: 34  FPLLSRPKNLHFPTFSSRTITPTSLPPK--PHPKIPQIPSXXXXXXXXXXXSHSDFQEKM 93

Query: 84  LFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEILTSRA 143
           L+L+SIG+DF S+I+ HPP+  ASL D++S VDF+ SM+FT LE RRI+ MCP ILT ++
Sbjct: 94  LYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASMSFTTLELRRILSMCPHILTVKS 153

Query: 144 SDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVXXXXX 203
           + L+PIFTFLLREA V+G+D+K+VINRRPRLLAC+V+ +LRPTLYFLQSIGISEVXXXXX
Sbjct: 154 TSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVXXXXX 213

Query: 204 XXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRE 263
           XXXXXXXXXXXXXXXXXXXXXXXXR  + MF RFP LF YSIKEN E KLNYF+VEMGR+
Sbjct: 214 XXXXXXXXXXXXXXXXXXXXXXXXRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRD 273

Query: 264 LKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKLE 314
           L+E++EFP YFSFSLENRIKPRHQ CVEKGVCFPLP LLKTSE++F  +LE
Sbjct: 274 LREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFCSRLE 322

[Close]
BLAST of Cla97C01G013950 vs. Swiss-Prot
Match: sp|Q84X53|MTEF1_ARATH (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-19
Identity = 68/240 (28.33%), Postives = 106/240 (44.17%), Query Frame = 0 

Query: 79  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEIL 138
           +EK+++L  + +D    ++ +P + SA +  + S    ++S   +     RI+ M P++L
Sbjct: 34  REKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLL 93

Query: 139 TS-RASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGI--- 198
           TS   S+++P+  FL  E  +   DI + I+R PRLL  SV  +LRP L FL+++G    
Sbjct: 94  TSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR 153

Query: 199 --SEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPKL 258
                                              +   M                    
Sbjct: 154 DTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVXXXXXXXXXXXXXXXXXX 213

Query: 259 NYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKL 313
                 M  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   L
Sbjct: 214 XXXXXXMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHWL 273

[Close]
BLAST of Cla97C01G013950 vs. Swiss-Prot
Match: sp|F4IHL3|MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.1e-11
Identity = 54/165 (32.73%), Postives = 74/165 (44.85%), Query Frame = 0 

Query: 156 ARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXX 215
           A V   DI +VI   P LL CS+  +L P + +  S+GI                     
Sbjct: 471 AGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE-------------- 530

Query: 216 XXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSF 275
                           M   FP L  Y++ +NL PK  Y    M R L++L EFP +FS+
Sbjct: 531 ----------------MIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSY 590

Query: 276 SLENRIKPRHQSCVEKGVCFPLPELLKTSEMKF----REKLEQWE 317
           SLE RI PRH   VE  V F L  +L  ++ +F    R+K+E+ E
Sbjct: 591 SLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRVRDKVERRE 604

[Close]
BLAST of Cla97C01G013950 vs. Swiss-Prot
Match: sp|Q9FK23|MTEF8_ARATH (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.3e-10
Identity = 61/230 (26.52%), Postives = 106/230 (46.09%), Query Frame = 0 

Query: 94  SVIKDHPPVASASLPDIRSAVDFMTSM-NFTALEFRRIVGMCPEIL-TSRASDLIPIFTF 153
           +V++  P + S S+  +   V+F+ S    T+ +  +IV + P ++ TS+   L P   F
Sbjct: 270 TVLRRLPAILSYSVEHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEF 329

Query: 154 LLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIG----ISEVXXXXXXXXXX 213
            L+E   D   + + +++ P +LA S ++ L   L FL  IG      E+          
Sbjct: 330 -LKECGFDSPGMFKFLSKAPLILALS-ENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRT 389

Query: 214 XXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELK 273
                               D L M  + PQ+  Y+   +LE KL Y +  MGRE++EL 
Sbjct: 390 SSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNY-TSLEEKLEYLIEYMGREVEELL 449

Query: 274 EFPHYFSFSLENRIKPRHQSCVE-KGVCFPLPELLKTSEMKFREKLEQWE 317
            FP +  + L++RIK R++  ++ +G    L +LL  S  +F +  +  E
Sbjct: 450 AFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFSKAADNIE 496

[Close]
BLAST of Cla97C01G013950 vs. Swiss-Prot
Match: sp|F4JVI3|MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-08
Identity = 31/84 (36.90%), Postives = 51/84 (60.71%), Query Frame = 0 

Query: 231 IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE 290
           IM  R+  L+ +S+KEN+ PK +YF   M     EL +FP +F +SL+ RIKPR++    
Sbjct: 391 IMISRYGALYTFSLKENVMPKWDYFQT-MDYPKSELVKFPQFFGYSLQERIKPRYELVQR 450

Query: 291 KGVCFPLPELLKTSEMKFREKLEQ 315
            GV   L ++L  S ++F + +++
Sbjct: 451 SGVRLLLNQVLSLSGIEFEKVVKK 473

[Close]
BLAST of Cla97C01G013950 vs. Swiss-Prot
Match: sp|Q6AUK6|MTEF4_ORYSJ (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07
Identity = 29/77 (37.66%), Postives = 48/77 (62.34%), Query Frame = 0 

Query: 237 PQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFP 296
           PQL   ++ + ++    YF  EM R+L+EL EFP +F++ LE+ ++PRH+   +KG    
Sbjct: 385 PQLLALNM-DIMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHEMVAKKGFTCS 444

Query: 297 LPELLKTSEMKFREKLE 314
           L  LL  S+ KF E+++
Sbjct: 445 LAWLLNCSDAKFDERMK 460

[Close]
BLAST of Cla97C01G013950 vs. TAIR10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 245.0 bits (624), Expect = 6.4e-65
Identity = 152/238 (63.87%), Postives = 185/238 (77.73%), Query Frame = 0 

Query: 80  EKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTS--MNFTALEFRRIVGMCPEI 139
           EK+++LDS+GIDFL++I  HPP+ S +L  + S VD+MT+  +NFT  +FRR+V MCPE+
Sbjct: 75  EKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPEL 134

Query: 140 LTS-RASDLIPIFTFLLREARVDGA-DIKRVINRRPRLLACSVKDRLRPTLYFLQSIGIS 199
           LTS   S  IP+ TFLLRE  VD   D+++ + RRPRLLACSV  +LRPTLYFLQ IGI 
Sbjct: 135 LTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGIL 194

Query: 200 EVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPKLNYF 259
           +    XXXXXXXXXXXXXXXXXXXXXXXX  R A  MF+RFPQLF YSI EN EPKL Y 
Sbjct: 195 DPHKHXXXXXXXXXXXXXXXXXXXXXXXXSRRSATAMFKRFPQLFNYSIAENYEPKLKYL 254

Query: 260 VVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKLE 314
           +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  KGV FPLP +LKT+E  FR+ LE
Sbjct: 255 MVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFRDTLE 312

[Close]
BLAST of Cla97C01G013950 vs. TAIR10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 112.1 bits (279), Expect = 6.4e-25
Identity = 96/239 (40.17%), Postives = 135/239 (56.49%), Query Frame = 0 

Query: 79  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEIL 138
           +EK+L L+ +GID    +  +P + SA L  I+S + F+ S      +  RI+GMCP+IL
Sbjct: 56  KEKILCLELMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKIL 115

Query: 139 TSRA-SDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEV 198
           TS   ++L P+F FL  +  V                               Q +G+ ++
Sbjct: 116 TSDVRTELYPVFMFLSNDLHVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 175

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALI----MFRRFPQLFCYSIKENLEPKLN 258
                 XXXXXXXXXXXXXXXXXXXXXXX         M  R P LF +SI+ N +PKL+
Sbjct: 176 EALAYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMILRCPALFTFSIENNFKPKLD 235

Query: 259 YFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKL 313
           YF+ E+  +L+ LKEFP YF+FSLE RIKPRH   +E+G+  PL  +LK+++ +F + L
Sbjct: 236 YFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFEQLL 294

[Close]
BLAST of Cla97C01G013950 vs. TAIR10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 108.6 bits (270), Expect = 7.1e-24
Identity = 74/240 (30.83%), Postives = 115/240 (47.92%), Query Frame = 0 

Query: 79  QEKMLFLDSIGIDFLSVIKDHPPVA--SASLPDIRSAVDFMTSMNFTALEFRRIVGMCPE 138
           +E +  L S+GI     +  +P +A  +  L  I SAV+ + S   +  +F R+V +CP+
Sbjct: 37  RENLRHLSSLGI-----VPQNPRLAPPANDLSVILSAVNLLKSKGISDEDFPRLVFLCPQ 96

Query: 139 IL--TSRASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGI 198
           +   T   S L P+F FL  E      + + +I   P +L   V+  LRPTL +L+ +G+
Sbjct: 97  LFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNILFSDVEYCLRPTLVYLKELGV 156

Query: 199 ---SEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPK 258
              +                                +A  +  R P +F YS+++NL PK
Sbjct: 157 RNLNRASKTNAHVLNTRVEKLRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPK 216

Query: 259 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREK 312
             + V +M REL+ELK+FP YF+FSL  RI+PRH    +K V   L  +L   + KF  K
Sbjct: 217 FEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGDQKFYSK 271

[Close]
BLAST of Cla97C01G013950 vs. TAIR10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 99.0 bits (245), Expect = 5.6e-21
Identity = 68/240 (28.33%), Postives = 106/240 (44.17%), Query Frame = 0 

Query: 79  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTALEFRRIVGMCPEIL 138
           +EK+++L  + +D    ++ +P + SA +  + S    ++S   +     RI+ M P++L
Sbjct: 33  REKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLL 92

Query: 139 TS-RASDLIPIFTFLLREARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGI--- 198
           TS   S+++P+  FL  E  +   DI + I+R PRLL  SV  +LRP L FL+++G    
Sbjct: 93  TSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR 152

Query: 199 --SEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPKL 258
                                              +   M                    
Sbjct: 153 DTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVXXXXXXXXXXXXXXXXXX 212

Query: 259 NYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKTSEMKFREKL 313
                 M  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   L
Sbjct: 213 XXXXXXMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHWL 272

[Close]
BLAST of Cla97C01G013950 vs. TAIR10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-12
Identity = 54/165 (32.73%), Postives = 74/165 (44.85%), Query Frame = 0 

Query: 156 ARVDGADIKRVINRRPRLLACSVKDRLRPTLYFLQSIGISEVXXXXXXXXXXXXXXXXXX 215
           A V   DI +VI   P LL CS+  +L P + +  S+GI                     
Sbjct: 471 AGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGE-------------- 530

Query: 216 XXXXXXXXXXXRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSF 275
                           M   FP L  Y++ +NL PK  Y    M R L++L EFP +FS+
Sbjct: 531 ----------------MIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSY 590

Query: 276 SLENRIKPRHQSCVEKGVCFPLPELLKTSEMKF----REKLEQWE 317
           SLE RI PRH   VE  V F L  +L  ++ +F    R+K+E+ E
Sbjct: 591 SLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRVRDKVERRE 604

The following BLAST results are available for this feature:
BLAST of Cla97C01G013950 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902903.11.3e-13294.03PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo][more]
XP_011657725.16.7e-12995.54PREDICTED: transcription factor E2FA-like isoform X1 [Cucumis sativus][more]
XP_011657726.16.7e-12995.54PREDICTED: transcription factor E2FA-like isoform X2 [Cucumis sativus][more]
XP_011657727.16.7e-12995.54PREDICTED: transcription factor E2FA-like isoform X3 [Cucumis sativus][more]
KGN48296.12.4e-11882.43hypothetical protein Csa_6G454440 [Cucumis sativus][more]
BLAST of Cla97C01G013950 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E3U8|A0A1S4E3U8_CUCME8.6e-13394.03transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0KKL6|A0A0A0KKL6_CUCSA1.6e-11882.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454440 PE=4 SV=1[more]
tr|A0A061EUD0|A0A061EUD0_THECC2.8e-8368.90Mitochondrial transcription termination factor family protein OS=Theobroma cacao... [more]
tr|A0A067FWQ6|A0A067FWQ6_CITSI5.9e-8165.53Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g037691m... [more]
tr|A0A1U8K4D2|A0A1U8K4D2_GOSHI3.0e-7768.38uncharacterized protein LOC107913339 OS=Gossypium hirsutum OX=3635 GN=LOC1079133... [more]
BLAST of Cla97C01G013950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84X53|MTEF1_ARATH1.0e-1928.33Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
sp|F4IHL3|MTEF2_ARATH5.1e-1132.73Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
sp|Q9FK23|MTEF8_ARATH4.3e-1026.52Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O... [more]
sp|F4JVI3|MTEF5_ARATH6.8e-0836.90Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
sp|Q6AUK6|MTEF4_ORYSJ1.2e-0737.66Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja... [more]
BLAST of Cla97C01G013950 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G36000.16.4e-6563.87Mitochondrial transcription termination factor family protein[more]
AT2G34620.16.4e-2540.17Mitochondrial transcription termination factor family protein[more]
AT3G18870.17.1e-2430.83Mitochondrial transcription termination factor family protein[more]
AT2G03050.15.6e-2128.33Mitochondrial transcription termination factor family protein[more]
AT2G21710.12.8e-1232.73Mitochondrial transcription termination factor family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006260 DNA replication
biological_process GO:0044763 single-organism cellular process
biological_process GO:0007049 cell cycle
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0044711 single-organism biosynthetic process
biological_process GO:0032502 developmental process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G013950.1Cla97C01G013950.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 128..159
e-value: 7.3
score: 15.5
coord: 230..262
e-value: 2.0E-5
score: 34.0
coord: 263..294
e-value: 0.0022
score: 27.2
coord: 164..195
e-value: 1.3E-5
score: 34.7
coord: 93..123
e-value: 240.0
score: 8.7
coord: 196..225
e-value: 0.011
score: 24.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 77..156
e-value: 1.6E-5
score: 23.9
coord: 153..308
e-value: 8.4E-36
score: 123.4
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3DG3DSA:1.25.70.10coord: 198..316
e-value: 2.5E-19
score: 71.5
coord: 71..197
e-value: 6.2E-18
score: 66.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..72
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 23..313
NoneNo IPR availablePANTHERPTHR13068:SF46SUBFAMILY NOT NAMEDcoord: 23..313