CSPI06G25800 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G25800
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionMitochondrial transcription termination factor family protein
LocationChr6 : 22885071 .. 22886896 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGAAGATAGCACTTATCCTCTTCAATTCTCTTCCTCAACCACTTCCTGGATTTCCCTCTGTTAAACCCCACAAAGCTCTCCATTAACCATGCAATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTCTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCTCGCAACCCCGCCATTCCTCCCCTCTCCCCCCCGCTCCCTCCATCTCCCCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATTGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCTGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCACCCTCGAACTCCGTCGAATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCGCGCTTCCGTTCTTATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAAGATCAGCTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTCCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAAGAATTGAAGGAATTTCCTCACTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAAGCAGCGAAATGAAATTCCGGGAGAAATTGGAGGTATGTTGCGATTCTTCAATACCCTTTAGAACTTCTCCTTTGTGGTGTACAAAATTGTGATAAATTCAATTTTCTTTAATCCAAAAGTATAGAATTCTTCTTCATAGCTCTCTGTTTCTATCTTCATTTCAATTCTGGTCCGATTATGTCTTTGGGTTCTTACACTTAATCTAATTAGAGGTTTAGCATAAGATAATTCCATTTAGTGGAACATCACAATATTTTAGGTAGTTTAAGTTCTTCAGTTTAACCAATATGTGAATAATATCAAAGGGGAAAATAATCATCGTTTTGATTTCGGTAGATTTTAATATTTTAGATTTCCGTTCTTAATTTTTAGTATATTATATTTTTACTCTTCAATTTTAATTGAAGTACATAGATCAAAATAATATATACTTTATTGAAAAGATTGTGGTCGTTTTACGAGTGATTCTTTTGCATTAAAACGTGGGTTTTTGAAATAGTCGTGTTTGTTTTCATTGAGCAGCAATGGGAGTGGGAGTGAGTAGAGTAGTGGTATGAGAATTGCACCATAATTAAATGAGCAAAAAGAAAAGAAAAAAAAAGATACATCAAGCTTTGGCTCAAGAAATATTTAGCATCTTGCATTGGAACAAGCAGAGGCCTGCAATTTTCTTACGATATGTGTTAGCTCACTCACTCCTTTCTCTATTGGAATTTTGTTTATGTAATCCTCTTGAGATTGGAAGTTTAAATCTTCATATTTCTACTTGTTGTACTGAAGGCACAGTAAACAGATAAAAAGGATTTAGACCACGTTGTTCAGTG

mRNA sequence

ATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTCTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCTCGCAACCCCGCCATTCCTCCCCTCTCCCCCCCGCTCCCTCCATCTCCCCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATTGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCTGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCACCCTCGAACTCCGTCGAATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCGCGCTTCCGTTCTTATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAAGATCAGCTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTCCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAAGAATTGAAGGAATTTCCTCACTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAAGCAGCGAAATGAAATTCCGGGAGAAATTGGAGCAATGGGAGTGGGAGTGA

Coding sequence (CDS)

ATGGCGGATTCGTCTCTTCACCTCCTCTCCAATGGCGGATTCATCCACCATTCTTCTCCTTCCCCTCTCTTCCCCTCTCTTCCTCGCTCCAGAACCCTCCATTTCCCCGTACTTTCCAATTCCAGAACCTCCTTCATCTTCCCTTCCAAACTCCCTCCTCGCAACCCCGCCATTCCTCCCCTCTCCCCCCCGCTCCCTCCATCTCCCCCTCACACCGACCATCACTCCGACTTTCAGGAGAAAATGCTCTTCCTCGACTCCATTGGCATCGACTTCCTCTCCGTCATCAAAGACCACCCTCCCGTCGCCTCTGCTTCCCTCCCCGACATCAGATCAGCCGTCGATTTCATGACCTCCATGAATTTCACCACCCTCGAACTCCGTCGAATCGTCGGTATGTGCCCTGAGATTCTCACCTCTCGCGCTTCCGTTCTTATCCCTATCTTCACCTTCCTCCTCCGCGAAGCTCGAGTCGACGGTTCCGACATCAAACGCGTTATCAATCGACGCCCTAGATTGTTAGCCTGTAGCGTGAAAGATCAGCTCCGTCCAACTCTCTACTTCCTGCAAAGCATCGGCATATCCGAGGTACATAAACACACATCCTTACTCTCATGTAGCGTTGAAGAGAAACTGATTCCGAGAATCGAGTTCTTCGAGAACTTAGGGTTTTCCCGACGGGATGCTTTGATAATGTTCCGGCGATTCCCGCAGCTGTTTTGCTACAGCATAAAGGAGAATCTGGAACCGAAACTGAATTACTTTGTGGTGGAAATGGGGAGAGAATTGAAAGAATTGAAGGAATTTCCTCACTATTTCTCGTTTAGTTTAGAGAACAGGATCAAGCCAAGACATCAAAGCTGTGTGGAGAAGGGAGTTTGTTTTCCATTGCCGGAGTTGTTGAAAAGCAGCGAAATGAAATTCCGGGAGAAATTGGAGCAATGGGAGTGGGAGTGA
Homology
[Close]
BLAST of CSPI06G25800 vs. Swiss-Prot
Match: MTEF1_ARATH (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-41
Identity = 96/241 (39.83%), Postives = 144/241 (59.75%), Query Frame = 1 

Query: 78  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEI 137
           F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +   + RI+ M P++
Sbjct: 33  FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL 92

Query: 138 LTSRA-SVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGI-- 197
           LTS   S ++P+  FL  E  +   DI + I+R PRLL  SV  QLRP L FL+++G   
Sbjct: 93  LTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 152

Query: 198 --SEVHKHTSLLSCSVEEKLIPRIEFFEN-LGFSRRDALIMFRRFPQLFCYSIKENLEPK 257
             +   ++T LL  +VE  LIP+IE+ E  LGF+R +   M  R P L  YS+  NL PK
Sbjct: 153 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 212

Query: 258 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK 313
           + +F+ EM  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   
Sbjct: 213 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHW 272

[Close]
BLAST of CSPI06G25800 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.0e-23
Identity = 71/238 (29.83%), Postives = 123/238 (51.68%), Query Frame = 1 

Query: 84  FLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMCPEILT 143
           FL  +GI   D  +++   P +   SL D ++  + F+ ++     +  +I+   P ILT
Sbjct: 238 FLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILT 297

Query: 144 SRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISE--- 203
                L     FL +    +   I R++ R P +++ SV+D+LRPT+ + +S+ +     
Sbjct: 298 YSRQKLTSTVEFLSQTGLTE-EQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVL 357

Query: 204 VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFV 263
           +H+       S+E  L P  EFF   GF   +  IM  R+  L+ +S+KEN+ PK +YF 
Sbjct: 358 LHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQ 417

Query: 264 VEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEQ 315
             M     EL +FP +F +SL+ RIKPR++     GV   L ++L  S ++F + +++
Sbjct: 418 T-MDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKK 473

[Close]
BLAST of CSPI06G25800 vs. Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.9e-20
Identity = 66/244 (27.05%), Postives = 123/244 (50.41%), Query Frame = 1 

Query: 79  QEKMLFLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMC 138
           QE++ +L S+G+   D   ++   P +   ++ + +++ + F+  +     ++ +IV   
Sbjct: 220 QERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAAT 279

Query: 139 PEILT-SRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFL-QSI 198
           P + + S  + L P   +L+ E  +  +D+ +V+   P++L   +         FL + +
Sbjct: 280 PSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKEL 339

Query: 199 G------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKE 258
           G      +  V KH  LL  S+++  +PRI F  ++G    D L +     Q+   S+++
Sbjct: 340 GAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLED 399

Query: 259 NLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPELL 306
           NL+PK  Y V E+  E+  L ++P Y S SL+ RI+PRH+  VE     KG  FPL  L+
Sbjct: 400 NLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGP-FPLSSLV 459

[Close]
BLAST of CSPI06G25800 vs. Swiss-Prot
Match: MTEF6_ARATH (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.3e-16
Identity = 58/227 (25.55%), Postives = 108/227 (47.58%), Query Frame = 1 

Query: 94  SVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLIPIFTFL 153
           S I   PP+ S S+ + +   + F  ++     +L +++   P +++      + +    
Sbjct: 97  SAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSF 156

Query: 154 LREARVDGSD-IKRVINRRPRLLACSVKDQLRPTLYFLQS-IGISE------VHKHTSLL 213
           L    +D    I +V+ + P L+  SV  +LRPT  FL+S +G+SE      V     LL
Sbjct: 157 LASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLL 216

Query: 214 SCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELK 273
              V + L P  ++ +  GF       M   +PQ+   S+K +L+P++ + V  MGR + 
Sbjct: 217 CRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMD 276

Query: 274 ELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK 312
           E+  +P +F   L+ +++ R +   +  +   L E+L  +  KF EK
Sbjct: 277 EVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEK 323

[Close]
BLAST of CSPI06G25800 vs. Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.3e-15
Identity = 69/212 (32.55%), Postives = 96/212 (45.28%), Query Frame = 1 

Query: 110 IRSAVDFMTSMNFTTLELRRIVGMCPEILTSRASVLI-PIFTFLLREARVDGSDIKRVIN 169
           I   V F+  M      +  ++   P +LT+     I P+  FLL  A V   DI +VI 
Sbjct: 424 IAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIA 483

Query: 170 RRPRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRD 229
             P LL CS+  +L P + +  S+GI                        F  LG     
Sbjct: 484 MDPALLGCSIGTKLEPNMRYYISLGIR-----------------------FYQLGE---- 543

Query: 230 ALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSC 289
              M   FP L  Y++ +NL PK  Y    M R L++L EFP +FS+SLE RI PRH   
Sbjct: 544 ---MIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIM 603

Query: 290 VEKGVCFPLPELLKSSEMKF----REKLEQWE 317
           VE  V F L  +L  ++ +F    R+K+E+ E
Sbjct: 604 VENRVNFKLRYMLACTDEEFERRVRDKVERRE 604

[Close]
BLAST of CSPI06G25800 vs. TrEMBL
Match: A0A0A0KKL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454440 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 4.0e-140
Identity = 264/313 (84.35%), Postives = 268/313 (85.62%), Query Frame = 1 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTL                               F +++G S            +LF
Sbjct: 181 QLRPTL------------------------------YFLQSIGIS------------ELF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 271

Query: 301 LKSSEMKFREKLE 314
           LKSSEMKFREKLE
Sbjct: 301 LKSSEMKFREKLE 271

[Close]
BLAST of CSPI06G25800 vs. TrEMBL
Match: F6HKR0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g02500 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.0e-111
Identity = 204/290 (70.34%), Postives = 242/290 (83.45%), Query Frame = 1 

Query: 24  FPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDHHSDFQEKML 83
           F +L R R +HFP+LS S+TS   P K P ++P +P +SPP  P PP  D HS F+EKML
Sbjct: 26  FSTLSRPRIIHFPILS-SKTSITIPPK-PSKSPELPSISPPSSPDPP--DPHSQFEEKML 85

Query: 84  FLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILTSRAS 143
           +LDSIG+D  S+I DHPP+  ASL DI+S VDF+ SM FT LE  RI GMCPEIL SR S
Sbjct: 86  YLDSIGLDLFSLINDHPPIVCASLDDIKSTVDFLYSMGFTALEFCRICGMCPEILNSRVS 145

Query: 144 VLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHKHTSL 203
            ++P+FTFLLREARVDGSD++RV+NRRPRLLAC+VK++LRPTLYFLQSIGISEV+KHT+L
Sbjct: 146 DIVPVFTFLLREARVDGSDLRRVVNRRPRLLACNVKNRLRPTLYFLQSIGISEVNKHTNL 205

Query: 204 LSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEMGREL 263
           LSCSVEEKLIPRI++ E +GFS+RDA+ M RRFPQLF +SIK+NLEPK NYFVVEMGREL
Sbjct: 206 LSCSVEEKLIPRIDYLEKIGFSKRDAVSMVRRFPQLFNHSIKDNLEPKFNYFVVEMGREL 265

Query: 264 KELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLE 314
           +ELKEFP YFSFSLENRIKPRHQ CVEKGVCFPLP +LK++E KF  +LE
Sbjct: 266 RELKEFPQYFSFSLENRIKPRHQCCVEKGVCFPLPIMLKTTEAKFHGRLE 311

[Close]
BLAST of CSPI06G25800 vs. TrEMBL
Match: A0A061EUD0_THECC (Mitochondrial transcription termination factor family protein OS=Theobroma cacao GN=TCM_022856 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.6e-109
Identity = 204/299 (68.23%), Postives = 241/299 (80.60%), Query Frame = 1 

Query: 15  IHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPPLSPPLPPSPPHTDH 74
           +HH      FPSL R R LHFP  S+   +   P K PP+ P IP +SPP P S      
Sbjct: 21  LHHHKHHD-FPSLSRPRNLHFPTFSSKTITIPLPPK-PPKIPEIPSISPP-PSS------ 80

Query: 75  HSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMC 134
           HSDFQEKML+LDSIG+DF S+I+ HPP+ + SL D++S VDF+TS NF+TLELRRI+ MC
Sbjct: 81  HSDFQEKMLYLDSIGLDFFSLIQHHPPIITTSLNDLKSTVDFLTSFNFSTLELRRILSMC 140

Query: 135 PEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGI 194
           PEILT+  + L+PIFTFL REARV+GSD+K+VINRRPRLL C+V+ QLRPTLYFLQ+IGI
Sbjct: 141 PEILTTNPTSLLPIFTFLFREARVNGSDLKKVINRRPRLLTCNVETQLRPTLYFLQNIGI 200

Query: 195 SEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNY 254
           SEV KHTSLLSCSVE KLIPRIE+F+ +GFS R  + MFRRFPQLF YS+KEN EPKLNY
Sbjct: 201 SEVKKHTSLLSCSVENKLIPRIEYFQKMGFSYRQTISMFRRFPQLFNYSVKENYEPKLNY 260

Query: 255 FVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLE 314
           FVVEMGR+LKELKEFP Y SFSLENRIKPRHQ C+EKGVCFPLP LL++SE++FR +LE
Sbjct: 261 FVVEMGRDLKELKEFPQYLSFSLENRIKPRHQCCIEKGVCFPLPVLLRTSEVEFRNRLE 310

[Close]
BLAST of CSPI06G25800 vs. TrEMBL
Match: A0A0D2U1T2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G151800 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 4.1e-105
Identity = 199/294 (67.69%), Postives = 240/294 (81.63%), Query Frame = 1 

Query: 24  FPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRN----PAIPPLSPPLPPSPPHTDHHSDFQ 83
           FP L R + LHFP  S SRT  I P+ LPP+     P IP  SPP P  PP++  HSDFQ
Sbjct: 34  FPLLSRPKNLHFPTFS-SRT--ITPTSLPPKPNPKFPQIPSTSPPPPMPPPNS--HSDFQ 93

Query: 84  EKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEILT 143
           EKML+L+SIG+DF S+I+ HPP+  ASL D++S VDF+ S++FTTLELRRI+ MCP ILT
Sbjct: 94  EKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILT 153

Query: 144 SRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVHK 203
            + + L+PIFTFLLREA V+GSD+K+VINRRPRLLAC+V+ QLRPTLYFLQSIGISEV K
Sbjct: 154 VKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKK 213

Query: 204 HTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVEM 263
           HTSLL+CSVE KLIPRI++F+ +GFS R  + MF RFP LF YSIKEN E KLNYF+VEM
Sbjct: 214 HTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEM 273

Query: 264 GRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLE 314
           GR+L+E++EFP YFSFSLE+RIKPRHQ CVEKGVCFPLP LLK+SE++FR +LE
Sbjct: 274 GRDLREIREFPQYFSFSLESRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE 322

[Close]
BLAST of CSPI06G25800 vs. TrEMBL
Match: W9RVG0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023522 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.7e-104
Identity = 200/295 (67.80%), Postives = 235/295 (79.66%), Query Frame = 1 

Query: 25  PSLPRSRTL--HFPVLSNSRTSFIFPSKLPPRNPAIPPLSP----PLPPSPPHTDHHSDF 84
           PS P S T   HFP   N      FPS   P++   P LS     P+ P+  +T   SDF
Sbjct: 14  PSSPSSSTTKPHFPTHPNHD----FPSLSHPKSLRFPTLSTKTNTPINPTNTNTTSTSDF 73

Query: 85  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEIL 144
           QEK+L+LDSIGIDFL++I DHPPV S  L +I+S VDF+ S   T +E RRIVGMCPEIL
Sbjct: 74  QEKLLYLDSIGIDFLTLIDDHPPVLSFPLAEIKSTVDFVASFGITAVEFRRIVGMCPEIL 133

Query: 145 TSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEVH 204
            SR S ++PIFTFL+REARV+GSD++RVINRRPRLLACSVK++LRPTLYFLQSIGI+EV+
Sbjct: 134 ASRVSEIVPIFTFLIREARVNGSDLRRVINRRPRLLACSVKNRLRPTLYFLQSIGIAEVN 193

Query: 205 KHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFVVE 264
           KHT+LLS SVEEKLIPRIE+FE +GFSRRD++ MFRRFPQLFCYS+KEN EPK +YFVVE
Sbjct: 194 KHTNLLSSSVEEKLIPRIEYFEKIGFSRRDSVSMFRRFPQLFCYSVKENFEPKFDYFVVE 253

Query: 265 MGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLE 314
           MGR+LKELKEFP YFSFSLE RIKPRHQ CVEKGVCFPLP LLK+S  KF ++L+
Sbjct: 254 MGRDLKELKEFPQYFSFSLEKRIKPRHQCCVEKGVCFPLPILLKTSNAKFWDRLD 304

[Close]
BLAST of CSPI06G25800 vs. TAIR10
Match: AT2G36000.1 (AT2G36000.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 312.0 bits (798), Expect = 4.3e-85
Identity = 175/323 (54.18%), Postives = 220/323 (68.11%), Query Frame = 1 

Query: 1   MADSSLHLLSNG-GFIHHSSPSPLFPSLPRSRTLHFPVLS-----NSRTSFIFPSKLPPR 60
           M   +L  LS+    +HH+     FPSL R R  +FP LS     +S +S  F S     
Sbjct: 1   MQQEALSFLSSSLPSLHHN-----FPSLSRLRFNNFPALSFKPNTSSSSSSFFKS----- 60

Query: 61  NPAIPPLSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAV 120
            P IP LS     +       S   EK+++LDS+GIDFL++I  HPP+ S +L  + S V
Sbjct: 61  -PDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVV 120

Query: 121 DFMTS--MNFTTLELRRIVGMCPEILTSR-ASVLIPIFTFLLREARVDGS-DIKRVINRR 180
           D+MT+  +NFT  + RR+V MCPE+LTS   S  IP+ TFLLRE  VD   D+++ + RR
Sbjct: 121 DYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRR 180

Query: 181 PRLLACSVKDQLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAL 240
           PRLLACSV  QLRPTLYFLQ IGI + HKHT LLSCSV+ KL+PRI++FE LGFSRR A 
Sbjct: 181 PRLLACSVDHQLRPTLYFLQRIGILDPHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSAT 240

Query: 241 IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVE 300
            MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C  
Sbjct: 241 AMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAA 300

Query: 301 KGVCFPLPELLKSSEMKFREKLE 314
           KGV FPLP +LK++E  FR+ LE
Sbjct: 301 KGVRFPLPVMLKTNEAGFRDTLE 312

[Close]
BLAST of CSPI06G25800 vs. TAIR10
Match: AT2G34620.1 (AT2G34620.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 194.9 bits (494), Expect = 7.6e-50
Identity = 105/239 (43.93%), Postives = 156/239 (65.27%), Query Frame = 1 

Query: 79  QEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEIL 138
           +EK+L L+ +GID    +  +P + SA L  I+S + F+ S      +L RI+GMCP+IL
Sbjct: 56  KEKILCLELMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKIL 115

Query: 139 TSRASV-LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISEV 198
           TS     L P+F FL  +  V  +  +RVI + PRLL  SV+DQL+P L++LQ +G+ ++
Sbjct: 116 TSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGLKDL 175

Query: 199 ----HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLN 258
               ++   LL  SVE  LIP++ F E++GFSR +A+ M  R P LF +SI+ N +PKL+
Sbjct: 176 EALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFKPKLD 235

Query: 259 YFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKL 313
           YF+ E+  +L+ LKEFP YF+FSLE RIKPRH   +E+G+  PL  +LKS++ +F + L
Sbjct: 236 YFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFEQLL 294

[Close]
BLAST of CSPI06G25800 vs. TAIR10
Match: AT2G03050.1 (AT2G03050.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 171.4 bits (433), Expect = 9.0e-43
Identity = 96/241 (39.83%), Postives = 144/241 (59.75%), Query Frame = 1 

Query: 78  FQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSMNFTTLELRRIVGMCPEI 137
           F+EK+++L  + +D    ++ +P + SA +  + S    ++S   +   + RI+ M P++
Sbjct: 32  FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL 91

Query: 138 LTSRA-SVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGI-- 197
           LTS   S ++P+  FL  E  +   DI + I+R PRLL  SV  QLRP L FL+++G   
Sbjct: 92  LTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 151

Query: 198 --SEVHKHTSLLSCSVEEKLIPRIEFFEN-LGFSRRDALIMFRRFPQLFCYSIKENLEPK 257
             +   ++T LL  +VE  LIP+IE+ E  LGF+R +   M  R P L  YS+  NL PK
Sbjct: 152 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 211

Query: 258 LNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREK 313
           + +F+ EM  ++KELK FP YFSFSLE +IKPRH+   E G+  PL E+LK S+ +F   
Sbjct: 212 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHW 271

[Close]
BLAST of CSPI06G25800 vs. TAIR10
Match: AT3G18870.1 (AT3G18870.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 132.5 bits (332), Expect = 4.6e-31
Identity = 87/260 (33.46%), Postives = 140/260 (53.85%), Query Frame = 1 

Query: 62  SPPLPPS--PPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASAS--LPDIRSAVDFM 121
           SPP P S  P +    +  +E +  L S+GI     +  +P +A  +  L  I SAV+ +
Sbjct: 18  SPPSPSSSKPLYLKFQTSHRENLRHLSSLGI-----VPQNPRLAPPANDLSVILSAVNLL 77

Query: 122 TSMNFTTLELRRIVGMCPEIL--TSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLA 181
            S   +  +  R+V +CP++   T   S L P+F FL  E      + + +I   P +L 
Sbjct: 78  KSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNILF 137

Query: 182 CSVKDQLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFSRRDALI 241
             V+  LRPTL +L+ +G+  +++    +  +L+  VE KL  ++ F +++GF   +A  
Sbjct: 138 SDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVE-KLRAKMRFLKSIGFEHEEAAR 197

Query: 242 MFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEK 301
           +  R P +F YS+++NL PK  + V +M REL+ELK+FP YF+FSL  RI+PRH    +K
Sbjct: 198 VCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKK 257

Query: 302 GVCFPLPELLKSSEMKFREK 312
            V   L  +L   + KF  K
Sbjct: 258 NVRVSLSRMLMWGDQKFYSK 271

[Close]
BLAST of CSPI06G25800 vs. TAIR10
Match: AT4G14605.1 (AT4G14605.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24
Identity = 71/238 (29.83%), Postives = 123/238 (51.68%), Query Frame = 1 

Query: 84  FLDSIGI---DFLSVIKDHPPVASASLPD-IRSAVDFMTSMNFTTLELRRIVGMCPEILT 143
           FL  +GI   D  +++   P +   SL D ++  + F+ ++     +  +I+   P ILT
Sbjct: 238 FLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILT 297

Query: 144 SRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKDQLRPTLYFLQSIGISE--- 203
                L     FL +    +   I R++ R P +++ SV+D+LRPT+ + +S+ +     
Sbjct: 298 YSRQKLTSTVEFLSQTGLTE-EQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVL 357

Query: 204 VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLFCYSIKENLEPKLNYFV 263
           +H+       S+E  L P  EFF   GF   +  IM  R+  L+ +S+KEN+ PK +YF 
Sbjct: 358 LHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQ 417

Query: 264 VEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPELLKSSEMKFREKLEQ 315
             M     EL +FP +F +SL+ RIKPR++     GV   L ++L  S ++F + +++
Sbjct: 418 T-MDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKK 473

[Close]
BLAST of CSPI06G25800 vs. NCBI nr
Match: gi|778717625|ref|XP_011657726.1| (PREDICTED: transcription factor E2FA-like isoform X2 [Cucumis sativus])

HSP 1 Score: 625.2 bits (1611), Expect = 6.4e-176
Identity = 313/314 (99.68%), Postives = 314/314 (100.00%), Query Frame = 1 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKSSEMKFREKLEQ 315
           LKSSEMKFREKLE+
Sbjct: 301 LKSSEMKFREKLEK 314

[Close]
BLAST of CSPI06G25800 vs. NCBI nr
Match: gi|778717617|ref|XP_011657725.1| (PREDICTED: transcription factor E2FA-like isoform X1 [Cucumis sativus])

HSP 1 Score: 625.2 bits (1611), Expect = 6.4e-176
Identity = 313/314 (99.68%), Postives = 314/314 (100.00%), Query Frame = 1 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKSSEMKFREKLEQ 315
           LKSSEMKFREKLE+
Sbjct: 301 LKSSEMKFREKLEK 314

[Close]
BLAST of CSPI06G25800 vs. NCBI nr
Match: gi|778717628|ref|XP_011657727.1| (PREDICTED: transcription factor E2FA-like isoform X3 [Cucumis sativus])

HSP 1 Score: 625.2 bits (1611), Expect = 6.4e-176
Identity = 313/314 (99.68%), Postives = 314/314 (100.00%), Query Frame = 1 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP
Sbjct: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF
Sbjct: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300

Query: 301 LKSSEMKFREKLEQ 315
           LKSSEMKFREKLE+
Sbjct: 301 LKSSEMKFREKLEK 314

[Close]
BLAST of CSPI06G25800 vs. NCBI nr
Match: gi|659125296|ref|XP_008462613.1| (PREDICTED: uncharacterized protein LOC103500930 isoform X3 [Cucumis melo])

HSP 1 Score: 603.2 bits (1554), Expect = 2.6e-169
Identity = 303/314 (96.50%), Postives = 305/314 (97.13%), Query Frame = 1 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPP
Sbjct: 57  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 116

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 117 LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 176

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 177 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 236

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLF
Sbjct: 237 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 296

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 297 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 356

Query: 301 LKSSEMKFREKLEQ 315
           LKSSEMKFREKLE+
Sbjct: 357 LKSSEMKFREKLEK 370

[Close]
BLAST of CSPI06G25800 vs. NCBI nr
Match: gi|659125294|ref|XP_008462612.1| (PREDICTED: uncharacterized protein LOC103500930 isoform X2 [Cucumis melo])

HSP 1 Score: 603.2 bits (1554), Expect = 2.6e-169
Identity = 303/314 (96.50%), Postives = 305/314 (97.13%), Query Frame = 1 

Query: 1   MADSSLHLLSNGGFIHHSSPSPLFPSLPRSRTLHFPVLSNSRTSFIFPSKLPPRNPAIPP 60
           MADSSLHLLSNGGFI HSSPSPLFPSLPR RTLHFPVLSNSRTSFIFPSKLPPR P IPP
Sbjct: 57  MADSSLHLLSNGGFIRHSSPSPLFPSLPRFRTLHFPVLSNSRTSFIFPSKLPPRVPTIPP 116

Query: 61  LSPPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 120
           LS PLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM
Sbjct: 117 LSSPLPPSPPHTDHHSDFQEKMLFLDSIGIDFLSVIKDHPPVASASLPDIRSAVDFMTSM 176

Query: 121 NFTTLELRRIVGMCPEILTSRASVLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 180
           NFT LE RRIVGMCPE+LTSRAS LIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD
Sbjct: 177 NFTALEFRRIVGMCPEVLTSRASDLIPIFTFLLREARVDGSDIKRVINRRPRLLACSVKD 236

Query: 181 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDALIMFRRFPQLF 240
           QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGF RRDALIMFRRFPQLF
Sbjct: 237 QLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFCRRDALIMFRRFPQLF 296

Query: 241 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 300
           CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL
Sbjct: 297 CYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPEL 356

Query: 301 LKSSEMKFREKLEQ 315
           LKSSEMKFREKLE+
Sbjct: 357 LKSSEMKFREKLEK 370

The following BLAST results are available for this feature:
BLAST of CSPI06G25800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF1_ARATH1.6e-4139.83Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN... [more]
MTEF5_ARATH2.0e-2329.83Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF9_ARATH5.9e-2027.05Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF6_ARATH2.3e-1625.55Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
MTEF2_ARATH3.3e-1532.55Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of CSPI06G25800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKL6_CUCSA4.0e-14084.35Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454440 PE=4 SV=1[more]
F6HKR0_VITVI3.0e-11170.34Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g02500 PE=4 SV=... [more]
A0A061EUD0_THECC1.6e-10968.23Mitochondrial transcription termination factor family protein OS=Theobroma cacao... [more]
A0A0D2U1T2_GOSRA4.1e-10567.69Uncharacterized protein OS=Gossypium raimondii GN=B456_013G151800 PE=4 SV=1[more]
W9RVG0_9ROSA2.7e-10467.80Uncharacterized protein OS=Morus notabilis GN=L484_023522 PE=4 SV=1[more]
BLAST of CSPI06G25800 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G36000.14.3e-8554.18 Mitochondrial transcription termination factor family protein[more]
AT2G34620.17.6e-5043.93 Mitochondrial transcription termination factor family protein[more]
AT2G03050.19.0e-4339.83 Mitochondrial transcription termination factor family protein[more]
AT3G18870.14.6e-3133.46 Mitochondrial transcription termination factor family protein[more]
AT4G14605.11.1e-2429.83 Mitochondrial transcription termination factor family protein[more]
BLAST of CSPI06G25800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778717625|ref|XP_011657726.1|6.4e-17699.68PREDICTED: transcription factor E2FA-like isoform X2 [Cucumis sativus][more]
gi|778717617|ref|XP_011657725.1|6.4e-17699.68PREDICTED: transcription factor E2FA-like isoform X1 [Cucumis sativus][more]
gi|778717628|ref|XP_011657727.1|6.4e-17699.68PREDICTED: transcription factor E2FA-like isoform X3 [Cucumis sativus][more]
gi|659125296|ref|XP_008462613.1|2.6e-16996.50PREDICTED: uncharacterized protein LOC103500930 isoform X3 [Cucumis melo][more]
gi|659125294|ref|XP_008462612.1|2.6e-16996.50PREDICTED: uncharacterized protein LOC103500930 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G25800.1CSPI06G25800.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 154..308
score: 2.7E-35coord: 78..156
score: 1.
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 93..123
score: 240.0coord: 230..262
score: 2.0E-5coord: 164..195
score: 3.1E-5coord: 196..225
score: 0.011coord: 263..294
score: 0.0022coord: 128..159
score:
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 31..313
score: 2.6E
NoneNo IPR availablePANTHERPTHR13068:SF22SUBFAMILY NOT NAMEDcoord: 31..313
score: 2.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI06G25800Cla008394Watermelon (97103) v1cpiwmB521
CSPI06G25800Csa6G454440Cucumber (Chinese Long) v2cpicuB313
CSPI06G25800MELO3C024579Melon (DHL92) v3.5.1cpimeB513
CSPI06G25800ClCG01G014920Watermelon (Charleston Gray)cpiwcgB453
CSPI06G25800MELO3C024579.2Melon (DHL92) v3.6.1cpimedB497
CSPI06G25800CsaV3_6G041010Cucumber (Chinese Long) v3cpicucB363
CSPI06G25800Cla97C01G013950Watermelon (97103) v2cpiwmbB433
CSPI06G25800Bhi03G001386Wax gourdcpiwgoB637
CSPI06G25800Cucsa.083730Cucumber (Gy14) v1cgycpiB085
CSPI06G25800Cp4.1LG19g04730Cucurbita pepo (Zucchini)cpecpiB503
CSPI06G25800CsGy6G025370Cucumber (Gy14) v2cgybcpiB287
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI06G25800Cucurbita pepo (Zucchini)cpecpiB081
CSPI06G25800Cucurbita pepo (Zucchini)cpecpiB627
CSPI06G25800Cucurbita pepo (Zucchini)cpecpiB878
CSPI06G25800Bottle gourd (USVL1VR-Ls)cpilsiB423
CSPI06G25800Bottle gourd (USVL1VR-Ls)cpilsiB440
CSPI06G25800Bottle gourd (USVL1VR-Ls)cpilsiB452
CSPI06G25800Melon (DHL92) v3.6.1cpimedB473
CSPI06G25800Cucumber (Gy14) v2cgybcpiB140
CSPI06G25800Silver-seed gourdcarcpiB0271
CSPI06G25800Silver-seed gourdcarcpiB0282
CSPI06G25800Silver-seed gourdcarcpiB0847
CSPI06G25800Silver-seed gourdcarcpiB0965
CSPI06G25800Cucumber (Chinese Long) v3cpicucB334
CSPI06G25800Watermelon (97103) v2cpiwmbB438
CSPI06G25800Watermelon (97103) v2cpiwmbB442
CSPI06G25800Watermelon (97103) v2cpiwmbB458
CSPI06G25800Wild cucumber (PI 183967)cpicpiB125
CSPI06G25800Cucumber (Gy14) v1cgycpiB362
CSPI06G25800Cucurbita maxima (Rimu)cmacpiB271
CSPI06G25800Cucurbita maxima (Rimu)cmacpiB648
CSPI06G25800Cucurbita maxima (Rimu)cmacpiB689
CSPI06G25800Cucurbita maxima (Rimu)cmacpiB855
CSPI06G25800Cucurbita maxima (Rimu)cmacpiB894
CSPI06G25800Cucurbita moschata (Rifu)cmocpiB261
CSPI06G25800Cucurbita moschata (Rifu)cmocpiB639
CSPI06G25800Cucurbita moschata (Rifu)cmocpiB681
CSPI06G25800Cucurbita moschata (Rifu)cmocpiB838
CSPI06G25800Cucurbita moschata (Rifu)cmocpiB874
CSPI06G25800Cucumber (Chinese Long) v2cpicuB284
CSPI06G25800Melon (DHL92) v3.5.1cpimeB485
CSPI06G25800Watermelon (Charleston Gray)cpiwcgB444
CSPI06G25800Watermelon (Charleston Gray)cpiwcgB463
CSPI06G25800Watermelon (97103) v1cpiwmB467
CSPI06G25800Watermelon (97103) v1cpiwmB534