Cla97C01G008570 (gene) Watermelon (97103) v2

Overview
NameCla97C01G008570
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPentatricopeptide repeat
LocationCla97Chr01 : 8961247 .. 8962590 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCATAGGATTGGTGAAGCCACACGGTTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAGATGTGATTACTTATGGGACTTTAATCAAAGGTCTTTGTCAAACAGGTAATACTAACATTGCACTTAAGTTGCATGAAGAAATGCTCAATGGGACTGGTCGTTATGGCATTAATTGTAAGCCTAATGTTATTTGTTATGGTACCATTATTGATGGGCTCTGTAAAGATGGACAGGAAGATAAGGCAAGGGAACTTTTGGAAGAAATGAAGGCTCGGAGAATGCTTCCAAATGTGGTTTCTTATACCTCTTTGATTCATGGATTTTTCAGTAGTGGAAAGTGGGAGGAGGCTAAATGTCTGCTCAATGAGATGGTGGATCAAGGTGTTCAACCAAATGGAACTACATTTAATGTGTTGATGGATATGCTTTGCAAGGTAGGGCAAGTTATCAACGCTAAGGAGTTGCTAGAGATGATGGTTCAGAGTGGTATTGTTCCTAGTTTATTTCATTATAATACATTGTTGGATGGGTTCTGTTTGGTTGGTGATTTAAATAGTGCTAGGGAACTGTTTGATAGTATGTCAAGTAAGGGATGTGAACCTGATGTGATAAGCTACAATGCGCTAATCAATGGGTATTGCAAAAATGGAAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAATGGGTATTAAGCCATGTGTGATAACATATAATGTGTTGCTAATGGGTCATTTTCAGGCAAGGAAGGTTGATGATGCAAAGAAAATATTTGCTGTCATTCAAGCTCACGGTCTGGTGCCAAGTTCAAATACGTTTAGTATCTTTTTAGATGGGCTATGTAAGAATGATTGTTTGTTAGAAGCAATGGAAATTTTTAATGAGCTATCTTACAATTTGAAATTGAACATCGTTATCTTTAATTGTCTTATCGATGGCTTATGTAAAGCAGGAAAACTTGAAACTGCTTGGGAGCTTTTCAACAAATTGTCCCATGAAGGGCTTCTACCAAATGTTGTGACTTATAACATTATGATCCATGGCTATTGTAAAGAAGGACAACTAGAAAAGGCAAGGGATTTATTTCAAAAGATGGAAGAAAATGGTTGTACCCCTAGTGTAATTACCTACAATACGCTTCTACATGGTTTCTACGAAAGTAATAAACGAGAGGAAGTGGTTGAGCTTCTTCATAGGATGGTTCAGAAAAATGTGTTGCCAGATGCTTCCACCTACAACATAGTCGTAAACATGCTTTCTAAAGATGAAAAGTATCAGGAATTTCTGAACTTGCTTCCAACATTTCCTACTCAAGAGTGTCGGGGTTGA

mRNA sequence

ATGGAGCATAGGATTGGTGAAGCCACACGGTTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAGATGTGATTACTTATGGGACTTTAATCAAAGGTCTTTGTCAAACAGGTAATACTAACATTGCACTTAAGTTGCATGAAGAAATGCTCAATGGGACTGGTCGTTATGGCATTAATTGTAAGCCTAATGTTATTTGTTATGGTACCATTATTGATGGGCTCTGTAAAGATGGACAGGAAGATAAGGCAAGGGAACTTTTGGAAGAAATGAAGGCTCGGAGAATGCTTCCAAATGTGGTTTCTTATACCTCTTTGATTCATGGATTTTTCAGTAGTGGAAAGTGGGAGGAGGCTAAATGTCTGCTCAATGAGATGGTGGATCAAGGTGTTCAACCAAATGGAACTACATTTAATGTGTTGATGGATATGCTTTGCAAGGTAGGGCAAGTTATCAACGCTAAGGAGTTGCTAGAGATGATGGTTCAGAGTGGTATTGTTCCTAGTTTATTTCATTATAATACATTGTTGGATGGGTTCTGTTTGGTTGGTGATTTAAATAGTGCTAGGGAACTGTTTGATAGTATGTCAAGTAAGGGATGTGAACCTGATGTGATAAGCTACAATGCGCTAATCAATGGGTATTGCAAAAATGGAAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAATGGGTATTAAGCCATGTGTGATAACATATAATGTGTTGCTAATGGGTCATTTTCAGGCAAGGAAGGTTGATGATGCAAAGAAAATATTTGCTGTCATTCAAGCTCACGGTCTGGTGCCAAGTTCAAATACGTTTAGTATCTTTTTAGATGGGCTATGTAAGAATGATTGTTTGTTAGAAGCAATGGAAATTTTTAATGAGCTATCTTACAATTTGAAATTGAACATCGTTATCTTTAATTGTCTTATCGATGGCTTATGTAAAGCAGGAAAACTTGAAACTGCTTGGGAGCTTTTCAACAAATTGTCCCATGAAGGGCTTCTACCAAATGTTGTGACTTATAACATTATGATCCATGGCTATTGTAAAGAAGGACAACTAGAAAAGGCAAGGGATTTATTTCAAAAGATGGAAGAAAATGGTTGTACCCCTAGTGTAATTACCTACAATACGCTTCTACATGGTTTCTACGAAAGTAATAAACGAGAGGAAGTGGTTGAGCTTCTTCATAGGATGGTTCAGAAAAATGTGTTGCCAGATGCTTCCACCTACAACATAGTCGTAAACATGCTTTCTAAAGATGAAAAGTATCAGGAATTTCTGAACTTGCTTCCAACATTTCCTACTCAAGAGTGTCGGGGTTGA

Coding sequence (CDS)

ATGGAGCATAGGATTGGTGAAGCCACACGGTTGTTTATGAGAATGCAAAAGTTGGGTTGTAGGCCAGATGTGATTACTTATGGGACTTTAATCAAAGGTCTTTGTCAAACAGGTAATACTAACATTGCACTTAAGTTGCATGAAGAAATGCTCAATGGGACTGGTCGTTATGGCATTAATTGTAAGCCTAATGTTATTTGTTATGGTACCATTATTGATGGGCTCTGTAAAGATGGACAGGAAGATAAGGCAAGGGAACTTTTGGAAGAAATGAAGGCTCGGAGAATGCTTCCAAATGTGGTTTCTTATACCTCTTTGATTCATGGATTTTTCAGTAGTGGAAAGTGGGAGGAGGCTAAATGTCTGCTCAATGAGATGGTGGATCAAGGTGTTCAACCAAATGGAACTACATTTAATGTGTTGATGGATATGCTTTGCAAGGTAGGGCAAGTTATCAACGCTAAGGAGTTGCTAGAGATGATGGTTCAGAGTGGTATTGTTCCTAGTTTATTTCATTATAATACATTGTTGGATGGGTTCTGTTTGGTTGGTGATTTAAATAGTGCTAGGGAACTGTTTGATAGTATGTCAAGTAAGGGATGTGAACCTGATGTGATAAGCTACAATGCGCTAATCAATGGGTATTGCAAAAATGGAAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAATGGGTATTAAGCCATGTGTGATAACATATAATGTGTTGCTAATGGGTCATTTTCAGGCAAGGAAGGTTGATGATGCAAAGAAAATATTTGCTGTCATTCAAGCTCACGGTCTGGTGCCAAGTTCAAATACGTTTAGTATCTTTTTAGATGGGCTATGTAAGAATGATTGTTTGTTAGAAGCAATGGAAATTTTTAATGAGCTATCTTACAATTTGAAATTGAACATCGTTATCTTTAATTGTCTTATCGATGGCTTATGTAAAGCAGGAAAACTTGAAACTGCTTGGGAGCTTTTCAACAAATTGTCCCATGAAGGGCTTCTACCAAATGTTGTGACTTATAACATTATGATCCATGGCTATTGTAAAGAAGGACAACTAGAAAAGGCAAGGGATTTATTTCAAAAGATGGAAGAAAATGGTTGTACCCCTAGTGTAATTACCTACAATACGCTTCTACATGGTTTCTACGAAAGTAATAAACGAGAGGAAGTGGTTGAGCTTCTTCATAGGATGGTTCAGAAAAATGTGTTGCCAGATGCTTCCACCTACAACATAGTCGTAAACATGCTTTCTAAAGATGAAAAGTATCAGGAATTTCTGAACTTGCTTCCAACATTTCCTACTCAAGAGTGTCGGGGTTGA

Protein sequence

MEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYGINCKPNVICYGTIIDGLCKDGQEDKARELLEEMKARRMLPNVVSYTSLIHGFFSSGKWEEAKCLLNEMVDQGVQPNGTTFNVLMDMLCKVGQVINAKELLEMMVQSGIVPSLFHYNTLLDGFCLVGDLNSARELFDSMSSKGCEPDVISYNALINGYCKNGKVEEAMKIYNEMLQMGIKPCVITYNVLLMGHFQARKVDDAKKIFAVIQAHGLVPSSNTFSIFLDGLCKNDCLLEAMEIFNELSYNLKLNIVIFNCLIDGLCKAGKLETAWELFNKLSHEGLLPNVVTYNIMIHGYCKEGQLEKARDLFQKMEENGCTPSVITYNTLLHGFYESNKREEVVELLHRMVQKNVLPDASTYNIVVNMLSKDEKYQEFLNLLPTFPTQECRG
Homology
[Close]
BLAST of Cla97C01G008570 vs. NCBI nr
Match: KDO40555.1 (hypothetical protein CISIN_1g035749mg, partial [Citrus sinensis])

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-08
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0 

Query: 7  EATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
          EA  LF +++  GC P+VITY TLI GLC+TG+T +AL L EEM+NG G +G
Sbjct: 2  EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG 53

[Close]
BLAST of Cla97C01G008570 vs. NCBI nr
Match: XP_006423456.2 (putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Citrus clementina])

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-08
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0 

Query: 7  EATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
          EA  LF +++  GC P+VITY TLI GLC+TG+T +AL L EEM+NG G +G
Sbjct: 2  EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG 53

[Close]
BLAST of Cla97C01G008570 vs. NCBI nr
Match: XP_024957613.1 (pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like isoform X2 [Citrus sinensis])

HSP 1 Score: 70.1 bits (170), Expect = 2.2e-08
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0 

Query: 2   EHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
           E RI EA  LF +++  GC PDV TY TL+ GLC+T +T +AL L EEM NG G +G
Sbjct: 84  ESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFG 140

[Close]
BLAST of Cla97C01G008570 vs. NCBI nr
Match: KDO38966.1 (hypothetical protein CISIN_1g036461mg, partial [Citrus sinensis])

HSP 1 Score: 69.7 bits (169), Expect = 2.8e-08
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 7  EATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
          EA  LFM+++  GC P+V TY TLI GLC+TG+T +AL L EEM NG G +G
Sbjct: 2  EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 53

[Close]
BLAST of Cla97C01G008570 vs. NCBI nr
Match: GAY31874.1 (hypothetical protein CUMW_285160, partial [Citrus unshiu])

HSP 1 Score: 69.7 bits (169), Expect = 2.8e-08
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 7  EATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
          EA  LFM+++  GC P+V TY TLI GLC+TG+T +AL L EEM NG G +G
Sbjct: 2  EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 53

[Close]
BLAST of Cla97C01G008570 vs. TrEMBL
Match: tr|A0A067DG78|A0A067DG78_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g035749mg PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-08
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0 

Query: 7  EATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
          EA  LF +++  GC P+VITY TLI GLC+TG+T +AL L EEM+NG G +G
Sbjct: 2  EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMINGNGEFG 53

[Close]
BLAST of Cla97C01G008570 vs. TrEMBL
Match: tr|A0A2H5MV11|A0A2H5MV11_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_285160 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-08
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 7  EATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
          EA  LFM+++  GC P+V TY TLI GLC+TG+T +AL L EEM NG G +G
Sbjct: 2  EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 53

[Close]
BLAST of Cla97C01G008570 vs. TrEMBL
Match: tr|A0A067DK23|A0A067DK23_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g036461mg PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-08
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 7  EATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
          EA  LFM+++  GC P+V TY TLI GLC+TG+T +AL L EEM NG G +G
Sbjct: 2  EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 53

[Close]
BLAST of Cla97C01G008570 vs. TrEMBL
Match: tr|A0A2H5MVP4|A0A2H5MVP4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_272610 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.5e-08
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 7  EATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
          EA  LF +++  GC+P+V TY TLI GLC+TG+T +AL L EEM NG G +G
Sbjct: 2  EAAALFTKLRVFGCKPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG 53

[Close]
BLAST of Cla97C01G008570 vs. TrEMBL
Match: tr|V4SJV8|V4SJV8_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10026992mg PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 0 

Query: 1  MEHRIGEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEMLNGTGRYG 59
          ME  I +A++L  +M   GCRP+V T  TLI GL +TGN N+ LKLH+EM+NG G +G
Sbjct: 36 MEGNIRDASQLVKKMATFGCRPNVTTCDTLITGLRRTGNMNLTLKLHQEMVNGMGDFG 93

[Close]
BLAST of Cla97C01G008570 vs. TAIR10
Match: AT5G57250.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 19/45 (42.22%), Postives = 27/45 (60.00%), Query Frame = 0 

Query: 6   GEATRLFMRMQKLGCRPDVITYGTLIKGLCQTGNTNIALKLHEEM 51
           GEA  L+  M ++   PD  TY T+IKG C+TG    AL++  E+
Sbjct: 464 GEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508

The following BLAST results are available for this feature:
BLAST of Cla97C01G008570 vs. NCBI nr
Match NameE-valueIdentityDescription
KDO40555.11.7e-0857.69hypothetical protein CISIN_1g035749mg, partial [Citrus sinensis][more]
XP_006423456.21.7e-0857.69putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [C... [more]
XP_024957613.12.2e-0854.39pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like isofor... [more]
KDO38966.12.8e-0857.69hypothetical protein CISIN_1g036461mg, partial [Citrus sinensis][more]
GAY31874.12.8e-0857.69hypothetical protein CUMW_285160, partial [Citrus unshiu][more]
BLAST of Cla97C01G008570 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A067DG78|A0A067DG78_CITSI1.1e-0857.69Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g035749m... [more]
tr|A0A2H5MV11|A0A2H5MV11_CITUN1.9e-0857.69Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_285160 PE=4... [more]
tr|A0A067DK23|A0A067DK23_CITSI1.9e-0857.69Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g036461m... [more]
tr|A0A2H5MVP4|A0A2H5MVP4_CITUN5.5e-0855.77Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_272610 PE=4 SV=1[more]
tr|V4SJV8|V4SJV8_9ROSI1.2e-0753.45Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10026... [more]
BLAST of Cla97C01G008570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C01G008570 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57250.11.4e-0442.22Pentatricopeptide repeat (PPR) superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G008570.1Cla97C01G008570.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 1..58
e-value: 2.6E-12
score: 48.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 303..370
e-value: 1.2E-25
score: 92.2
coord: 234..302
e-value: 1.5E-14
score: 55.9
coord: 371..444
e-value: 2.8E-15
score: 58.3
coord: 162..233
e-value: 4.1E-26
score: 93.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 59..161
e-value: 5.3E-34
score: 120.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 137..169
e-value: 6.1E-7
score: 27.2
coord: 345..378
e-value: 1.4E-14
score: 51.3
coord: 206..238
e-value: 9.8E-13
score: 45.4
coord: 241..274
e-value: 2.6E-5
score: 22.1
coord: 277..301
e-value: 9.4E-4
score: 17.2
coord: 173..205
e-value: 3.5E-10
score: 37.4
coord: 380..414
e-value: 4.6E-6
score: 24.5
coord: 101..134
e-value: 1.4E-9
score: 35.5
coord: 66..100
e-value: 7.8E-9
score: 33.2
coord: 25..51
e-value: 6.6E-5
score: 20.8
coord: 310..344
e-value: 1.3E-9
score: 35.6
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 19..50
e-value: 3.3E-11
score: 42.6
coord: 304..334
e-value: 5.5E-11
score: 41.9
coord: 199..231
e-value: 1.5E-16
score: 59.7
coord: 165..196
e-value: 2.8E-10
score: 39.7
coord: 60..92
e-value: 2.1E-12
score: 46.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 342..389
e-value: 7.6E-22
score: 77.1
coord: 238..287
e-value: 1.9E-12
score: 47.1
coord: 98..147
e-value: 4.9E-17
score: 61.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 274..304
score: 7.541
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 343..377
score: 15.85
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 378..412
score: 11.17
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 99..133
score: 13.11
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 308..342
score: 12.748
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 204..238
score: 15.971
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..22
score: 6.862
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 169..203
score: 12.595
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 413..447
score: 6.774
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 23..53
score: 10.063
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 134..168
score: 11.915
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 64..98
score: 12.068
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 239..273
score: 9.865
NoneNo IPR availablePANTHERPTHR44149FAMILY NOT NAMEDcoord: 82..288
coord: 235..433
coord: 3..158
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 106..264
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 312..409

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C01G008570Cla009097Watermelon (97103) v1wmwmbB237
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G008570Silver-seed gourdcarwmbB0551
Cla97C01G008570Silver-seed gourdcarwmbB0859
Cla97C01G008570Silver-seed gourdcarwmbB0858
Cla97C01G008570Cucumber (Gy14) v2cgybwmbB322
Cla97C01G008570Cucurbita maxima (Rimu)cmawmbB287
Cla97C01G008570Cucurbita maxima (Rimu)cmawmbB289
Cla97C01G008570Cucurbita maxima (Rimu)cmawmbB705
Cla97C01G008570Cucurbita moschata (Rifu)cmowmbB269
Cla97C01G008570Cucurbita moschata (Rifu)cmowmbB271
Cla97C01G008570Cucurbita moschata (Rifu)cmowmbB676
Cla97C01G008570Wild cucumber (PI 183967)cpiwmbB353
Cla97C01G008570Wild cucumber (PI 183967)cpiwmbB361
Cla97C01G008570Wild cucumber (PI 183967)cpiwmbB364
Cla97C01G008570Cucumber (Chinese Long) v3cucwmbB354
Cla97C01G008570Cucumber (Chinese Long) v2cuwmbB339
Cla97C01G008570Bottle gourd (USVL1VR-Ls)lsiwmbB007
Cla97C01G008570Bottle gourd (USVL1VR-Ls)lsiwmbB009
Cla97C01G008570Melon (DHL92) v3.6.1medwmbB005
Cla97C01G008570Melon (DHL92) v3.6.1medwmbB008
Cla97C01G008570Melon (DHL92) v3.5.1mewmbB007
Cla97C01G008570Melon (DHL92) v3.5.1mewmbB009
Cla97C01G008570Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G008570Wax gourdwgowmbB057
Cla97C01G008570Wax gourdwgowmbB067