Cla97C01G006740 (gene) Watermelon (97103) v2

Overview
NameCla97C01G006740
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionF-box protein SKIP14
LocationCla97Chr01 : 6781058 .. 6783207 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTTTGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGGTATTCACATATCTTCGTGTAAATGCTTGCGTTGTTGATTGGTTTATCTTATCAATGACTTTCTTCATTTTTAGTCACAATGTTAATTTGGCTTTTTTTTATTTTAATTTATACTCCATTAAAATTAAAAAAAAAAAAAATCTTGGTGGCAATGTTCAGAATTTAATAAAAGACTCAAAGGAAATGGATTCAATTAAGTTGGTCTAGTAGTGAATAGAAGTCATGGGTTGTAGGGTAAGGCAGATGTCTAGTGAGCAATGTTTTTTAAGTTGGGCACAATAAAGGACTTAAATTTGCTAAAATTTTATTATATACACCAATTTCTTTTTTTTTTTTTTTTAGGCACACTATATATAAAAGTAATCCATAAAGAAGAGAAAGCATAGTTAGAGTGTTAGAGTGGAAGACCCTTAAACACAATAAATTTTGATTTTTTTTAATTTAATAAATAAGGAAAAAAACTCTCATTATTACTATATTTTAAAAATAATGAAAAAGCCCTAAGACCCAAGCCTTAAAGCCTTAGAGCTTCACAAAAGGCGTGCTCTTCAGGCGCGCCTTATTTTGTGAGCCTCACCTTTTTAAGGCAAGGTGTCAGACTTGCACTTGAGCCTAAGTGCCCCTAGGCGCGCGCCTGAGAGGGCTTTTTAAAATACTACTATTGAGTTTAGTCGAAATGCATGTAAACTAACCGAACACTAAAAAAGAGTTATCCAACCATCTTATTTTAAAAATGATCCCGTCAAACGTGTTAAGAAATCGACAATTAAAAGATAAACAAAAAACGTAAATGGTAGAGAATTGACAAATTTACGTGATTCACTAACAACATATTAGCTACTTCCAAGGGCAGAAGATGAGAGCAGTTTATTATTATTGAGAAGATATTAGATTTCAGAGTGAGACGCTAATAGAGCTAGAGAGTTTATATAGTACATTTTCTAAACTTTAGGACCAAAATCATAAATAACATAAGTACAAATACAACTTAGGTGCGGGGGAGTTGCCCCTAAACCCTCGCTAGGGTGCGTTGCTCTGTACCCTGACTTGCTAACCGGCCAACAAGATTCTTGAATTTGGTCGTTCGAAGCACCAAAGAACAAATTCAAATTATCTCAATAAAACAAGAATGTTTGCTTCAAAGAACAACCCTTTTACTTTGAAAACAGAACATGCTCGATTTTTCCTTCTTGGTTCAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTCTCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGCAGGAGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATAAGGAATGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGGTGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCACGCGACACCGTCATAATGTAAGTAGTTCTACTACTGGATTTGTTTGTGAAATTTGTCTTGAAACCTAA

mRNA sequence

ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTTTGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTCTCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGCAGGAGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATAAGGAATGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGGTGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCACGCGACACCGTCATAATGTAAGTAGTTCTACTACTGGATTTGTTTGTGAAATTTGTCTTGAAACCTAA

Coding sequence (CDS)

ATGTCTGAGAATCAGGAACCACCAAATCCGGCGGCTACCGCTGGGAGTTCGTCTTCCGGCGTTCGAATGGAAGCAGGGCCACCGCACGAGGCGTTATTTCTTGTACTGAGTTATCTTCCTCTCTTTGAGCTTCTTTCCATGAGGGCAGTGTGCGTATCGCTGAGAGACGCAGTGGAACATGATGTGTTGCCGTGGCTTCACATCCTCGTCGATCGGCGTTTGAGCTCCCGGCTATCCGATTACACTCTGGGGAGAATCGCCAGGAAGGCCGGTGGTCGCCTTAGAACTTTGGCTTTGATCAATTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGCGGGAGTGGTTAGGGCAGTGGAGACTTTATCTCAACATTCTCACAATTTGAAGAGCCTAATGATTGGTGGCATTTACAACATAGAGAACCAACACCTTGAAGTCCTCAAATGCCACCTTTTCAAGAACCGATCGCAGCAGCAGCAGCAGCAGGAGCGGCAACACCACCACCTCTACCATGAGCACATTGATCGGTCGAAGTTGTTGTGTAATGAATTCCAGCCAGTGATTGATGTACAAATCTGCCCAAAATGCTATGACATAAGGAATGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGAGGAGCAAACACTGGGCGATTGTCGGGGTTGCATTTGTTGCGTTCCAAGGTGTGAAGAATGCGGTGGATGTGTCGATGATGATGAAATAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCTAAATGCAACCATTGTAATAGGTCATATTGCACGCGACACCGTCATAATGTAAGTAGTTCTACTACTGGATTTGTTTGTGAAATTTGTCTTGAAACCTAA

Protein sequence

MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRSQQQQQQERQHHHLYHEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHNVSSSTTGFVCEICLET
Homology
[Close]
BLAST of Cla97C01G006740 vs. NCBI nr
Match: XP_004150124.1 (PREDICTED: F-box protein SKIP28 [Cucumis sativus] >KGN51477.1 hypothetical protein Csa_5G566290 [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 4.3e-144
Identity = 252/316 (79.75%), Postives = 268/316 (84.81%), Query Frame = 0 

Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEH
Sbjct: 30  MSENQEPPNPASVA---------EAGPPHEALFHVMTYLPLFELLSLSAVCVSLRDAVEH 89

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKA GRLRTLALINCFKISDSGLHEVVE NPLL
Sbjct: 90  DVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLL 149

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXX 180
           TKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NR   
Sbjct: 150 TKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN 209

Query: 181 XXXXXXXXXXXXXEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
                        EH+DR +LL ++F PVIDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 210 KQQEWRQVHHLYHEHVDRPRLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENL 269

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCICC+PRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Sbjct: 270 LADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN 329

Query: 301 VSSSTTGFVCEICLET 317
           VSSST GFVCEICLET
Sbjct: 330 VSSSTAGFVCEICLET 336

[Close]
BLAST of Cla97C01G006740 vs. NCBI nr
Match: XP_016903294.1 (PREDICTED: F-box protein SKIP28 isoform X1 [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 4.0e-134
Identity = 238/301 (79.07%), Postives = 252/301 (83.72%), Query Frame = 0 

Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXX 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NR   
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 XXXXXXXXXXXXXEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
                        EH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 292

Query: 301 V 302
           +
Sbjct: 301 I 292

[Close]
BLAST of Cla97C01G006740 vs. NCBI nr
Match: XP_008467113.1 (PREDICTED: F-box protein SKIP28 isoform X2 [Cucumis melo])

HSP 1 Score: 485.7 bits (1249), Expect = 1.2e-133
Identity = 238/300 (79.33%), Postives = 251/300 (83.67%), Query Frame = 0 

Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXX 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NR   
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 XXXXXXXXXXXXXEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
                        EH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 291

[Close]
BLAST of Cla97C01G006740 vs. NCBI nr
Match: XP_023551551.1 (F-box protein SKIP28-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456.4 bits (1173), Expect = 7.6e-125
Identity = 245/317 (77.29%), Postives = 267/317 (84.23%), Query Frame = 0 

Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSEN++ PN  A  GSSS GVR+ AGPPHEALFLVLSYLPLFE+LSM AVCVSLRDAVEH
Sbjct: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFEILSMGAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLH+ VDR LSSRL+DY L RIARKA GRLRTLALINCFKISDS LHEVVE NPLL
Sbjct: 61  DVLPWLHLAVDRPLSSRLNDYILERIARKADGRLRTLALINCFKISDSALHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXX 180
           TKLYVPGCTSLTP GV+RAVETLSQHSHNL SLMIGGIYNIEN+HLEVLK HL K  XXX
Sbjct: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLK-XXXX 180

Query: 181 XXXXXXXXXXXXXEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           XXXXXXXXXXXX ++I+  KLL NE+  +IDV++CPKC +I  VYDCSRERCKIKQE+ +
Sbjct: 181 XXXXXXXXXXXXHKYIEAWKLLRNEYMAMIDVEMCPKCQEIGKVYDCSRERCKIKQEQNS 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
             +CRGC  CVPR        D DE EEAVCAGILC+SCWLQLPKCNHCNR YCTRHR N
Sbjct: 241 GAECRGCSGCVPRXXXXXXXXDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHRQN 300

Query: 301 -VSSSTTGFVCEICLET 317
            VSSS  GFVCE+C+ET
Sbjct: 301 VVSSSAAGFVCEVCIET 316

[Close]
BLAST of Cla97C01G006740 vs. NCBI nr
Match: XP_022939676.1 (F-box protein SKIP28 [Cucurbita moschata])

HSP 1 Score: 454.1 bits (1167), Expect = 3.8e-124
Identity = 246/317 (77.60%), Postives = 267/317 (84.23%), Query Frame = 0 

Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSEN + PN  A  GSSS GVR+ AGPPHEALFLVLSYLPLFELLSM AVCVSLRDAV H
Sbjct: 1   MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLH++VDR LSSRL+DY LGRIARKA GRLRTLALINCFKISDS LHEVVE NPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXX 180
           TKLYVPGCTSLTP GV+RAVETLSQHSHNL SLMIGGIYNIEN+HLEVLK HL K  XXX
Sbjct: 121 TKLYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIENEHLEVLKYHLLK-XXXX 180

Query: 181 XXXXXXXXXXXXXEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
           XXXXXXXXXXXXX  I+ SKLL N++  +IDV++CPKC +I  VYDCSRERCKIKQE+++
Sbjct: 181 XXXXXXXXXXXXXXXIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCSRERCKIKQEQKS 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
             +CRGC  CVPR        D DE EEAVCAGILC+SCWLQLPKCNHCNR YCTRH  N
Sbjct: 241 GAECRGCSGCVPRXXXXXXXXDGDETEEAVCAGILCTSCWLQLPKCNHCNRPYCTRHCQN 300

Query: 301 V-SSSTTGFVCEICLET 317
           V SSS  GFVCE+C+ET
Sbjct: 301 VGSSSAAGFVCEVCIET 316

[Close]
BLAST of Cla97C01G006740 vs. TrEMBL
Match: tr|A0A0A0KSU6|A0A0A0KSU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G566290 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 2.8e-144
Identity = 252/316 (79.75%), Postives = 268/316 (84.81%), Query Frame = 0 

Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPA+ A         EAGPPHEALF V++YLPLFELLS+ AVCVSLRDAVEH
Sbjct: 30  MSENQEPPNPASVA---------EAGPPHEALFHVMTYLPLFELLSLSAVCVSLRDAVEH 89

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKA GRLRTLALINCFKISDSGLHEVVE NPLL
Sbjct: 90  DVLPWLHIVVDGRLSSRLSDYTLGRIARKASGRLRTLALINCFKISDSGLHEVVENNPLL 149

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXX 180
           TKLYVPGCTSLTP GVVRAV+TLSQ SHNLK+LMIGGIYNIENQHLEVL+ HL +NR   
Sbjct: 150 TKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLN 209

Query: 181 XXXXXXXXXXXXXEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
                        EH+DR +LL ++F PVIDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 210 KQQEWRQVHHLYHEHVDRPRLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENL 269

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCICC+PRCEECGGCVDDDEIEEA+C+ ILCSSCW QLPKCNHCNR YC RHR N
Sbjct: 270 LADCRGCICCIPRCEECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN 329

Query: 301 VSSSTTGFVCEICLET 317
           VSSST GFVCEICLET
Sbjct: 330 VSSSTAGFVCEICLET 336

[Close]
BLAST of Cla97C01G006740 vs. TrEMBL
Match: tr|A0A1S4E4Z1|A0A1S4E4Z1_CUCME (F-box protein SKIP28 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.7e-134
Identity = 238/301 (79.07%), Postives = 252/301 (83.72%), Query Frame = 0 

Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXX 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NR   
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 XXXXXXXXXXXXXEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
                        EH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 292

Query: 301 V 302
           +
Sbjct: 301 I 292

[Close]
BLAST of Cla97C01G006740 vs. TrEMBL
Match: tr|A0A1S3CSR5|A0A1S3CSR5_CUCME (F-box protein SKIP28 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 7.8e-134
Identity = 238/300 (79.33%), Postives = 251/300 (83.67%), Query Frame = 0 

Query: 1   MSENQEPPNPAATAGSSSSGVRMEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEH 60
           MSENQEPPNPAA A         EAGPPHEALF V+SYL LFELLSM AVCVSLRDAVEH
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 61  DVLPWLHILVDRRLSSRLSDYTLGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLL 120
           DVLPWLHI+VD RLSSRLSDYTLGRIARKAGGRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 121 TKLYVPGCTSLTPAGVVRAVETLSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXX 180
           TKLYVPGCTSLTPAGVVRAV+T SQHSHNLK+LMIGGIYNIEN HLEVL+ HL +NR   
Sbjct: 121 TKLYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENHHLEVLRSHLLENRSQN 180

Query: 181 XXXXXXXXXXXXXEHIDRSKLLCNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQT 240
                        EH+DR  LL N+F P+IDVQICPKCYDIRNVYDCSRERCKIKQ E  
Sbjct: 181 KQQEWRQVHHLYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRERCKIKQGENL 240

Query: 241 LGDCRGCICCVPRCEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN 300
           L DCRGCI C+PRCEECGGCVD DEIEEA+C GI+CSSCWLQLPKCNHCNR YC RHR N
Sbjct: 241 LADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCNRPYCKRHRDN 291

[Close]
BLAST of Cla97C01G006740 vs. TrEMBL
Match: tr|A0A2P6R431|A0A2P6R431_ROSCH (Putative F-box domain, leucine-rich repeat domain, L domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0443391 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.3e-90
Identity = 164/292 (56.16%), Postives = 208/292 (71.23%), Query Frame = 0 

Query: 24  EAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTL 83
           EAGPP EALFL+L+YLPLFELL+M  VC SLRDAV  DVL WL+I+VD+ LS +LSD  L
Sbjct: 34  EAGPPQEALFLILTYLPLFELLAMNQVCTSLRDAVNKDVLSWLNIIVDKALSLKLSDEIL 93

Query: 84  GRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETL 143
            +I  KA GRLRTLAL+NC KI+D+GL +VVE+NPL++KLY+P CT LTP GV+RAV+TL
Sbjct: 94  MKITSKANGRLRTLALMNCAKITDNGLQQVVEQNPLISKLYLPACTGLTPEGVIRAVKTL 153

Query: 144 SQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXXXXXXXXXXXXXXXEHIDRSKLLC 203
           S H H LKS+MI GIYNI  QHLE L+ +L +                  E++D      
Sbjct: 154 SDHGHCLKSIMINGIYNINKQHLETLESYLHEMNLDAKKEQPGSWPLLLLEYMDSPTFRH 213

Query: 204 NEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDD 263
           ++   +ID+++C KC ++R V+DC R  CK +  E+++  CRGC  C+ RC+ECGGCVD 
Sbjct: 214 DKGHTIIDLEVCSKCDEVRMVFDCPRWACK-RMIERSMTRCRGCKFCILRCQECGGCVDS 273

Query: 264 DEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN--VSSSTTGFVCEIC 314
            EIEEAVCA ILCS CWL LPKCN CN+ YC +H  N   +S +TGFVCE+C
Sbjct: 274 QEIEEAVCAHILCSDCWLHLPKCNFCNKPYCKQHADNKCCTSGSTGFVCEVC 324

[Close]
BLAST of Cla97C01G006740 vs. TrEMBL
Match: tr|A0A2I4F4P9|A0A2I4F4P9_9ROSI (F-box protein SKIP28 OS=Juglans regia OX=51240 GN=LOC108995504 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.1e-87
Identity = 161/297 (54.21%), Postives = 206/297 (69.36%), Query Frame = 0 

Query: 23  MEAGPPHEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYT 82
           ++ GPPHEALFLVL+YLPLFELL+M  VC+SLRDAV  DVLPWL+I+V+R L+ RL+D  
Sbjct: 43  IKPGPPHEALFLVLAYLPLFELLAMGEVCMSLRDAVHKDVLPWLNIIVERPLNLRLTDEI 102

Query: 83  LGRIARKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVET 142
           L  IA KA GRL+TLAL+NC KI+D GL  V+++N  + KLY+P CT LT  GV+RAV+T
Sbjct: 103 LKNIASKAIGRLKTLALMNCVKITDDGLQSVIDRNHGINKLYIPTCTGLTSGGVIRAVKT 162

Query: 143 LSQHSHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXXXXXXXXXXXXXXXEHIDRSKLL 202
           LS+H+H+LKSL I GIYNIE + LE+L+ +L  N                  H     + 
Sbjct: 163 LSEHNHSLKSLRINGIYNIEKEELEILRSYLQMNLSQQMQQPMLF-------HHRNLSMF 222

Query: 203 CNEFQPVIDVQICPKCYDIRNVYDCSRERCKIKQEE--QTLGDCRGCICCVPRCEECGGC 262
            N+ +P+IDV ICPKC D+R VYDC RE CK K ++       C+GC  C+PRCEECGGC
Sbjct: 223 SNKSEPLIDVDICPKCKDVRMVYDCPREACKRKNKKLMHPTAGCKGCNLCIPRCEECGGC 282

Query: 263 VDDDEIEEAVCAGILCSSCWLQLPKCNHCNRSYCTRHRHN--VSSSTTGFVCEICLE 316
           ++ +EIEE  C   LCS CWL+LPKCN CNR YC +H H     SS++ FVC++C E
Sbjct: 283 LESEEIEETACGDSLCSECWLKLPKCNFCNRPYCNQHTHRQCKHSSSSDFVCDVCHE 332

[Close]
BLAST of Cla97C01G006740 vs. Swiss-Prot
Match: sp|Q9ZU90|SKI28_ARATH (F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.7e-43
Identity = 106/297 (35.69%), Postives = 150/297 (50.51%), Query Frame = 0 

Query: 29  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIA 88
           HE L +VL YL  LFELLSM  V  SLRDA+  +   W  ++++  LSSRL+D  L   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 89  RKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHS 148
            K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPGC+ LTP G++  VE+LS+++
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSKNN 136

Query: 149 HNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXXXXXXXXXXXXXXXEHIDRSKLLCNEFQ 208
           H L++L I G+     QHL  L  +L                                 +
Sbjct: 137 HKLETLHINGVNGFTKQHLSALYTYL-------------------------------SSE 196

Query: 209 PVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDE 268
             ID+++CPKC ++R +  CSRE C  KQ +     CRGC  C+PRC EC  C+   D E
Sbjct: 197 GTIDLEVCPKCDEVRMIPSCSRESCNQKQRK-----CRGCWLCIPRCAECAVCLVGSDTE 256

Query: 269 IEE--AVCAGILCSSCWLQLPKCNHCNRSYCTRH---RHNV----SSSTTGFVCEIC 314
            +E                       N+ YCT H   RH +    ++S   F CE C
Sbjct: 257 SQEXXXXXXXXXXXXXXXXXXXXXXXNKPYCTNHSSRRHEIAITDAASRPSFECEAC 277

[Close]
BLAST of Cla97C01G006740 vs. Swiss-Prot
Match: sp|Q9LU91|SKI14_ARATH (F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-31
Identity = 80/259 (30.89%), Postives = 131/259 (50.58%), Query Frame = 0 

Query: 29  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIAR 88
           H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 89  KAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETL-SQHS 148
           +A G ++ L +++C +I+D  L  VV +N  + K+ VPGCT +T  G++  +  L S   
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGK 320

Query: 149 HNLKSLMIGGIYNIENQHL-EVLKCHLFKNRXXXXXXXXXXXXXXXXEHIDRSKLLCNEF 208
             +K L + G++ +   H  E++      N+                 H   + + C++ 
Sbjct: 321 LQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVKQTIQKPRFY------HRGEACVSCDD- 380

Query: 209 QPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEI 268
              +D+++CPKC + + VYDC  E CK K++     +CR C  C+ RC  CG C+ D E 
Sbjct: 381 DRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSE--ECRACSLCIQRCYHCGRCIIDTEY 440

Query: 269 EEAVCAGILCSSCWLQLPK 286
           EE  C  +LC+ C    PK
Sbjct: 441 EEMFCLELLCAVCSKPTPK 450

[Close]
BLAST of Cla97C01G006740 vs. Swiss-Prot
Match: sp|Q9LK24|FB327_ARATH (F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.1e-29
Identity = 90/259 (34.75%), Postives = 125/259 (48.26%), Query Frame = 0 

Query: 29  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIA 88
           H+A  LVL YL L E+L++  VC SLRD+V  +   W  I L D  L  R++D +L ++ 
Sbjct: 128 HDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLLKLT 187

Query: 89  RKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETL-SQH 148
           R+A G +R L L  C  I+D GL +V+  NP LTKL V GC  L+ AG+V  +  L S +
Sbjct: 188 RRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLKSSN 247

Query: 149 SHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXXXXXXXXXXXXXXXEHIDRSKLLCN-- 208
              +KSL+ GG      +  + L   L                    E   R    C   
Sbjct: 248 RLGVKSLITGGALYFTKEQFKELNLLL-----------GGDAKVGLQERKKRFYTSCRSE 307

Query: 209 ---EFQPVIDVQICPKCYDIRNVYDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGC 268
              E   V D++ICP C     V+DC  + C +K Q   +   CR C+ C+ RC ECG C
Sbjct: 308 FYLEDDRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSC 367

Query: 269 VDDDEIEEAVCAGILCSSC 280
           ++D E  +  C    C  C
Sbjct: 368 LNDCE-NKPFCFAFSCVVC 374

[Close]
BLAST of Cla97C01G006740 vs. TAIR10
Match: AT2G01620.1 (RNI-like superfamily protein)

HSP 1 Score: 177.9 bits (450), Expect = 9.5e-45
Identity = 106/297 (35.69%), Postives = 150/297 (50.51%), Query Frame = 0 

Query: 29  HEALFLVLSYL-PLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIA 88
           HE L +VL YL  LFELLSM  V  SLRDA+  +   W  ++++  LSSRL+D  L   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 89  RKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETLSQHS 148
            K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VPGC+ LTP G++  VE+LS+++
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVESLSKNN 136

Query: 149 HNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXXXXXXXXXXXXXXXEHIDRSKLLCNEFQ 208
           H L++L I G+     QHL  L  +L                                 +
Sbjct: 137 HKLETLHINGVNGFTKQHLSALYTYL-------------------------------SSE 196

Query: 209 PVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCV--DDDE 268
             ID+++CPKC ++R +  CSRE C  KQ +     CRGC  C+PRC EC  C+   D E
Sbjct: 197 GTIDLEVCPKCDEVRMIPSCSRESCNQKQRK-----CRGCWLCIPRCAECAVCLVGSDTE 256

Query: 269 IEE--AVCAGILCSSCWLQLPKCNHCNRSYCTRH---RHNV----SSSTTGFVCEIC 314
            +E                       N+ YCT H   RH +    ++S   F CE C
Sbjct: 257 SQEXXXXXXXXXXXXXXXXXXXXXXXNKPYCTNHSSRRHEIAITDAASRPSFECEAC 277

[Close]
BLAST of Cla97C01G006740 vs. TAIR10
Match: AT3G26000.1 (Ribonuclease inhibitor)

HSP 1 Score: 138.3 bits (347), Expect = 8.3e-33
Identity = 80/259 (30.89%), Postives = 131/259 (50.58%), Query Frame = 0 

Query: 29  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHILVDRRLSSRLSDYTLGRIAR 88
           H A+   L +L   +LLS+  VC SL   V  D L W HI + R L+ ++++  L  +  
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 89  KAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETL-SQHS 148
           +A G ++ L +++C +I+D  L  VV +N  + K+ VPGCT +T  G++  +  L S   
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGILSVLRDLKSAGK 320

Query: 149 HNLKSLMIGGIYNIENQHL-EVLKCHLFKNRXXXXXXXXXXXXXXXXEHIDRSKLLCNEF 208
             +K L + G++ +   H  E++      N+                 H   + + C++ 
Sbjct: 321 LQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVKQTIQKPRFY------HRGEACVSCDD- 380

Query: 209 QPVIDVQICPKCYDIRNVYDCSRERCKIKQEEQTLGDCRGCICCVPRCEECGGCVDDDEI 268
              +D+++CPKC + + VYDC  E CK K++     +CR C  C+ RC  CG C+ D E 
Sbjct: 381 DRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSE--ECRACSLCIQRCYHCGRCIIDTEY 440

Query: 269 EEAVCAGILCSSCWLQLPK 286
           EE  C  +LC+ C    PK
Sbjct: 441 EEMFCLELLCAVCSKPTPK 450

[Close]
BLAST of Cla97C01G006740 vs. TAIR10
Match: AT3G27290.1 (RNI-like superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-30
Identity = 90/259 (34.75%), Postives = 125/259 (48.26%), Query Frame = 0 

Query: 29  HEALFLVLSYLPLFELLSMRAVCVSLRDAVEHDVLPWLHI-LVDRRLSSRLSDYTLGRIA 88
           H+A  LVL YL L E+L++  VC SLRD+V  +   W  I L D  L  R++D +L ++ 
Sbjct: 128 HDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLLKLT 187

Query: 89  RKAGGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPAGVVRAVETL-SQH 148
           R+A G +R L L  C  I+D GL +V+  NP LTKL V GC  L+ AG+V  +  L S +
Sbjct: 188 RRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLKSSN 247

Query: 149 SHNLKSLMIGGIYNIENQHLEVLKCHLFKNRXXXXXXXXXXXXXXXXEHIDRSKLLCN-- 208
              +KSL+ GG      +  + L   L                    E   R    C   
Sbjct: 248 RLGVKSLITGGALYFTKEQFKELNLLL-----------GGDAKVGLQERKKRFYTSCRSE 307

Query: 209 ---EFQPVIDVQICPKCYDIRNVYDCSRERCKIK-QEEQTLGDCRGCICCVPRCEECGGC 268
              E   V D++ICP C     V+DC  + C +K Q   +   CR C+ C+ RC ECG C
Sbjct: 308 FYLEDDRVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSC 367

Query: 269 VDDDEIEEAVCAGILCSSC 280
           ++D E  +  C    C  C
Sbjct: 368 LNDCE-NKPFCFAFSCVVC 374

The following BLAST results are available for this feature:
BLAST of Cla97C01G006740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150124.14.3e-14479.75PREDICTED: F-box protein SKIP28 [Cucumis sativus] >KGN51477.1 hypothetical prote... [more]
XP_016903294.14.0e-13479.07PREDICTED: F-box protein SKIP28 isoform X1 [Cucumis melo][more]
XP_008467113.11.2e-13379.33PREDICTED: F-box protein SKIP28 isoform X2 [Cucumis melo][more]
XP_023551551.17.6e-12577.29F-box protein SKIP28-like [Cucurbita pepo subsp. pepo][more]
XP_022939676.13.8e-12477.60F-box protein SKIP28 [Cucurbita moschata][more]
BLAST of Cla97C01G006740 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KSU6|A0A0A0KSU6_CUCSA2.8e-14479.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G566290 PE=4 SV=1[more]
tr|A0A1S4E4Z1|A0A1S4E4Z1_CUCME2.7e-13479.07F-box protein SKIP28 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=... [more]
tr|A0A1S3CSR5|A0A1S3CSR5_CUCME7.8e-13479.33F-box protein SKIP28 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504545 PE=4 SV=... [more]
tr|A0A2P6R431|A0A2P6R431_ROSCH5.3e-9056.16Putative F-box domain, leucine-rich repeat domain, L domain-containing protein O... [more]
tr|A0A2I4F4P9|A0A2I4F4P9_9ROSI1.1e-8754.21F-box protein SKIP28 OS=Juglans regia OX=51240 GN=LOC108995504 PE=4 SV=1[more]
BLAST of Cla97C01G006740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZU90|SKI28_ARATH1.7e-4335.69F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1[more]
sp|Q9LU91|SKI14_ARATH1.5e-3130.89F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1[more]
sp|Q9LK24|FB327_ARATH4.1e-2934.75F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1[more]
BLAST of Cla97C01G006740 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01620.19.5e-4535.69RNI-like superfamily protein[more]
AT3G26000.18.3e-3330.89Ribonuclease inhibitor[more]
AT3G27290.12.3e-3034.75RNI-like superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR0179004Fe4S_Fe_S_CS
IPR001810F-box_dom
IPR032675LRR_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009788 negative regulation of abscisic acid-activated signaling pathway
biological_process GO:2000582 positive regulation of ATP-dependent microtubule motor activity, plus-end-directed
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0030286 dynein complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed
molecular_function GO:0045505 dynein intermediate chain binding
molecular_function GO:0051959 dynein light intermediate chain binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G006740.1Cla97C01G006740.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3DG3DSA:3.80.10.10coord: 28..198
e-value: 5.5E-15
score: 57.1
IPR001810F-box domainPFAMPF00646F-boxcoord: 28..68
e-value: 2.6E-5
score: 23.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR45375FAMILY NOT NAMEDcoord: 21..315
NoneNo IPR availableSUPERFAMILYSSF52047RNI-likecoord: 93..170
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 244..255
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 28..76