Cla97C01G005760 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G005760
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Protein YIPF
Location	Cla97Chr01 : 5535389 .. 5540539 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCACAGCGATACAATTCCTCTTCATCAATCGTCTCAGTCGGACATCGACGAGATCGAAAATCTCATCAACGCCAGCGTTCAAACCGGCCCCTCAACTGTTCTTCCAGCTCGTCCCCCTAGTCCTCCCAGGGCTTCCATTCCTGTTTCCTCCTCCCCCTTTTTACAATCCAATCTCCCCCCACTTCCCCCCAAATCGAGTATTCAGAAGCCGCCTACTGTCTTCCCTGCTCCCCCGCCCTTGCCTGTCTCCAGTAATGGGAGGTCTGATATGTCGGCGTCTGGTTTCGGATCACCGCCCAACACTCTCACCGAACCGGTATGGGATACGGTCAAGAGGGATCTGTCCCGGATCGTCAGCAATTTGAAGCTTGTGGTATTTCCCAACCCTTTCCGTGAGGACCCTGGAAAGGCTTTGAGGGATTGGGATCTGTGGGGGCCTTTCTTTTTCATTGTGTTCCTCGGTCTTACTCTTTCCTGGTCTGCATCGGTCAAGAAGGTTAGCTTTGTAAAATTTGAGTTGGTTGAAATCGTTAATTGCTTGCGTTTTGTTTGATTTTAGTTCATATGCAAGTCTCAGTTTGGATCAAGCTTTTTAGTTGTTTATGATGTGATGTTCCTTATATTAGCCTGTTTTGGCCTTGCCATGCTCTGGTCCGGCTTCAACTAGCTATCTGCAGTTATTAAGATTTCAAATTGAGTTGAACTCATGGTTGAAAGTCAGATTTTGCTTAGTATTTTATATCTCAGATGAAGCGGTAAATCAAATGACTGGAGCGCTTTGTTTAGATTTCTTGAAACTGTAATGGCTAGTTTGTTTCATCGAATTTTAGACAGTTGCAATACTAGGGAAATTTTAGGAACACTTACAAGCTTCTATCAATGGCTGAAAGCTAATTGATTAGATGCAAAAGTGTTGTAAATAGTTTGGTGGAATCCATAATTGCAGATACAGTATGTTTAAATGGTTTGTAGGACATAAACCAATATCTATGTGCTAGAATACAGCGTGGATCTTCAGGAGATTGAAATTTGCATGGTTAAAACCTCAAATTCTAACCTGCATTATGACTTTTGTCAGAAAATATTTAAAAGAGGAAATGTATATATGACTGCGACTGCAAAGAGTTCTCTGTCTAAATTAATCTAAGGCAGTAAAGCTGCTACTTGGTATCAAAAACAAATGTTGTTTCTGAATCTGCTAATATAAACAATATCTCCTACTTCTTTAGGCAGGGGTTGTTGCTCACTAGGGTATGTACATTTATGACTATGGATACTTGAACCAAGGGATATTACCATATTTTAGTTATACCTTCACCCAAGAGAAATTTAGAATTTCTGGAGAAACCTTGGTTCCTCATTTCATTGGTAAGATGAAATTACAAAAGAAGGCAAACTATATGCTAAAAGAATTACAAAAACCACTTTGAATGGGCTATAAGAGAAGTGAGGCTATAGGTATTAAAGAGAAGGGATAATTTACACTAAGAGAGAGTAACATTAGATTTTTATTTTATTAATTTTTTAGTACAACAAATGGGGGTATGAGGATTTGAGTCTCTGACCTCGAGGGAGGTAATGCATGTCACTTACCACTAAGCTTTGCTTACTTTAGTAGTAAATTAGTAATATGAGATGAACGTTTAAAAAAAAACGTCAAGTTTGGTGGCTTTGTCCTCGAAAATGCAATGATTGCTTTCCAACCAAACAAACCAAAGAAATGCTCTGATGAAGTTGTTCCGTAAGACTTCCCTTTCTTTGCCTTAAGTGGTGACAGATTAGACTAGCTCAAGTGATGTGATCTTGTCTCCTGTGAGAGCTATATGCAAATTAAACGTCCAGTTGAATGCCATAGATTAAGATCCATGGAAGACTATTCTCAAGAATCATGCACACTTAAAGCTATTTCTTATGGTTCTTATATTATTTTTTACATTATATGATTTTACACTTAAAGCTAGTTCTTATATTAATTGTTTTATTTTCTGCACTATATGATTTTACTGAGTTATTATTCCCTCATTAACCCTTTCTATAGTCTCTAGACTCTCTACTGGTAAAGATAAAGTTAGGTTTGAATTCTTTAGTGCAGCCCTCAGTCTCCCGTCATGTTCAATGAAAGTTGGATTTCTCTTATGAAAATGTTTAATTGTCGTTAGCTTGTACAATTTACTGCTTTGAACTGGAAGCACTTCACTAAAAGTGGGTTGTTATCATCCACAAGTATAAATGGAATTTGGTTTTCTAGATGAAAGTTAGTTTAGGCCCAAAGGAGAAATTTTCTTCAAGTGCTGATGTTTAAGAAGAATGCATGAAATTGCAATTTATTCTTACTTGGGAAAAATGAATGTACGAGAAAGGTTTTCAATCAATCCCAGCTAGTGTGGCCTATATAGGAAGAGTCTTGGAAGAAGTAGAATAACAAGGTGTTTAGAGGGTTGGGGAGGGATCCTAGTGATGTAAGGCTTTTTCCTCTAGTTAGGCTCCCTTCGTTTGTGGGTTTGATTTTTTCGTATGTCCTTGTATTCTTTCATTTTTTTTTTTTCCTCAATGAAAGTTGTTGTTTTCAATAGTGTTGAAAACCACCTATTCTGTGTGATTTTCCTTAAAGAGAGCTTGGATGGTCTCCAATTGTATAGATGTAGCTAGCAAGTACCAAATGATCTCTCATAGAGGACAAAGGATATAAACGGGGAAATGTAATGTAGAAGGGTTTATCTCCTACCCAACTTATCCTCCTAGAAGTATGTTTCCTTCCCATCACCTACAAAGTAATGGACCATGTAAGAAAAGGAAGGGAGCTCATTGGATATTACTTCGAAGTCTTGGATCCCACCATCAGCATATCCTCCCGAAGTACATCTCGTTCCCACCAGCAAAGATGCATCTTTTGCCTGATATCTTGGATCCTTCTAGGAGCTCTCCCTCTTTCTTGCTTGGTTTTCGTTGTGCGTTTTCTGATAGGGTAACTACGGATGTCATGACTCTTTTGTCTTTTATCTTCCGTAAGGGTGTTTGAGCTTAGACTGGGAGGAGGGATGTTCTTTTTTCAAGTCCTAACCATATTGTAGGCTTTCTTGTAGCTTGTTTTTCCAATGCTCGGTGAACCTTTTTCCCTCTAGTGAGTCCGCATTTTCTTCTTAGTGGAAGTTGAAAATTCCAAAGAACATTAAATTCTTCATTTGGCAGGCTATGCATGGAAGAGTTGACACTCTTGATCGACTTTCAAGAGAGTTTTCTTTTGTGATAGGGCCATTTTGTTGCATTCTTTGTTAGAGGGTGGAGGAAGAGTTGGATCTATCCTCTAGAGCTGCGATTTTGCATGGTTTGTTTGGAGTTAGTTTTTTGATGCGTTTGGGTTTTAGTTTGCCAGACAGAACAGATTATAGGGGGAGATGATTGAGGAGCCCTTCTCCATGCACCATATTGAGAGAAGGAAAGTTCCTATGGTAACCGGGGGTTTATGGGTTGCTCTGAAGTTTTTTTTTCCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTATTTATTTGAGTTCCTTTTTTGGACATGGTTTTTTGGATGCCTATGTATTCTTTCATTTTTTTTCTCACAAAAAAAAAAGGCAGGTACCAGAGGATTCTGGCACCAGATTTTGTCCTGGCGGATCCTCAAAGTGAATCAGAAAGTATTTAGAGAAATTTATGTTGTATTACATTTTTGGAGAGAAAGGCATAGAAGAATGGGGGAGTTGCATTGGGACTCTTGTGTCGCACATCTCTCTTGTATTGTTTTGTTCTTGTCAATGTACACATCTCTCTTGTATTGTTTTGTTCTTATTTATGATGCTTAATGGAGAAGGACGATAAAAATATCTTTACAACCTTGTTGTTTTCATATATTCCAGAATCACCTTAGCATTTGAAACATTCTTAACCATTCTCTATTTATATATTTGACATTTTTCAGCCAATGTTTGCCCTTTATTCACATTCTCTATGTCTACTTTCACTGAACTGTCATTGATTAAATAAAGGCTTTAAAATATTTGTTTTGGTCCTCTACTAATGATATCAATTGATTCTCTTTTCAGTCTGAGGTTTTTGCTGTTGCATTTGCACTTCTTGCTGCTGGTGCAGTGATTCTGACCTTGAATGTGCTTCTTCTGGTAACTAAATCTTTCAGTCTTCCAGCTCCCTTCCCACTCTCCGATTCAAGAACATGTTTTTACCATCACATTTGTTTTTATCCATTAAAAAATAGAGTTGATACTTATTTTGCTAGAAACCCATTTGGTAACCATTTGATTTTTTGTTTTTAATTTTTAAAAATTAAGTCTATAAATACTCCTTCCACCTCTAAATTGCTTGCTTTGTAATCTACTTTTTACCAGTCAAAATTTGAAAACTAAAAAAAAGTAGTTTTTTAAAACTTATTTTGGTTTTTGAAATTTGACTAAGATTTCAACTTTAGTACTTAAAAAATATGTAAACCGTTGTAAGAAAAAAAGAGAAAATAAGCTTAATTTCTAAACACCAAAAACGAAAAATGAAATAGTTAGCAAACAGATTTTTGAACCCACCTTGGTTTGCTCAAAATGACTGGGGACTTGCACATTGGTTACTGCAGGGTGGGCATATAATATTCTTCCAAAGCTTGAGTCTGTTGGGATATTGCCTGTTTCCTCTAGATATTGGAGCATTGATCTGCATGTTGAAAGACAATGTAATAGTGAAGATAGTTGTGGTATGTGTGACATTGGCATGGAGTTCATGGGCTGCTTATCCTTTCATGAGTTCAGCAGTGAACCCAAGAAGAAAAGCTCTTGCACTCTATCCTGTGTTCCTTATGTATGTATCAGTTGGTTTTCTCATCATTGCCATTGATTGAGATGCATCAACAATGGTGTTATTAAAAGGGTTTTGGTAAGAAGAAAGAGATTGAAATGATGATTGAGCAATCATTTAGGAACTTCATGCAGTGATCAATATTCTCTCACTTTACTGTAACTTTTTCATTTTGACTTATATCATATAATGTCTTGAAACTCAGATCTGTCTACATCATCATATTCACTGTCTACAAATTTTCTTGATGGAAATCCAAAACTGTGTAATATTTCTTGTAATTAGTGATGGCTTCATTTGTTTTAGATTTAA

mRNA sequence

ATGTCGCACAGCGATACAATTCCTCTTCATCAATCGTCTCAGTCGGACATCGACGAGATCGAAAATCTCATCAACGCCAGCGTTCAAACCGGCCCCTCAACTGTTCTTCCAGCTCGTCCCCCTAGTCCTCCCAGGGCTTCCATTCCTGTTTCCTCCTCCCCCTTTTTACAATCCAATCTCCCCCCACTTCCCCCCAAATCGAGTATTCAGAAGCCGCCTACTGTCTTCCCTGCTCCCCCGCCCTTGCCTGTCTCCAGTAATGGGAGGTCTGATATGTCGGCGTCTGGTTTCGGATCACCGCCCAACACTCTCACCGAACCGGTATGGGATACGGTCAAGAGGGATCTGTCCCGGATCGTCAGCAATTTGAAGCTTGTGTCTGAGGTTTTTGCTGTTGCATTTGCACTTCTTGCTGCTGGTGCAGTGATTCTGACCTTGAATGTGCTTCTTCTGATTTAA

Coding sequence (CDS)

ATGTCGCACAGCGATACAATTCCTCTTCATCAATCGTCTCAGTCGGACATCGACGAGATCGAAAATCTCATCAACGCCAGCGTTCAAACCGGCCCCTCAACTGTTCTTCCAGCTCGTCCCCCTAGTCCTCCCAGGGCTTCCATTCCTGTTTCCTCCTCCCCCTTTTTACAATCCAATCTCCCCCCACTTCCCCCCAAATCGAGTATTCAGAAGCCGCCTACTGTCTTCCCTGCTCCCCCGCCCTTGCCTGTCTCCAGTAATGGGAGGTCTGATATGTCGGCGTCTGGTTTCGGATCACCGCCCAACACTCTCACCGAACCGGTATGGGATACGGTCAAGAGGGATCTGTCCCGGATCGTCAGCAATTTGAAGCTTGTGTCTGAGGTTTTTGCTGTTGCATTTGCACTTCTTGCTGCTGGTGCAGTGATTCTGACCTTGAATGTGCTTCTTCTGATTTAA

Protein sequence

MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNLPPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLSRIVSNLKLVSEVFAVAFALLAAGAVILTLNVLLLI

Homology

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BLAST of Cla97C01G005760 vs. NCBI nr
Match: XP_004143629.1 (PREDICTED: protein YIPF6 homolog [Cucumis sativus] >KGN50415.1 hypothetical protein Csa_5G173430 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 8.9e-63
Identity = 146/192 (76.04%), Postives = 148/192 (77.08%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKS+IQKPPTVFP PPPLPVS NGR D+SASGFGSPPNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTIQKPPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLSRIV 120

Query: 121 SNLKLV-----------------------------------------SEVFAVAFALLAA 152
           SNLKLV                                         SEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

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BLAST of Cla97C01G005760 vs. NCBI nr
Match: XP_008467227.1 (PREDICTED: protein YIPF6 homolog [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 5.8e-62
Identity = 145/192 (75.52%), Postives = 147/192 (76.56%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKS+ QKPPTVFP PPPLPVS NGR D+SASGFGSPPNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTNQKPPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLSRIV 120

Query: 121 SNLKLV-----------------------------------------SEVFAVAFALLAA 152
           SNLKLV                                         SEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

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BLAST of Cla97C01G005760 vs. NCBI nr
Match: XP_022159810.1 (protein YIPF6 homolog [Momordica charantia])

HSP 1 Score: 239.6 bits (610), Expect = 7.0e-60
Identity = 141/192 (73.44%), Postives = 147/192 (76.56%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQ+GPSTVLPARPPSPPRASIPVSSSPF+QSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQSGPSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKS+IQKPPTV PAPPPLPVS NGR D+S++GFGS PNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTIQKPPTVSPAPPPLPVSGNGRPDISSTGFGSAPNTLTEPVWDTVKRDLSRIV 120

Query: 121 SNLKLV-----------------------------------------SEVFAVAFALLAA 152
           SNLKLV                                         SEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

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BLAST of Cla97C01G005760 vs. NCBI nr
Match: XP_022995736.1 (protein YIPF6 homolog [Cucurbita maxima])

HSP 1 Score: 236.5 bits (602), Expect = 6.0e-59
Identity = 141/192 (73.44%), Postives = 145/192 (75.52%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQT  STVLPARPPSPPRASIPVSSSPF+QSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKS+ QKPPTVFPAPPPLPVSSNGRSD S +GFGS PNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTNQKPPTVFPAPPPLPVSSNGRSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120

Query: 121 SNLKLV-----------------------------------------SEVFAVAFALLAA 152
           +NLKLV                                         SEVFAVAFALLAA
Sbjct: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

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BLAST of Cla97C01G005760 vs. NCBI nr
Match: XP_023533751.1 (protein YIPF6 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.8 bits (595), Expect = 3.9e-58
Identity = 139/192 (72.40%), Postives = 144/192 (75.00%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQT  STVLPARPPSPPRASIPVSSSPF+QSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKS+ QKPPTVFPAPPPLP S+NGRSD S +GFGS PNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTNQKPPTVFPAPPPLPASTNGRSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120

Query: 121 SNLKLV-----------------------------------------SEVFAVAFALLAA 152
           +NLKLV                                         SEVFAVAFALLAA
Sbjct: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

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BLAST of Cla97C01G005760 vs. TrEMBL
Match: tr|A0A0A0KL60|A0A0A0KL60_CUCSA (Protein YIPF OS=Cucumis sativus OX=3659 GN=Csa_5G173430 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.9e-63
Identity = 146/192 (76.04%), Postives = 148/192 (77.08%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKS+IQKPPTVFP PPPLPVS NGR D+SASGFGSPPNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTIQKPPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLSRIV 120

Query: 121 SNLKLV-----------------------------------------SEVFAVAFALLAA 152
           SNLKLV                                         SEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

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BLAST of Cla97C01G005760 vs. TrEMBL
Match: tr|A0A1S3CT87|A0A1S3CT87_CUCME (Protein YIPF OS=Cucumis melo OX=3656 GN=LOC103504629 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.8e-62
Identity = 145/192 (75.52%), Postives = 147/192 (76.56%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKS+ QKPPTVFP PPPLPVS NGR D+SASGFGSPPNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTNQKPPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLSRIV 120

Query: 121 SNLKLV-----------------------------------------SEVFAVAFALLAA 152
           SNLKLV                                         SEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

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BLAST of Cla97C01G005760 vs. TrEMBL
Match: tr|A0A2P5C734|A0A2P5C734_PARAD (Protein YIPF OS=Parasponia andersonii OX=3476 GN=PanWU01x14_178240 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-45
Identity = 121/192 (63.02%), Postives = 131/192 (68.23%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSHSDT+PLH SSQSDIDEIENLINASVQ+GP+TVLPARPPSPPRASIPVSSSPF+QSNL
Sbjct: 1   MSHSDTVPLHPSSQSDIDEIENLINASVQSGPATVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLSRIV 120
           PP     + Q+PPTV       P S NG   ++++GFGS PNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPXXXXXANQEPPTVLVXXXXXP-SGNGNPSIASTGFGSGPNTLTEPVWDTVKRDLSRIV 120

Query: 121 SNLKLV-----------------------------------------SEVFAVAFALLAA 152
           SNLKLV                                         SEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

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BLAST of Cla97C01G005760 vs. TrEMBL
Match: tr|A0A200QPQ2|A0A200QPQ2_9MAGN (Protein YIPF OS=Macleaya cordata OX=56857 GN=BVC80_1793g37 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-44
Identity = 120/195 (61.54%), Postives = 134/195 (68.72%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSH+DT+PLH SSQSDIDEIENLINASVQ+GP+TVLPARPPSPPRASIPVSSSPFL SN+
Sbjct: 1   MSHNDTVPLHPSSQSDIDEIENLINASVQSGPATVLPARPPSPPRASIPVSSSPFLASNI 60

Query: 61  PPL---PPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDLS 120
            P    P  +SI  PP +   PP  P S++ R ++++SGFGSPPNTLTEPVWDTVKRDLS
Sbjct: 61  QPTYQKPVPASIPVPPAL---PPVNPQSNSARGNIASSGFGSPPNTLTEPVWDTVKRDLS 120

Query: 121 RIVSNLKLV-----------------------------------------SEVFAVAFAL 152
           RIVSNLKLV                                         SEVFAVAFAL
Sbjct: 121 RIVSNLKLVVFPNPNREDPGKALRDWDLWGPFFFIVFLGLVLSWSASVKKSEVFAVAFAL 180

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BLAST of Cla97C01G005760 vs. TrEMBL
Match: tr|O64614|O64614_ARATH (Protein YIPF OS=Arabidopsis thaliana OX=3702 GN=MSF3.22 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.7e-44
Identity = 123/196 (62.76%), Postives = 127/196 (64.80%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPV----SSSPFL 60
           MS  DT+PLH SSQSDIDEIENLIN SVQ+GP TVL ARPPSP R SIPV    SSSPF+
Sbjct: 1   MSQGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFM 60

Query: 61  QSNLPPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDL 120
           QSNLPPL P SS QK  T  P PPPLP  SN  +   AS FGSPPNTLTEPVWDTVKRDL
Sbjct: 61  QSNLPPLHPSSSAQK-VTHVPVPPPLPAVSNSSNFQGASAFGSPPNTLTEPVWDTVKRDL 120

Query: 121 SRIVSNLKLV-----------------------------------------SEVFAVAFA 152
           SRIVSNLKLV                                         SEVFAVAFA
Sbjct: 121 SRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFA 180

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BLAST of Cla97C01G005760 vs. TAIR10
Match: AT2G18840.1 (Integral membrane Yip1 family protein)

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-47
Identity = 123/196 (62.76%), Postives = 127/196 (64.80%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPV----SSSPFL 60
           MS  DT+PLH SSQSDIDEIENLIN SVQ+GP TVL ARPPSP R SIPV    SSSPF+
Sbjct: 1   MSQGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFM 60

Query: 61  QSNLPPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMSASGFGSPPNTLTEPVWDTVKRDL 120
           QSNLPPL P SS QK  T  P PPPLP  SN  +   AS FGSPPNTLTEPVWDTVKRDL
Sbjct: 61  QSNLPPLHPSSSAQK-VTHVPVPPPLPAVSNSSNFQGASAFGSPPNTLTEPVWDTVKRDL 120

Query: 121 SRIVSNLKLV-----------------------------------------SEVFAVAFA 152
           SRIVSNLKLV                                         SEVFAVAFA
Sbjct: 121 SRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFA 180

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BLAST of Cla97C01G005760 vs. TAIR10
Match: AT4G30260.1 (Integral membrane Yip1 family protein)

HSP 1 Score: 157.5 bits (397), Expect = 6.4e-39
Identity = 109/194 (56.19%), Postives = 116/194 (59.79%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60
           MSH+DTIPL+QSSQSDIDEIEN++N S Q+GP TVLPARPPSP R SIPVSSSPF+QSNL
Sbjct: 1   MSHNDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPARPPSPIRPSIPVSSSPFVQSNL 60

Query: 61  PPLPPKSSIQKPPTVFPAPPPLPVSSNGRSDMS--ASGFGSPPNTLTEPVWDTVKRDLSR 120
           PP                            + S   SGFGSPPNTLTEPVWDTVKRDLSR
Sbjct: 61  PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKSIGGSGFGSPPNTLTEPVWDTVKRDLSR 120

Query: 121 IVSNLKLV-----------------------------------------SEVFAVAFALL 152
           IVSNLKLV                                         SEVFAVAFALL
Sbjct: 121 IVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALL 180

The following BLAST results are available for this feature:

BLAST of Cla97C01G005760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143629.1	8.9e-63	76.04	PREDICTED: protein YIPF6 homolog [Cucumis sativus] >KGN50415.1 hypothetical prot...	[more]
XP_008467227.1	5.8e-62	75.52	PREDICTED: protein YIPF6 homolog [Cucumis melo]	[more]
XP_022159810.1	7.0e-60	73.44	protein YIPF6 homolog [Momordica charantia]	[more]
XP_022995736.1	6.0e-59	73.44	protein YIPF6 homolog [Cucurbita maxima]	[more]
XP_023533751.1	3.9e-58	72.40	protein YIPF6 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C01G005760 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL60\|A0A0A0KL60_CUCSA	5.9e-63	76.04	Protein YIPF OS=Cucumis sativus OX=3659 GN=Csa_5G173430 PE=3 SV=1	[more]
tr\|A0A1S3CT87\|A0A1S3CT87_CUCME	3.8e-62	75.52	Protein YIPF OS=Cucumis melo OX=3656 GN=LOC103504629 PE=3 SV=1	[more]
tr\|A0A2P5C734\|A0A2P5C734_PARAD	1.9e-45	63.02	Protein YIPF OS=Parasponia andersonii OX=3476 GN=PanWU01x14_178240 PE=3 SV=1	[more]
tr\|A0A200QPQ2\|A0A200QPQ2_9MAGN	1.2e-44	61.54	Protein YIPF OS=Macleaya cordata OX=56857 GN=BVC80_1793g37 PE=3 SV=1	[more]
tr\|O64614\|O64614_ARATH	4.7e-44	62.76	Protein YIPF OS=Arabidopsis thaliana OX=3702 GN=MSF3.22 PE=2 SV=1	[more]

BLAST of Cla97C01G005760 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C01G005760 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18840.1	1.3e-47	62.76	Integral membrane Yip1 family protein	[more]
AT4G30260.1	6.4e-39	56.19	Integral membrane Yip1 family protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015774	polysaccharide transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005768	endosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G005760.1	Cla97C01G005760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..102
None	No IPR available	PANTHER	PTHR21236:SF16	SUBFAMILY NOT NAMED	coord: 127..151
None	No IPR available	PANTHER	PTHR21236	GOLGI MEMBRANE PROTEIN YIP1	coord: 1..126 coord: 127..151
None	No IPR available	PANTHER	PTHR21236:SF16	SUBFAMILY NOT NAMED	coord: 1..126

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G005760	Cla002341	Watermelon (97103) v1	wmwmbB238
Cla97C01G005760	Csa5G173430	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G005760	MELO3C005378	Melon (DHL92) v3.5.1	mewmbB009
Cla97C01G005760	ClCG01G005520	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G005760	CSPI05G08360	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G005760	Cucsa.166470	Cucumber (Gy14) v1	cgywmbB288
Cla97C01G005760	CmaCh02G010420	Cucurbita maxima (Rimu)	cmawmbB601
Cla97C01G005760	CmaCh15G014070	Cucurbita maxima (Rimu)	cmawmbB285
Cla97C01G005760	CmoCh15G014780	Cucurbita moschata (Rifu)	cmowmbB267
Cla97C01G005760	CmoCh02G010560	Cucurbita moschata (Rifu)	cmowmbB576
Cla97C01G005760	Lsi09G005850	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G005760	MELO3C005378.2	Melon (DHL92) v3.6.1	medwmbB007
Cla97C01G005760	Carg08435	Silver-seed gourd	carwmbB0741
Cla97C01G005760	Carg20773	Silver-seed gourd	carwmbB0774
Cla97C01G005760	CsaV3_5G005750	Cucumber (Chinese Long) v3	cucwmbB351
Cla97C01G005760	Bhi12G000487	Wax gourd	wgowmbB064

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G005760	Cucumber (Gy14) v2	cgybwmbB319