Carg08435 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08435
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein YIPF
Location	Cucurbita_argyrosperma_scaffold_022 : 281642 .. 288300 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAATGTCTCACAGCGATACAATTCCTCTTCACCAATCCTCTCAGTCGGACATCGACGAGATCGAGAATCTCATCAACGCCAGCGTCCAAACCAGCTCCTCCACTGTTCTTCCAGCTCGTCCCCCAAGTCCTCCTAGGGCTTCTATTCCTGTTTCTTCCTCACCGTTTATACAGTCCAATCTCCCTCCACTTCCCCCCAAATCAACTAGCCAGAAGCCGCCGACTGTCTTCCCTGCTCCGCCGCCGCTGCCTGCCTCCAGTAATGCCCGGTCTGATACATCGCCGACTGGATTCGGATCGGGGCCCAACACACTGACGGAGCCGGTATGGGATACGGTCAAGCGGGATCTGTCCCGGATCGTCAACAATTTGAAGCTTGTGGTTTTTCCCAACCCTTTCCGTGAGGACCCCGGAAAGGCTTTGAGGGATTGGGATCTGTGGGGGCCTTTCTTCTTCATTGTGTTCCTCGGTCTTACTCTTTCGTGGTCTGCATCGGTCAAGAAGGTCAGCATCGTAAAGTTTAAGTTAGTTGAAATCCTCAGTTTACTGTCTTCTGTTTGATTTAAGTTCGCGTACAAATTTCAGTTCGGATCAAGCTTTTTAGATGTTTGTTGTGTTCCCTATATCAGTCTTTTATTTAACCTTGTGATGCTCTGATTCGGGTTGAACCAGCTATCTGCAATTATTTAGATTTGAAATCGAGTTGAATTCATTGTTGGAAGTCAAATGTAGCTTAGCTTTAGTATTTTGTACCTTAAGAGTATCCAGAGTAGCCTAAATCAAGTGACTGAAGCGCTTTTGTTTAGATCCCTTGAAACTGTCTTGGCTAGTTTGTTTCATTGGATTTTAATAGGAACCGATGACTCTAGATACTTAGAATTTAGAACATGCCGGAAATCACAGGGACATTGCATAATCGATTTTATGAGAAAAGATTTAGAAGAGTAAATATGGATCTGGACTGTCAAGATTTCCATTTCTCGTTCGTTAATCCAAGGTAGTAATGTTGTTACTCTGATATAAAAATAACAGTGTCATGTACTGAATCCTTAAATAGAAGTAACATCTGCTCTTTCTTCAGGCAGGGACTTGTTCCCTATGATATGTACATATACGACTATGGATGCTAGACCAAGGCGTATTACCATTCTTTAGTTATAAGTTCACCTCCAAGAAATTTAGAATCCATGGAATCTCAAAGTTACTTCTTGTGGTTATTGTGTTATTTCACATTATTTGATCTTACTGAGATGTTATTCCCTGTTACCCCTTTCTATAGTATCACTCTTGATGCTGGGTATGACTTCTTTAGTGCAGCCCCTTGTCTCCTATCCCATTCAATGAAAGTAATTTCTCTTATGAAAACATTTAATTTTTTCATTTGCTTGTACTACTCATTTCTTTGAAACTGAAATACTTCACTAAAAGTGAGCTGTTATCCAAAAAAAAAAAAAAAAAAAAAGGAATATGTTTTTCTAGCTGCAAATTAGTTTAGGGTCCAAAGAGAAATTTTCTTCAAGATGTGGAAGTTTAAGACTGCATGAATGGCAATTATTCTTGTGATTATACCTGGGCAAACCTATGTATGAGAAGGATATAACGGAGATATCTGAGGAGTTCAATCAATCTTAGCTAGTGTGGCTTATGTAGAAAGAGTGCTGGAAACCACTTCTTTGTTATTTTCCTTAAAGAGCTTGGATGCTCTTCAACTGTATTCGTGTGGCTGGTTGGTGTCGATCATACTTGCAGCAGATTTTGTTGCGGGTGATCCTCAAAGTGAATAAGAAAATATTTTGGAAAAATTTATGATGTGTGTTTTGAGAGAAAGGTACAGAAGAATTGAGGAGTTTCATAGAGACTCTTATCAATGCAAATAGAGTTTTTTTTGTTCGTCTGTAGATGGTGCACTCTGGACAAATTCTTTTAGTAACCATGCTTCCTCCGGAATACCTTCTTGTTGGATGGAGTTTCTTGTCTCACACACCTCTCTTGTATTGTTTTGTTCTTATCATTGATTTTTCTTGTGTTTATGTATATGTTGGCAAAATTATGAGACCCTTCTTTCTTTTTCTTTACCCTACCTAAGCCTAACTATGAAGAGAGTAGGTTGTGACCCTCATGTTGTGACAAGAGAAGTGGCGACCCTCAATCCGGCCACACGAGGGCATAGACGAGTGCCATAATTCGACCGAGGAAGACGGTGCATAATCTAACATACCATACAGAGTGGACATTGAAGAGAAGTCGAGGCAAAAGCAAGATAAGGGCAACGAGTAAACAAGAATGTCAAAGATAGGCTTGTTGAAGGGTCGGGTATGGCCCGGACCTTAACCTCAAAAGTTGGGGTTCCGGAAGTAATTTGGGTATATGGTTATGAAGTTTAATTCCGTCCATATGAAATATGAACGCTCGTCAAACAGACGCTCCACGACATCGCATGATCGTTCGCCAAAATGACGTCTACCCGAGGAGTATTGAAAATGCATCAAAATGTACTATAGGGGGGGACATGGTGTCGAGGCCTAAACAAGCTATCTTGTGACACATGCGTGTGTCACAGTGAGGGTAAGCGTTCTGAGACAAGTGTCTCGGGCAACTTCCTTTGAAATGGATTTTTCAAGGACAATACCGGGCGGCACGAGTGTGCCGGTATTGCGCCTTAGCCCGCATGTTGAAGTTTGGATTATGCACCTGCTATCTGGTACAGTATCTATAAATGACAAGCATAGGCAAGGGAGGGCCAATGCCTAGATAGAACCAAGATGGATGGATGTTCAGGATGTCCGATGAGATAAGCGATACGTGAGCCCATTCTCGATGGCATGACCGAGTGAGTTGCAATGGCCAACAACACCCGAGACTAGGGATGACGTCAAGACATATGGGCCATGTCGATTGGGAACCAAGAGGACAAGATGAGATGCGATGTTGCATTGGGAGACCTTGGCCTGAGTAGAGGCTAGGTTGAGCCGAATGACTTGGCTAGATGTAGAGGCAAGTCGGTTGTGTCGTAGAAGATTGAACATGCACGCGCAGGCAGCGTGTGGTCAAACAAGCTTAGATTCCCGCACAAGCGATTTTCGGTTGGCGAAGACAAACCTTGCCTAAGGTCCGACAAAACCACAAAGCGAGGCAAAAAATATATATGGGGCTTGAGTTCTCCTTAATGTTGGTCACGAGTATGTCAAGATCACGACGCCGCACGGTTGAATACGACCGTGACGCCTAGCAAGGTTGGATCAAACTATTAAACTTCCCTCCCAATCCCACTTTCTGCTGGAACAGGGAAAAGCAAATGCCTTTGAGAATGGAATCTAGATAGCATTGAAGTAGATTTGGATGTCTACAAATTGTCTCAATTGCATTGGTCCTTGCATTTTACGACGTCAGATGACTTAGAATGGTCATATCCTTCTATAGTTCTATTTAAAGATCAAGTTTGATCGCAGATTTGGCTAAATATCCTAAACCATACGTATGTATGTATTTGAAAAAACTTATAAGTTGTCCTTATTTATGATGTGAATGCAGGTATATTTATTTATTATTATTATTTTATAGGAAATAAACATAATGCAGATGTATGATAAAATATGTTTATAACCTTGTTGTTTCCTTATATTCCACAACCACCTCCTTACCATTACATTTGAAACATTTTTAACCATTCTCTATATATCTATTTGATGTTTTTCCAACCTGTCATTTGCCCTTTATTCTCATTCTTAATTTCTACTTTTGTTGAATTATCATTGATAAAAATAGAGGTTTTCTAAAATTTTGTGGGTATCCTACTAATGGTATTCATTGATTTCTTCTCAGTCTGAGGTGTTTGCTGTTGCATTTGCACTTCTTGCTGCCGGTGCAGTGATTCTGACCTTGAATGTGCTTCTCCTGGTAACTAAATCTCTCTTTCACTCTTCTCCCTGCTCCCTTTCCACTCTCCCAACCTATTCAAGGACATGTTTTAATCATCTTTCACTTTATACTCGGACAATTTTGTACGTTGCTGCCTTCTTGCGAGTGTTCATTGTTAGGATTTAGGAGTGTACATGTTGGATCTAGTGTTATCTGGTTTTTAGTAAACACGATTGCTGAAGCAACTGTGTTTGCTTGAGAAAAATTGAAATTGATCAAAACCCACTTTTACAGAAAATTGGAATGACCTCTTTACGAGAGCCTACTATGATATATTTTTTCTATTTATAAAACTGAACTTCATAGATCTCTAGGTCAGTTCTCTTTGGCAGTACGGTAAAAGATGTCCTATAGCTCTACCAAAAAGCCTTAGTTCCTTGTTGCCAAATGTGTCAGCTAATTTTCTTTCTGAGCTCATATTGGTAATTGCACCATTTTAACATACGGGATCATCTCCTTCGTTTGACTTTCTCAACCAAAGCTCTCTCTTCGAGAAATATGTCAATGAGATTAAAGGGGGTGGTTGGATGGCTTAAAGTCTAATGATGGGGAGACCTATTTAGTGACGATGAGTTTCAATTTTAGGTCTTTGCAATTGATTTTGTATAATCTCCTTGTTGAAAGACTCAAAACACTTGAACTTTGTTTACTTTTTTTTTTTTCTTTTTCTTTTTTAAATCTGAATAAGGAAATAAATTATGCATGGACAGTGAAAGGTTACAAATGAAGCAGTAACAAAAACTTAAGAATCCCAACTTAAACTATCGATACTAAAAAATCTACTCCCATTTCAACACCAAACCTCTCTGTATACAACCCACGTGCTTTCCCAAAAAGAAAGTCCACAAAAAGCCTCCTTATCAGAATTAGTAACAAGGGAATATAATTAGAGAAGGGATGAGAGAGGGAGCATGAAGAAGAACAATGAAACTTAGTTTTATCAAAGCTTTCTCCCAATTCACGTTCCTTTTGATGGAAGATTTGATAGTTCGTCGTCATGTTCCCTAGCCAAACACTTAGTTGCATTGACCCATGAAATCTTGACTTTTCATTTATATATATACATATATGTATATTATGTATATGTATATTATTTTAATTGAATCTTAGCCAAAATATTAACTGGCCACTTCTTCAAATACGCACGACCCTTGAAATTTATGTAATAACCAAAACCAACGTTGCCAATTGAAAGAGCAATGAAAAAAATAATGGTTCACCTCGTATTTACACACACCTACCTGACCGAAGACTCATATTAGAGAAGTTCTTATGAGTGCCTTCTGCTGTGTTTAAGCCTCCATGATACATAATACAATAGTCCATAAAAGATTAATTGGTAATTTGCGTTTCCATTTCATTAAAGCCAATTCAACAATTTCTTACATTTGTGAAGTAAAAGAACCAAGATTTTATCTAGAACATCCCCGGTGAGTTTAAGCATTTTCATTTTCTATCTTCCATTGGATAAATACAATCATCGTTAGTTAAATTTTCTCTTGACAAAAAATTACAATGACCAATATTCTCCTCCCAAACACCTTCTAATAACACCTCTTTTAACCGTTAAAATTCTAGGAAAGCAATGCAAGAGATTGTGGCTCCACCCATTTTTCCTTCCAGAATAACGTCTTCTTTCCCATTTCTAACTGTAAATGAGGAACATCTATCAAATAATGATCCAAGCATTGAAATAGTTTTCCTCTGGCTAGGCAAGCTTACTGATTTTCTTCCTTTACAGCAACGAGGATTCTGTGTATTGAATTTTCTTGATTGAGATAGAAGGTAGAAAATTCTCTATGAGACTTGTGTGCTTTATCTCACTGATATCTTCATATATTTTTGCTTCACCCTCAAGTCATAGTGGAGGAGGAGTATTGCGCCTTAATGAACACTGGTAAGCTGGTAACGGGTGCTCCATCAGTTTCCTAGAAAGGGGTGAATTAGTTGTCCTTATATAGTACTTTTATTGCACTAAATTACTGATCATTATTTGCTGGCTGCCAGCGAATTTGTTGTCATAGCCAGGAATATAACAGTCACTCAATGAGCTTTCATTTCCTTCATATCTCTAACCCCATAAACTAATCCCACAACAAGAATTTTTAATTTTTCACTCGATGAACTGAACAACCCACCTTGACTTGCCCACAAATAATTGGAGACTTCACTTTGATCACTGCAGGGTGGACATATAATTTTCTTCCAGAGCTTGAGTCTCTTGGGATATTGCCTATTCCCTCTAGATATTGGAGCATTGATCTGCATGTTGAAGGACAATGTAGTAGTGAAGATAGTTGTAGTGTGTGTGACCTTGGCATGGAGTTCATGGGCTGCATATCCTTTCATGAGTGCAGCAGTAAACCCAAGAAGAAAAGCCCTTGCCCTCTACCCCGTGTTCCTCATGTATGTATCAGTTGGTTTCCTCATCATTGCCATTGATTGAGACCAGTATTCTTCAACAAATTAGGAATGTTACTTTTAACCTCTTTTTGTTTTTGTTGTTGACTTATATGATGTCTTGAAACTCGGATCTCCCTGGATGGATCATCACATTCAGTGACAGCAAATTTTGCTTGCTGGAAACCCAAATCTGTGTAGCTTCATGTATCTACTTGTTGTTCATTCATTCACTCACATTATTCTTCCACTCTCCATCTCTCTAACATGCATGAAATTGTATTCTCTCTCACACATGCACCACTCCACTCATTCCCATTTTCCTCTCTGATTTGTTGT

mRNA sequence

GGAAAATGTCTCACAGCGATACAATTCCTCTTCACCAATCCTCTCAGTCGGACATCGACGAGATCGAGAATCTCATCAACGCCAGCGTCCAAACCAGCTCCTCCACTGTTCTTCCAGCTCGTCCCCCAAGTCCTCCTAGGGCTTCTATTCCTGTTTCTTCCTCACCGTTTATACAGTCCAATCTCCCTCCACTTCCCCCCAAATCAACTAGCCAGAAGCCGCCGACTGTCTTCCCTGCTCCGCCGCCGCTGCCTGCCTCCAGTAATGCCCGGTCTGATACATCGCCGACTGGATTCGGATCGGGGCCCAACACACTGACGGAGCCGGTATGGGATACGGTCAAGCGGGATCTGTCCCGGATCGTCAACAATTTGAAGCTTGTGGTTTTTCCCAACCCTTTCCGTGAGGACCCCGGAAAGGCTTTGAGGGATTGGGATCTGTGGGGGCCTTTCTTCTTCATTGTGTTCCTCGGTCTTACTCTTTCGTGGTCTGCATCGGTCAAGAAGTCTGAGGTGTTTGCTGTTGCATTTGCACTTCTTGCTGCCGGTGCAGTGATTCTGACCTTGAATGTGCTTCTCCTGGGTGGACATATAATTTTCTTCCAGAGCTTGAGTCTCTTGGGATATTGCCTATTCCCTCTAGATATTGGAGCATTGATCTGCATGTTGAAGGACAATGTAGTAGTGAAGATAGTTGTAGTGTGTGTGACCTTGGCATGGAGTTCATGGGCTGCATATCCTTTCATGAGTGCAGCAGTAAACCCAAGAAGAAAAGCCCTTGCCCTCTACCCCGTGTTCCTCATGTATGTATCAGTTGGTTTCCTCATCATTGCCATTGATTGAGACCAGTATTCTTCAACAAATTAGGAATGTTACTTTTAACCTCTTTTTGTTTTTGTTGTTGACTTATATGATGTCTTGAAACTCGGATCTCCCTGGATGGATCATCACATTCAGTGACAGCAAATTTTGCTTGCTGGAAACCCAAATCTGTGTAGCTTCATGTATCTACTTGTTGTTCATTCATTCACTCACATTATTCTTCCACTCTCCATCTCTCTAACATGCATGAAATTGTATTCTCTCTCACACATGCACCACTCCACTCATTCCCATTTTCCTCTCTGATTTGTTGT

Coding sequence (CDS)

ATGTCTCACAGCGATACAATTCCTCTTCACCAATCCTCTCAGTCGGACATCGACGAGATCGAGAATCTCATCAACGCCAGCGTCCAAACCAGCTCCTCCACTGTTCTTCCAGCTCGTCCCCCAAGTCCTCCTAGGGCTTCTATTCCTGTTTCTTCCTCACCGTTTATACAGTCCAATCTCCCTCCACTTCCCCCCAAATCAACTAGCCAGAAGCCGCCGACTGTCTTCCCTGCTCCGCCGCCGCTGCCTGCCTCCAGTAATGCCCGGTCTGATACATCGCCGACTGGATTCGGATCGGGGCCCAACACACTGACGGAGCCGGTATGGGATACGGTCAAGCGGGATCTGTCCCGGATCGTCAACAATTTGAAGCTTGTGGTTTTTCCCAACCCTTTCCGTGAGGACCCCGGAAAGGCTTTGAGGGATTGGGATCTGTGGGGGCCTTTCTTCTTCATTGTGTTCCTCGGTCTTACTCTTTCGTGGTCTGCATCGGTCAAGAAGTCTGAGGTGTTTGCTGTTGCATTTGCACTTCTTGCTGCCGGTGCAGTGATTCTGACCTTGAATGTGCTTCTCCTGGGTGGACATATAATTTTCTTCCAGAGCTTGAGTCTCTTGGGATATTGCCTATTCCCTCTAGATATTGGAGCATTGATCTGCATGTTGAAGGACAATGTAGTAGTGAAGATAGTTGTAGTGTGTGTGACCTTGGCATGGAGTTCATGGGCTGCATATCCTTTCATGAGTGCAGCAGTAAACCCAAGAAGAAAAGCCCTTGCCCTCTACCCCGTGTTCCTCATGTATGTATCAGTTGGTTTCCTCATCATTGCCATTGATTGA

Protein sequence

MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNLPPLPPKSTSQKPPTVFPAPPPLPASSNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID

Homology

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BLAST of Carg08435 vs. NCBI nr
Match: XP_022957783.1 (protein YIPF6 homolog [Cucurbita moschata])

HSP 1 Score: 501.9 bits (1291), Expect = 1.4e-138
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120

Query: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180
           NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA
Sbjct: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

Query: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240
           GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS
Sbjct: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240

Query: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Carg08435 vs. NCBI nr
Match: XP_022995736.1 (protein YIPF6 homolog [Cucurbita maxima])

HSP 1 Score: 499.2 bits (1284), Expect = 9.0e-138
Identity = 263/278 (94.60%), Postives = 264/278 (94.96%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKST+QKPP             N RSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTNQKPPTVFPAPPPLPVSSNGRSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120

Query: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180
           NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA
Sbjct: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

Query: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240
           GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS
Sbjct: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240

Query: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Carg08435 vs. NCBI nr
Match: XP_023533751.1 (protein YIPF6 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499.2 bits (1284), Expect = 9.0e-138
Identity = 263/278 (94.60%), Postives = 264/278 (94.96%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKST+QKPP             N RSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTNQKPPTVFPAPPPLPASTNGRSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120

Query: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180
           NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA
Sbjct: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

Query: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240
           GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS
Sbjct: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240

Query: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Carg08435 vs. NCBI nr
Match: XP_008467227.1 (PREDICTED: protein YIPF6 homolog [Cucumis melo])

HSP 1 Score: 479.6 bits (1233), Expect = 7.4e-132
Identity = 252/278 (90.65%), Postives = 258/278 (92.81%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQT  STVLPARPPSPPRASIPVSSSPF+QSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKST+QKPP             N R D S +GFGS PNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTNQKPPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLSRIV 120

Query: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180
           +NLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

Query: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240
           GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV+VKIVVVCVTLAWSS
Sbjct: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLAWSS 240

Query: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           WAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 WAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Carg08435 vs. NCBI nr
Match: XP_022159810.1 (protein YIPF6 homolog [Momordica charantia])

HSP 1 Score: 479.2 bits (1232), Expect = 9.7e-132
Identity = 251/278 (90.29%), Postives = 257/278 (92.45%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQ+  STVLPARPPSPPRASIPVSSSPFIQSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQSGPSTVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKST QKPP             N R D S TGFGS PNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTIQKPPTVSPAPPPLPVSGNGRPDISSTGFGSAPNTLTEPVWDTVKRDLSRIV 120

Query: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180
           +NLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

Query: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240
           GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GALICMLKDNV+VKI+VVCVTLAWSS
Sbjct: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIVKIIVVCVTLAWSS 240

Query: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           WAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 WAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Carg08435 vs. TAIR10
Match: AT2G18840.1 (Integral membrane Yip1 family protein)

HSP 1 Score: 416.4 bits (1069), Expect = 1.4e-116
Identity = 226/282 (80.14%), Postives = 243/282 (86.17%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPV----SSSPFI 60
           MS  DT+PLH SSQSDIDEIENLIN SVQ+   TVL ARPPSP R SIPV    SSSPF+
Sbjct: 1   MSQGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFM 60

Query: 61  QSNLPPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDL 120
           QSNLPPL P S++QK               N+ +    + FGS PNTLTEPVWDTVKRDL
Sbjct: 61  QSNLPPLHPSSSAQK-VTHVPVPPPLPAVSNSSNFQGASAFGSPPNTLTEPVWDTVKRDL 120

Query: 121 SRIVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFA 180
           SRIV+NLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFA
Sbjct: 121 SRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFA 180

Query: 181 LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTL 240
           LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GA+ICMLKDNV++K+VVV VTL
Sbjct: 181 LLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSVTL 240

Query: 241 AWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           AWSSWAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAI+
Sbjct: 241 AWSSWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAIN 281

[Close]

BLAST of Carg08435 vs. TAIR10
Match: AT4G30260.1 (Integral membrane Yip1 family protein)

HSP 1 Score: 412.9 bits (1060), Expect = 1.5e-115
Identity = 236/280 (84.29%), Postives = 252/280 (90.00%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSH+DTIPL+QSSQSDIDEIEN++N S Q+   TVLPARPPSP R SIPVSSSPF+QSNL
Sbjct: 1   MSHNDTIPLYQSSQSDIDEIENMMNDSFQSGPGTVLPARPPSPIRPSIPVSSSPFVQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTS--PTGFGSGPNTLTEPVWDTVKRDLSR 120
           PP           XXXXXXXXXXXXX    + S   +GFGS PNTLTEPVWDTVKRDLSR
Sbjct: 61  PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKSIGGSGFGSPPNTLTEPVWDTVKRDLSR 120

Query: 121 IVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALL 180
           IV+NLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALL
Sbjct: 121 IVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALL 180

Query: 181 AAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAW 240
           AAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GA+ICMLKDNV++K+VVV VTLAW
Sbjct: 181 AAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSVTLAW 240

Query: 241 SSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           SSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAI+
Sbjct: 241 SSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAIN 280

[Close]

BLAST of Carg08435 vs. Swiss-Prot
Match: sp|Q54RZ2|YIPF6_DICDI (Protein YIPF6 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf6 PE=3 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 8.0e-29
Identity = 74/177 (41.81%), Postives = 109/177 (61.58%), Query Frame = 0


Query: 101 PNTLTEPVWDTVKRDLSRIVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLS 160
           PNTL EPV  T+ RDL  I   L  V+ P   R +    LRDWDLWGP    + + + LS
Sbjct: 7   PNTLDEPVIQTILRDLKMIGFKLYHVILP---RGNAANVLRDWDLWGPLILCLVMAIFLS 66

Query: 161 WSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICM 220
            SA  +K+  F + F ++  GA I+T+N  LL G+I FFQS+ +LGYC+FPL I  +I  
Sbjct: 67  ISAEEQKALEFTIVFVVVWCGAAIVTVNGQLLCGNISFFQSVCILGYCIFPLTIATIIIW 126

Query: 221 LKDN--VVVKIVVVCVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLII 276
           +  N  ++VK+ +V     WSS+A+Y F+ ++V   R+ LA+YPV L Y+ + +L++
Sbjct: 127 IIQNFTMIVKLPIVGGAWFWSSFASYGFLGSSVPESRRLLAVYPVLLFYLVIAWLVV 180

[Close]

BLAST of Carg08435 vs. Swiss-Prot
Match: sp|Q28CH8|YIPF6_XENTR (Protein YIPF6 OS=Xenopus tropicalis OX=8364 GN=yipf6 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-28
Identity = 75/187 (40.11%), Postives = 110/187 (58.82%), Query Frame = 0


Query: 102 NTLTEPVWDTVKRDLSRIVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSW 161
           +TL EPV DT+ RDL  + N    V++P    +     LRDWDLWGP    V L L L  
Sbjct: 48  STLDEPVKDTIMRDLKAVGNKFLHVMYP----KKSTTLLRDWDLWGPLVLCVSLALMLQG 107

Query: 162 SASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALI 221
             +  K +    FA  F ++  GAV++TLN  LLGG I FFQSL +LGYC+ PL +  L+
Sbjct: 108 GNADSKDDGGPQFAEVFVIIWFGAVVITLNSKLLGGTISFFQSLCVLGYCILPLTVAMLV 167

Query: 222 CML-------KDNVVVKIVVVCVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVG 279
           C L         + +V++VVV V  AWS++A+  F++ +  P R+ALA+YP+FL Y  + 
Sbjct: 168 CRLVLLLSHTTASFIVRLVVVTVMFAWSTFASTAFLADSQPPNRRALAVYPIFLFYFVIS 227

[Close]

BLAST of Carg08435 vs. Swiss-Prot
Match: sp|Q4QQU5|YIPF6_RAT (Protein YIPF6 OS=Rattus norvegicus OX=10116 GN=Yipf6 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.3e-26
Identity = 78/185 (42.16%), Postives = 103/185 (55.68%), Query Frame = 0


Query: 102 NTLTEPVWDTVKRDLSRIVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSW 161
           +TL E +  T+ RDL  +      V++P          LRDWDLWGP    V L L L  
Sbjct: 52  STLNESIRRTIMRDLKAVGRKFMHVLYP----RKSNTLLRDWDLWGPLILCVSLALMLQK 111

Query: 162 SASVKK----SEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGAL 221
           S+   K    S  FA  F ++  GAV +TLN  LLGG+I FFQSL +LGYC+ PL+I  L
Sbjct: 112 SSVEGKRDGGSPEFAEVFVIIWFGAVTITLNSKLLGGNISFFQSLCVLGYCVLPLNIAML 171

Query: 222 ICML-------KDNVVVKIVVVCVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSV 276
           IC L         N ++++ VV V  AWS  A+  F++    P RKALA+YPVFL Y  V
Sbjct: 172 ICRLLLLAGQGPINFMIRLFVVLVMFAWSVIASTAFLADCQPPNRKALAVYPVFLFYFVV 231

[Close]

BLAST of Carg08435 vs. Swiss-Prot
Match: sp|Q6IQ85|YIPF6_DANRE (Protein YIPF6 OS=Danio rerio OX=7955 GN=yipf6 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-25
Identity = 70/184 (38.04%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 102 NTLTEPVWDTVKRDLSRIVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSW 161
           +TL EPV DT+ RDL  +      V++P    +     LRDWDLWGP    V L L L  
Sbjct: 55  STLDEPVKDTILRDLRAVGQKFVHVMYP----KKSSALLRDWDLWGPLLLCVTLALMLQG 114

Query: 162 SASVKKSE---VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALI 221
            ++  + +    FA  F ++  G+VI+TLN  LLGG I FFQSL +LGYC+ PL +  ++
Sbjct: 115 GSADSEEDGRPQFAEVFVIIWFGSVIITLNSKLLGGTISFFQSLCVLGYCILPLTVAMIV 174

Query: 222 CML-------KDNVVVKIVVVCVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSVG 276
           C +         +  V+++VV  + +WS++A+  F++ +    RKAL +YPVFL Y  +G
Sbjct: 175 CRIVLLGGSGVVSFAVRLIVVTASFSWSTFASTAFLADSQPTNRKALVVYPVFLFYFVIG 234

[Close]

BLAST of Carg08435 vs. Swiss-Prot
Match: sp|Q8BR70|YIPF6_MOUSE (Protein YIPF6 OS=Mus musculus OX=10090 GN=Yipf6 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-25
Identity = 75/185 (40.54%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 102 NTLTEPVWDTVKRDLSRIVNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSW 161
           +TL E +  T+ RDL  +      V++P          LRDWDLWGP    V L L L  
Sbjct: 52  STLNESIRRTIMRDLKAVGRKFMHVLYP----RKSNALLRDWDLWGPLILCVTLALMLQK 111

Query: 162 SASVKKSE----VFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGAL 221
           S+   K++     FA  F ++  GAV +TLN  LLGG+I FFQSL +LGYC+ PL+I  L
Sbjct: 112 SSIDGKNDGGGPEFAEVFVIIWFGAVTITLNSKLLGGNISFFQSLCVLGYCILPLNIAML 171

Query: 222 ICML-------KDNVVVKIVVVCVTLAWSSWAAYPFMSAAVNPRRKALALYPVFLMYVSV 276
           IC L         N ++++ VV +  AWS  A+  F++ +  P RKALA+YPVFL Y  +
Sbjct: 172 ICRLLLLAGQGPINFMIRLFVVLLMFAWSVVASTAFLADSQPPNRKALAVYPVFLFYFVI 231

[Close]

BLAST of Carg08435 vs. TrEMBL
Match: tr|A0A1S3CT87|A0A1S3CT87_CUCME (Protein YIPF OS=Cucumis melo OX=3656 GN=LOC103504629 PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 4.9e-132
Identity = 252/278 (90.65%), Postives = 258/278 (92.81%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQT  STVLPARPPSPPRASIPVSSSPF+QSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKST+QKPP             N R D S +GFGS PNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTNQKPPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLSRIV 120

Query: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180
           +NLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

Query: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240
           GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNV+VKIVVVCVTLAWSS
Sbjct: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVIVKIVVVCVTLAWSS 240

Query: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           WAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 WAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Carg08435 vs. TrEMBL
Match: tr|A0A0A0KL60|A0A0A0KL60_CUCSA (Protein YIPF OS=Cucumis sativus OX=3659 GN=Csa_5G173430 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 8.4e-132
Identity = 253/278 (91.01%), Postives = 257/278 (92.45%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSHSDTIPLHQSSQSDIDEIENLINASVQT  STVLPARPPSPPRASIPVSSSPF+QSNL
Sbjct: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTGPSTVLPARPPSPPRASIPVSSSPFLQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120
           PPLPPKST QKPP             N R D S +GFGS PNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPLPPKSTIQKPPTVFPTPPPLPVSGNGRPDLSASGFGSPPNTLTEPVWDTVKRDLSRIV 120

Query: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180
           +NLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

Query: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240
           GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS
Sbjct: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240

Query: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           WAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 WAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 278

[Close]

BLAST of Carg08435 vs. TrEMBL
Match: tr|A0A2P5C734|A0A2P5C734_PARAD (Protein YIPF OS=Parasponia andersonii OX=3476 GN=PanWU01x14_178240 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.1e-123
Identity = 242/278 (87.05%), Postives = 255/278 (91.73%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSHSDT+PLH SSQSDIDEIENLINASVQ+  +TVLPARPPSPPRASIPVSSSPFIQSNL
Sbjct: 1   MSHSDTVPLHPSSQSDIDEIENLINASVQSGPATVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120
           PP      +Q+PP     XXXXX   N     + TGFGSGPNTLTEPVWDTVKRDLSRIV
Sbjct: 61  PPXXXXXANQEPP-TVLVXXXXXPSGNGNPSIASTGFGSGPNTLTEPVWDTVKRDLSRIV 120

Query: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180
           +NLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

Query: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240
           GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GALICMLKDNV+VK++VVCVTLAWSS
Sbjct: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIVKVIVVCVTLAWSS 240

Query: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           WAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 WAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 277

[Close]

BLAST of Carg08435 vs. TrEMBL
Match: tr|A0A2P5FJE6|A0A2P5FJE6_9ROSA (Protein YIPF OS=Trema orientalis OX=63057 GN=TorRG33x02_062350 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 8.1e-119
Identity = 245/278 (88.13%), Postives = 256/278 (92.09%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSHSDT+PLH SSQSDIDEIENLINASVQ+  +TVLPARPPSPPRASIPVSSSPFIQSNL
Sbjct: 1   MSHSDTVPLHPSSQSDIDEIENLINASVQSGPATVLPARPPSPPRASIPVSSSPFIQSNL 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTSPTGFGSGPNTLTEPVWDTVKRDLSRIV 120
           P            XXXXXXXXXXXXX      + TGFGSGPNTLTEPVWDTVKRDLSRIV
Sbjct: 61  P--XXXXXXXXXXXXXXXXXXXXXXXXXXXSIASTGFGSGPNTLTEPVWDTVKRDLSRIV 120

Query: 121 NNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180
           +NLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA
Sbjct: 121 SNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAA 180

Query: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWSS 240
           GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLD+GALICMLKDNV+VK++VVCVTLAWSS
Sbjct: 181 GAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGALICMLKDNVIVKVIVVCVTLAWSS 240

Query: 241 WAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           WAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 WAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 276

[Close]

BLAST of Carg08435 vs. TrEMBL
Match: tr|A0A1U8ACF1|A0A1U8ACF1_NELNU (Protein YIPF OS=Nelumbo nucifera OX=4432 GN=LOC104599137 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.4e-118
Identity = 232/279 (83.15%), Postives = 247/279 (88.53%), Query Frame = 0


Query: 1   MSHSDTIPLHQSSQSDIDEIENLINASVQTSSSTVLPARPPSPPRASIPVSSSPFIQSNL 60
           MSH+DT+PLH SSQSDIDEIENLINASVQ+  +TVLPARPPSPPRASIPVSSSPFI SN+
Sbjct: 1   MSHNDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPARPPSPPRASIPVSSSPFITSNI 60

Query: 61  PPLPPKSTSQKPPXXXXXXXXXXXXXNARSDTS-PTGFGSGPNTLTEPVWDTVKRDLSRI 120
            P     T QKPP             ++ S  S   GFGS PNTLTEPVWDTVKRDLSRI
Sbjct: 61  QP-----TYQKPPAAPIPVPPALPTSDSSSRASISNGFGSLPNTLTEPVWDTVKRDLSRI 120

Query: 121 VNNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLA 180
           V+NLKLVVFPNP+REDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLA
Sbjct: 121 VSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLA 180

Query: 181 AGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDIGALICMLKDNVVVKIVVVCVTLAWS 240
           AGA+ILTLNVLLLGG IIFFQSLSLLGYCLFPLDIGALICMLKDNV++K++VVCVTLAWS
Sbjct: 181 AGAIILTLNVLLLGGQIIFFQSLSLLGYCLFPLDIGALICMLKDNVIIKVIVVCVTLAWS 240

Query: 241 SWAAYPFMSAAVNPRRKALALYPVFLMYVSVGFLIIAID 279
           SWAAYPFMS+AVNPRRKALALYPVFLMYVSVGFLIIAID
Sbjct: 241 SWAAYPFMSSAVNPRRKALALYPVFLMYVSVGFLIIAID 274

The following BLAST results are available for this feature:

BLAST of Carg08435 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957783.1	1.4e-138	100.00	protein YIPF6 homolog [Cucurbita moschata]	[more]
XP_022995736.1	9.0e-138	94.60	protein YIPF6 homolog [Cucurbita maxima]	[more]
XP_023533751.1	9.0e-138	94.60	protein YIPF6 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_008467227.1	7.4e-132	90.65	PREDICTED: protein YIPF6 homolog [Cucumis melo]	[more]
XP_022159810.1	9.7e-132	90.29	protein YIPF6 homolog [Momordica charantia]	[more]

BLAST of Carg08435 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18840.1	1.4e-116	80.14	Integral membrane Yip1 family protein	[more]
AT4G30260.1	1.5e-115	84.29	Integral membrane Yip1 family protein	[more]

BLAST of Carg08435 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q54RZ2\|YIPF6_DICDI	8.0e-29	41.81	Protein YIPF6 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf6 PE=3 SV=2	[more]
sp\|Q28CH8\|YIPF6_XENTR	1.8e-28	40.11	Protein YIPF6 OS=Xenopus tropicalis OX=8364 GN=yipf6 PE=2 SV=1	[more]
sp\|Q4QQU5\|YIPF6_RAT	8.3e-26	42.16	Protein YIPF6 OS=Rattus norvegicus OX=10116 GN=Yipf6 PE=1 SV=1	[more]
sp\|Q6IQ85\|YIPF6_DANRE	1.9e-25	38.04	Protein YIPF6 OS=Danio rerio OX=7955 GN=yipf6 PE=2 SV=1	[more]
sp\|Q8BR70\|YIPF6_MOUSE	1.9e-25	40.54	Protein YIPF6 OS=Mus musculus OX=10090 GN=Yipf6 PE=1 SV=1	[more]

BLAST of Carg08435 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CT87\|A0A1S3CT87_CUCME	4.9e-132	90.65	Protein YIPF OS=Cucumis melo OX=3656 GN=LOC103504629 PE=3 SV=1	[more]
tr\|A0A0A0KL60\|A0A0A0KL60_CUCSA	8.4e-132	91.01	Protein YIPF OS=Cucumis sativus OX=3659 GN=Csa_5G173430 PE=3 SV=1	[more]
tr\|A0A2P5C734\|A0A2P5C734_PARAD	1.1e-123	87.05	Protein YIPF OS=Parasponia andersonii OX=3476 GN=PanWU01x14_178240 PE=3 SV=1	[more]
tr\|A0A2P5FJE6\|A0A2P5FJE6_9ROSA	8.1e-119	88.13	Protein YIPF OS=Trema orientalis OX=63057 GN=TorRG33x02_062350 PE=3 SV=1	[more]
tr\|A0A1U8ACF1\|A0A1U8ACF1_NELNU	1.4e-118	83.15	Protein YIPF OS=Nelumbo nucifera OX=4432 GN=LOC104599137 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR006977	Yip1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08435-RA	Carg08435-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006977	Yip1 domain	PFAM	PF04893	Yip1	coord: 132..259 e-value: 3.6E-13 score: 49.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..104
None	No IPR available	PANTHER	PTHR21236:SF16	SUBFAMILY NOT NAMED	coord: 1..278
None	No IPR available	PANTHER	PTHR21236	GOLGI MEMBRANE PROTEIN YIP1	coord: 1..278

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08435	Cla002341	Watermelon (97103) v1	carwmB0712
Carg08435	Csa5G173430	Cucumber (Chinese Long) v2	carcuB0733
Carg08435	MELO3C005378	Melon (DHL92) v3.5.1	carmeB0705
Carg08435	ClCG01G005520	Watermelon (Charleston Gray)	carwcgB0688
Carg08435	CSPI05G08360	Wild cucumber (PI 183967)	carcpiB0749
Carg08435	Cucsa.166470	Cucumber (Gy14) v1	carcgyB0797
Carg08435	CmaCh02G010420	Cucurbita maxima (Rimu)	carcmaB0999
Carg08435	CmaCh15G014070	Cucurbita maxima (Rimu)	carcmaB0993
Carg08435	CmoCh15G014780	Cucurbita moschata (Rifu)	carcmoB0965
Carg08435	CmoCh02G010560	Cucurbita moschata (Rifu)	carcmoB0971
Carg08435	Lsi09G005850	Bottle gourd (USVL1VR-Ls)	carlsiB648
Carg08435	Cp4.1LG05g06770	Cucurbita pepo (Zucchini)	carcpeB1002
Carg08435	Cp4.1LG13g00410	Cucurbita pepo (Zucchini)	carcpeB0995
Carg08435	MELO3C005378.2	Melon (DHL92) v3.6.1	carmedB0718
Carg08435	CsaV3_5G005750	Cucumber (Chinese Long) v3	carcucB0752
Carg08435	Cla97C01G005760	Watermelon (97103) v2	carwmbB0741
Carg08435	Bhi12G000487	Wax gourd	carwgoB0831

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08435	Carg20773	Silver-seed gourd	carcarB584

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08435	Cucumber (Gy14) v2	carcgybB0707
Carg08435	Cucumber (Gy14) v2	carcgybB0711
Carg08435	Cucurbita maxima (Rimu)	carcmaB0994
Carg08435	Cucurbita maxima (Rimu)	carcmaB0996
Carg08435	Cucurbita moschata (Rifu)	carcmoB0966
Carg08435	Cucurbita moschata (Rifu)	carcmoB0968
Carg08435	Cucurbita pepo (Zucchini)	carcpeB0994
Carg08435	Cucurbita pepo (Zucchini)	carcpeB0998
Carg08435	Wild cucumber (PI 183967)	carcpiB0745
Carg08435	Cucumber (Chinese Long) v2	carcuB0730
Carg08435	Cucumber (Chinese Long) v3	carcucB0748
Carg08435	Melon (DHL92) v3.5.1	carmeB0709
Carg08435	Melon (DHL92) v3.6.1	carmedB0722
Carg08435	Watermelon (Charleston Gray)	carwcgB0690
Carg08435	Watermelon (97103) v1	carwmB0710
Carg08435	Watermelon (97103) v1	carwmB0708
Carg08435	Watermelon (97103) v2	carwmbB0743
Carg08435	Wax gourd	carwgoB0836