Cla97C01G004060 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G004060
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	14 kDa proline-rich protein DC2.15-like
Location	Cla97Chr01 : 4003276 .. 4003542 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAAAAGCTACTGTCACCTCTCTCGCATTCCTCCTCGCTCTCATTCTCTTCTCATTATCCTCCTTCGTTTCCTCTTGCATCGACGACTGCTACATTCCGTCCAATGCTACACCTACACCTTCACCTTTACCTTCTACCGAGGAGGGAAAAAGATGCCCAAGAGACACTCTTAAATTCCGTATTTGCTCGAAATTGCTCGACGCTCGCACCGACGTTACCAGTGACAAGCGACCGGGGCACTCTAATGGAAGGGCTCATTGA

mRNA sequence

ATGGCTTCAAAAGCTACTGTCACCTCTCTCGCATTCCTCCTCGCTCTCATTCTCTTCTCATTATCCTCCTTCGTTTCCTCTTGCATCGACGACTGCTACATTCCGTCCAATGCTACACCTACACCTTCACCTTTACCTTCTACCGAGGAGGGAAAAAGATGCCCAAGAGACACTCTTAAATTCCGTATTTGCTCGAAATTGCTCGACGCTCGCACCGACGTTACCAGTGACAAGCGACCGGGGCACTCTAATGGAAGGGCTCATTGA

Coding sequence (CDS)

ATGGCTTCAAAAGCTACTGTCACCTCTCTCGCATTCCTCCTCGCTCTCATTCTCTTCTCATTATCCTCCTTCGTTTCCTCTTGCATCGACGACTGCTACATTCCGTCCAATGCTACACCTACACCTTCACCTTTACCTTCTACCGAGGAGGGAAAAAGATGCCCAAGAGACACTCTTAAATTCCGTATTTGCTCGAAATTGCTCGACGCTCGCACCGACGTTACCAGTGACAAGCGACCGGGGCACTCTAATGGAAGGGCTCATTGA

Protein sequence

MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLKFRICSKLLDARTDVTSDKRPGHSNGRAH

Homology

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: XP_022154816.1 (14 kDa proline-rich protein DC2.15-like [Momordica charantia])

HSP 1 Score: 67.0 bits (162), Expect = 3.6e-08
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASKA + SLAFLL+L L  L S +++C +DCY PS+  PTPSP    E+GK+CP++TLK
Sbjct: 1  MASKA-IASLAFLLSLNL--LLSLIAAC-NDCYAPSHPHPTPSP----EQGKKCPKNTLK 60

Query: 61 FRICSKLLDARTDVTSDKRP 81
            +C+KLL    DVT    P
Sbjct: 61 LGVCAKLLGGLVDVTIGHPP 72

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: XP_022154817.1 (14 kDa proline-rich protein DC2.15-like [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-07
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASKAT  SLAFLL+L L  L S V++C +DCY PS+  PTPSP    E+GK+CP++TLK
Sbjct: 1  MASKAT-ASLAFLLSLNL--LLSLVTAC-NDCYAPSHPHPTPSP----EQGKKCPKNTLK 60

Query: 61 FRICSKLLDARTDVTSDKRP 81
            +C+KLL    +V+    P
Sbjct: 61 LGVCAKLLGGLVNVSIGHPP 72

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: XP_022969913.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita maxima])

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-07
Identity = 46/84 (54.76%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPR 60
          MASKAT  SLAFLL+L L    S VS+C  DCY+PS   P P     P PS+  GK CPR
Sbjct: 1  MASKAT-ASLAFLLSLNLL-FFSLVSAC-SDCYVPSPPMPNPCPPTVPTPSSGHGK-CPR 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          DTLK  +C+KLL    DVT  K P
Sbjct: 61 DTLKLGVCAKLLRGLVDVTIGKPP 80

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: XP_022969923.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita maxima])

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-07
Identity = 46/84 (54.76%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPS----PLPSTEEGKRCPR 60
          MASKAT  SLAFLL+L L    S VS+C  DCY+PS   P P     P PS+  GK CPR
Sbjct: 1  MASKAT-PSLAFLLSLNLL-FFSLVSAC-SDCYVPSPPMPNPCPPTVPTPSSGHGK-CPR 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          DTLK  +C+KLL    DVT  K P
Sbjct: 61 DTLKLGVCAKLLRGLVDVTIGKPP 80

[Close]

BLAST of Cla97C01G004060 vs. NCBI nr
Match: XP_023551384.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-07
Identity = 46/84 (54.76%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTP----SPLPSTEEGKRCPR 60
          MASKAT  SLAFLL+L L    S VS+C  DCY+PS   P P     P P +  GK CPR
Sbjct: 1  MASKAT-PSLAFLLSLNLL-FFSLVSAC-SDCYVPSPPIPNPCPPTMPNPPSAHGK-CPR 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          DTLKF +C+KLL    DVT  K P
Sbjct: 61 DTLKFGVCAKLLGGLLDVTIGKPP 80

[Close]

BLAST of Cla97C01G004060 vs. TrEMBL
Match: tr|A0A0A0KKK9|A0A0A0KKK9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161300 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-07
Identity = 44/80 (55.00%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          M SKAT  SLAFLLALIL S S+FVS     CY  SN  PT    PST+  K+CP++TL 
Sbjct: 1  MVSKAT-ASLAFLLALILLS-STFVS-----CYDTSNLRPT---TPSTKARKKCPKNTLN 60

Query: 61 FRICSKLLDARTDVTSDKRP 81
          F ICSKLL+  T+   +K P
Sbjct: 61 FEICSKLLNGETNADIEKCP 70

[Close]

BLAST of Cla97C01G004060 vs. TrEMBL
Match: tr|A0A0A0KKU4|A0A0A0KKU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161870 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.7e-07
Identity = 42/80 (52.50%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTPSPLPSTEEGKRCPRDTLK 60
          MASKAT  SLAFLL+L L    + VSSC D+CY+P  A P P P P ++ GK CP+D LK
Sbjct: 1  MASKAT-ASLAFLLSLNLL-FFTLVSSC-DNCYVP--APPKPEPYPPSDYGK-CPKDALK 60

Query: 61 FRICSKLLDARTDVTSDKRP 81
            +C+KLL    D+T  K P
Sbjct: 61 IGVCAKLLGGLVDLTIGKPP 74

[Close]

BLAST of Cla97C01G004060 vs. TrEMBL
Match: tr|A0A1S3ATS5|A0A1S3ATS5_CUCME (14 kDa proline-rich protein DC2.15-like OS=Cucumis melo OX=3656 GN=LOC103482621 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-06
Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTP----SPLPSTEEGKRCPR 60
          MASKAT  SLAFLL+L L    +FVS+C D+CY+P+   P P     P P +  GK CP+
Sbjct: 1  MASKAT-ASLAFLLSLNLL-FFTFVSAC-DNCYVPAPPKPKPCXPTKPNPPSNYGK-CPK 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          DTLK  +C+KLL    D+T  K P
Sbjct: 61 DTLKIGVCAKLLGGLVDLTIGKPP 80

[Close]

BLAST of Cla97C01G004060 vs. TrEMBL
Match: tr|A0A0A0KKL9|A0A0A0KKL9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161890 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.5e-06
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTP----SPLPSTEEGKRCPR 60
          MASKA+  SLAFLL+L L    +FVS+C D+CY+P+   P P     P P +  GK CP+
Sbjct: 1  MASKAS-ASLAFLLSLNLL-FFTFVSAC-DNCYVPAPPKPKPCXXTKPNPPSNYGK-CPK 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          DTLK  +C+KLL    D+T  K P
Sbjct: 61 DTLKIGVCAKLLGGLVDLTIGKPP 80

[Close]

BLAST of Cla97C01G004060 vs. TrEMBL
Match: tr|A0A0A0KP86|A0A0A0KP86_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161860 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.5e-06
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 1  MASKATVTSLAFLLALILFSLSSFVSSCIDDCYIPSNATPTP----SPLPSTEEGKRCPR 60
          MASKAT  SLAFLL+L L    +FVS+C D+CY+P+   P P     P P +  GK CP+
Sbjct: 1  MASKAT-ASLAFLLSLNLL-FFTFVSAC-DNCYVPAPPKPKPCXPTKPNPPSNYGK-CPK 60

Query: 61 DTLKFRICSKLLDARTDVTSDKRP 81
          D LK  +C+KLL    D+T  K P
Sbjct: 61 DALKIGVCAKLLGGLVDLTIGKPP 80

The following BLAST results are available for this feature:

BLAST of Cla97C01G004060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154816.1	3.6e-08	52.50	14 kDa proline-rich protein DC2.15-like [Momordica charantia]	[more]
XP_022154817.1	1.8e-07	52.50	14 kDa proline-rich protein DC2.15-like [Momordica charantia]	[more]
XP_022969913.1	1.8e-07	54.76	14 kDa proline-rich protein DC2.15-like [Cucurbita maxima]	[more]
XP_022969923.1	2.3e-07	54.76	14 kDa proline-rich protein DC2.15-like [Cucurbita maxima]	[more]
XP_023551384.1	2.3e-07	54.76	14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C01G004060 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KKK9\|A0A0A0KKK9_CUCSA	3.5e-07	55.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161300 PE=4 SV=1	[more]
tr\|A0A0A0KKU4\|A0A0A0KKU4_CUCSA	7.7e-07	52.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161870 PE=4 SV=1	[more]
tr\|A0A1S3ATS5\|A0A1S3ATS5_CUCME	2.2e-06	50.00	14 kDa proline-rich protein DC2.15-like OS=Cucumis melo OX=3656 GN=LOC103482621 ...	[more]
tr\|A0A0A0KKL9\|A0A0A0KKL9_CUCSA	6.5e-06	48.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161890 PE=4 SV=1	[more]
tr\|A0A0A0KP86\|A0A0A0KP86_CUCSA	8.5e-06	48.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161860 PE=4 SV=1	[more]

BLAST of Cla97C01G004060 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C01G004060 vs. TAIR10


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G004060.1	Cla97C01G004060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..28 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G004060	Cla011568	Watermelon (97103) v1	wmwmbB235
Cla97C01G004060	Bhi12G000395	Wax gourd	wgowmbB056

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G004060	Watermelon (97103) v2	wmbwmbB002
Cla97C01G004060	Silver-seed gourd	carwmbB0962
Cla97C01G004060	Cucumber (Gy14) v2	cgybwmbB170
Cla97C01G004060	Cucumber (Gy14) v2	cgybwmbB319
Cla97C01G004060	Cucumber (Gy14) v1	cgywmbB520
Cla97C01G004060	Cucumber (Gy14) v1	cgywmbB560
Cla97C01G004060	Cucurbita maxima (Rimu)	cmawmbB288
Cla97C01G004060	Cucurbita maxima (Rimu)	cmawmbB600
Cla97C01G004060	Cucurbita maxima (Rimu)	cmawmbB606
Cla97C01G004060	Cucurbita maxima (Rimu)	cmawmbB836
Cla97C01G004060	Cucurbita moschata (Rifu)	cmowmbB270
Cla97C01G004060	Cucurbita moschata (Rifu)	cmowmbB575
Cla97C01G004060	Cucurbita moschata (Rifu)	cmowmbB582
Cla97C01G004060	Cucurbita moschata (Rifu)	cmowmbB808
Cla97C01G004060	Wild cucumber (PI 183967)	cpiwmbB180
Cla97C01G004060	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G004060	Cucumber (Chinese Long) v3	cucwmbB178
Cla97C01G004060	Cucumber (Chinese Long) v3	cucwmbB351
Cla97C01G004060	Cucumber (Chinese Long) v2	cuwmbB177
Cla97C01G004060	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G004060	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G004060	Bottle gourd (USVL1VR-Ls)	lsiwmbB391
Cla97C01G004060	Melon (DHL92) v3.6.1	medwmbB006
Cla97C01G004060	Melon (DHL92) v3.6.1	medwmbB410
Cla97C01G004060	Melon (DHL92) v3.5.1	mewmbB008
Cla97C01G004060	Melon (DHL92) v3.5.1	mewmbB419
Cla97C01G004060	Watermelon (Charleston Gray)	wcgwmbB036
Cla97C01G004060	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G004060	Watermelon (97103) v1	wmwmbB050