Cla022307 (gene) Watermelon (97103) v1

Overview
NameCla022307
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr8 : 22480596 .. 22483608 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCAACAGCCTCTACCAGTTCCTCAACCCCTTCATGGAATGAGTCAACGTTACCTTCAGTTTAAAGAAGCTTCTGCAAATGCTCCTCTAAACAGTTTTCCCTCAAATTTTACAAGTAACGTGAAGGCAACATCATATGATCCAGAATTCTCGGTTTTGAACTTGGATGCAGCATCCAATAACAGAGTATCAGCCAATTCATCTCGTTCCTGTACACTACTACCTCCTGATTCTGTTTGCAATCCTCCCTTGAGAATTTCCAAGCCTTCAGGTATAGGGTTGCACATCAATAACATTATTGATACTGTAATGAAGGAGCATGGCCCAATTGCAGGCTTGGGAATGCAAGGTGTAAGCTATCACATACTGAGAAATGAAATAACCTGCTCAGAAAATGCCTCGTTGACAAGTTCCATCACTTTGAAGTCCTGCCATGCTGTTAAAGCCGAGCAATTTAGAAGTCCATATGAGACTAGAAATTTTGAATCCAACCAACCTTCTAACCTTGAGAAGATCAATAATTTTCATCCCAAAAGGAAACGGTAACTTATAAATTATTTCCCATGGTTCTATTTTCTTGTCATTTCTACTTTTCTCTAAGCTGCCAAGTGGATTACAATGTTTATTCAGGAAGAAAAGCTCAGTCAACAACAGTAGCGATGATTCAAAACGTTGCTGCAAATGTACAAAAACAAAATGCCTGAAACTGTTGGTGCCATTTGTTTTTCATTTCGTTTTTTTCTTTTCCTCCCATTTTGCTTATATTTCATTATTGTAAATTTTGACTTATTTATTCGCAGGTATTGCGATTGTTTTGCCGCTGGGATGTATTGTAGTGAGTCTTGTTCTTGTCAATTGTGCTTTAACAAACCTGAGAGTTTACATATTGTTCTTGAGAGGAGGCATCAAATTGAATCTCGAGATCCGTTTGCATTTGCTCCGAGGGTTATTGAGGACCGTAACGAGCTTCCAGTAAATAACGTGGGTGGTACGGTTAAATTTATTTTTATCATTTAATTACTCTAAAATGGCTGTTCATTATCGATTTTTCCACAGGAGAATGGAAGCCTATCGACGCCATCCTTGGCTAGACATAAAAAAGGGTGCAAGTGCAAGAAATCCATGTGCTCTAAACAATACTGCGAATGCTTTCAGGTTTGGAACCCATTTTTTGTGTTTGTCTTTAATAACCCTAGATTTTAAAAATATCTAATAAGTCTCTCAATTTTACAAATGTCAAATAGATCCTTGAACTTTTTAAATTTGTATATGATATATAGATCTTTAGAATGTTCTAACATTTTTGTAAATTAATGAATTTATTATAAAATTGAATTTTGTGTCTAATATAAAATTAGTTTTTCATTTTGTGTCTATTAGATTTAAAAAAAATATCAATTAGGTTAATAACCTATTGGACACAAAATTTGAAACTCATAAATGAATTAGACACAAAATCCAAAGTCTTGAGATTTATTAGAAATTCTTTAGTTCATAACCGTTTGATACTTTTCAAAGTTTAGACACAATATGAAAGTTTAAGAACTAAACTTATAATTTACCTTTATAATACCTCTTTTGAGGCATTCTAATAATGATCAGGCTAATGTTGGATGCTCGGATAGATGTCGATGTGACAACTGTAAAAATGTCCATGGGAAGAGAGAAGGTATGGTGTTCTTGAATTCTTTCATTCTCCATTTCCATAGACACAATTTGCACTGTGATAAAAAGCTTTTATAGAATATGATTTAGGGAACTGCACTTGAAGTGCTGAGTTAATTTGGTAACTATTGGCTGGTCTTAGTTTCTCATGCGTATAATCTTTGAAAAAGAACATTATTTGACTCCAGAGGTAGCAACTGGTCGAGCTGATGTCGGAAGAAGACTCGTTGGCAGGTTGATTAATGACCATAATGCGACAGCATTAAGGTAAGATGTTTTACATTCTGAGTTTTATGGTCAACAACACTTCACTCCGCAAACACCATCATTTCAGTACTTCGAGTAAGGCTTTTTTTGGCTAAATTATAAAAAATACTCCTAATCTTTTCTTTAATATAAAAAATACCTCTATCCTTTTAAAAATAGTAAATTATTTGGTCAACGTTTTCAAAACTATGTAGCAAAAATCTTTTAAAATGTAGGATAAAAAAAAAAAGTGCCAGTAACAATGACTAATAATGCCATTCAGACATCTCAATCTTTTGTCCAATATTCAAACGATTTTTCTACACCAAGTGACAATTTTGAAGCCTTTCACCTTTATGAAAGGTCAGTGATAGTGATAGTTTTGTAAGTTTGGAAGAAATATAGATATTTTTTAAATAGATATTACTTTAGTCTTATATTTTTTGTTTTGGTTTATTTTGATCCCTCTAATTTTAAAATGTTCCAAAGTTAAAATAATAGTGACCAAAGTGAACATGGGACATTTAGCTGCTCTATTATTATGGTGACTATTCTAAAAGGTATTTTCTATATAAATTGTTACTAATTCCTTTTCCCTTAACTTAGTCATGAAAAGGATTCCCCAAAATCCCGGTTCATGTCCGGAAGATGTCTCCCCTCGCCAGACTTTGACTCTACGAGCTCATCTTCTCCAGATTACAGCGACATTTTCGTAGAAACAAAGACAGACATATTGGATGTAAATTCTTTCAAGTGGCAGCAGATGAATTGTGATAATGGTGGAACCTCTTCAACGTCATTCATACCATCCAAGCTAAGGGGTTGTACAAACATTTCACGTATCGGCGAGCTACGCATCGGCAGTAGTTCTATCCTCTGTCGTCGTTCACCAGACACTCCCCTAATTCAGGCAGGCAACATGACATCCATTAATTGTATTAATGGAAGCTCTCCAGATAAAAAGGTAGCTTTGCCTCCTCTTTATGGTAACGAAAATGAGGTTGGGATGAATAATTCTTTGGGAAGGTTGAAGAGCCATAGATATATATTGAAGTCCATGCCTCCCCCTCCCCCACCCCTCACCCCACGCAACAAATAA

mRNA sequence

ATGTCGCAACAGCCTCTACCAGTTCCTCAACCCCTTCATGGAATGAGTCAACGTTACCTTCAGTTTAAAGAAGCTTCTGCAAATGCTCCTCTAAACAGTTTTCCCTCAAATTTTACAAGTAACGTGAAGGCAACATCATATGATCCAGAATTCTCGGTTTTGAACTTGGATGCAGCATCCAATAACAGAGTATCAGCCAATTCATCTCGTTCCTGTACACTACTACCTCCTGATTCTGTTTGCAATCCTCCCTTGAGAATTTCCAAGCCTTCAGGTATAGGGTTGCACATCAATAACATTATTGATACTGTAATGAAGGAGCATGGCCCAATTGCAGGCTTGGGAATGCAAGGTGTAAGCTATCACATACTGAGAAATGAAATAACCTGCTCAGAAAATGCCTCGTTGACAAGTTCCATCACTTTGAAGTCCTGCCATGCTGTTAAAGCCGAGCAATTTAGAAGTCCATATGAGACTAGAAATTTTGAATCCAACCAACCTTCTAACCTTGAGAAGATCAATAATTTTCATCCCAAAAGGAAACGTCATGAAAAGGATTCCCCAAAATCCCGGTTCATGTCCGGAAGATGTCTCCCCTCGCCAGACTTTGACTCTACGAGCTCATCTTCTCCAGATTACAGCGACATTTTCGTAGAAACAAAGACAGACATATTGGATGTAAATTCTTTCAAGTGGCAGCAGATGAATTGTGATAATGGTGGAACCTCTTCAACGTCATTCATACCATCCAAGCTAAGGGGTTGTACAAACATTTCACGTATCGGCGAGCTACGCATCGGCAGTAGTTCTATCCTCTGTCGTCGTTCACCAGACACTCCCCTAATTCAGGCAGGCAACATGACATCCATTAATTGTATTAATGGAAGCTCTCCAGATAAAAAGGTAGCTTTGCCTCCTCTTTATGGTAACGAAAATGAGGTTGGGATGAATAATTCTTTGGGAAGGTTGAAGAGCCATAGATATATATTGAAGTCCATGCCTCCCCCTCCCCCACCCCTCACCCCACGCAACAAATAA

Coding sequence (CDS)

ATGTCGCAACAGCCTCTACCAGTTCCTCAACCCCTTCATGGAATGAGTCAACGTTACCTTCAGTTTAAAGAAGCTTCTGCAAATGCTCCTCTAAACAGTTTTCCCTCAAATTTTACAAGTAACGTGAAGGCAACATCATATGATCCAGAATTCTCGGTTTTGAACTTGGATGCAGCATCCAATAACAGAGTATCAGCCAATTCATCTCGTTCCTGTACACTACTACCTCCTGATTCTGTTTGCAATCCTCCCTTGAGAATTTCCAAGCCTTCAGGTATAGGGTTGCACATCAATAACATTATTGATACTGTAATGAAGGAGCATGGCCCAATTGCAGGCTTGGGAATGCAAGGTGTAAGCTATCACATACTGAGAAATGAAATAACCTGCTCAGAAAATGCCTCGTTGACAAGTTCCATCACTTTGAAGTCCTGCCATGCTGTTAAAGCCGAGCAATTTAGAAGTCCATATGAGACTAGAAATTTTGAATCCAACCAACCTTCTAACCTTGAGAAGATCAATAATTTTCATCCCAAAAGGAAACGTCATGAAAAGGATTCCCCAAAATCCCGGTTCATGTCCGGAAGATGTCTCCCCTCGCCAGACTTTGACTCTACGAGCTCATCTTCTCCAGATTACAGCGACATTTTCGTAGAAACAAAGACAGACATATTGGATGTAAATTCTTTCAAGTGGCAGCAGATGAATTGTGATAATGGTGGAACCTCTTCAACGTCATTCATACCATCCAAGCTAAGGGGTTGTACAAACATTTCACGTATCGGCGAGCTACGCATCGGCAGTAGTTCTATCCTCTGTCGTCGTTCACCAGACACTCCCCTAATTCAGGCAGGCAACATGACATCCATTAATTGTATTAATGGAAGCTCTCCAGATAAAAAGGTAGCTTTGCCTCCTCTTTATGGTAACGAAAATGAGGTTGGGATGAATAATTCTTTGGGAAGGTTGAAGAGCCATAGATATATATTGAAGTCCATGCCTCCCCCTCCCCCACCCCTCACCCCACGCAACAAATAA

Protein sequence

MSQQPLPVPQPLHGMSQRYLQFKEASANAPLNSFPSNFTSNVKATSYDPEFSVLNLDAASNNRVSANSSRSCTLLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIAGLGMQGVSYHILRNEITCSENASLTSSITLKSCHAVKAEQFRSPYETRNFESNQPSNLEKINNFHPKRKRHEKDSPKSRFMSGRCLPSPDFDSTSSSSPDYSDIFVETKTDILDVNSFKWQQMNCDNGGTSSTSFIPSKLRGCTNISRIGELRIGSSSILCRRSPDTPLIQAGNMTSINCINGSSPDKKVALPPLYGNENEVGMNNSLGRLKSHRYILKSMPPPPPPLTPRNK
Homology
[Close]
BLAST of Cla022307 vs. TrEMBL
Match: A0A067FE47_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002213mg PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.2e-11
Identity = 57/196 (29.08%), Postives = 93/196 (47.45%), Query Frame = 1 

Query: 14  GMSQRYLQFKEASANAPL-NSFPSNFTSNVKAT--------SYDPEFSVLNLDAASNNRV 73
           GMS+R LQF+EA     + +S PSN  ++V ++        S  P+ S ++L+  S  R 
Sbjct: 317 GMSRRCLQFEEAQLKVTVCSSNPSNKLNDVTSSQLPTTPVESESPDPSHVDLNITSGKRQ 376

Query: 74  SANSSRSCT-LLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIAGLGMQGVSYHI 133
            A+     T + PP      PL +SKPSGIGLH+NN+I +  + HG   G+ +      +
Sbjct: 377 LASLPHPVTPVFPPHHTGKSPLTVSKPSGIGLHLNNLIKSSPEGHGAPVGVNLSSTEAGM 436

Query: 134 LRNEITCSENASLTSSITLKS--CHAVKAEQFRSPYETRNFESNQPSNLEKINNFHPKRK 193
           L ++ + + ++ ++ S             +   +P   R F S    N E+I+   PK+K
Sbjct: 437 LESKASIAASSLISESFDDMGPLNWPPPVDPNGTPLTMRKFNSEHADNFEEISQLSPKKK 496

Query: 194 RHEKDSPKSRFMSGRC 198
           R +  S        RC
Sbjct: 497 RKKSSSTVDSDGCKRC 512

[Close]
BLAST of Cla022307 vs. TrEMBL
Match: A0A067FE47_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002213mg PE=4 SV=1)

HSP 1 Score: 37.4 bits (85), Expect = 4.3e+01
Identity = 20/58 (34.48%), Postives = 33/58 (56.90%), Query Frame = 1 

Query: 183 HEKDSPKSRFMSGRCLPSPDFD----------STSSSSPDYSDIFVETKTDILDVNSF 231
           H KD+ KSR +SGR +PSP  D          S + +S D +++ +E   +I+DV+ +
Sbjct: 689 HGKDASKSRILSGRYVPSPKSDLTILSSYVKSSRTLNSSDSNEMLLEKSREIVDVDPY 746


HSP 2 Score: 78.2 bits (191), Expect = 2.2e-11
Identity = 57/196 (29.08%), Postives = 93/196 (47.45%), Query Frame = 1 

Query: 14  GMSQRYLQFKEASANAPL-NSFPSNFTSNVKAT--------SYDPEFSVLNLDAASNNRV 73
           GMS+R LQF+EA     + +S PSN  ++V ++        S  P+ S ++L+  S  R 
Sbjct: 317 GMSRRCLQFEEAQLKVTVCSSNPSNKLNDVTSSQLPTTPVESESPDPSHVDLNITSGKRQ 376

Query: 74  SANSSRSCT-LLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIAGLGMQGVSYHI 133
            A+     T + PP      PL +SKPSGIGLH+NN+I +  + HG   G+ +      +
Sbjct: 377 LASLPHPVTPVFPPHHTGKSPLTVSKPSGIGLHLNNLIKSSPEGHGAPVGVNLSSTEAGM 436

Query: 134 LRNEITCSENASLTSSITLKS--CHAVKAEQFRSPYETRNFESNQPSNLEKINNFHPKRK 193
           L ++ + + ++ ++ S             +   +P   R F S    N E+I+   PK+K
Sbjct: 437 LESKASIAASSLISESFDDMGPLNWPPPVDPNGTPLTMRKFNSEHADNFEEISQLSPKKK 496

Query: 194 RHEKDSPKSRFMSGRC 198
           R +  S        RC
Sbjct: 497 RKKSSSTVDSDGCKRC 512

[Close]
BLAST of Cla022307 vs. TrEMBL
Match: V4UMX3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007369mg PE=4 SV=1)

HSP 1 Score: 37.4 bits (85), Expect = 4.3e+01
Identity = 20/58 (34.48%), Postives = 33/58 (56.90%), Query Frame = 1 

Query: 183 HEKDSPKSRFMSGRCLPSPDFD----------STSSSSPDYSDIFVETKTDILDVNSF 231
           H KD+ KSR +SGR +PSP  D          S + +S D +++ +E   +I+DV+ +
Sbjct: 689 HGKDASKSRILSGRYVPSPKSDLTILSSYVKSSRTLNSSDSNEMLLEKSREIVDVDPY 746


HSP 2 Score: 72.0 bits (175), Expect = 1.6e-09
Identity = 66/210 (31.43%), Postives = 97/210 (46.19%), Query Frame = 1 

Query: 10  QPLHGMSQRYLQFKEASANAPLN----SFPSNFTSNVK--ATSYD---PEFSVLNLDAAS 69
           Q   GM +R LQF EA  N   N    S+P++  +N +  AT  D   PE S ++L   S
Sbjct: 345 QHQRGMLRRCLQFGEAQLNIITNNPSFSYPTSIAANSRLLATPSDSELPESSCVDLTTTS 404

Query: 70  NNRVSANSSRSCTLLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIAGLGMQGVS 129
           +N+  A S     +LPP +  N  L  SKPSGIGLH+N+I++ V         L ++   
Sbjct: 405 SNKQLAYSQPVTAMLPPQNSGNSSLAGSKPSGIGLHLNSIVNAVPMGFSSTTSLKVEEKD 464

Query: 130 Y------------HILRN----EITCSEN-ASLT-SSITLKSCHAVK----------AEQ 183
           Y            +++ N    E   +EN AS+  SS T +S H ++           E 
Sbjct: 465 YSSAWRISDSIPSNVIENSAGTEDRRNENKASIAMSSATSQSSHGLEPSKDPLLLKPIEL 524

[Close]
BLAST of Cla022307 vs. TrEMBL
Match: B9HA26_POPTR (Cysteine-rich polycomb-like family protein OS=Populus trichocarpa GN=POPTR_0006s26740g PE=4 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-07
Identity = 56/188 (29.79%), Postives = 90/188 (47.87%), Query Frame = 1 

Query: 8   VPQPLHGMSQRYLQFKEA----------SANAPLNSF----PSNFTSNVKATSYDPEFSV 67
           V Q   GMS+R LQF++A          S N  +N F    P++ T      S   E ++
Sbjct: 270 VSQLQRGMSRRCLQFEQAQQETTKDGTYSPNPAINLFGSISPASSTELEILDSSQVELTI 329

Query: 68  LN-LDAASNNRVSANSSRSCTLLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIA 127
            +  +   +   SAN S  C           P+ +SKPSGIGLH+N+I++T+        
Sbjct: 330 SSHKEQTMSAMFSANISGKC-----------PVAVSKPSGIGLHLNSIVNTLP------M 389

Query: 128 GLGMQG--VSYHILRNEITCSENASLTSSITLKSCHAVKAEQFRSPYETRNFESNQPSNL 179
           G G  G  +S+H++ N+I+CS+ ++L   ++L +   V   Q ++   T +  S    N+
Sbjct: 390 GSGASGPIMSHHLVENKISCSKLSNLVERVSLTAGDGVL--QTKASLATSSTTSESFHNM 438

[Close]
BLAST of Cla022307 vs. TrEMBL
Match: W9S4Z9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005620 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 70/233 (30.04%), Postives = 107/233 (45.92%), Query Frame = 1 

Query: 163 ESNQPSNLEKINNFHPKRKRHEKDSPKSRFMSGRCLPSPDFDSTSSS----SP----DYS 222
           ES  P NL  +     +   H KD+PKSRF+S R LPSPD    SS+    SP    + S
Sbjct: 399 ESINPHNLTPLTPSF-QYSDHGKDAPKSRFISRRYLPSPDSAILSSNEKTKSPPRDLEKS 458

Query: 223 DIFVETKTDILDVNSFKWQ---QMNCDNGGTSSTSFIPSK-------------------L 282
           D+ +E   ++ D  S++WQ    +   +  +S    +PS                     
Sbjct: 459 DVLLEVSEELPDEGSYEWQVDYNVGIADSSSSRNDSVPSVPHLTQHPDTSVPMASATSFR 518

Query: 283 RGCTNISR----IGELRIGSSSILCRRSPDTPL------------IQAGNMTSINCING- 342
           R   N+S+     G  R+ S+S+    SP  P+            + +G++  ++ +   
Sbjct: 519 RDYRNLSQNQLCPGSARLLSNSMRRHGSPLAPMTRLCEATKSRQGLDSGSVQLVDILEDE 578

[Close]
BLAST of Cla022307 vs. NCBI nr
Match: gi|568859603|ref|XP_006483327.1| (PREDICTED: CRC domain-containing protein TSO1 isoform X2 [Citrus sinensis])

HSP 1 Score: 82.0 bits (201), Expect = 2.2e-12
Identity = 60/212 (28.30%), Postives = 100/212 (47.17%), Query Frame = 1 

Query: 14  GMSQRYLQFKEASANAPL-NSFPSNFTSNVKAT--------SYDPEFSVLNLDAASNNRV 73
           GMS+R LQF+EA     + +S PSN  ++V ++        S  P+ S ++L+  S  R 
Sbjct: 317 GMSRRCLQFEEAQLKVTVCSSNPSNKLNDVTSSQLPTTPVESESPDPSHVDLNITSGKRQ 376

Query: 74  SANSSRSCT-LLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIAGLGMQGVSYHI 133
            A+     T + PP      PL +SKPSGIGLH+NN+I +  + HG   G+ +      +
Sbjct: 377 LASLPHPVTPVFPPHHTGKSPLTVSKPSGIGLHLNNLIKSSPEGHGAPVGVNLSSTEAGM 436

Query: 134 LRNEITCSENASLTSSITLKS--CHAVKAEQFRSPYETRNFESNQPSNLEKINNFHPKRK 193
           L ++ + + ++ ++ S             +   +P   R F S    N E+I+   PK+K
Sbjct: 437 LESKASIAASSLISESFDDMGPLNWPPPVDPNGTPLTMRKFNSEHADNFEEISQLSPKKK 496

Query: 194 RHEKDS-------PKSRFMSGRCLPSPDFDST 207
           R +  S        +      RCL  P+++ T
Sbjct: 497 RKKSSSTVDSDGCKRCNCKKTRCLKLPEYEDT 528

[Close]
BLAST of Cla022307 vs. NCBI nr
Match: gi|568859603|ref|XP_006483327.1| (PREDICTED: CRC domain-containing protein TSO1 isoform X2 [Citrus sinensis])

HSP 1 Score: 37.4 bits (85), Expect = 6.2e+01
Identity = 20/58 (34.48%), Postives = 33/58 (56.90%), Query Frame = 1 

Query: 183 HEKDSPKSRFMSGRCLPSPDFD----------STSSSSPDYSDIFVETKTDILDVNSF 231
           H KD+ KSR +SGR +PSP  D          S + +S D +++ +E   +I+DV+ +
Sbjct: 666 HGKDASKSRILSGRYVPSPKSDLTILSSYVKSSRTLNSSDSNEMLLEKSREIVDVDPY 723


HSP 2 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 57/196 (29.08%), Postives = 93/196 (47.45%), Query Frame = 1 

Query: 14  GMSQRYLQFKEASANAPL-NSFPSNFTSNVKAT--------SYDPEFSVLNLDAASNNRV 73
           GMS+R LQF+EA     + +S PSN  ++V ++        S  P+ S ++L+  S  R 
Sbjct: 317 GMSRRCLQFEEAQLKVTVCSSNPSNKLNDVTSSQLPTTPVESESPDPSHVDLNITSGKRQ 376

Query: 74  SANSSRSCT-LLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIAGLGMQGVSYHI 133
            A+     T + PP      PL +SKPSGIGLH+NN+I +  + HG   G+ +      +
Sbjct: 377 LASLPHPVTPVFPPHHTGKSPLTVSKPSGIGLHLNNLIKSSPEGHGAPVGVNLSSTEAGM 436

Query: 134 LRNEITCSENASLTSSITLKS--CHAVKAEQFRSPYETRNFESNQPSNLEKINNFHPKRK 193
           L ++ + + ++ ++ S             +   +P   R F S    N E+I+   PK+K
Sbjct: 437 LESKASIAASSLISESFDDMGPLNWPPPVDPNGTPLTMRKFNSEHADNFEEISQLSPKKK 496

Query: 194 RHEKDSPKSRFMSGRC 198
           R +  S        RC
Sbjct: 497 RKKSSSTVDSDGCKRC 512

[Close]
BLAST of Cla022307 vs. NCBI nr
Match: gi|568859601|ref|XP_006483326.1| (PREDICTED: CRC domain-containing protein TSO1 isoform X1 [Citrus sinensis])

HSP 1 Score: 37.4 bits (85), Expect = 6.2e+01
Identity = 20/58 (34.48%), Postives = 33/58 (56.90%), Query Frame = 1 

Query: 183 HEKDSPKSRFMSGRCLPSPDFD----------STSSSSPDYSDIFVETKTDILDVNSF 231
           H KD+ KSR +SGR +PSP  D          S + +S D +++ +E   +I+DV+ +
Sbjct: 689 HGKDASKSRILSGRYVPSPKSDLTILSSYVKSSRTLNSSDSNEMLLEKSREIVDVDPY 746


HSP 2 Score: 78.2 bits (191), Expect = 3.2e-11
Identity = 57/196 (29.08%), Postives = 93/196 (47.45%), Query Frame = 1 

Query: 14  GMSQRYLQFKEASANAPL-NSFPSNFTSNVKAT--------SYDPEFSVLNLDAASNNRV 73
           GMS+R LQF+EA     + +S PSN  ++V ++        S  P+ S ++L+  S  R 
Sbjct: 317 GMSRRCLQFEEAQLKVTVCSSNPSNKLNDVTSSQLPTTPVESESPDPSHVDLNITSGKRQ 376

Query: 74  SANSSRSCT-LLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIAGLGMQGVSYHI 133
            A+     T + PP      PL +SKPSGIGLH+NN+I +  + HG   G+ +      +
Sbjct: 377 LASLPHPVTPVFPPHHTGKSPLTVSKPSGIGLHLNNLIKSSPEGHGAPVGVNLSSTEAGM 436

Query: 134 LRNEITCSENASLTSSITLKS--CHAVKAEQFRSPYETRNFESNQPSNLEKINNFHPKRK 193
           L ++ + + ++ ++ S             +   +P   R F S    N E+I+   PK+K
Sbjct: 437 LESKASIAASSLISESFDDMGPLNWPPPVDPNGTPLTMRKFNSEHADNFEEISQLSPKKK 496

Query: 194 RHEKDSPKSRFMSGRC 198
           R +  S        RC
Sbjct: 497 RKKSSSTVDSDGCKRC 512

[Close]
BLAST of Cla022307 vs. NCBI nr
Match: gi|567916950|ref|XP_006450481.1| (hypothetical protein CICLE_v10007369mg [Citrus clementina])

HSP 1 Score: 37.4 bits (85), Expect = 6.2e+01
Identity = 20/58 (34.48%), Postives = 33/58 (56.90%), Query Frame = 1 

Query: 183 HEKDSPKSRFMSGRCLPSPDFD----------STSSSSPDYSDIFVETKTDILDVNSF 231
           H KD+ KSR +SGR +PSP  D          S + +S D +++ +E   +I+DV+ +
Sbjct: 689 HGKDASKSRILSGRYVPSPKSDLTILSSYVKSSRTLNSSDSNEMLLEKSREIVDVDPY 746


HSP 2 Score: 73.9 bits (180), Expect = 6.0e-10
Identity = 58/206 (28.16%), Postives = 92/206 (44.66%), Query Frame = 1 

Query: 5   PLPVPQPLHGMSQRYLQFKEASANAPLNSFPSNFTSNVKATSYDPEFSVLNLDAASNNRV 64
           P  V     GM +R LQF+EA    P  +   + +S  K  + +P  S   L+    +  
Sbjct: 275 PNKVKNDQGGMHRRCLQFEEAP---PCATGKRDSSSTEKVNNSEPPASTAELEIVKVSYA 334

Query: 65  SANSSRSCTLLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIAG-------LGMQ 124
           + +  +    LPP    + PL + KPSGIGLH+N+I++ V    G           +G+Q
Sbjct: 335 ATSKRQMGASLPPLYGGSSPLTVPKPSGIGLHLNSIVNAVPVVRGATTSIKLADHYIGLQ 394

Query: 125 ------GVSYHILRNEITCSENASLTSSITLKSCHAVKAEQFRSPYETRNFESNQPSNLE 184
                  VS+ +L N    +E +   SS   +S H V+ E   SP E R  +S    + +
Sbjct: 395 VMKSSAVVSHLLLENVRDNTETSIAASSSINQSPHTVEFEHHGSPLEERKSDSQNVDSYK 454

Query: 185 KINNFHPKRKRHEKDSPKSRFMSGRC 198
           ++N +  ++KR    S K      RC
Sbjct: 455 ELNQYSSQKKRKRTPSSKDSDGCKRC 477

[Close]
BLAST of Cla022307 vs. NCBI nr
Match: gi|359476108|ref|XP_002282493.2| (PREDICTED: CRC domain-containing protein TSO1-like [Vitis vinifera])

HSP 1 Score: 73.9 bits (180), Expect = 6.0e-10
Identity = 69/225 (30.67%), Postives = 101/225 (44.89%), Query Frame = 1 

Query: 10  QPLHGMSQRYLQFKEASANAPLN----SFPSNFTSNVK--ATSYD---PEFSVLNLDAAS 69
           Q   GM +R LQF EA  N   N    S+P++  +N +  AT  D   PE S ++L   S
Sbjct: 345 QHQRGMLRRCLQFGEAQLNIITNNPSFSYPTSIAANSRLLATPSDSELPESSCVDLTTTS 404

Query: 70  NNRVSANSSRSCTLLPPDSVCNPPLRISKPSGIGLHINNIIDTVMKEHGPIAGLGMQGVS 129
           +N+  A S     +LPP +  N  L  SKPSGIGLH+N+I++ V         L ++   
Sbjct: 405 SNKQLAYSQPVTAMLPPQNSGNSSLAGSKPSGIGLHLNSIVNAVPMGFSSTTSLKVEEKD 464

Query: 130 Y------------HILRN----EITCSEN-ASLT-SSITLKSCHAVK----------AEQ 189
           Y            +++ N    E   +EN AS+  SS T +S H ++           E 
Sbjct: 465 YSSAWRISDSIPSNVIENSAGTEDRRNENKASIAMSSATSQSSHGLEPSKDPLLLKPIEL 524

Query: 190 FRSPYETRNFESNQPSNLEKINNFHPKRKRHEKDSPKSRFMSGRC 198
              P + R F S    +LE+ N   PK++R +  S        RC
Sbjct: 525 HEIPCDKRKFNSEHMDSLEEFNQPSPKKRRKKASSTNDGDGCKRC 569

The following BLAST results are available for this feature:
BLAST of Cla022307 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067FE47_CITSI2.2e-1129.08Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002213mg PE=4 SV=1[more]
A0A067FE47_CITSI4.3e+0134.48Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002213mg PE=4 SV=1[more]
V4UMX3_9ROSI4.3e+0134.48Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007369mg PE=4 SV=1[more]
B9HA26_POPTR1.1e-0729.79Cysteine-rich polycomb-like family protein OS=Populus trichocarpa GN=POPTR_0006s... [more]
W9S4Z9_9ROSA1.3e-0630.04Uncharacterized protein OS=Morus notabilis GN=L484_005620 PE=4 SV=1[more]
BLAST of Cla022307 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|568859603|ref|XP_006483327.1|2.2e-1228.30PREDICTED: CRC domain-containing protein TSO1 isoform X2 [Citrus sinensis][more]
gi|568859603|ref|XP_006483327.1|6.2e+0134.48PREDICTED: CRC domain-containing protein TSO1 isoform X2 [Citrus sinensis][more]
gi|568859601|ref|XP_006483326.1|6.2e+0134.48PREDICTED: CRC domain-containing protein TSO1 isoform X1 [Citrus sinensis][more]
gi|567916950|ref|XP_006450481.1|6.2e+0134.48hypothetical protein CICLE_v10007369mg [Citrus clementina][more]
gi|359476108|ref|XP_002282493.2|6.0e-1030.67PREDICTED: CRC domain-containing protein TSO1-like [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla022307Cla022307.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla022307Cla97C08G156480Watermelon (97103) v2wmwmbB100
Cla022307ClCG08G013160Watermelon (Charleston Gray)wcgwmB400
Cla022307CmaCh05G004000Cucurbita maxima (Rimu)cmawmB753
Cla022307Lsi08G011780Bottle gourd (USVL1VR-Ls)lsiwmB465
Cla022307Carg09325Silver-seed gourdcarwmB0133
Cla022307Bhi04G000804Wax gourdwgowmB310
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla022307Wax gourdwgowmB602
Cla022307Wax gourdwgowmB604
Cla022307Watermelon (97103) v1wmwmB058
Cla022307Watermelon (97103) v1wmwmB011
Cla022307Watermelon (97103) v1wmwmB062
Cla022307Cucumber (Gy14) v1cgywmB116
Cla022307Cucumber (Gy14) v1cgywmB289
Cla022307Cucumber (Gy14) v1cgywmB566
Cla022307Cucurbita maxima (Rimu)cmawmB045
Cla022307Cucurbita maxima (Rimu)cmawmB148
Cla022307Cucurbita maxima (Rimu)cmawmB420
Cla022307Cucurbita moschata (Rifu)cmowmB134
Cla022307Cucurbita moschata (Rifu)cmowmB414
Cla022307Cucurbita moschata (Rifu)cmowmB415
Cla022307Cucurbita moschata (Rifu)cmowmB417
Cla022307Cucurbita moschata (Rifu)cmowmB748
Cla022307Wild cucumber (PI 183967)cpiwmB112
Cla022307Wild cucumber (PI 183967)cpiwmB115
Cla022307Wild cucumber (PI 183967)cpiwmB210
Cla022307Wild cucumber (PI 183967)cpiwmB301
Cla022307Wild cucumber (PI 183967)cpiwmB598
Cla022307Melon (DHL92) v3.5.1mewmB221
Cla022307Melon (DHL92) v3.5.1mewmB307
Cla022307Melon (DHL92) v3.5.1mewmB350
Cla022307Melon (DHL92) v3.5.1mewmB400
Cla022307Melon (DHL92) v3.5.1mewmB502
Cla022307Watermelon (Charleston Gray)wcgwmB020
Cla022307Watermelon (Charleston Gray)wcgwmB089
Cla022307Watermelon (Charleston Gray)wcgwmB277
Cla022307Watermelon (Charleston Gray)wcgwmB360
Cla022307Cucumber (Chinese Long) v2cuwmB107
Cla022307Cucumber (Chinese Long) v2cuwmB110
Cla022307Cucumber (Chinese Long) v2cuwmB211
Cla022307Cucumber (Chinese Long) v2cuwmB299
Cla022307Cucumber (Chinese Long) v2cuwmB578
Cla022307Cucurbita pepo (Zucchini)cpewmB101
Cla022307Cucurbita pepo (Zucchini)cpewmB348
Cla022307Cucurbita pepo (Zucchini)cpewmB542
Cla022307Cucurbita pepo (Zucchini)cpewmB545
Cla022307Cucurbita pepo (Zucchini)cpewmB782
Cla022307Bottle gourd (USVL1VR-Ls)lsiwmB183
Cla022307Bottle gourd (USVL1VR-Ls)lsiwmB294
Cla022307Bottle gourd (USVL1VR-Ls)lsiwmB432
Cla022307Cucumber (Gy14) v2cgybwmB105
Cla022307Cucumber (Gy14) v2cgybwmB107
Cla022307Cucumber (Gy14) v2cgybwmB198
Cla022307Cucumber (Gy14) v2cgybwmB541
Cla022307Melon (DHL92) v3.6.1medwmB217
Cla022307Melon (DHL92) v3.6.1medwmB300
Cla022307Melon (DHL92) v3.6.1medwmB348
Cla022307Melon (DHL92) v3.6.1medwmB393
Cla022307Melon (DHL92) v3.6.1medwmB489
Cla022307Silver-seed gourdcarwmB0189
Cla022307Silver-seed gourdcarwmB0978
Cla022307Cucumber (Chinese Long) v3cucwmB121
Cla022307Cucumber (Chinese Long) v3cucwmB123
Cla022307Cucumber (Chinese Long) v3cucwmB219
Cla022307Cucumber (Chinese Long) v3cucwmB311
Cla022307Cucumber (Chinese Long) v3cucwmB605
Cla022307Watermelon (97103) v2wmwmbB099
Cla022307Watermelon (97103) v2wmwmbB085
Cla022307Watermelon (97103) v2wmwmbB094
Cla022307Watermelon (97103) v2wmwmbB110