Cla022268 (gene) Watermelon (97103) v1

NameCla022268
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 *-*- D7MTZ6_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr8 : 22111207 .. 22118037 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCTCGGCTACCTCCGTTGCACTTTTGCCCGCAAAATTTGTATGCAGGGGACGCGTTGAGCCGTCGAAATCGAAGTTTCTTGCTCCAAGCTCAAAATCGTCAATTCCATGTCATTCCGTTTCAATTTCGTCTCGGTTCCATCGGCGCAAGCCATTCAGAATTCAGGCGTCGGTTTCGATATCGGATCCTCAAGTTCGAACGGGTCCTGATGATCTCGTTGCGTCCATCCTCTCAAAGGTAATTTTTCGAAATTTGCTTAGTTTAATTTGGTTTTCTTATCGGAACTGGTTCTAGGGTAAATTATTGCCGATTTTGAATCGAAATTAGGAAATTGTAGTAGAAAATGTTTAGCAAATAGAGGCCGGTAAGTTGCGGCAATTAGTGGTACTGGACTTGGAAATTTCTAGAAATTCTCTCTCGAGGAAGATCATTCGGTTGGTAAAGGGAGTTTTACGTGATTTTCACTTGAACCTCTTAAGATTTCAGAATAGTCTTGGTCAACAATGCATAAGTGTAATTTTAGATTCAGTGCCATTAATTTTTGCTGGGAGTTCATAATTCTCATTGTGGAAAGCTTATGTTACTCTTTGAATCAACAGGTGACAGGAAGTGATAGAGGAGTTTTACTAACTGAAGAAAAACATAAAGAGGTTGCTGAAGTGGCTCAAGAATTGCAAAAATATTGTGTAAACGAACCTGTTAAATGTCCTCTCATATTTGGAGGTAAAACTTAAACAGTTCTGCTGTTTCTTGTTTGATATGTTTGAATATCTACTCATCTTGCACACAGAACCTATATTTGAGCTTCGGTTCAAATATTTTCAAATCAACTTATTTTAAATACTGAAGATGATTTAATTCTTTATCTAGTTTGAAATAGAAAAATTTAAGTTACCTTTTTATAACTATCTTGGTTTTAGTTTTTGAAAATTAAGCCTATGAACTCTACTTCTGCATATAAGTTTGTTTTCTGTTTTGTCATCTACTTTATAGCCATATTTTAAAACTAAAAACAGTAGATTTTAAAAACTTATTTTTGTTTTTTAAATTTTGCTAAAAAATTCAAATATTTCCTTAATGAAAGATAATGACTATGATAAAAAAATTGTGAAAAACTAACTAAAATTTCAAAAACCAAATGGCTATCAACACTAGGCTTTTCTTTTTTCTTTTTCCCTTTTTTTTTGGATGTTTGTTGAAAAAAGGAAATGAAGTAAGAATTTAACTCATATAGTCCTTGTCCTAATTTACAAATTAAAATATAACAAGCTTAAGTTGCTAATTTACTTTGAAAATTTAGAAAATCACGAGAAATCAAACCATTTTTGTCTAAATCTTTGTAGAAGTAAGATTATGCTTTAAAATTAGGCAGGTTCCTACATCATTTGATTTGAAGGGATAACAAATATCTGATGAGTTGAAATCCATCCGAATTTATAATCACATTTAAACCCAAAAGAGAATATTTCTTCCAAGTTGCTCATTTTCTCAGCTCTAGTTTGGCTAACACAATTAAATGCTATTTCAGATTGGGATGTTGTGTATTGCTCTGTACCAACATCGCCTGGGGGTGGATACAGAAGTGCAGTGGGTCGCATTTTTTTCAAGACAAAGGAAATGATTCAGGTTGTGGAAGCTCCTGATACTGTCAAAAATAAGGTGTCCTTTTCTGCTCTTGGTTTCCTAGATGGACAGGTCTCTTTGACAGGTAAAATCTAAAAGTTCTTCTGTAAACAATAAAACTTGAGACCTCTATTTCTAAACATATCGGGAGATTTAACCAATGGCTGGAAAAGCAAGGTCACATTAACATAGCTGACATAGCCTTTGGATTTTAGTTGACCACTAGTTTTTGGAATTCGATATGGGTTTTGAGAGTAGTACTTTTAAGTGAAATACTTTCTCTTTGGTGTACTTCTTTTGAAGGAACTAAATGAAAAATTGTTTCACTTAAAATATAACTCTCAAAAGTCTATCTCGACAGATTTTTTAGAAAATTTAGTTGCTCTCAGCTTTGTAATATACATCCCCAGCAAATGAACCAAATTCAAGAAACTAAATCAGCTGCCAATTGTCATTGAGACCTTAGTAAGTGCTTCTTCTCAAAGTCATCTCTATAAACTGGTTTTTAGGTGAGTTTAAAATTTTGAAACTACTTTTGAATATGTCTTGAAACGAGATGAAAATTTTGAAAAATGTTAGACTACATCCACAATTTGATTACATGGTTATGACTACAGCATCTGAGATTTTTGGCGTCATGATTCTGAACCACCATGGACTCATGGACCAAGCTTTAAGAATTTAAGACGCCAACCTTGACTCTTAGAATTGATTTGGATGGTTATGTGTTAGGCCACCAATATTACAAACTTATGTTAGGAGGGGTAGAAGGGGACATAAGTTTGTAAACATTATGTTTCATCCATTGCCTTAAATTTTCCGGTCGATGGAGGGAGATTCTCCCGAGTCCTCCCTTCCTTGATAAATGAAGAATTTTGTGGCATATTTGGTTTTGTGCTATCTTATGAAATGTGTGACTTGAGAGGAATATTAGAATTTTTCAAGTGATAAAAGAAATCTTTATGAGCTTCCGTTAATTGGATTTTTTGTAATTATCAATTTGGTGTTAGTTTTCGGATTGGAGTCCGTTTTTGTACGCCCTTATATATTCTTTTCATTTTGCTCAATAAAAACATGTTCCATATTCATATATTTATAGGTAAATTGAAGGCTCTAGATGATAAATGGATTCAAGTTGTGTTCGAGTCTCCTGAACTGAAAGTTGGAGGATTAGAGTTTCGATATGGTGGCGAAAGTGAGGTACAACTTCAGATTACATACATAGATGACAAGATTCGGTTGGGAAAGGGTTCTAGAGGTTCATTATTTGTCTTTCAAAGACGAGTTTGAAGCTACTAAATTAAGTTGTGATTATTGCTCGTTTGATATCTCGATGCTGATTTTTGTACTTATAGACCCTGGTGTAGAAAGCTAATATTATTAATATACATGAGCTTTTTATTATGAAAATACTCTCTAGTTCTTTGTAAGCTGAATTGTATAAAATATTTCGTTAAAATTTGAAAAGTTATATTAATATTCTTAACATTTGAAAAAAGTGTCTCGGGCATAAACTAGTTGGATGACTTTGCAAAAGAATCAATGAAATGTTGTTTGGTCCTCTCTCTCAATTGTTTCCATCACCCAATCTTACCTTTTCAATTGCGAAGATTGAGCGGTCTACATTTAGATTAACAACATTCAAAAGTATTTAAAAAATAAAGATTTTAAATAATTTTTAAACACTTGTATTTCTTTTAAATTGACTTATTTTTTAAATTAAATATTTAAAAAGTATTTCAAACATACCCGTCATGTAATTGAGCCCTCATCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTAATATTAACCTAACACCAACATTTGTTGTAATAAAAAATACATAAAAACAAGTAAACCTAGCTTCAAATAGGAAAACAAATCGTGGGGTAAATTCGAAAACGAGCCTCAATGCCACGCTTAAAATTTTAAAAAAAATGTATTTCGGGCCCAGCCCAATAACAAATGCCAAAATTTCCAGAAAATGTAGAATGAAAAAATGAAAAATAACTCGAAGAAAGGAGGGGCTGCAGTCTGCTGAGTGCGACGACGAGGGGGACGGCGGAGCACAGCCAGCTATAGGAACCTCGCCGCAGCCGTCGGTTTCACCGGCTTCGTCGAAACTTTGGCCTTCTCTATTACCTAGTTTCTTCTTTCCTATCGAATCACGAAGTGAAATCCAGAGCAGAATATTCGGCAATCTCGACGATGTTTACGACGGTGAGTTATCCTCTATCGTTCCTTTATCATACATTTTTCTGTTCAGAAGTTTTCCTATATGATGTTTACGTGTTCATTTTGGTGGTTCAGTTAGCAATTGAATCGCCACCGTCCCAGAATCTTGTGCTTGGATTTCTGAACGGAGCCCTTAACTCCCTCAAGCGTGATATTTCTCGGATGTTCGCTGTCCTTTACGGCCGACCTAACATTGATGAAGTGGCGAGGTAAGATGACTACACATTTCGAGCCTCTGGTCTGCTTCGGCTAAAAGGAGTGCGAAACTTCATCGACTTTACAGTAATTAATCGACCTTTTGTTTGTTAAACATTAAGAAATGGAAAGCATCTTCATTTTTGGTTTATTTCTTTTGCCTTCTTGCTTTAAATTTGCCCGACCTGGCTTTGAATTTCGAGGAATTTATATATGCTTTCTGATTCTAAACATTACATGCGAAGGTCTAACGAGGATGAGGATTCATTGCATCCTGCTCTTAAAAGTTTAATGACAACTGTCGGTGACCATTGCGATTTGAGATCTTCGGATTGCTTTTCAGAAAAGCGTAATTTTGATGGCGAAGGAGATCCGCCGGCTGTTTTCAACGTGTTGGACGCTCTGCTCAAGGGTAGTCTGGACCGTTTGAAAGCTATGAGGTGATTTTGCTTTTCTTTAATCAGATTTGCTTTTCACTCTGGTACTGTAATTCGAAACCTCGATACTTGAACATATATTCTTACTTAATGATGAAAAGCATCCTGCTTATTTAATGATGAATACCATATAGGTAAACCTTGTTCAATGCATAGAATCATTGAATATTAAAAGATCGTGACAACTATAAAATTTTACTTGCACTGACTGCAGCTAATTTGTATGAGCCTATTTATCCTTAAGTAGCTGGGGGTATATTCTGTGTTAAATGATAGGCAGATGCTATAGCTCACGTTTGCTGGGCACAAACCACTGTCTACTTGGAGAATATAGGTACTTATGCAAGGGTTGAACTACCTTATTCTGTGATAGTTAGTTGTAAGTGAACTTTGCTATCGAGCTATAATTCTGTTATGAATGACCATCAATTGAAGGTTTAGCGGGAGAGAAGGGACACAAAAAGAGTTTAATAAGGTTTTAGGGAATTTGTGGGAACTAAGGGAAAACTTGGAATTTTGAAACTGCTGATCTTTTTACTAAAAGATCTGGGTTTCCTCCGTTTTTCTTCATTAAGAAATCAATAGTCCTTTCACATCTGTCTTTATACTTACTCAAATAAATTTTATGTATTTTTTTCCACATAGTCTCGTTGCTTCTTTCTTTAGAGTTTAATATTCATTGAGTGCAATGACATATGATTGTTGATGTACTATTATTCCAAGTTGTGATGAGGACGATAAAATTGTATGACTGATGGAATCTTTTAATCTTCATTTTTATCTCCCATTTGTTTTTATGCCATCAAATAAAATCTAATGATTTTATACGCGTTAAATGATTACAAAGTACGATCTTGTAAACATCTATTAAATGCCTAACATTGTACAGGGAAAGCATATGTTTGGCGAAGTCAGGTCTTCAGAAATGTTTTTTGGAGGCTGTTCCGCAACCTGACTACACAGTCATGGTTAGGGATTTGTGTTTAAAAGGAAAGTTAGGAGCAGCCCTTCTGCTTCGGAGAAAGTTGATGAGAGAAGGTTTTGTTGTTGATTTACTCACACATAATTATCTTCTTAATGGACTGTGTATAAACTGTGATATGGAGATGGCAGATTCTCTTTTTAGGGAAATGTTAGAAAGTGGTCCTTCTCCCAGTTGTGCCACATACAACATTATTATTAAGGGTTTCTGCCTTCATATGAATATGGATAAAGCTCTTGACCTATTTTATACTATGGCTAATAGTGGTATTAGACCAAGTAGAATTACCTATAATATACTTTTACATGCATTGTGCAAAAGAGGCATCTTGGAGGATGCTAGGAAGCTTCTTGAAAATATCCTAGATGATGATATTAAAACAACAGATGATGCAATCAGATCAACTATACTAATGGATGGTTATTTTAAAGGTGGAGATATGATTCAGGCTGTTGCTTTATGGGATGAGATGGTTGAAAAGAAGACGGAGATTGATGCTGTTGCATACAATGTCCTTATTCACGGGCTTTGTTTGAATCAAGACAAGAAAATTGCACTTGGCTATGTTGTTGATATGCTTAAGAGGGGTTTTCTTCCCGACATCTTTACATACAACACTCTAATCAGTGATCTTTGTAAAGAGGGCCAATTTGGTGAGGCTTACTATATCCATGATGTCATGTCAAGAATGGGTGTTTCTCCAGATCAAATATCATACAAAATGATTATTCAAGGTCTATGCATGACTGGTGATGCTATCAAAGCCAATGAATTTCTAAACTTGATGTTAGAAAAATCAATGGTGCCTGAGGCTCATATTTGGAACCTGATAATCGATTGTTATGGAAGGTATGGATATCTGAGGGATGCAATCTCCATCAGGGATCAGATGTTGGCTGCCGGTGTGCTACCAAATGTATATACTTACAATGCGTTGATTCATGCACAAGTTAAAGGGGGTAACATATTTAGTGCATATTCTCTGAAAAAGGATATGCTTTTGTTAGGTCTTTTTCCAGACGTTGTGACTTACAATTTATTGATACATGGTGCTTGTAAGTGTGGACAAATTCGTTTTGCCCTTCAATTATATGATGAAATGCTTAGAAAGGGATATGAACCGGATAAGATAACATACACAGAACTAATAAGAGGCCACTGTATGTGTGGTGACATGAAGGAGGCAGAAGACCTATTTATTGAGCTACATAGATCTGGGTTGCCAATGGATATTGTTCCATTTAAAGTTATTTTTGAGAAGTACCATAGAATAGGAGAGCCTGACATGGCATTGAAATTTTATCAAAGGTGGTTCACAATGATGGCTTGGGGAGCTAGGACAGAATAA

mRNA sequence

ATGGCTGCCTCGGCTACCTCCGTTGCACTTTTGCCCGCAAAATTTGTATGCAGGGGACGCGTTGAGCCGTCGAAATCGAAGTTTCTTGCTCCAAGCTCAAAATCGTCAATTCCATGTCATTCCGTTTCAATTTCGTCTCGGTTCCATCGGCGCAAGCCATTCAGAATTCAGGCGTCGGTTTCGATATCGGATCCTCAAGTTCGAACGGGTCCTGATGATCTCGTTGCGTCCATCCTCTCAAAGGTGACAGGAAGTGATAGAGGAGTTTTACTAACTGAAGAAAAACATAAAGAGGTTGCTGAAGTGGCTCAAGAATTGCAAAAATATTGTGTAAACGAACCTGTTAAATGTCCTCTCATATTTGGAGATTGGGATGTTGTGTATTGCTCTGTACCAACATCGCCTGGGGGTGGATACAGAAGTGCAGTGGGTCGCATTTTTTTCAAGACAAAGGAAATGATTCAGGTTGTGGAAGCTCCTGATACTGTCAAAAATAAGGTGTCCTTTTCTGCTCTTGGTTTCCTAGATGGACAGGTCTCTTTGACAGGTAAATTGAAGGCTCTAGATGATAAATGGATTCAAGTTGTGTTCGAGTCTCCTGAACTGAAAGTTGGAGGATTAGAGTTTCGATATGGTGGCGAAAGTGAGTTAGCAATTGAATCGCCACCGTCCCAGAATCTTGTGCTTGGATTTCTGAACGGAGCCCTTAACTCCCTCAAGCGTGATATTTCTCGGATGTTCGCTGTCCTTTACGGCCGACCTAACATTGATGAAGTGGCGAGGTCTAACGAGGATGAGGATTCATTGCATCCTGCTCTTAAAAGTTTAATGACAACTGTCGGTGACCATTGCGATTTGAGATCTTCGGATTGCTTTTCAGAAAAGCGTAATTTTGATGGCGAAGGAGATCCGCCGGCTGTTTTCAACGTGTTGGACGCTCTGCTCAAGGGTAGTCTGGACCGTTTGAAAGCTATGAGGGAAAGCATATGTTTGGCGAAGTCAGGTCTTCAGAAATGTTTTTTGGAGGCTGTTCCGCAACCTGACTACACAGTCATGGTTAGGGATTTGTGTTTAAAAGGAAAGTTAGGAGCAGCCCTTCTGCTTCGGAGAAAGTTGATGAGAGAAGGTTTTGTTGTTGATTTACTCACACATAATTATCTTCTTAATGGACTGTGTATAAACTGTGATATGGAGATGGCAGATTCTCTTTTTAGGGAAATGTTAGAAAGTGGTCCTTCTCCCAGTTGTGCCACATACAACATTATTATTAAGGGTTTCTGCCTTCATATGAATATGGATAAAGCTCTTGACCTATTTTATACTATGGCTAATAGTGGTATTAGACCAAGTAGAATTACCTATAATATACTTTTACATGCATTGTGCAAAAGAGGCATCTTGGAGGATGCTAGGAAGCTTCTTGAAAATATCCTAGATGATGATATTAAAACAACAGATGATGCAATCAGATCAACTATACTAATGGATGGTTATTTTAAAGGTGGAGATATGATTCAGGCTGTTGCTTTATGGGATGAGATGGTTGAAAAGAAGACGGAGATTGATGCTGTTGCATACAATGTCCTTATTCACGGGCTTTGTTTGAATCAAGACAAGAAAATTGCACTTGGCTATGTTGTTGATATGCTTAAGAGGGGTTTTCTTCCCGACATCTTTACATACAACACTCTAATCAGTGATCTTTGTAAAGAGGGCCAATTTGGTGAGGCTTACTATATCCATGATGTCATGTCAAGAATGGGTGTTTCTCCAGATCAAATATCATACAAAATGATTATTCAAGGTCTATGCATGACTGGTGATGCTATCAAAGCCAATGAATTTCTAAACTTGATGTTAGAAAAATCAATGGTGCCTGAGGCTCATATTTGGAACCTGATAATCGATTGTTATGGAAGGTATGGATATCTGAGGGATGCAATCTCCATCAGGGATCAGATGTTGGCTGCCGGTGTGCTACCAAATGTATATACTTACAATGCGTTGATTCATGCACAAGTTAAAGGGGGTAACATATTTAGTGCATATTCTCTGAAAAAGGATATGCTTTTGTTAGGTCTTTTTCCAGACGTTGTGACTTACAATTTATTGATACATGGTGCTTGTAAGTGTGGACAAATTCGTTTTGCCCTTCAATTATATGATGAAATGCTTAGAAAGGGATATGAACCGGATAAGATAACATACACAGAACTAATAAGAGGCCACTGTATGTGTGGTGACATGAAGGAGGCAGAAGACCTATTTATTGAGCTACATAGATCTGGGTTGCCAATGGATATTGTTCCATTTAAAGTTATTTTTGAGAAGTACCATAGAATAGGAGAGCCTGACATGGCATTGAAATTTTATCAAAGGTGGTTCACAATGATGGCTTGGGGAGCTAGGACAGAATAA

Coding sequence (CDS)

ATGGCTGCCTCGGCTACCTCCGTTGCACTTTTGCCCGCAAAATTTGTATGCAGGGGACGCGTTGAGCCGTCGAAATCGAAGTTTCTTGCTCCAAGCTCAAAATCGTCAATTCCATGTCATTCCGTTTCAATTTCGTCTCGGTTCCATCGGCGCAAGCCATTCAGAATTCAGGCGTCGGTTTCGATATCGGATCCTCAAGTTCGAACGGGTCCTGATGATCTCGTTGCGTCCATCCTCTCAAAGGTGACAGGAAGTGATAGAGGAGTTTTACTAACTGAAGAAAAACATAAAGAGGTTGCTGAAGTGGCTCAAGAATTGCAAAAATATTGTGTAAACGAACCTGTTAAATGTCCTCTCATATTTGGAGATTGGGATGTTGTGTATTGCTCTGTACCAACATCGCCTGGGGGTGGATACAGAAGTGCAGTGGGTCGCATTTTTTTCAAGACAAAGGAAATGATTCAGGTTGTGGAAGCTCCTGATACTGTCAAAAATAAGGTGTCCTTTTCTGCTCTTGGTTTCCTAGATGGACAGGTCTCTTTGACAGGTAAATTGAAGGCTCTAGATGATAAATGGATTCAAGTTGTGTTCGAGTCTCCTGAACTGAAAGTTGGAGGATTAGAGTTTCGATATGGTGGCGAAAGTGAGTTAGCAATTGAATCGCCACCGTCCCAGAATCTTGTGCTTGGATTTCTGAACGGAGCCCTTAACTCCCTCAAGCGTGATATTTCTCGGATGTTCGCTGTCCTTTACGGCCGACCTAACATTGATGAAGTGGCGAGGTCTAACGAGGATGAGGATTCATTGCATCCTGCTCTTAAAAGTTTAATGACAACTGTCGGTGACCATTGCGATTTGAGATCTTCGGATTGCTTTTCAGAAAAGCGTAATTTTGATGGCGAAGGAGATCCGCCGGCTGTTTTCAACGTGTTGGACGCTCTGCTCAAGGGTAGTCTGGACCGTTTGAAAGCTATGAGGGAAAGCATATGTTTGGCGAAGTCAGGTCTTCAGAAATGTTTTTTGGAGGCTGTTCCGCAACCTGACTACACAGTCATGGTTAGGGATTTGTGTTTAAAAGGAAAGTTAGGAGCAGCCCTTCTGCTTCGGAGAAAGTTGATGAGAGAAGGTTTTGTTGTTGATTTACTCACACATAATTATCTTCTTAATGGACTGTGTATAAACTGTGATATGGAGATGGCAGATTCTCTTTTTAGGGAAATGTTAGAAAGTGGTCCTTCTCCCAGTTGTGCCACATACAACATTATTATTAAGGGTTTCTGCCTTCATATGAATATGGATAAAGCTCTTGACCTATTTTATACTATGGCTAATAGTGGTATTAGACCAAGTAGAATTACCTATAATATACTTTTACATGCATTGTGCAAAAGAGGCATCTTGGAGGATGCTAGGAAGCTTCTTGAAAATATCCTAGATGATGATATTAAAACAACAGATGATGCAATCAGATCAACTATACTAATGGATGGTTATTTTAAAGGTGGAGATATGATTCAGGCTGTTGCTTTATGGGATGAGATGGTTGAAAAGAAGACGGAGATTGATGCTGTTGCATACAATGTCCTTATTCACGGGCTTTGTTTGAATCAAGACAAGAAAATTGCACTTGGCTATGTTGTTGATATGCTTAAGAGGGGTTTTCTTCCCGACATCTTTACATACAACACTCTAATCAGTGATCTTTGTAAAGAGGGCCAATTTGGTGAGGCTTACTATATCCATGATGTCATGTCAAGAATGGGTGTTTCTCCAGATCAAATATCATACAAAATGATTATTCAAGGTCTATGCATGACTGGTGATGCTATCAAAGCCAATGAATTTCTAAACTTGATGTTAGAAAAATCAATGGTGCCTGAGGCTCATATTTGGAACCTGATAATCGATTGTTATGGAAGGTATGGATATCTGAGGGATGCAATCTCCATCAGGGATCAGATGTTGGCTGCCGGTGTGCTACCAAATGTATATACTTACAATGCGTTGATTCATGCACAAGTTAAAGGGGGTAACATATTTAGTGCATATTCTCTGAAAAAGGATATGCTTTTGTTAGGTCTTTTTCCAGACGTTGTGACTTACAATTTATTGATACATGGTGCTTGTAAGTGTGGACAAATTCGTTTTGCCCTTCAATTATATGATGAAATGCTTAGAAAGGGATATGAACCGGATAAGATAACATACACAGAACTAATAAGAGGCCACTGTATGTGTGGTGACATGAAGGAGGCAGAAGACCTATTTATTGAGCTACATAGATCTGGGTTGCCAATGGATATTGTTCCATTTAAAGTTATTTTTGAGAAGTACCATAGAATAGGAGAGCCTGACATGGCATTGAAATTTTATCAAAGGTGGTTCACAATGATGGCTTGGGGAGCTAGGACAGAATAA

Protein sequence

MAASATSVALLPAKFVCRGRVEPSKSKFLAPSSKSSIPCHSVSISSRFHRRKPFRIQASVSISDPQVRTGPDDLVASILSKVTGSDRGVLLTEEKHKEVAEVAQELQKYCVNEPVKCPLIFGDWDVVYCSVPTSPGGGYRSAVGRIFFKTKEMIQVVEAPDTVKNKVSFSALGFLDGQVSLTGKLKALDDKWIQVVFESPELKVGGLEFRYGGESELAIESPPSQNLVLGFLNGALNSLKRDISRMFAVLYGRPNIDEVARSNEDEDSLHPALKSLMTTVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGLQKCFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRWFTMMAWGARTE
BLAST of Cla022268 vs. Swiss-Prot
Match: PP396_ARATH (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 8.7e-145
Identity = 272/577 (47.14%), Postives = 374/577 (64.82%), Query Frame = 1

Query: 220 ESPPSQNLVLGFLNGALNSLKRDISRMFAVLYGRPNIDEVARSNEDEDSLHPALKSLMTT 279
           E   SQ  V   LN +L+ +  ++SR+ A ++      E+  S          ++   + 
Sbjct: 9   EVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDFEMRLS---------CIERPPSI 68

Query: 280 VGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGLQKC 339
            G+H  L +   FS+++++D + DP A+FNVLD +LK SLDRL ++RES+C  KS     
Sbjct: 69  SGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDD 128

Query: 340 FLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEM 399
            L       ++ ++RDLCL+GKL AAL LR+K++  G +  L+THN+LLNGLC    +E 
Sbjct: 129 CLSI-----HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEK 188

Query: 400 ADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLH 459
           AD L REM E GPSP+C +YN +IKG C   N+DKAL LF TM   GIRP+R+T NI++H
Sbjct: 189 ADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVH 248

Query: 460 ALCKRGIL-EDARKLLENILDDDIKTTD-DAIRSTILMDGYFKGGDMIQAVALWDEMVEK 519
           ALC++G++  + +KLLE ILD        D +  TILMD  FK G+++QA+ +W EM +K
Sbjct: 249 ALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK 308

Query: 520 KTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEA 579
               D+V YNV+I GLC + +   A G++ DM+KRG  PD+FTYNTLIS LCKEG+F EA
Sbjct: 309 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 368

Query: 580 YYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDC 639
             +H  M   GV+PDQISYK+IIQGLC+ GD  +ANEFL  ML+ S++PE  +WN++ID 
Sbjct: 369 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 428

Query: 640 YGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPD 699
           YGRYG    A+S+ + ML+ GV PNVYT NALIH  VKGG +  A+ +K +M    + PD
Sbjct: 429 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 488

Query: 700 VVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFI 759
             TYNLL+  AC  G +R A QLYDEMLR+G +PD ITYTEL+RG C  G +K+AE L  
Sbjct: 489 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 548

Query: 760 ELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRW 795
            +  +G+ +D VPF ++ +KY R+  P  A   Y++W
Sbjct: 549 RIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKW 571

BLAST of Cla022268 vs. Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 1.1e-59
Identity = 133/431 (30.86%), Postives = 215/431 (49.88%), Query Frame = 1

Query: 349 YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREML 408
           +  ++  L L  K   A+ L  +++ +G   DL+T+  ++NGLC   D ++A +L  +M 
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248

Query: 409 ESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILE 468
           +    P    YN II G C + +MD AL+LF  M   GIRP+ +TY+ L+  LC  G   
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308

Query: 469 DARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNV 528
           DA +LL ++++   K   D    + L+D + K G +++A  L+DEMV++  +   V Y+ 
Sbjct: 309 DASRLLSDMIER--KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 368

Query: 529 LIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMG 588
           LI+G C++     A      M+ +   PD+ TYNTLI   CK  +  E   +   MS+ G
Sbjct: 369 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 428

Query: 589 VSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAI 648
           +  + ++Y ++IQGL   GD   A E    M+   + P    +N ++D   + G L  A+
Sbjct: 429 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 488

Query: 649 SIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGA 708
            + + +  + + P +YTYN +I    K G +   + L  ++ L G+ PDVV YN +I G 
Sbjct: 489 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 548

Query: 709 CKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDI 768
           C+ G    A  L+ EM   G  P+   Y  LIR     GD + + +L  E+   G   D 
Sbjct: 549 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608

Query: 769 VPFKVIFEKYH 780
               ++    H
Sbjct: 609 STIGLVTNMLH 617


HSP 2 Score: 221.9 bits (564), Expect = 2.6e-56
Identity = 128/439 (29.16%), Postives = 222/439 (50.57%), Query Frame = 1

Query: 349 YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREML 408
           Y++++   C + +L  AL +  K+M+ G+  +++T + LLNG C +  +  A +L  +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 409 ESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILE 468
            +G  P+  T+N +I G  LH    +A+ L   M   G +P  +TY ++++ LCKRG  +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 469 DARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNV 528
            A  LL  +  +  K     +    ++DG  K   M  A+ L+ EM  K    + V Y+ 
Sbjct: 239 LAFNLLNKM--EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 298

Query: 529 LIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMG 588
           LI  LC       A   + DM++R   PD+FT++ LI    KEG+  EA  ++D M +  
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 358

Query: 589 VSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAI 648
           + P  ++Y  +I G CM     +A +    M+ K   P+   +N +I  + +Y  + + +
Sbjct: 359 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 418

Query: 649 SIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGA 708
            +  +M   G++ N  TYN LI    + G+   A  + K+M+  G+ P+++TYN L+ G 
Sbjct: 419 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 478

Query: 709 CKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDI 768
           CK G++  A+ +++ + R   EP   TY  +I G C  G +++  DLF  L   G+  D+
Sbjct: 479 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 538

Query: 769 VPFKVIFEKYHRIGEPDMA 788
           V +  +   + R G  + A
Sbjct: 539 VAYNTMISGFCRKGSKEEA 555


HSP 3 Score: 189.9 bits (481), Expect = 1.1e-46
Identity = 118/404 (29.21%), Postives = 203/404 (50.25%), Query Frame = 1

Query: 389 NGLCINCDMEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIR 448
           NGL     ++ A +LF EM++S P PS   ++ ++         D  + L   M N GI 
Sbjct: 55  NGLS-ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 114

Query: 449 PSRITYNILLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAV 508
            +  TY+IL++  C+R  L  A  +L  ++   +    + +  + L++GY     + +AV
Sbjct: 115 HNHYTYSILINCFCRRSQLPLALAVLGKMMK--LGYEPNIVTLSSLLNGYCHSKRISEAV 174

Query: 509 ALWDEMVEKKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDL 568
           AL D+M     + + V +N LIHGL L+     A+  +  M+ +G  PD+ TY  +++ L
Sbjct: 175 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 234

Query: 569 CKEGQFGEAYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEA 628
           CK G    A+ + + M +  + P  + Y  II GLC       A      M  K + P  
Sbjct: 235 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 294

Query: 629 HIWNLIIDCYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKD 688
             ++ +I C   YG   DA  +   M+   + P+V+T++ALI A VK G +  A  L  +
Sbjct: 295 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 354

Query: 689 MLLLGLFPDVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGD 748
           M+   + P +VTY+ LI+G C   ++  A Q+++ M+ K   PD +TY  LI+G C    
Sbjct: 355 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 414

Query: 749 MKEAEDLFIELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQ 793
           ++E  ++F E+ + GL  + V + ++ +   + G+ DMA + ++
Sbjct: 415 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455


HSP 4 Score: 139.4 bits (350), Expect = 1.7e-31
Identity = 97/372 (26.08%), Postives = 170/372 (45.70%), Query Frame = 1

Query: 302 GDPPAVFNVLDALLKGSLD--------------RLKAMRESICLAKSGLQKCFLEAVPQP 361
           GD    FN+L+ + +G L+              + K M +++ L K    K     V   
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT- 294

Query: 362 DYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREM 421
            Y+ ++  LC  G+   A  L   ++      D+ T + L++       +  A+ L+ EM
Sbjct: 295 -YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 354

Query: 422 LESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGIL 481
           ++    PS  TY+ +I GFC+H  +D+A  +F  M +    P  +TYN L+   CK   +
Sbjct: 355 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 414

Query: 482 EDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYN 541
           E+  ++   +    +    + +   IL+ G F+ GD   A  ++ EMV      + + YN
Sbjct: 415 EEGMEVFREMSQRGL--VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 474

Query: 542 VLIHGLCLNQDKKIALGYVVDMLKRGFL-PDIFTYNTLISDLCKEGQFGEAYYIHDVMSR 601
            L+ GLC N   + A+  V + L+R  + P I+TYN +I  +CK G+  + + +   +S 
Sbjct: 475 TLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 534

Query: 602 MGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRD 659
            GV PD ++Y  +I G C  G   +A+     M E   +P +  +N +I    R G    
Sbjct: 535 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 594


HSP 5 Score: 57.0 bits (136), Expect = 1.1e-06
Identity = 47/182 (25.82%), Postives = 81/182 (44.51%), Query Frame = 1

Query: 284 CDLRSSDCFSEKRNFDGEGDPPAVFN---VLDALLK-GSLDRLKAMRESICLAKSGLQKC 343
           CD+ + + F E  +   +G PP +     +LD L K G L++   + E        LQ+ 
Sbjct: 447 CDM-AQEIFKEMVS---DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY-------LQRS 506

Query: 344 FLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEM 403
            +E      Y +M+  +C  GK+     L   L  +G   D++ +N +++G C     E 
Sbjct: 507 KMEPTIYT-YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 566

Query: 404 ADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLH 462
           AD+LF+EM E G  P+   YN +I+      + + + +L   M + G      T  ++ +
Sbjct: 567 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616

BLAST of Cla022268 vs. Swiss-Prot
Match: PP376_ARATH (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.3e-59
Identity = 136/431 (31.55%), Postives = 214/431 (49.65%), Query Frame = 1

Query: 362 LGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREMLESGPSPSCATYNI 421
           +G  L L  ++  +     +  +N L++GLC    M  A+ LF EML     PS  TYN 
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254

Query: 422 IIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILEDARKLLENILDDD 481
           +I G+C   N +K+  +   M    I PS IT+N LL  L K G++EDA  +L+ +   D
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM--KD 314

Query: 482 IKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNVLIHGLCLNQDKKI 541
           +    DA   +IL DGY        A+ +++  V+   +++A   ++L++ LC     + 
Sbjct: 315 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 374

Query: 542 ALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMGVSPDQISYKMIIQ 601
           A   +   + +G +P+   YNT+I   C++G    A    + M + G+ PD ++Y  +I+
Sbjct: 375 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 434

Query: 602 GLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAISIRDQMLAAGVLP 661
             C  G+   A + +N M  K + P    +N++I  YGR         I  +M   G +P
Sbjct: 435 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 494

Query: 662 NVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGACKCGQIRFALQLY 721
           NV +Y  LI+   KG  +  A  +K+DM   G+ P V  YN+LI G C  G+I  A +  
Sbjct: 495 NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 554

Query: 722 DEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDIVPFKVIFEKYHRI 781
            EML+KG E + +TY  LI G  M G + EAEDL +E+ R GL  D+  +  +   Y   
Sbjct: 555 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 614

Query: 782 GEPDMALKFYQ 793
           G     +  Y+
Sbjct: 615 GNVQRCIALYE 623


HSP 2 Score: 185.3 bits (469), Expect = 2.7e-45
Identity = 123/412 (29.85%), Postives = 201/412 (48.79%), Query Frame = 1

Query: 349 YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREML 408
           Y  M+   C KG L  A +    + ++G   D L +N L+   C   +ME A+    +M 
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451

Query: 409 ESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILE 468
             G SPS  TYNI+I G+      DK  D+   M ++G  P+ ++Y  L++ LCK   L 
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511

Query: 469 DARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNV 528
           +A+ +  ++ D  +          +L+DG    G +  A     EM++K  E++ V YN 
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYN--MLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 571

Query: 529 LIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMG 588
           LI GL +      A   ++++ ++G  PD+FTYN+LIS     G       +++ M R G
Sbjct: 572 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 631

Query: 589 VSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAI 648
           + P   +Y ++I  LC T + I+  E   L  E S+ P+  ++N ++ CY  +G +  A 
Sbjct: 632 IKPTLKTYHLLIS-LC-TKEGIELTE--RLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAF 691

Query: 649 SIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGA 708
           +++ QM+   +  +  TYN+LI  Q+K G +    SL  +M    + P+  TYN+++ G 
Sbjct: 692 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGH 751

Query: 709 CKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELH 761
           C+      A   Y EM  KG+  D     EL+ G       KEAE +  E++
Sbjct: 752 CEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797


HSP 3 Score: 184.5 bits (467), Expect = 4.6e-45
Identity = 139/488 (28.48%), Postives = 235/488 (48.16%), Query Frame = 1

Query: 307 VFNVL-DALLKGSLDRLKAMRESICLAKSGLQKCFLEAVPQPDYTVMVRDLCLKGKLGAA 366
           ++NVL D L KG     K M ++  L    L +  L ++    Y  ++   C  G    +
Sbjct: 216 IYNVLIDGLCKG-----KRMNDAEQLFDEMLARRLLPSLIT--YNTLIDGYCKAGNPEKS 275

Query: 367 LLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREMLESGPSPSCATYNIIIKG 426
             +R ++  +     L+T N LL GL     +E A+++ +EM + G  P   T++I+  G
Sbjct: 276 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 335

Query: 427 FCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILEDARKLLENILDDDIKTT 486
           +  +   + AL ++ T  +SG++ +  T +ILL+ALCK G +E A ++L   +   +   
Sbjct: 336 YSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL-VP 395

Query: 487 DDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNVLIHGLCLNQDKKIALGY 546
           ++ I +T ++DGY + GD++ A    + M ++  + D +AYN LI   C   + + A   
Sbjct: 396 NEVIYNT-MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 455

Query: 547 VVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMGVSPDQISYKMIIQGLCM 606
           V  M  +G  P + TYN LI    ++ +F + + I   M   G  P+ +SY  +I  LC 
Sbjct: 456 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 515

Query: 607 TGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAISIRDQMLAAGVLPNVYT 666
               ++A      M ++ + P+  I+N++ID     G + DA     +ML  G+  N+ T
Sbjct: 516 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 575

Query: 667 YNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGACKCGQIRFALQLYDEML 726
           YN LI      G +  A  L  ++   GL PDV TYN LI G    G ++  + LY+EM 
Sbjct: 576 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 635

Query: 727 RKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDIVPFKVIFEKYHRIGEPD 786
           R G +P   TY  L+   C    ++  E LF E+    L  D++ +  +   Y   G+ +
Sbjct: 636 RSGIKPTLKTY-HLLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDME 690

Query: 787 MALKFYQR 794
            A    ++
Sbjct: 696 KAFNLQKQ 690


HSP 4 Score: 164.9 bits (416), Expect = 3.8e-39
Identity = 116/440 (26.36%), Postives = 202/440 (45.91%), Query Frame = 1

Query: 361 KLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREMLESGPSPSCATYN 420
           K  AAL +    +  G  ++  T + LLN LC    +E A+ +    +  G  P+   YN
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393

Query: 421 IIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILEDARKLLENILDD 480
            +I G+C   ++  A      M   G++P  + YN L+   C+ G +E+A K +  +   
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM--- 453

Query: 481 DIKTTDDAIRS-TILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNVLIHGLCLNQDK 540
            +K    ++ +  IL+ GY +  +  +   +  EM +  T  + V+Y  LI+ LC  +  
Sbjct: 454 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC--KGS 513

Query: 541 KIALGYVV--DMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMGVSPDQISYK 600
           K+    +V  DM  RG  P +  YN LI   C +G+  +A+     M + G+  + ++Y 
Sbjct: 514 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 573

Query: 601 MIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAISIRDQMLAA 660
            +I GL MTG   +A + L  +  K + P+   +N +I  YG  G ++  I++ ++M  +
Sbjct: 574 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 633

Query: 661 GVLPNVYTYNALIHAQVKGG-----NIFSAYSLKKDMLLLGLFPDVVTYNLLIHGACKCG 720
           G+ P + TY+ LI    K G      +F   SLK         PD++ YN ++H     G
Sbjct: 634 GIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK---------PDLLVYNGVLHCYAVHG 693

Query: 721 QIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDIVPFK 780
            +  A  L  +M+ K    DK TY  LI G    G + E   L  E++   +  +   + 
Sbjct: 694 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 753

Query: 781 VIFEKYHRIGEPDMALKFYQ 793
           +I + +  + +   A  +Y+
Sbjct: 754 IIVKGHCEVKDYMSAYVWYR 759


HSP 5 Score: 152.1 bits (383), Expect = 2.5e-35
Identity = 100/354 (28.25%), Postives = 162/354 (45.76%), Query Frame = 1

Query: 432 MDKALDLFYTMANSGIRPSRITYNILLHALCKRGILEDARKLLENILDDDIKTTDDAIRS 491
           + +A DLF+ + N GI PS  +  +LL  L K         +  NIL+ D + +      
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 492 TILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLK 551
            I      K  D+ + + L++ M   +       YNVLI GLC  +    A     +ML 
Sbjct: 185 AI--QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 244

Query: 552 RGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIK 611
           R  LP + TYNTLI   CK G   +++ + + M    + P  I++  +++GL   G    
Sbjct: 245 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 304

Query: 612 ANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIH 671
           A   L  M +   VP+A  ++++ D Y        A+ + +  + +GV  N YT + L++
Sbjct: 305 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 364

Query: 672 AQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEP 731
           A  K G I  A  +    +  GL P+ V YN +I G C+ G +  A    + M ++G +P
Sbjct: 365 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 424

Query: 732 DKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDIVPFKVIFEKYHRIGEPD 786
           D + Y  LIR  C  G+M+ AE    ++   G+   +  + ++   Y R  E D
Sbjct: 425 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476


HSP 6 Score: 122.1 bits (305), Expect = 2.8e-26
Identity = 91/389 (23.39%), Postives = 169/389 (43.44%), Query Frame = 1

Query: 385 NYLLNGLCINCDMEMADS--LFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTM 444
           +YLL  + +N    ++++  LF  +   G  PS  +  +++            +++F  +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170

Query: 445 ANSGIRPSRITYNILLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGG 504
             S  RPS+  Y   + A  K   +    +L   +  D I  +       +L+DG  KG 
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPS--VFIYNVLIDGLCKGK 230

Query: 505 DMIQAVALWDEMVEKKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYN 564
            M  A  L+DEM+ ++     + YN LI G C   + + +      M      P + T+N
Sbjct: 231 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 290

Query: 565 TLISDLCKEGQFGEAYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEK 624
           TL+  L K G   +A  +   M  +G  PD  ++ ++  G      A  A       ++ 
Sbjct: 291 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 350

Query: 625 SMVPEAHIWNLIIDCYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSA 684
            +   A+  +++++   + G +  A  I  + +A G++PN   YN +I    + G++  A
Sbjct: 351 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 410

Query: 685 YSLKKDMLLLGLFPDVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRG 744
               + M   G+ PD + YN LI   C+ G++  A +  ++M  KG  P   TY  LI G
Sbjct: 411 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 470

Query: 745 HCMCGDMKEAEDLFIELHRSGLPMDIVPF 772
           +    +  +  D+  E+  +G   ++V +
Sbjct: 471 YGRKYEFDKCFDILKEMEDNGTMPNVVSY 497


HSP 7 Score: 102.4 bits (254), Expect = 2.3e-20
Identity = 81/294 (27.55%), Postives = 140/294 (47.62%), Query Frame = 1

Query: 295 KRNFDGEGDPPAVFNVLDALLKGSLDRLK---AMRESICLAKSGLQKCFLEAVPQPDYTV 354
           KR+ +  G  P V  + + L+ G   + K   A R S  + K G++   +       Y  
Sbjct: 517 KRDMEDRGVSPKV-RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT------YNT 576

Query: 355 MVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREMLESG 414
           ++  L + GKL  A  L  ++ R+G   D+ T+N L++G     +++   +L+ EM  SG
Sbjct: 577 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 636

Query: 415 PSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILEDAR 474
             P+  TY+++I   C    ++    LF  M+   ++P  + YN +LH     G +E A 
Sbjct: 637 IKPTLKTYHLLIS-LCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAF 696

Query: 475 KLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNVLIH 534
            L + +++  I        S IL  G  K G + +  +L DEM  ++ E +A  YN+++ 
Sbjct: 697 NLQKQMIEKSIGLDKTTYNSLIL--GQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 756

Query: 535 GLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMS 586
           G C  +D   A  +  +M ++GFL D+   N L+S L +E +  EA  +   M+
Sbjct: 757 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797

BLAST of Cla022268 vs. Swiss-Prot
Match: PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.3e-59
Identity = 140/456 (30.70%), Postives = 239/456 (52.41%), Query Frame = 1

Query: 341 LEAVPQPD---YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDM 400
           +EA   PD   YT ++   C +  L +A  +  ++  +G   + + + +L++GLC+   +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304

Query: 401 EMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNIL 460
           + A  LF +M +    P+  TY ++IK  C      +AL+L   M  +GI+P+  TY +L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364

Query: 461 LHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEK 520
           + +LC +   E AR+LL  +L+  +    + I    L++GY K G +  AV + + M  +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMP--NVITYNALINGYCKRGMIEDAVDVVELMESR 424

Query: 521 KTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEA 580
           K   +   YN LI G C +   K A+G +  ML+R  LPD+ TYN+LI   C+ G F  A
Sbjct: 425 KLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 484

Query: 581 YYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDC 640
           Y +  +M+  G+ PDQ +Y  +I  LC +    +A +  + + +K + P   ++  +ID 
Sbjct: 485 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 544

Query: 641 YGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPD 700
           Y + G + +A  + ++ML+   LPN  T+NALIH     G +  A  L++ M+ +GL P 
Sbjct: 545 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 604

Query: 701 VVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFI 760
           V T  +LIH   K G    A   + +ML  G +PD  TYT  I+ +C  G + +AED+  
Sbjct: 605 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 664

Query: 761 ELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQR 794
           ++  +G+  D+  +  + + Y  +G+ + A    +R
Sbjct: 665 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697


HSP 2 Score: 210.7 bits (535), Expect = 6.0e-53
Identity = 155/539 (28.76%), Postives = 257/539 (47.68%), Query Frame = 1

Query: 227 LVLGFLNGALNSLKRDISRMFAVLYGRPNIDEVARSNED--EDSLHPALKSLMTTVGDHC 286
           L++G  N  LNSL R     F +      +DE+ +   +  ED + P + +    V  +C
Sbjct: 181 LIIGCYNTLLNSLAR-----FGL------VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 240

Query: 287 DLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGLQKCFLEAV 346
            L + +  ++  +   E      F    +L+ G   R           +  L+ C    V
Sbjct: 241 KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 300

Query: 347 PQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLF 406
               YT ++  LC+  ++  A+ L  K+  +     + T+  L+  LC +     A +L 
Sbjct: 301 A---YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 360

Query: 407 REMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKR 466
           +EM E+G  P+  TY ++I   C     +KA +L   M   G+ P+ ITYN L++  CKR
Sbjct: 361 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 420

Query: 467 GILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAV 526
           G++EDA  ++E  L +  K + +      L+ GY K  ++ +A+ + ++M+E+K   D V
Sbjct: 421 GMIEDAVDVVE--LMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVV 480

Query: 527 AYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVM 586
            YN LI G C + +   A   +  M  RG +PD +TY ++I  LCK  +  EA  + D +
Sbjct: 481 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 540

Query: 587 SRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYL 646
            + GV+P+ + Y  +I G C  G   +A+  L  ML K+ +P +  +N +I      G L
Sbjct: 541 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 600

Query: 647 RDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLL 706
           ++A  + ++M+  G+ P V T   LIH  +K G+   AYS  + ML  G  PD  TY   
Sbjct: 601 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 660

Query: 707 IHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSG 764
           I   C+ G++  A  +  +M   G  PD  TY+ LI+G+   G    A D+   +  +G
Sbjct: 661 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702


HSP 3 Score: 156.4 bits (394), Expect = 1.3e-36
Identity = 122/429 (28.44%), Postives = 190/429 (44.29%), Query Frame = 1

Query: 349 YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREML 408
           YTV++  LC + K   A  L  +++ +G + +++T+N L+NG C    +E A  +   M 
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420

Query: 409 ESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILE 468
               SP+  TYN +IKG+C   N+ KA+ +   M    + P  +TYN L+   C+ G  +
Sbjct: 421 SRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 480

Query: 469 DARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNV 528
            A +LL   L +D     D    T ++D   K   + +A  L+D + +K    + V Y  
Sbjct: 481 SAYRLLS--LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 540

Query: 529 LIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMG 588
           LI G C       A   +  ML +  LP+  T+N LI  LC +G+  EA  + + M ++G
Sbjct: 541 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 600

Query: 589 VSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAI 648
           + P   +  ++I  L   GD   A      ML     P+AH +   I  Y R G L DA 
Sbjct: 601 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 660

Query: 649 SIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGA 708
            +  +M   GV P+++TY++LI      G    A+ + K M   G  P   T+       
Sbjct: 661 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF------- 720

Query: 709 CKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDI 768
                    L L   +L   Y   K +  EL    C   +M E  D  +EL    +   +
Sbjct: 721 ---------LSLIKHLLEMKYGKQKGSEPEL----CAMSNMMEF-DTVVELLEKMVEHSV 765

Query: 769 VPFKVIFEK 778
            P    +EK
Sbjct: 781 TPNAKSYEK 765


HSP 4 Score: 147.5 bits (371), Expect = 6.2e-34
Identity = 122/476 (25.63%), Postives = 206/476 (43.28%), Query Frame = 1

Query: 335 GLQKCFLEAVPQPD---YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGL 394
           G+    LE    PD   Y  ++   C  G   +A  L   +   G V D  T+  +++ L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507

Query: 395 CINCDMEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSR 454
           C +  +E A  LF  + + G +P+   Y  +I G+C    +D+A  +   M +    P+ 
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567

Query: 455 ITYNILLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALW 514
           +T+N L+H LC  G L++A  L E ++   ++ T      TIL+    K GD   A + +
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT--VSTDTILIHRLLKDGDFDHAYSRF 627

Query: 515 DEMVEKKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKE 574
            +M+   T+ DA  Y   I   C       A   +  M + G  PD+FTY++LI      
Sbjct: 628 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY--- 687

Query: 575 GQFGEAYYIHDVMSRM---GVSPDQISYKMIIQ---------------GLCMTGDAIKAN 634
           G  G+  +  DV+ RM   G  P Q ++  +I+                LC   + ++ +
Sbjct: 688 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 747

Query: 635 ---EFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAISIRDQMLA-AGVLPNVYTYNAL 694
              E L  M+E S+ P A  +  +I      G LR A  + D M    G+ P+   +NAL
Sbjct: 748 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 807

Query: 695 IHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGACKCGQIRFALQLYDEMLRKGY 754
           +    K      A  +  DM+ +G  P + +  +LI G  K G+      ++  +L+ GY
Sbjct: 808 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 867

Query: 755 EPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDIVPFKVIFEKYHRIGEPD 786
             D++ +  +I G    G ++   +LF  + ++G       + ++ E     G PD
Sbjct: 868 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE-----GPPD 913


HSP 5 Score: 89.7 bits (221), Expect = 1.5e-16
Identity = 69/263 (26.24%), Postives = 116/263 (44.11%), Query Frame = 1

Query: 522 DAVAYNVLIHGLC--LNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYY 581
           D+V   + +  LC  +N+D++  L Y +          I  YNTL++ L + G   E   
Sbjct: 154 DSVGDALYVLDLCRKMNKDERFELKYKLI---------IGCYNTLLNSLARFGLVDEMKQ 213

Query: 582 IHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYG 641
           ++  M    V P+  +Y  ++ G C  G+  +AN++++ ++E  + P+   +  +I  Y 
Sbjct: 214 VYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYC 273

Query: 642 RYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVV 701
           +   L  A  + ++M   G   N   Y  LIH       I  A  L   M     FP V 
Sbjct: 274 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 333

Query: 702 TYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIEL 761
           TY +LI   C   +   AL L  EM   G +P+  TYT LI   C     ++A +L  ++
Sbjct: 334 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 393

Query: 762 HRSGLPMDIVPFKVIFEKYHRIG 783
              GL  +++ +  +   Y + G
Sbjct: 394 LEKGLMPNVITYNALINGYCKRG 407

BLAST of Cla022268 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.6e-58
Identity = 132/427 (30.91%), Postives = 224/427 (52.46%), Query Frame = 1

Query: 349 YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNG-LCINCDMEMADSLFREM 408
           + ++V+       +  AL +       GF+  +L++N +L+  +    ++  A+++F+EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 409 LESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGIL 468
           LES  SP+  TYNI+I+GFC   N+D AL LF  M   G  P+ +TYN L+   CK   +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 469 EDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYN 528
           +D  KLL ++    ++   + I   ++++G  + G M +   +  EM  +   +D V YN
Sbjct: 257 DDGFKLLRSMALKGLEP--NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 316

Query: 529 VLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRM 588
            LI G C   +   AL    +ML+ G  P + TY +LI  +CK G    A    D M   
Sbjct: 317 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 376

Query: 589 GVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDA 648
           G+ P++ +Y  ++ G    G   +A   L  M +    P    +N +I+ +   G + DA
Sbjct: 377 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 436

Query: 649 ISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHG 708
           I++ + M   G+ P+V +Y+ ++    +  ++  A  +K++M+  G+ PD +TY+ LI G
Sbjct: 437 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 496

Query: 709 ACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMD 768
            C+  + + A  LY+EMLR G  PD+ TYT LI  +CM GD+++A  L  E+   G+  D
Sbjct: 497 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 556

Query: 769 IVPFKVI 775
           +V + V+
Sbjct: 557 VVTYSVL 561


HSP 2 Score: 211.1 bits (536), Expect = 4.6e-53
Identity = 128/455 (28.13%), Postives = 228/455 (50.11%), Query Frame = 1

Query: 349 YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREML 408
           Y V++  LC +G++     +  ++ R G+ +D +T+N L+ G C   +   A  +  EML
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 409 ESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILE 468
             G +PS  TY  +I   C   NM++A++    M   G+ P+  TY  L+    ++G + 
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 469 DARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNV 528
           +A ++L  + D+    +   +    L++G+   G M  A+A+ ++M EK    D V+Y+ 
Sbjct: 398 EAYRVLREMNDNGFSPS--VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 457

Query: 529 LIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMG 588
           ++ G C + D   AL    +M+++G  PD  TY++LI   C++ +  EA  +++ M R+G
Sbjct: 458 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 517

Query: 589 VSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAI 648
           + PD+ +Y  +I   CM GD  KA +  N M+EK ++P+   ++++I+   +    R+A 
Sbjct: 518 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 577

Query: 649 SIRDQMLAAGVLPNVYTYNALIH-----------AQVKG----GNIFSAYSLKKDMLLLG 708
            +  ++     +P+  TY+ LI            + +KG    G +  A  + + ML   
Sbjct: 578 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 637

Query: 709 LFPDVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAE 768
             PD   YN++IHG C+ G IR A  LY EM++ G+    +T   L++     G + E  
Sbjct: 638 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 697

Query: 769 DLFIELHRSGLPMDIVPFKVIFEKYHRIGEPDMAL 789
            + + + RS    +    KV+ E  HR G  D+ L
Sbjct: 698 SVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730


HSP 3 Score: 208.0 bits (528), Expect = 3.9e-52
Identity = 155/566 (27.39%), Postives = 264/566 (46.64%), Query Frame = 1

Query: 215 SELAIESPPSQNLVLGFLNGA---------LNSLKRDISRMFAVLYGRPNI--DEVARSN 274
           S L ++S   Q L+L FLN A            +   I   F  LY    I  ++VA   
Sbjct: 52  SNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFK-LYKTAQILAEDVAAKT 111

Query: 275 EDEDSLHPALKSLMTTVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLK 334
            D++      KSL  T     DL    C+S    FD              L+  S  RL 
Sbjct: 112 LDDEYASLVFKSLQETY----DL----CYSTSSVFD--------------LVVKSYSRLS 171

Query: 335 AMRESICLAKSGLQKCFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLT 394
            + +++ +        F+  V   +  V+   +  K  +  A  + ++++      ++ T
Sbjct: 172 LIDKALSIVHLAQAHGFMPGVLSYN-AVLDATIRSKRNISFAENVFKEMLESQVSPNVFT 231

Query: 395 HNYLLNGLCINCDMEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMA 454
           +N L+ G C   ++++A +LF +M   G  P+  TYN +I G+C    +D    L  +MA
Sbjct: 232 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 291

Query: 455 NSGIRPSRITYNILLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGD 514
             G+ P+ I+YN++++ LC+ G +++   +L  +         D +    L+ GY K G+
Sbjct: 292 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL--DEVTYNTLIKGYCKEGN 351

Query: 515 MIQAVALWDEMVEKKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNT 574
             QA+ +  EM+        + Y  LIH +C   +   A+ ++  M  RG  P+  TY T
Sbjct: 352 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 411

Query: 575 LISDLCKEGQFGEAYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKS 634
           L+    ++G   EAY +   M+  G SP  ++Y  +I G C+TG    A   L  M EK 
Sbjct: 412 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 471

Query: 635 MVPEAHIWNLIIDCYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAY 694
           + P+   ++ ++  + R   + +A+ ++ +M+  G+ P+  TY++LI    +      A 
Sbjct: 472 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 531

Query: 695 SLKKDMLLLGLFPDVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGH 754
            L ++ML +GL PD  TY  LI+  C  G +  ALQL++EM+ KG  PD +TY+ LI G 
Sbjct: 532 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 591

Query: 755 CMCGDMKEAEDLFIEL-HRSGLPMDI 769
                 +EA+ L ++L +   +P D+
Sbjct: 592 NKQSRTREAKRLLLKLFYEESVPSDV 591


HSP 4 Score: 196.4 bits (498), Expect = 1.2e-48
Identity = 162/625 (25.92%), Postives = 269/625 (43.04%), Query Frame = 1

Query: 215 SELAIESPPSQNLVLGFLNGA---------LNSLKRDISRMFAVLYGRPNI--DEVARSN 274
           S L ++S   Q L+L FLN A            +   I   F  LY    I  ++VA   
Sbjct: 52  SNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFK-LYKTAQILAEDVAAKT 111

Query: 275 EDEDSLHPALKSLMTTVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLK------- 334
            D++      KSL  T     DL    C+S    FD      +  +++D  L        
Sbjct: 112 LDDEYASLVFKSLQETY----DL----CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQA 171

Query: 335 -----------GSLDRLKAMRESICLAKSGLQKCFLEAVPQPD---YTVMVRDLCLKGKL 394
                        LD     + +I  A++  ++  LE+   P+   Y +++R  C  G +
Sbjct: 172 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKE-MLESQVSPNVFTYNILIRGFCFAGNI 231

Query: 395 GAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREMLESGPSPSCATYNII 454
             AL L  K+  +G + +++T+N L++G C    ++    L R M   G  P+  +YN++
Sbjct: 232 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 291

Query: 455 IKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILEDARKLLENILDDDI 514
           I G C    M +   +   M   G     +TYN L+   CK G    A  +   +L   +
Sbjct: 292 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 351

Query: 515 KTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNVLIHGLCLNQDKKIA 574
             T   I  T L+    K G+M +A+   D+M  +    +   Y  L+ G         A
Sbjct: 352 --TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 411

Query: 575 LGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMGVSPDQISYKMIIQG 634
              + +M   GF P + TYN LI+  C  G+  +A  + + M   G+SPD +SY  ++ G
Sbjct: 412 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 471

Query: 635 LCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAISIRDQMLAAGVLPN 694
            C + D  +A      M+EK + P+   ++ +I  +      ++A  + ++ML  G+ P+
Sbjct: 472 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 531

Query: 695 VYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGACKCGQIRFALQLYD 754
            +TY ALI+A    G++  A  L  +M+  G+ PDVVTY++LI+G  K  + R A +L  
Sbjct: 532 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 591

Query: 755 EMLRKGYEPDKITY---------------TELIRGHCMCGDMKEAEDLFIELHRSGLPMD 793
           ++  +   P  +TY                 LI+G CM G M EA+ +F  +       D
Sbjct: 592 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 651


HSP 5 Score: 177.2 bits (448), Expect = 7.3e-43
Identity = 130/509 (25.54%), Postives = 232/509 (45.58%), Query Frame = 1

Query: 271 PALKSLMTTVGDHCDLRS-SDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESI 330
           P + +  T +  +C LR   D F   R+   +G  P + +  + ++ G     +    S 
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY-NVVINGLCREGRMKEVSF 297

Query: 331 CLAKSGLQKCFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLN 390
            L +   +   L+ V    Y  +++  C +G    AL++  +++R G    ++T+  L++
Sbjct: 298 VLTEMNRRGYSLDEVT---YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 357

Query: 391 GLCINCDMEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRP 450
            +C   +M  A     +M   G  P+  TY  ++ GF     M++A  +   M ++G  P
Sbjct: 358 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 417

Query: 451 SRITYNILLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVA 510
           S +TYN L++  C  G +EDA  +LE++ +  +  + D +  + ++ G+ +  D+ +A+ 
Sbjct: 418 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL--SPDVVSYSTVLSGFCRSYDVDEALR 477

Query: 511 LWDEMVEKKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLC 570
           +  EMVEK  + D + Y+ LI G C  +  K A     +ML+ G  PD FTY  LI+  C
Sbjct: 478 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 537

Query: 571 KEGQFGEAYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANE-FLNLMLEKSMVPEA 630
            EG   +A  +H+ M   GV PD ++Y ++I GL       +A    L L  E+S+  + 
Sbjct: 538 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 597

Query: 631 HIWNLIIDC--------------YGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQV 690
               LI +C              +   G + +A  + + ML     P+   YN +IH   
Sbjct: 598 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 657

Query: 691 KGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKI 750
           + G+I  AY+L K+M+  G     VT   L+    K G++     +   +LR     +  
Sbjct: 658 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 717

Query: 751 TYTELIRGHCMCGDMKEAEDLFIELHRSG 764
               L+  +   G+M    D+  E+ + G
Sbjct: 718 QAKVLVEINHREGNMDVVLDVLAEMAKDG 740

BLAST of Cla022268 vs. TrEMBL
Match: A0A0A0LPD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379150 PE=4 SV=1)

HSP 1 Score: 1048.5 bits (2710), Expect = 4.1e-303
Identity = 520/583 (89.19%), Postives = 540/583 (92.62%), Query Frame = 1

Query: 217 LAIESPPSQNLVLGFLNGALNSLKRDISRMFAVLYGRPNIDEVARSNEDEDSLHPALKSL 276
           LAIES PSQ LVLGFL+GALNSLKRDISRMFAV YGRP+IDE ARSNEDEDSLHPALKSL
Sbjct: 5   LAIESAPSQILVLGFLHGALNSLKRDISRMFAVFYGRPDIDEAARSNEDEDSLHPALKSL 64

Query: 277 MTTVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGL 336
           MTTVGDHCDLRSSDCFSEKRNF+GEGDP AVFNVLDALLKGSLDRLK MRESICLAKSGL
Sbjct: 65  MTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLAKSGL 124

Query: 337 QKCFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCD 396
           QKC LEA  QPDYTVMVRDLCLKGK GAALLLRRKL++EGF VDL+THNYLLNGLCINCD
Sbjct: 125 QKCVLEATQQPDYTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCD 184

Query: 397 MEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNI 456
           MEMADSLFREMLE GPSP+CATYNIIIKGFCL MNMDKALDLFYTM NSGIRPSRITYNI
Sbjct: 185 MEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNI 244

Query: 457 LLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVE 516
           LLHALCKRGIL DARKLLE IL DDIKTTDDAI STILMD  FK GD IQAVALWD+MVE
Sbjct: 245 LLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVE 304

Query: 517 KKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGE 576
           KKTEID VAYNVLIHGLCLNQDKKIALGYV DMLKRGFLPDIFTYNTLIS  CKEGQFG+
Sbjct: 305 KKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFGD 364

Query: 577 AYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIID 636
           AYYIHDVMSRMGVSPDQI YKMIIQ LCM GDAIKA+EFL+ MLEKSMVPE HIWNLIID
Sbjct: 365 AYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPEPHIWNLIID 424

Query: 637 CYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFP 696
           CYGRYGYL +AIS RDQML AGV PNV+TYNALIHAQV+GGNIFSAYSLKK+MLLLGLFP
Sbjct: 425 CYGRYGYLSNAISKRDQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFP 484

Query: 697 DVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLF 756
           DVVTYNLLI+GACK GQ+RFALQLYDEMLRKGYE DKITYTELI GHCMCG+MKEAEDLF
Sbjct: 485 DVVTYNLLINGACKHGQLRFALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLF 544

Query: 757 IELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRWFTMMA 800
            ELHRSGLPMDIVPFKVIFEKY +IGEPDMALKFY+RW   MA
Sbjct: 545 FELHRSGLPMDIVPFKVIFEKYQKIGEPDMALKFYRRWLARMA 587

BLAST of Cla022268 vs. TrEMBL
Match: B9SPQ9_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0204990 PE=4 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 4.0e-173
Identity = 322/558 (57.71%), Postives = 413/558 (74.01%), Query Frame = 1

Query: 221 SPPSQNLVLGFLNGALNSLKRDISRMFAVLYGRPNIDEVARSNEDEDSLHPALKSLMTTV 280
           S  S   +L  L+ A++++K   +++FA ++ R +I +   S   +D        ++ T+
Sbjct: 12  SASSHIFLLRLLDRAMDTIKHHTAQIFANIFCRESIIDPNASYFFDD--------MVKTL 71

Query: 281 GDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLA--KSGLQK 340
            + C LR      + +N + E DP  VFNVLDA+LKGSL+RLK+MRESI ++  K GL  
Sbjct: 72  SNRCRLRR-----DNKNLNDEDDPQVVFNVLDAMLKGSLERLKSMRESIGISSVKVGLAG 131

Query: 341 CFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDME 400
             ++ V    +  +VRDLCL GKLGAAL LRRKL+ +GFV D+LTHN+L+NGLC + D++
Sbjct: 132 RSVD-VSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQ 191

Query: 401 MADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILL 460
            AD L +EMLE GPSP+CAT+N  IKG+CL  N+DKAL LF +M++SG++P+R+T NIL+
Sbjct: 192 KADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILV 251

Query: 461 HALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKK 520
           HALCKRG+LEDA+KLL  +LDD+ K   + I STILMDG  K GDM+QA+ +W  M +  
Sbjct: 252 HALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNN 311

Query: 521 TEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAY 580
           T +D+VAYNVLIHG CL ++ K+A  Y  DMLKRG LPDIFTYNTLIS LCK G+  EA 
Sbjct: 312 TLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEAC 371

Query: 581 YIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCY 640
           YIHDVM RMGV+PDQISYK++IQGLC  GD +KANE L+ MLEKSMVPEAH+WNLIID +
Sbjct: 372 YIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGF 431

Query: 641 GRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDV 700
            R G   +A SIRDQML+ GV+PNV+TYNALIHAQVK GNI  AYSLKK ML  GLFPDV
Sbjct: 432 ARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDV 491

Query: 701 VTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIE 760
           +TYNLLI  AC  G+I  A+QLY EMLR G+EPD ITYTELIRG CM G+MKEA++LF +
Sbjct: 492 ITYNLLIGTACNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMRGNMKEAKELFAK 551

Query: 761 LHRSGLPMDIVPFKVIFE 777
           L  +GL +D VPF+++ +
Sbjct: 552 LQNTGLTVDHVPFQLLIK 555

BLAST of Cla022268 vs. TrEMBL
Match: B9SPQ9_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0204990 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.6e-02
Identity = 26/88 (29.55%), Postives = 44/88 (50.00%), Query Frame = 1

Query: 704 LIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSG 763
           L+   C  G++  AL L  ++L KG+ PD +T+  L+ G C  GD+++A+ L  E+   G
Sbjct: 131 LVRDLCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIG 190

Query: 764 LPMDIVPFKVIFEKYHRIGEPDMALKFY 792
              +   F    + Y  +   D AL  +
Sbjct: 191 PSPNCATFNTFIKGYCLLNNVDKALYLF 218


HSP 2 Score: 48.5 bits (114), Expect = 4.4e-02
Identity = 25/97 (25.77%), Postives = 52/97 (53.61%), Query Frame = 1

Query: 349 YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREML 408
           Y +++   C  G++  A+ L  +++R G   D++T+  L+ GLC+  +M+ A  LF ++ 
Sbjct: 480 YNLLIGTACNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMRGNMKEAKELFAKLQ 539

Query: 409 ESGPSPSCATYNIIIK---GFCLHMNMDKALDLFYTM 443
            +G +     + ++IK      L +  ++AL L Y +
Sbjct: 540 NTGLTVDHVPFQLLIKNTFNLLLTLARNRALGLSYLL 576


HSP 3 Score: 613.6 bits (1581), Expect = 3.4e-172
Identity = 303/505 (60.00%), Postives = 382/505 (75.64%), Query Frame = 1

Query: 290 DCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGLQKCFLEAVPQPDY 349
           D FS  +  DG G  P VFNVLD++LKGSLDRLK+MR+ I L K G+  C L+ V     
Sbjct: 7   DEFSNNKQGDGGGGDPLVFNVLDSMLKGSLDRLKSMRDDISLVKKGITGCALD-VNCAGN 66

Query: 350 TVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREMLE 409
             +++DLCL GKLG AL LR K++++GFV D+LTHNY++NGLC   ++E AD L REML+
Sbjct: 67  EAIIKDLCLGGKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLD 126

Query: 410 SGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILED 469
            GPSP+CATYN  IKG+CL   +DKAL LF +MANSG +P+R+T+N LLHALCK+ +L +
Sbjct: 127 KGPSPNCATYNTFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCKKDLLTE 186

Query: 470 ARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNVL 529
            +KLL  ILDDD K T + I STILMD   K GD++QA+ +WD MVE+ T +D ++YNVL
Sbjct: 187 GKKLLGEILDDDEKATSNVITSTILMDCSIKSGDIVQALGIWDSMVEEGTPMDVISYNVL 246

Query: 530 IHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIHDVMSRMGV 589
           IHG CL +D K+A  Y   MLK G LPD+FTYNTL+S LCK G+  EA YIHDVM RMGV
Sbjct: 247 IHGFCLARDMKLAYSYSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYIHDVMLRMGV 306

Query: 590 SPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDCYGRYGYLRDAIS 649
           +PD++SYK+IIQGLC+ GD  KAN +LN MLEKSM+PE  +WNLIID YGR G + +A +
Sbjct: 307 APDEVSYKLIIQGLCVCGDVDKANGYLNCMLEKSMIPEPLVWNLIIDGYGRCGDICNAFA 366

Query: 650 IRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPDVVTYNLLIHGAC 709
           IRD+ML+ GV+PNV+TYNALIHAQVK GNI  AY LKKDMLL GLFPDVVTYNLLI  A 
Sbjct: 367 IRDRMLSFGVVPNVFTYNALIHAQVKIGNILYAYFLKKDMLLKGLFPDVVTYNLLIGAAA 426

Query: 710 KCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFIELHRSGLPMDIV 769
             G I +ALQLYDEMLR G  PD ITYTELIRG+C+  + KEAE+L  +L +SGL +D V
Sbjct: 427 HAGHIHYALQLYDEMLRGGCNPDMITYTELIRGYCVKYNTKEAEELLAKLLKSGLLIDHV 486

Query: 770 PFKVIFEKYHRIGEPDMALKFYQRW 795
           PF+++ ++Y ++ EPD A + Y++W
Sbjct: 487 PFQILIKQYCKMKEPDRAFQLYRKW 510

BLAST of Cla022268 vs. TrEMBL
Match: U5FID5_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0018s04350g PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.3e-18
Identity = 91/353 (25.78%), Postives = 153/353 (43.34%), Query Frame = 1

Query: 237 NSLKRDISRMFAVLYGRPNIDEVARSNEDEDSLHPALKSLMTTVGDHCDLRSSDCFSEKR 296
           N+L   + +   +  G+  + E+   +E   S       + +T+   C ++S D      
Sbjct: 171 NTLLHALCKKDLLTEGKKLLGEILDDDEKATS-----NVITSTILMDCSIKSGDIVQALG 230

Query: 297 NFDG---EGDPPAV--FNVLDALLKGSLDRLKAMRESICLAKSGLQKCFLEAVPQPD--- 356
            +D    EG P  V  +NVL      + D   A   S  + K GL          PD   
Sbjct: 231 IWDSMVEEGTPMDVISYNVLIHGFCLARDMKLAYSYSCQMLKMGLL---------PDVFT 290

Query: 357 YTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDMEMADSLFREML 416
           Y  +V  LC  GKL  A  +   ++R G   D +++  ++ GLC+  D++ A+     ML
Sbjct: 291 YNTLVSSLCKSGKLDEACYIHDVMLRMGVAPDEVSYKLIIQGLCVCGDVDKANGYLNCML 350

Query: 417 ESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILLHALCKRGILE 476
           E    P    +N+II G+    ++  A  +   M + G+ P+  TYN L+HA  K G + 
Sbjct: 351 EKSMIPEPLVWNLIIDGYGRCGDICNAFAIRDRMLSFGVVPNVFTYNALIHAQVKIGNIL 410

Query: 477 DARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEKKTEIDAVAYNV 536
            A  L +++L   +    D +   +L+      G +  A+ L+DEM+      D + Y  
Sbjct: 411 YAYFLKKDMLLKGL--FPDVVTYNLLIGAAAHAGHIHYALQLYDEMLRGGCNPDMITYTE 470

Query: 537 LIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEAYYIH 582
           LI G C+  + K A   +  +LK G L D   +  LI   CK  +   A+ ++
Sbjct: 471 LIRGYCVKYNTKEAEELLAKLLKSGLLIDHVPFQILIKQYCKMKEPDRAFQLY 507


HSP 2 Score: 612.8 bits (1579), Expect = 5.8e-172
Identity = 308/521 (59.12%), Postives = 381/521 (73.13%), Query Frame = 1

Query: 277 MTTVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGL 336
           M  +   C LR+ D F  KR  +GEGDP  VFNVLDA+LKG+L+RLK+MRE I   K  L
Sbjct: 1   MEALSHRCQLRTQDWFQNKREDNGEGDPQFVFNVLDAMLKGNLERLKSMREGILSVKVDL 60

Query: 337 QKCFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCD 396
              ++  V    +  ++R+ CL GKLG AL LRRK+++ GFV D+LTHNYL+NGLC   +
Sbjct: 61  TG-YVADVTYVRHAAVIREFCLVGKLGTALWLRRKMVQIGFVPDVLTHNYLVNGLCKTGE 120

Query: 397 MEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNI 456
           +E AD + REMLE GPSP+CATYN  IKG+CL  ++DKAL LF TM NSGIRP+R+T NI
Sbjct: 121 LEKADWIIREMLEIGPSPNCATYNTFIKGYCLRNDVDKALFLFSTMTNSGIRPNRVTLNI 180

Query: 457 LLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVE 516
           L+HALCK G+L+DA+KLL  I+DD+     D I STILMDG  K GDM QA+ +WD + +
Sbjct: 181 LVHALCKSGLLDDAKKLLREIIDDNETARIDIITSTILMDGCIKNGDMTQALGIWDALSQ 240

Query: 517 KKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGE 576
           K   +DA++YNV+IHG CL QD K+A  Y  +MLKRG LPD+FTYNTLIS LC+ G+  E
Sbjct: 241 KN--VDAISYNVIIHGFCLIQDLKLAYSYSCEMLKRGLLPDVFTYNTLISGLCQAGKIYE 300

Query: 577 AYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIID 636
           A YIHDVM RMGV+PD ISYKM+I GLC  GD  KANE+LN ML+KSMVPE  +WNLII 
Sbjct: 301 ACYIHDVMLRMGVAPDHISYKMVIHGLCTKGDVFKANEYLNFMLKKSMVPEPFVWNLIIG 360

Query: 637 CYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFP 696
            YGR G   +A SIRDQML+ GV+PNV+TYNALIHAQVK GN+ +AY LKK+M   GLF 
Sbjct: 361 SYGRCGDPDNAFSIRDQMLSFGVVPNVFTYNALIHAQVKVGNVVAAYYLKKEMDCHGLFL 420

Query: 697 DVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLF 756
           DVVTYNLLI  AC  GQI  A + Y+EML+ G EPD ITYTELI G C  G+MKEAE+L 
Sbjct: 421 DVVTYNLLISAACNAGQISVATRFYNEMLKTGCEPDLITYTELIGGFCKSGNMKEAEELL 480

Query: 757 IELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRWFTM 798
            +L  SGL +D VPF+++ +KY  + E DMA   Y++W T+
Sbjct: 481 SKLQNSGLTVDHVPFQILIKKYCTMRETDMAFDLYKKWLTL 518

BLAST of Cla022268 vs. TrEMBL
Match: W9QZ27_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014894 PE=4 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 8.4e-171
Identity = 317/577 (54.94%), Postives = 413/577 (71.58%), Query Frame = 1

Query: 220 ESPPSQNLVLGFLNGALNSLKRDISRMFA-VLYGRPNIDEVARSNEDEDSLHPALKSLMT 279
           ES PS    L  LN  ++S+K +I+++FA + Y R N   VA ++ +E         L+ 
Sbjct: 22  ESSPSYISFLRTLNRTVDSIKDNIAQIFANIFYSRRN--NVADASFEE---------LLG 81

Query: 280 TVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGLQK 339
            +G++C L + + F +K + +GE DP AVFNVLD++LK SLD LK MRESI   K     
Sbjct: 82  KLGENCQLGAEELFPKKNDVNGEQDPQAVFNVLDSMLKESLDHLKTMRESITWPKMASLG 141

Query: 340 CFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDME 399
              +A  Q +Y  ++RDLC+ GKLG AL LRRK+MR+G ++D+ THNYL+NGLC   D+E
Sbjct: 142 WTRDANYQ-EYGTIIRDLCVDGKLGTALWLRRKMMRKGVILDIFTHNYLVNGLCKIGDLE 201

Query: 400 MADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILL 459
            AD L +EML+ GPSPSCAT+N  IKG+CL  ++DKAL LF TMANSGI P+RITYNIL+
Sbjct: 202 RADGLIKEMLQFGPSPSCATFNTFIKGYCLINDLDKALYLFSTMANSGISPNRITYNILV 261

Query: 460 HALCKRGILEDARKLLENILDDD-IKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEK 519
            ALCK+G+L D+ KLL+NIL+D+  K+  D    T LMDGYFK G+M+QA++LW ++V+ 
Sbjct: 262 QALCKKGLLVDSVKLLQNILNDENAKSKPDLHTFTTLMDGYFKNGNMLQALSLWHDVVKT 321

Query: 520 KTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEA 579
             E+D + YNVLI+GLCL+++   A GY  +M+KRG  PD+FTYN LIS LCKEG+  EA
Sbjct: 322 DAEVDVIPYNVLINGLCLSREMNAAYGYFAEMIKRGLTPDVFTYNALISCLCKEGKSEEA 381

Query: 580 YYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDC 639
            ++HDVMSR GV PDQISYK+IIQGLC+ G  ++ANE    MLEKSMVP+  IWNLII C
Sbjct: 382 SHVHDVMSRTGVVPDQISYKLIIQGLCIDGAIVRANELFRSMLEKSMVPDTQIWNLIIGC 441

Query: 640 YGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPD 699
           YGR G + +A SI DQML+ GV PNVYTYNALIHA VKGGN+  A SLK+DML LG+ PD
Sbjct: 442 YGRCGDVSEAFSIIDQMLSFGVRPNVYTYNALIHALVKGGNVADACSLKQDMLRLGVSPD 501

Query: 700 VVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFI 759
           +VTYNLLI  AC+ G + FA +L DEM R GYEPDKIT TE IRGHC+ G++ EAE LF 
Sbjct: 502 MVTYNLLIGAACRSGYLHFAAELRDEMQRTGYEPDKITCTEFIRGHCLKGNLNEAEKLFA 561

Query: 760 ELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRW 795
           +   SG P+D VP+K++ +   ++ + DMA   Y+ W
Sbjct: 562 KALDSGPPIDDVPYKILIKYCCKMKKLDMAFYLYKVW 586

BLAST of Cla022268 vs. NCBI nr
Match: gi|778672271|ref|XP_011649772.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Cucumis sativus])

HSP 1 Score: 1048.5 bits (2710), Expect = 5.9e-303
Identity = 520/583 (89.19%), Postives = 540/583 (92.62%), Query Frame = 1

Query: 217 LAIESPPSQNLVLGFLNGALNSLKRDISRMFAVLYGRPNIDEVARSNEDEDSLHPALKSL 276
           LAIES PSQ LVLGFL+GALNSLKRDISRMFAV YGRP+IDE ARSNEDEDSLHPALKSL
Sbjct: 5   LAIESAPSQILVLGFLHGALNSLKRDISRMFAVFYGRPDIDEAARSNEDEDSLHPALKSL 64

Query: 277 MTTVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGL 336
           MTTVGDHCDLRSSDCFSEKRNF+GEGDP AVFNVLDALLKGSLDRLK MRESICLAKSGL
Sbjct: 65  MTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLAKSGL 124

Query: 337 QKCFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCD 396
           QKC LEA  QPDYTVMVRDLCLKGK GAALLLRRKL++EGF VDL+THNYLLNGLCINCD
Sbjct: 125 QKCVLEATQQPDYTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCD 184

Query: 397 MEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNI 456
           MEMADSLFREMLE GPSP+CATYNIIIKGFCL MNMDKALDLFYTM NSGIRPSRITYNI
Sbjct: 185 MEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNI 244

Query: 457 LLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVE 516
           LLHALCKRGIL DARKLLE IL DDIKTTDDAI STILMD  FK GD IQAVALWD+MVE
Sbjct: 245 LLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVE 304

Query: 517 KKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGE 576
           KKTEID VAYNVLIHGLCLNQDKKIALGYV DMLKRGFLPDIFTYNTLIS  CKEGQFG+
Sbjct: 305 KKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFGD 364

Query: 577 AYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIID 636
           AYYIHDVMSRMGVSPDQI YKMIIQ LCM GDAIKA+EFL+ MLEKSMVPE HIWNLIID
Sbjct: 365 AYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPEPHIWNLIID 424

Query: 637 CYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFP 696
           CYGRYGYL +AIS RDQML AGV PNV+TYNALIHAQV+GGNIFSAYSLKK+MLLLGLFP
Sbjct: 425 CYGRYGYLSNAISKRDQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFP 484

Query: 697 DVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLF 756
           DVVTYNLLI+GACK GQ+RFALQLYDEMLRKGYE DKITYTELI GHCMCG+MKEAEDLF
Sbjct: 485 DVVTYNLLINGACKHGQLRFALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLF 544

Query: 757 IELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRWFTMMA 800
            ELHRSGLPMDIVPFKVIFEKY +IGEPDMALKFY+RW   MA
Sbjct: 545 FELHRSGLPMDIVPFKVIFEKYQKIGEPDMALKFYRRWLARMA 587

BLAST of Cla022268 vs. NCBI nr
Match: gi|659088663|ref|XP_008445100.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Cucumis melo])

HSP 1 Score: 1042.3 bits (2694), Expect = 4.3e-301
Identity = 514/583 (88.16%), Postives = 541/583 (92.80%), Query Frame = 1

Query: 217 LAIESPPSQNLVLGFLNGALNSLKRDISRMFAVLYGRPNIDEVARSNEDEDSLHPALKSL 276
           LAIES PSQ LVLGFL+GALNSLKRDISRMFAV YGRP+IDE AR NEDEDSLHPALKSL
Sbjct: 5   LAIESAPSQILVLGFLHGALNSLKRDISRMFAVFYGRPDIDEAARFNEDEDSLHPALKSL 64

Query: 277 MTTVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGL 336
           MTTVGDHCDLRSSDCFSEK NF+GEGDP AVFNVLDALLKGSLDRLKAMRESICLAKSGL
Sbjct: 65  MTTVGDHCDLRSSDCFSEKHNFNGEGDPGAVFNVLDALLKGSLDRLKAMRESICLAKSGL 124

Query: 337 QKCFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCD 396
           QKCFLEAV QPDYTVMVRDLCLKGKLGAALLLRRKL++EGF VDL+THNYLLNGLCINCD
Sbjct: 125 QKCFLEAVQQPDYTVMVRDLCLKGKLGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCD 184

Query: 397 MEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNI 456
           MEMADSLFREMLE GPSP+CATYNIIIKGFCL MNMDKALDLFYTM NSGIRPSRITYNI
Sbjct: 185 MEMADSLFREMLERGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNI 244

Query: 457 LLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVE 516
           LLHALCKRGIL DARKLLE IL DDIKTTDDAI STILMDG FK GD IQA+ALWD+MVE
Sbjct: 245 LLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDGCFKSGDTIQAIALWDKMVE 304

Query: 517 KKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGE 576
           KKTEID VAYNVLIHGLCLNQDKK AL YV DMLKRGFLPDIFTYNTLIS  CKEGQFG+
Sbjct: 305 KKTEIDVVAYNVLIHGLCLNQDKKSALSYVADMLKRGFLPDIFTYNTLISAFCKEGQFGD 364

Query: 577 AYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIID 636
           AYYIHDVMSRMGVSPDQI YKMIIQ LCM GDAIKA+EFL+ MLEKSMVP+ HIWNLIID
Sbjct: 365 AYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPDPHIWNLIID 424

Query: 637 CYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFP 696
           CYGRYGYL +AIS R+QML AGV PNV+TYNALIHAQV+GGNIFSAYSLKK+MLLLGLFP
Sbjct: 425 CYGRYGYLSNAISTRNQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFP 484

Query: 697 DVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLF 756
           D+VTYNLLI+GACK GQIR+ALQLYDEMLRKGYE DKITYTELI GHCMCG+MKEAEDLF
Sbjct: 485 DIVTYNLLINGACKHGQIRYALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLF 544

Query: 757 IELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRWFTMMA 800
            +LHRSGLPMDIVPFK+IFEKY +IGEP+MALKFY+RW   MA
Sbjct: 545 FQLHRSGLPMDIVPFKIIFEKYQKIGEPNMALKFYRRWLATMA 587

BLAST of Cla022268 vs. NCBI nr
Match: gi|778672274|ref|XP_011649773.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X2 [Cucumis sativus])

HSP 1 Score: 946.8 bits (2446), Expect = 2.4e-272
Identity = 466/523 (89.10%), Postives = 484/523 (92.54%), Query Frame = 1

Query: 277 MTTVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGL 336
           MTTVGDHCDLRSSDCFSEKRNF+GEGDP AVFNVLDALLKGSLDRLK MRESICLAKSGL
Sbjct: 1   MTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLAKSGL 60

Query: 337 QKCFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCD 396
           QKC LEA  QPDYTVMVRDLCLKGK GAALLLRRKL++EGF VDL+THNYLLNGLCINCD
Sbjct: 61  QKCVLEATQQPDYTVMVRDLCLKGKFGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCD 120

Query: 397 MEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNI 456
           MEMADSLFREMLE GPSP+CATYNIIIKGFCL MNMDKALDLFYTM NSGIRPSRITYNI
Sbjct: 121 MEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNI 180

Query: 457 LLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVE 516
           LLHALCKRGIL DARKLLE IL DDIKTTDDAI STILMD  FK GD IQAVALWD+MVE
Sbjct: 181 LLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMVE 240

Query: 517 KKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGE 576
           KKTEID VAYNVLIHGLCLNQDKKIALGYV DMLKRGFLPDIFTYNTLIS  CKEGQFG+
Sbjct: 241 KKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFGD 300

Query: 577 AYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIID 636
           AYYIHDVMSRMGVSPDQI YKMIIQ LCM GDAIKA+EFL+ MLEKSMVPE HIWNLIID
Sbjct: 301 AYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPEPHIWNLIID 360

Query: 637 CYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFP 696
           CYGRYGYL +AIS RDQML AGV PNV+TYNALIHAQV+GGNIFSAYSLKK+MLLLGLFP
Sbjct: 361 CYGRYGYLSNAISKRDQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFP 420

Query: 697 DVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLF 756
           DVVTYNLLI+GACK GQ+RFALQLYDEMLRKGYE DKITYTELI GHCMCG+MKEAEDLF
Sbjct: 421 DVVTYNLLINGACKHGQLRFALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLF 480

Query: 757 IELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRWFTMMA 800
            ELHRSGLPMDIVPFKVIFEKY +IGEPDMALKFY+RW   MA
Sbjct: 481 FELHRSGLPMDIVPFKVIFEKYQKIGEPDMALKFYRRWLARMA 523

BLAST of Cla022268 vs. NCBI nr
Match: gi|659088665|ref|XP_008445101.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X2 [Cucumis melo])

HSP 1 Score: 943.0 bits (2436), Expect = 3.5e-271
Identity = 461/523 (88.15%), Postives = 486/523 (92.93%), Query Frame = 1

Query: 277 MTTVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGL 336
           MTTVGDHCDLRSSDCFSEK NF+GEGDP AVFNVLDALLKGSLDRLKAMRESICLAKSGL
Sbjct: 1   MTTVGDHCDLRSSDCFSEKHNFNGEGDPGAVFNVLDALLKGSLDRLKAMRESICLAKSGL 60

Query: 337 QKCFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCD 396
           QKCFLEAV QPDYTVMVRDLCLKGKLGAALLLRRKL++EGF VDL+THNYLLNGLCINCD
Sbjct: 61  QKCFLEAVQQPDYTVMVRDLCLKGKLGAALLLRRKLIKEGFAVDLVTHNYLLNGLCINCD 120

Query: 397 MEMADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNI 456
           MEMADSLFREMLE GPSP+CATYNIIIKGFCL MNMDKALDLFYTM NSGIRPSRITYNI
Sbjct: 121 MEMADSLFREMLERGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNI 180

Query: 457 LLHALCKRGILEDARKLLENILDDDIKTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVE 516
           LLHALCKRGIL DARKLLE IL DDIKTTDDAI STILMDG FK GD IQA+ALWD+MVE
Sbjct: 181 LLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDGCFKSGDTIQAIALWDKMVE 240

Query: 517 KKTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGE 576
           KKTEID VAYNVLIHGLCLNQDKK AL YV DMLKRGFLPDIFTYNTLIS  CKEGQFG+
Sbjct: 241 KKTEIDVVAYNVLIHGLCLNQDKKSALSYVADMLKRGFLPDIFTYNTLISAFCKEGQFGD 300

Query: 577 AYYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIID 636
           AYYIHDVMSRMGVSPDQI YKMIIQ LCM GDAIKA+EFL+ MLEKSMVP+ HIWNLIID
Sbjct: 301 AYYIHDVMSRMGVSPDQILYKMIIQALCMNGDAIKADEFLHSMLEKSMVPDPHIWNLIID 360

Query: 637 CYGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFP 696
           CYGRYGYL +AIS R+QML AGV PNV+TYNALIHAQV+GGNIFSAYSLKK+MLLLGLFP
Sbjct: 361 CYGRYGYLSNAISTRNQMLVAGVQPNVFTYNALIHAQVRGGNIFSAYSLKKEMLLLGLFP 420

Query: 697 DVVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLF 756
           D+VTYNLLI+GACK GQIR+ALQLYDEMLRKGYE DKITYTELI GHCMCG+MKEAEDLF
Sbjct: 421 DIVTYNLLINGACKHGQIRYALQLYDEMLRKGYEADKITYTELINGHCMCGEMKEAEDLF 480

Query: 757 IELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRWFTMMA 800
            +LHRSGLPMDIVPFK+IFEKY +IGEP+MALKFY+RW   MA
Sbjct: 481 FQLHRSGLPMDIVPFKIIFEKYQKIGEPNMALKFYRRWLATMA 523

BLAST of Cla022268 vs. NCBI nr
Match: gi|645225941|ref|XP_008219809.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g24830 [Prunus mume])

HSP 1 Score: 646.7 bits (1667), Expect = 5.2e-182
Identity = 328/579 (56.65%), Postives = 422/579 (72.88%), Query Frame = 1

Query: 220 ESPPSQNLVLGFLNGALNSLKRDISRMFA-VLYGRPNIDEVARSNEDEDSLHPALKSLMT 279
           ES PS   +L  LN  L+S+K +I+R+F  +L  +   DE + +   +D L    +    
Sbjct: 9   ESSPSHITLLRCLNRTLDSIKHNIARIFVNILCCQAKSDESSWTCRGKDLLPSTFEDFRK 68

Query: 280 TVGDHCDLRSSDCFSEKRNFDGEGDPPAVFNVLDALLKGSLDRLKAMRESICLAKSGLQK 339
              ++  + + + FS+K+N  G+ DP AV NVLDA+L+ SL+RLK MRE I  A  G   
Sbjct: 69  KWDENYHMSAQNWFSKKKNSRGKQDPHAVCNVLDAMLRDSLERLKTMREGISTANIGFLD 128

Query: 340 CFLEAVPQPDYTVMVRDLCLKGKLGAALLLRRKLMREGFVVDLLTHNYLLNGLCINCDME 399
           C L+A    D   +++ LC+ GKLG A  LRRKL+++G V D+LTHNYLLNGLC   D+E
Sbjct: 129 CTLKA-NYTDCMAIIKVLCIDGKLGTAFWLRRKLIKKGIVPDILTHNYLLNGLCKTGDLE 188

Query: 400 MADSLFREMLESGPSPSCATYNIIIKGFCLHMNMDKALDLFYTMANSGIRPSRITYNILL 459
            AD L REMLE+GPSP+CATYN  IKG+C   ++DKAL L  TM NSGIRP+RIT NI++
Sbjct: 189 KADWLIREMLENGPSPNCATYNTFIKGYCRLNDVDKALYLLSTMGNSGIRPNRITCNIIV 248

Query: 460 HALCKRGILEDARKLLENILDDDI-KTTDDAIRSTILMDGYFKGGDMIQAVALWDEMVEK 519
           HALCK+G++E+A KLLE++LDDD  KTT D + ST LMDGY K G M+QA++LW +MV+ 
Sbjct: 249 HALCKKGLMENANKLLEDVLDDDNDKTTSDLVISTTLMDGYVKNGSMVQALSLWHDMVQM 308

Query: 520 KTEIDAVAYNVLIHGLCLNQDKKIALGYVVDMLKRGFLPDIFTYNTLISDLCKEGQFGEA 579
             ++D ++YNVLIHG CL+Q   +A GY+ +M+KRG LP +FTYNT++S LCK G+  EA
Sbjct: 309 NIQVDVLSYNVLIHGFCLSQHMDLAYGYLCEMIKRGILPSVFTYNTILSGLCKGGKLEEA 368

Query: 580 YYIHDVMSRMGVSPDQISYKMIIQGLCMTGDAIKANEFLNLMLEKSMVPEAHIWNLIIDC 639
            Y+H +MSRMGV+PDQISYK++++GLC  GD ++ANEFL  MLEKS+VPE  IWN +IDC
Sbjct: 369 CYVHGLMSRMGVTPDQISYKILVRGLCSKGDVVRANEFLLHMLEKSVVPETLIWNTVIDC 428

Query: 640 YGRYGYLRDAISIRDQMLAAGVLPNVYTYNALIHAQVKGGNIFSAYSLKKDMLLLGLFPD 699
           YGRYG L  A S++DQMLA GV PNVYTYNALIHAQVK GNI  A S KK+MLL GLFP+
Sbjct: 429 YGRYGDLTTAFSVKDQMLAFGVKPNVYTYNALIHAQVKEGNITRALSHKKEMLLSGLFPN 488

Query: 700 VVTYNLLIHGACKCGQIRFALQLYDEMLRKGYEPDKITYTELIRGHCMCGDMKEAEDLFI 759
           VVTYNLLI  AC  G I FA+QLY EML  G +PD ITYTELIRG+CM G+MK+AE+LF 
Sbjct: 489 VVTYNLLIGAACNLGDILFAVQLYREMLITGLDPDMITYTELIRGYCMIGNMKKAEELFE 548

Query: 760 ELHRSGLPMDIVPFKVIFEKYHRIGEPDMALKFYQRWFT 797
            +  SGLP+D VPFKV+ ++Y +I EPDMA   YQ+W T
Sbjct: 549 NIQASGLPIDHVPFKVLVKQYCKIMEPDMAFGIYQKWLT 586

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP396_ARATH8.7e-14547.14Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN... [more]
PPR91_ARATH1.1e-5930.86Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
PP376_ARATH4.3e-5931.55Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidop... [more]
PP445_ARATH4.3e-5930.70Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN... [more]
PP407_ARATH3.6e-5830.91Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LPD4_CUCSA4.1e-30389.19Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379150 PE=4 SV=1[more]
B9SPQ9_RICCO4.0e-17357.71Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
B9SPQ9_RICCO2.6e-0229.55Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
U5FID5_POPTR3.3e-1825.78Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
W9QZ27_9ROSA8.4e-17154.94Uncharacterized protein OS=Morus notabilis GN=L484_014894 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778672271|ref|XP_011649772.1|5.9e-30389.19PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Cuc... [more]
gi|659088663|ref|XP_008445100.1|4.3e-30188.16PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X1 [Cuc... [more]
gi|778672274|ref|XP_011649773.1|2.4e-27289.10PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X2 [Cuc... [more]
gi|659088665|ref|XP_008445101.1|3.5e-27188.15PREDICTED: pentatricopeptide repeat-containing protein At5g24830 isoform X2 [Cuc... [more]
gi|645225941|ref|XP_008219809.1|5.2e-18256.65PREDICTED: pentatricopeptide repeat-containing protein At5g24830 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR006843PAP/fibrillin_dom
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009451 RNA modification
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU42292watermelon EST collection version 2.0transcribed_cluster
WMU65929watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla022268Cla022268.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU42292WMU42292transcribed_cluster
WMU65929WMU65929transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 383..411
score: 6.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 696..744
score: 1.8E-17coord: 556..604
score: 5.9E-14coord: 627..672
score: 2.3E-9coord: 418..463
score: 4.1E-14coord: 492..534
score: 3.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 418..450
score: 2.1E-7coord: 559..592
score: 3.0E-7coord: 383..416
score: 4.9E-7coord: 664..698
score: 1.6E-4coord: 734..767
score: 5.8E-6coord: 492..522
score: 2.8E-5coord: 452..483
score: 1.4E-5coord: 699..732
score: 1.2E-9coord: 524..558
score: 3.0E-4coord: 594..626
score: 9.0E-4coord: 630..663
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 415..449
score: 11.334coord: 557..591
score: 12.825coord: 627..661
score: 10.424coord: 345..379
score: 7.059coord: 732..766
score: 11.345coord: 592..626
score: 9.723coord: 697..731
score: 14.184coord: 487..521
score: 8.55coord: 450..484
score: 10.567coord: 662..696
score: 9.767coord: 522..556
score: 10.063coord: 767..797
score: 5.546coord: 380..414
score: 10
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 76..232
score: 3.
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 626..794
score: 6.4E-5coord: 459..518
score: 6.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 352..805
score: 8.4E
NoneNo IPR availablePANTHERPTHR24015:SF586SUBFAMILY NOT NAMEDcoord: 352..805
score: 8.4E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 386..521
score: 8.3

The following gene(s) are paralogous to this gene:

None