Cla021890 (gene) Watermelon (97103) v1

NameCla021890
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionU4/U6 small nuclear ribonucleoprotein Prp4 (AHRD V1 **-- B5X168_SALSA); contains Interpro domain(s) IPR017986 WD40 repeat, region
LocationChr8 : 18225784 .. 18228521 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATTCAACCAGCAGCTACATCAGTTATTCCACCTTCGATTGTCCCTGCCATTGCTCCTATCCCCACTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGACCCCATGTAACACAAAATGGTGAGATGAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGGGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGTCGTCTTGGTGAACCCATAACCCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGTTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACCGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCAGCTTCACGTCTTGAGCGTGCAAAGAGGAAAAGGGATGACCCAGATGAAGATGTGGAAGCCGAAATGGATTGGGCTCTGAGGCAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGGTAAACCTTCTCATTTTTGCAGTTCAAAATTTTTAGTTTCTATACCAGTTTCTCCTTTCCAATATCACCCCCATTTCACCTCCTGATAGAAGGGGAGGAAAAAACAAAGGGAATAAATCGTTGTGGCTATAAATTAGCTATCATCTTCCTACTCAGCTACAATTCCTCAGCTGAACAAGAAACCAAAGATAATGTACAAGTGAAGGTTTTTCCATATTCGATTCCAATATTTGATAAGCTTTATAGGCTTTGTATTTAGCTTTCATTTTACTTTTCTGCATACTTCTACTGGCTTTGCATGTGATGGTTTGCATTTTTCTTCTTGTTTTATTTCTGTAGTTCATTAAGTGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAGTGAGTGTTTAGCAACTGCGTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTAAAACATTCGAGGGCCATTTGGACCGCCTTGCACGAATTGCCTTCCACCCATCAGGCAAGTACTTGGGCACGACTAGCTTTGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTACTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCTTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGAACGGGTAGAAGTGTTCTTGCCTTAGAAGGCCATGTCAAGCCAGTAAATCTCTCTCCTTACTTTCTATGGGACTGTAGAACATTTGTTTTCAATAAATTTGACTCATTTGCTCCTTACTGATACCTTGCTTTTCAATGGATTCCATATGTCTATGATGTTATAACCAGGTCCTTGGAGTTAGTTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGCGAAGATAACACTTGTAGGATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACCTAGTTTCACAGGTGAAATATGAGCCCCAAGAAGGGTACTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGGTAATCTTGAACACTGTCAGGATGATATAATATTGCTCAAATCTTGATATTTTCATTTGATTGTTGCTTCATCTCACTTGCAGTCTAAGGTTTCATTTACTATAATTATTTTTGGCAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCATGAAGCAAAAGTTACATCTTTGGATATAATTTCAGGTCAGTTATTTATCAACTCCTAGGTCATTACTATTATTGTTGTTTTTACACTGATTACCACCTAGGTTATTACTGTACACCATTTTGCATCATTTTATGGCCTTCCACACATTTCAGTTACGTACATTTTTTTTCCTATGTTTTTCATGGTATAATGAACTAATGTGCTTGAAATAATTTGACTGGAGGACGATAATTTGTTGGGTTTGATGACGTATGCCTTGCCTACAGTCTACAGGATTTCCAGATTGCAAAACCCCAATCCTTTGCTCTTGGATCGTTATTTCATATCACTGAAATCTTCCCTTCAAAACCTCCTCATCTAGACCCCTATGAGAATGCCCCCTCCCTTCCCGGAAATGGAGAAAAAACCTGGCCACAAAATTTCTGAAAATCTGCACTATGAGTTCAAAAAATCCAGAAAACTTTAGTCATTACATTTACTTTACTTTTGAAGTTGTCCTTACCTCTTCTTGCTGGGGTAGGGGGAACTTCCTTGAGGGGTTTCAGGTGGGGGAAGGTATGGGAAGGGATATGA

mRNA sequence

ATGGAAGTTGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATTCAACCAGCAGCTACATCAGTTATTCCACCTTCGATTGTCCCTGCCATTGCTCCTATCCCCACTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGACCCCATGTAACACAAAATGGTGAGATGAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGGGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGTCGTCTTGGTGAACCCATAACCCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGTTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACCGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCAGCTTCACGTCTTGAGCGTGCAAAGAGGAAAAGGGATGACCCAGATGAAGATGTGGAAGCCGAAATGGATTGGGCTCTGAGGCAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAGTGAGTGTTTAGCAACTGCGTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTAAAACATTCGAGGGCCATTTGGACCGCCTTGCACGAATTGCCTTCCACCCATCAGGCAAGTACTTGGGCACGACTAGCTTTGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTACTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCTTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGAACGGGTAGAAGTGTTCTTGCCTTAGAAGGCCATGTCAAGCCAGTCCTTGGAGTTAGTTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGCGAAGATAACACTTGTAGGATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACCTAGTTTCACAGGTGAAATATGAGCCCCAAGAAGGGTACTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCATGAAGCAAAAGTTACATCTTTGGATATAATTTCAGGGGGAACTTCCTTGAGGGGTTTCAGGTGGGGGAAGGTATGGGAAGGGATATGA

Coding sequence (CDS)

ATGGAAGTTGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATTCAACCAGCAGCTACATCAGTTATTCCACCTTCGATTGTCCCTGCCATTGCTCCTATCCCCACTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGACCCCATGTAACACAAAATGGTGAGATGAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGGGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGTCGTCTTGGTGAACCCATAACCCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGTTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACCGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCAGCTTCACGTCTTGAGCGTGCAAAGAGGAAAAGGGATGACCCAGATGAAGATGTGGAAGCCGAAATGGATTGGGCTCTGAGGCAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAGTGAGTGTTTAGCAACTGCGTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTAAAACATTCGAGGGCCATTTGGACCGCCTTGCACGAATTGCCTTCCACCCATCAGGCAAGTACTTGGGCACGACTAGCTTTGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTACTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCTTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGAACGGGTAGAAGTGTTCTTGCCTTAGAAGGCCATGTCAAGCCAGTCCTTGGAGTTAGTTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGCGAAGATAACACTTGTAGGATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACCTAGTTTCACAGGTGAAATATGAGCCCCAAGAAGGGTACTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCATGAAGCAAAAGTTACATCTTTGGATATAATTTCAGGGGGAACTTCCTTGAGGGGTTTCAGGTGGGGGAAGGTATGGGAAGGGATATGA

Protein sequence

MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISGGTSLRGFRWGKVWEGI
BLAST of Cla021890 vs. Swiss-Prot
Match: PRP4L_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=LIS PE=2 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 1.8e-197
Identity = 341/509 (66.99%), Postives = 402/509 (78.98%), Query Frame = 1

Query: 37  AATSVIPPSIVPAIAPIPTPIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPS 96
           A   V+PPS  P +APIP     P+A    RPP FRP V+QNG ++TSDSDSE D+    
Sbjct: 34  AIPPVVPPSFPPPMAPIPMMPHPPVA----RPPTFRPPVSQNGGVKTSDSDSESDD---- 93

Query: 97  RTAPGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPIT 156
                     E+SEES+QVRERQEKA+Q+ L+KRRA+A+AVPTND AVR RLRRLGEPIT
Sbjct: 94  -------EHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPIT 153

Query: 157 LFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEG 216
           LFGE+EMERR RL  ++ R D  GQL+KL+K HEE+        EE ++EVL+YPF+TEG
Sbjct: 154 LFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTPK----EEVDDEVLEYPFFTEG 213

Query: 217 SKALLDARIDIAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGD 276
            K L +ARI+IAK+S+ RAA R++RAKR+RDDPDED++AE  WAL+ A  + LDCS  GD
Sbjct: 214 PKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGD 273

Query: 277 DRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRK-VSNFKGHTERVTDVMFSPVSECLA 336
           DRPL+GCSFS DGK LAT SLSGV KLW MPQV   ++  K H ER TDV+FSPV +CLA
Sbjct: 274 DRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLA 333

Query: 337 TASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVEL 396
           TASADRTA+LW  +G+LL+TFEGHLDRLAR+AFHPSGKYLGTTS+DKTWRLWDI TG EL
Sbjct: 334 TASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 393

Query: 397 LLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPN 456
           LLQEGHSRSVYGIAF  DG+L +SCGLD+LARVWDLRTGRS+L  +GH+KPV  V+FSPN
Sbjct: 394 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 453

Query: 457 GYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWS 516
           GYHLA+GGEDN CRIWDLR +KSLYIIPAH+NLVSQVKYEPQEGYFL TAS+DM   IWS
Sbjct: 454 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 513

Query: 517 ARDFKPVKTLSGHEAKVTSLDIISGGTSL 545
            RDF  VK+L+GHE+KV SLDI +  + +
Sbjct: 514 GRDFSLVKSLAGHESKVASLDITADSSCI 523


HSP 2 Score: 49.7 bits (117), Expect = 1.2e-04
Identity = 23/64 (35.94%), Postives = 33/64 (51.56%), Query Frame = 1

Query: 288 DGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWS 347
           +G FLAT+S      +WS      V +  GH  +V  +  +  S C+AT S DRT +LW+
Sbjct: 477 EGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWT 536

Query: 348 AEGS 352
           + G+
Sbjct: 537 SSGN 540

BLAST of Cla021890 vs. Swiss-Prot
Match: PRP4_BOVIN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.1e-109
Identity = 206/444 (46.40%), Postives = 284/444 (63.96%), Query Frame = 1

Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPHSLKVARLW 189

Query: 227 IAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSEC--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P S          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 347 ADRTARLWSAEGSL-LKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 527 DFKPVKTLSGHEAKVTSLDIISGG 542
            + P+KTL+GHE KV  LDI S G
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDG 503


HSP 2 Score: 75.5 bits (184), Expect = 2.1e-12
Identity = 39/148 (26.35%), Postives = 65/148 (43.92%), Query Frame = 1

Query: 284 SFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTA 343
           +F  DG    T  L    ++W +   R +   +GH + +  + FSP    +AT S D T 
Sbjct: 371 AFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTC 430

Query: 344 RLWS-AEGSLLKTFEGHLDRLARIAFHP-SGKYLGTTSFDKTWRLWDIETGVELLLQEGH 403
           ++W   +   + T   H + +  + F P  G +L T ++D T ++W       L    GH
Sbjct: 431 KVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH 490

Query: 404 SRSVYGIAFHHDGSLVSSCGLDALARVW 430
              V G+    DG L+++C  D   ++W
Sbjct: 491 EGKVMGLDISSDGQLIATCSYDRTFKLW 518

BLAST of Cla021890 vs. Swiss-Prot
Match: PRP4_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2)

HSP 1 Score: 398.7 bits (1023), Expect = 1.1e-109
Identity = 206/444 (46.40%), Postives = 284/444 (63.96%), Query Frame = 1

Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 71  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 130

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 131 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 190

Query: 227 IAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 191 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 250

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSEC--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P S          LA+ +
Sbjct: 251 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCA 310

Query: 347 ADRTARLWSAEGSL-LKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 311 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 370

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 371 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 430

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 431 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 490

Query: 527 DFKPVKTLSGHEAKVTSLDIISGG 542
            + P+KTL+GHE KV  LDI S G
Sbjct: 491 GWSPLKTLAGHEGKVMGLDISSDG 504


HSP 2 Score: 75.5 bits (184), Expect = 2.1e-12
Identity = 39/148 (26.35%), Postives = 65/148 (43.92%), Query Frame = 1

Query: 284 SFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTA 343
           +F  DG    T  L    ++W +   R +   +GH + +  + FSP    +AT S D T 
Sbjct: 372 AFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTC 431

Query: 344 RLWS-AEGSLLKTFEGHLDRLARIAFHP-SGKYLGTTSFDKTWRLWDIETGVELLLQEGH 403
           ++W   +   + T   H + +  + F P  G +L T ++D T ++W       L    GH
Sbjct: 432 KVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH 491

Query: 404 SRSVYGIAFHHDGSLVSSCGLDALARVW 430
              V G+    DG L+++C  D   ++W
Sbjct: 492 EGKVMGLDISSDGQLIATCSYDRTFKLW 519

BLAST of Cla021890 vs. Swiss-Prot
Match: PRP4_PONAB (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.1e-109
Identity = 206/444 (46.40%), Postives = 284/444 (63.96%), Query Frame = 1

Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 227 IAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRASQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSEC--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P S          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 347 ADRTARLWSAEGSL-LKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 527 DFKPVKTLSGHEAKVTSLDIISGG 542
            + P+KTL+GHE KV  LDI S G
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDG 503


HSP 2 Score: 75.5 bits (184), Expect = 2.1e-12
Identity = 39/148 (26.35%), Postives = 65/148 (43.92%), Query Frame = 1

Query: 284 SFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTA 343
           +F  DG    T  L    ++W +   R +   +GH + +  + FSP    +AT S D T 
Sbjct: 371 AFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTC 430

Query: 344 RLWS-AEGSLLKTFEGHLDRLARIAFHP-SGKYLGTTSFDKTWRLWDIETGVELLLQEGH 403
           ++W   +   + T   H + +  + F P  G +L T ++D T ++W       L    GH
Sbjct: 431 KVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGH 490

Query: 404 SRSVYGIAFHHDGSLVSSCGLDALARVW 430
              V G+    DG L+++C  D   ++W
Sbjct: 491 EGKVMGLDISSDGQLIATCSYDRTFKLW 518

BLAST of Cla021890 vs. Swiss-Prot
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=1 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.8e-109
Identity = 206/444 (46.40%), Postives = 284/444 (63.96%), Query Frame = 1

Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 227 IAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSEC--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P S          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 347 ADRTARLWSAEGSL-LKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHP 489

Query: 527 DFKPVKTLSGHEAKVTSLDIISGG 542
            + P+KTL+GHE KV  LDI S G
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDG 503


HSP 2 Score: 75.1 bits (183), Expect = 2.7e-12
Identity = 39/148 (26.35%), Postives = 65/148 (43.92%), Query Frame = 1

Query: 284 SFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTA 343
           +F  DG    T  L    ++W +   R +   +GH + +  + FSP    +AT S D T 
Sbjct: 371 AFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTC 430

Query: 344 RLWS-AEGSLLKTFEGHLDRLARIAFHP-SGKYLGTTSFDKTWRLWDIETGVELLLQEGH 403
           ++W   +   + T   H + +  + F P  G +L T ++D T ++W       L    GH
Sbjct: 431 KVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGH 490

Query: 404 SRSVYGIAFHHDGSLVSSCGLDALARVW 430
              V G+    DG L+++C  D   ++W
Sbjct: 491 EGKVMGLDISSDGQLIATCSYDRTFKLW 518

BLAST of Cla021890 vs. TrEMBL
Match: A0A0A0KHD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404170 PE=4 SV=1)

HSP 1 Score: 1053.5 bits (2723), Expect = 8.9e-305
Identity = 527/541 (97.41%), Postives = 534/541 (98.71%), Query Frame = 1

Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+LDNPAEP QPAATSVIPPSIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAPSRTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPV+ECLATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISG 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 G 542
           G
Sbjct: 541 G 541

BLAST of Cla021890 vs. TrEMBL
Match: A0A0A0KHD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404170 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.2e-04
Identity = 25/70 (35.71%), Postives = 37/70 (52.86%), Query Frame = 1

Query: 288 DGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWS 347
           +G FL T+S    AK+WS    + V    GH  +VT +      +C+AT S DRT +LWS
Sbjct: 498 EGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWS 557

Query: 348 AEGSLLKTFE 358
                ++T +
Sbjct: 558 VNSKDIQTMD 567


HSP 2 Score: 859.0 bits (2218), Expect = 3.2e-246
Identity = 436/556 (78.42%), Postives = 484/556 (87.05%), Query Frame = 1

Query: 1   MEVDDQNP-ASTAAESPETLPGGEN--EDLDNPA-EPIQPAATSVIPPS--------IVP 60
           MEVD++NP +ST  E+   +  G+     +++ A +PI P    VIPP         IVP
Sbjct: 1   MEVDEENPPSSTPVEASSLVDDGQTVVPAVNSTAIQPIPPIIPPVIPPPVVPPVAPPIVP 60

Query: 61  AIAPIPT----PIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTA 120
           A+APIPT    P++RPLAPLP RPP+ RP V QNGEMRTSDSDS+ D+  P RTAPGST 
Sbjct: 61  AMAPIPTLPTPPVLRPLAPLPIRPPIPRPPVPQNGEMRTSDSDSD-DDSDPGRTAPGSTQ 120

Query: 121 EYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREME 180
           EYE+SEESRQVRERQEKAM E +MKRRASALAVPTNDMAVRARLRRLGEPITLFGEREME
Sbjct: 121 EYEISEESRQVRERQEKAMLELMMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREME 180

Query: 181 RRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDAR 240
           RRDRLR +MA+LDAEGQLEKLMK HEEEEAAA+   EEAEEE+LQYPFYTEGSKALLDAR
Sbjct: 181 RRDRLRMLMAKLDAEGQLEKLMKAHEEEEAAASATGEEAEEEMLQYPFYTEGSKALLDAR 240

Query: 241 IDIAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCS 300
           IDIAKYSI+RAA+RL+RA+RKRDDPDEDV+AEMDWAL+QAGSL LDCSEIGDDRPLSGCS
Sbjct: 241 IDIAKYSIVRAATRLQRAQRKRDDPDEDVDAEMDWALKQAGSLALDCSEIGDDRPLSGCS 300

Query: 301 FSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTAR 360
            S DGKFLAT SL+GVAKLWSMP+V+KVS  KGHTER+TDV FSP    +AT SADRTAR
Sbjct: 301 LSRDGKFLATCSLTGVAKLWSMPKVQKVSTLKGHTERLTDVKFSPTDNLIATGSADRTAR 360

Query: 361 LWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRS 420
           LW+ EG  LKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDI+TGVELLLQEG SRS
Sbjct: 361 LWNTEGFHLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIDTGVELLLQEGQSRS 420

Query: 421 VYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGE 480
           VYGI FH DGSL +SCGLD+L RVWDLRTGRS+LALEGHVKPVLG+SFS NGY+LA+GGE
Sbjct: 421 VYGIDFHQDGSLAASCGLDSLVRVWDLRTGRSILALEGHVKPVLGLSFSANGYYLASGGE 480

Query: 481 DNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKT 540
           DNTCRIWDLRKKKS+Y+IPAHSNL+SQVK+EPQEGYFL+TAS+DMTAKIWSARDFKPVKT
Sbjct: 481 DNTCRIWDLRKKKSVYMIPAHSNLISQVKFEPQEGYFLITASYDMTAKIWSARDFKPVKT 540

BLAST of Cla021890 vs. TrEMBL
Match: F6HLM8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05930 PE=4 SV=1)

HSP 1 Score: 856.7 bits (2212), Expect = 1.6e-245
Identity = 425/548 (77.55%), Postives = 467/548 (85.22%), Query Frame = 1

Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDN----PAEPIQPAATSVIPPSIVPAIAPIPT- 60
           M+VD++NP S +   P      +   +      P   +QP   S++PP IVP IAPIP+ 
Sbjct: 83  MDVDEENPVSVSLAEPSAAVTDDQTPVSTIDPTPLPAMQPIIPSLVPPPIVPPIAPIPSV 142

Query: 61  --PIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESR 120
             PI+RPLAPLP RPP+ RP + QNGEMR SDSDS+ D+   ++ A GS  EYE+SEESR
Sbjct: 143 SAPILRPLAPLPVRPPVLRPPLPQNGEMRASDSDSDRDDSGRAQAASGSAVEYEISEESR 202

Query: 121 QVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIM 180
           Q RERQEKA QEFLMKRRASALAVPTNDMAVR RLRRLGEPITLFGEREMERRDRLR IM
Sbjct: 203 QFRERQEKAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMIM 262

Query: 181 ARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSIL 240
           A+LDAEGQLEKLMK HEEEEAAA    EE EEE LQYPFYTEGSK+LL+AR++IAKYSI 
Sbjct: 263 AKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKSLLEARVEIAKYSIK 322

Query: 241 RAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLA 300
           RAASRL RA+RKRDDPDED++AEMDW L++AGSLVLDCSEIGDDRPLSGCSFS DGK LA
Sbjct: 323 RAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSGCSFSHDGKLLA 382

Query: 301 TSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLL 360
             +LSGVAK+WSMPQV KVS  KGHTER TDV FSP    LATASADRTARLW++EGSLL
Sbjct: 383 ACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRTARLWNSEGSLL 442

Query: 361 KTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHD 420
           KTFEGHLDRLARIAFHPSGKYLGT SFDKTWRLWD+ETG ELLLQEGHSRSVYGI+FH D
Sbjct: 443 KTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGISFHRD 502

Query: 421 GSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDL 480
           GSL +SCGLDAL RVWDLR+GRS+LALEGHVKPVLG+ FSPNGYHLATG EDNTCRIWDL
Sbjct: 503 GSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATGAEDNTCRIWDL 562

Query: 481 RKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVT 540
           RKKKSLY+IPAHSNLVSQVK+EPQEGYFLVTAS+DMTAK+WSARDFKPVKTLSGHEAKVT
Sbjct: 563 RKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVT 622

Query: 541 SLDIISGG 542
           SLDI   G
Sbjct: 623 SLDITEDG 630

BLAST of Cla021890 vs. TrEMBL
Match: F6HLM8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05930 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.6e-03
Identity = 24/61 (39.34%), Postives = 34/61 (55.74%), Query Frame = 1

Query: 288 DGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWS 347
           +G FL T+S    AK+WS    + V    GH  +VT +  +    C+AT S DRT +LWS
Sbjct: 587 EGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWS 646

Query: 348 A 349
           +
Sbjct: 647 S 647


HSP 2 Score: 850.5 bits (2196), Expect = 1.1e-243
Identity = 426/541 (78.74%), Postives = 463/541 (85.58%), Query Frame = 1

Query: 4    DDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPT---PIIRP 63
            DDQ P ST   +P  LP             +QP   S++PP IVP IAPIP+   PI+RP
Sbjct: 533  DDQTPVSTIDPTP--LPA------------MQPIIPSLVPPPIVPPIAPIPSVSAPILRP 592

Query: 64   LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 123
            LAPLP RPP+ RP + QNGEMR SDSDS+ D+   ++ A GS  EYE+SEESRQ RERQE
Sbjct: 593  LAPLPVRPPVLRPPLPQNGEMRASDSDSDRDDSGRAQAASGSAVEYEISEESRQFRERQE 652

Query: 124  KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 183
            KA QEFLMKRRASALAVPTNDMAVR RLRRLGEPITLFGEREMERRDRLR IMA+LDAEG
Sbjct: 653  KAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMIMAKLDAEG 712

Query: 184  QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 243
            QLEKLMK HEEEEAAA    EE EEE LQYPFYTEGSK+LL+AR++IAKYSI RAASRL 
Sbjct: 713  QLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKSLLEARVEIAKYSIKRAASRLY 772

Query: 244  RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 303
            RA+RKRDDPDED++AEMDW L++AGSLVLDCSEIGDDRPLSGCSFS DGK LA  +LSGV
Sbjct: 773  RARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSGCSFSHDGKLLAACALSGV 832

Query: 304  AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 363
            AK+WSMPQV KVS  KGHTER TDV FSP    LATASADRTARLW++EGSLLKTFEGHL
Sbjct: 833  AKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRTARLWNSEGSLLKTFEGHL 892

Query: 364  DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 423
            DRLARIAFHPSGKYLGT SFDKTWRLWD+ETG ELLLQEGHSRSVYGI+FH DGSL +SC
Sbjct: 893  DRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGISFHRDGSLAASC 952

Query: 424  GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 483
            GLDAL RVWDLR+GRS+LALEGHVKPVLG+ FSPNGYHLATG EDNTCRIWDLRKKKSLY
Sbjct: 953  GLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATGAEDNTCRIWDLRKKKSLY 1012

Query: 484  IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISG 542
            +IPAHSNLVSQVK+EPQEGYFLVTAS+DMTAK+WSARDFKPVKTLSGHEAKVTSLDI   
Sbjct: 1013 VIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDITED 1059

BLAST of Cla021890 vs. TrEMBL
Match: A5ATG0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016440 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.6e-03
Identity = 24/61 (39.34%), Postives = 34/61 (55.74%), Query Frame = 1

Query: 288  DGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWS 347
            +G FL T+S    AK+WS    + V    GH  +VT +  +    C+AT S DRT +LWS
Sbjct: 1016 EGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWS 1075

Query: 348  A 349
            +
Sbjct: 1076 S 1076


HSP 2 Score: 833.9 bits (2153), Expect = 1.1e-238
Identity = 415/546 (76.01%), Postives = 468/546 (85.71%), Query Frame = 1

Query: 1   MEVDDQNPA--STAAESPETLPGGENE-DLDNPAEPIQPAATSVIPPSI--VPAIAPIPT 60
           M  +++NPA  +   ES   +P  E   D  +P +P  P    VIP SI  +P+IAPIP 
Sbjct: 1   MAAEEENPALSNLPEESSAVVPDDELMIDNSSPIQPTPPIIPPVIPSSIPVLPSIAPIPI 60

Query: 61  PIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQV 120
              RPLAPLP RPP  RP   QNGEMRTSDSDS+ +EL+P+ T PGST  YE+SE SR V
Sbjct: 61  VPPRPLAPLPIRPPATRPPGVQNGEMRTSDSDSDQEELSPTGTTPGSTGGYEISEASRLV 120

Query: 121 RERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMAR 180
           RERQ+KAMQEF+MK+RA+ALAVPTNDMAVR RLRRLGEPITLFGEREMERRDRLR +MA+
Sbjct: 121 RERQQKAMQEFMMKKRAAALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMLMAK 180

Query: 181 LDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA 240
           LD+EGQLEKLMKVHEEEEAA+T   E+AEEE +QYPFYTEGSK LLDARIDIAKYSI +A
Sbjct: 181 LDSEGQLEKLMKVHEEEEAASTAAAEDAEEEFVQYPFYTEGSKELLDARIDIAKYSISKA 240

Query: 241 ASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATS 300
           A RL+RA+RKRDDPDED +AE+DW+L QA SL L+CSE+GDDRPLSGCSFS DG+ LAT 
Sbjct: 241 ALRLQRARRKRDDPDEDEDAEIDWSLNQAESLSLNCSELGDDRPLSGCSFSCDGEMLATC 300

Query: 301 SLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKT 360
           SLSGVAK+WS+PQV KVSN KGH ER TDV FSPV   LATASADRTARLW+ +GSLL  
Sbjct: 301 SLSGVAKIWSVPQVTKVSNLKGHMERATDVAFSPVHNHLATASADRTARLWNTDGSLLMK 360

Query: 361 FEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGS 420
           FEGHLDRLAR+AFHPSGKYLGTTSFDKTWRLWDI++GVELLLQEGHSRS+YGIAFHHDGS
Sbjct: 361 FEGHLDRLARVAFHPSGKYLGTTSFDKTWRLWDIDSGVELLLQEGHSRSIYGIAFHHDGS 420

Query: 421 LVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRK 480
           L +SCGLDALARVWDLRTGRS++A EGHVKP+LG+SFSPNGYHLATGGEDNTCRIWDLRK
Sbjct: 421 LAASCGLDALARVWDLRTGRSIMAFEGHVKPLLGISFSPNGYHLATGGEDNTCRIWDLRK 480

Query: 481 KKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSL 540
           KKSLY+IPAHSNLVSQVK+EPQEGY+LVT+S+DMTAK+WS RDFK VKTLS HEAKVTSL
Sbjct: 481 KKSLYVIPAHSNLVSQVKFEPQEGYYLVTSSYDMTAKVWSGRDFKHVKTLSAHEAKVTSL 540

Query: 541 DIISGG 542
           DI + G
Sbjct: 541 DISADG 546

BLAST of Cla021890 vs. NCBI nr
Match: gi|449458027|ref|XP_004146749.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus])

HSP 1 Score: 1053.5 bits (2723), Expect = 1.3e-304
Identity = 527/541 (97.41%), Postives = 534/541 (98.71%), Query Frame = 1

Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+LDNPAEP QPAATSVIPPSIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAPSRTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPV+ECLATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISG 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 G 542
           G
Sbjct: 541 G 541

BLAST of Cla021890 vs. NCBI nr
Match: gi|449458027|ref|XP_004146749.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus])

HSP 1 Score: 55.1 bits (131), Expect = 4.6e-04
Identity = 25/70 (35.71%), Postives = 37/70 (52.86%), Query Frame = 1

Query: 288 DGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWS 347
           +G FL T+S    AK+WS    + V    GH  +VT +      +C+AT S DRT +LWS
Sbjct: 498 EGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWS 557

Query: 348 AEGSLLKTFE 358
                ++T +
Sbjct: 558 VNSKDIQTMD 567


HSP 2 Score: 1047.3 bits (2707), Expect = 9.2e-303
Identity = 524/541 (96.86%), Postives = 532/541 (98.34%), Query Frame = 1

Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+LDNPAEP QPAATSVIPPSIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAP+RTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPV+ECLATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISG 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 G 542
           G
Sbjct: 541 G 541

BLAST of Cla021890 vs. NCBI nr
Match: gi|659129524|ref|XP_008464716.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo])

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-03
Identity = 25/70 (35.71%), Postives = 36/70 (51.43%), Query Frame = 1

Query: 288 DGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWS 347
           +G FL T+S    AK+WS    + V    GH  +VT +      +C+AT S DRT +LWS
Sbjct: 498 EGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWS 557

Query: 348 AEGSLLKTFE 358
                 +T +
Sbjct: 558 VNSKDKQTMD 567


HSP 2 Score: 859.0 bits (2218), Expect = 4.6e-246
Identity = 436/556 (78.42%), Postives = 484/556 (87.05%), Query Frame = 1

Query: 1   MEVDDQNP-ASTAAESPETLPGGEN--EDLDNPA-EPIQPAATSVIPPS--------IVP 60
           MEVD++NP +ST  E+   +  G+     +++ A +PI P    VIPP         IVP
Sbjct: 1   MEVDEENPPSSTPVEASSLVDDGQTVVPAVNSTAIQPIPPIIPPVIPPPVVPPVAPPIVP 60

Query: 61  AIAPIPT----PIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTA 120
           A+APIPT    P++RPLAPLP RPP+ RP V QNGEMRTSDSDS+ D+  P RTAPGST 
Sbjct: 61  AMAPIPTLPTPPVLRPLAPLPIRPPIPRPPVPQNGEMRTSDSDSD-DDSDPGRTAPGSTQ 120

Query: 121 EYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREME 180
           EYE+SEESRQVRERQEKAM E +MKRRASALAVPTNDMAVRARLRRLGEPITLFGEREME
Sbjct: 121 EYEISEESRQVRERQEKAMLELMMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREME 180

Query: 181 RRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDAR 240
           RRDRLR +MA+LDAEGQLEKLMK HEEEEAAA+   EEAEEE+LQYPFYTEGSKALLDAR
Sbjct: 181 RRDRLRMLMAKLDAEGQLEKLMKAHEEEEAAASATGEEAEEEMLQYPFYTEGSKALLDAR 240

Query: 241 IDIAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCS 300
           IDIAKYSI+RAA+RL+RA+RKRDDPDEDV+AEMDWAL+QAGSL LDCSEIGDDRPLSGCS
Sbjct: 241 IDIAKYSIVRAATRLQRAQRKRDDPDEDVDAEMDWALKQAGSLALDCSEIGDDRPLSGCS 300

Query: 301 FSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTAR 360
            S DGKFLAT SL+GVAKLWSMP+V+KVS  KGHTER+TDV FSP    +AT SADRTAR
Sbjct: 301 LSRDGKFLATCSLTGVAKLWSMPKVQKVSTLKGHTERLTDVKFSPTDNLIATGSADRTAR 360

Query: 361 LWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRS 420
           LW+ EG  LKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDI+TGVELLLQEG SRS
Sbjct: 361 LWNTEGFHLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIDTGVELLLQEGQSRS 420

Query: 421 VYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGE 480
           VYGI FH DGSL +SCGLD+L RVWDLRTGRS+LALEGHVKPVLG+SFS NGY+LA+GGE
Sbjct: 421 VYGIDFHQDGSLAASCGLDSLVRVWDLRTGRSILALEGHVKPVLGLSFSANGYYLASGGE 480

Query: 481 DNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKT 540
           DNTCRIWDLRKKKS+Y+IPAHSNL+SQVK+EPQEGYFL+TAS+DMTAKIWSARDFKPVKT
Sbjct: 481 DNTCRIWDLRKKKSVYMIPAHSNLISQVKFEPQEGYFLITASYDMTAKIWSARDFKPVKT 540

BLAST of Cla021890 vs. NCBI nr
Match: gi|731400356|ref|XP_010653924.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Vitis vinifera])

HSP 1 Score: 856.7 bits (2212), Expect = 2.3e-245
Identity = 425/548 (77.55%), Postives = 467/548 (85.22%), Query Frame = 1

Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDN----PAEPIQPAATSVIPPSIVPAIAPIPT- 60
           M+VD++NP S +   P      +   +      P   +QP   S++PP IVP IAPIP+ 
Sbjct: 1   MDVDEENPVSVSLAEPSAAVTDDQTPVSTIDPTPLPAMQPIIPSLVPPPIVPPIAPIPSV 60

Query: 61  --PIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESR 120
             PI+RPLAPLP RPP+ RP + QNGEMR SDSDS+ D+   ++ A GS  EYE+SEESR
Sbjct: 61  SAPILRPLAPLPVRPPVLRPPLPQNGEMRASDSDSDRDDSGRAQAASGSAVEYEISEESR 120

Query: 121 QVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIM 180
           Q RERQEKA QEFLMKRRASALAVPTNDMAVR RLRRLGEPITLFGEREMERRDRLR IM
Sbjct: 121 QFRERQEKAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMIM 180

Query: 181 ARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSIL 240
           A+LDAEGQLEKLMK HEEEEAAA    EE EEE LQYPFYTEGSK+LL+AR++IAKYSI 
Sbjct: 181 AKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKSLLEARVEIAKYSIK 240

Query: 241 RAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLA 300
           RAASRL RA+RKRDDPDED++AEMDW L++AGSLVLDCSEIGDDRPLSGCSFS DGK LA
Sbjct: 241 RAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSGCSFSHDGKLLA 300

Query: 301 TSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLL 360
             +LSGVAK+WSMPQV KVS  KGHTER TDV FSP    LATASADRTARLW++EGSLL
Sbjct: 301 ACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRTARLWNSEGSLL 360

Query: 361 KTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHD 420
           KTFEGHLDRLARIAFHPSGKYLGT SFDKTWRLWD+ETG ELLLQEGHSRSVYGI+FH D
Sbjct: 361 KTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGISFHRD 420

Query: 421 GSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDL 480
           GSL +SCGLDAL RVWDLR+GRS+LALEGHVKPVLG+ FSPNGYHLATG EDNTCRIWDL
Sbjct: 421 GSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATGAEDNTCRIWDL 480

Query: 481 RKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVT 540
           RKKKSLY+IPAHSNLVSQVK+EPQEGYFLVTAS+DMTAK+WSARDFKPVKTLSGHEAKVT
Sbjct: 481 RKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVT 540

Query: 541 SLDIISGG 542
           SLDI   G
Sbjct: 541 SLDITEDG 548

BLAST of Cla021890 vs. NCBI nr
Match: gi|731400356|ref|XP_010653924.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Vitis vinifera])

HSP 1 Score: 52.8 bits (125), Expect = 2.3e-03
Identity = 24/61 (39.34%), Postives = 34/61 (55.74%), Query Frame = 1

Query: 288 DGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWS 347
           +G FL T+S    AK+WS    + V    GH  +VT +  +    C+AT S DRT +LWS
Sbjct: 505 EGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWS 564

Query: 348 A 349
           +
Sbjct: 565 S 565


HSP 2 Score: 850.5 bits (2196), Expect = 1.6e-243
Identity = 426/541 (78.74%), Postives = 463/541 (85.58%), Query Frame = 1

Query: 4    DDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPT---PIIRP 63
            DDQ P ST   +P  LP             +QP   S++PP IVP IAPIP+   PI+RP
Sbjct: 533  DDQTPVSTIDPTP--LPA------------MQPIIPSLVPPPIVPPIAPIPSVSAPILRP 592

Query: 64   LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 123
            LAPLP RPP+ RP + QNGEMR SDSDS+ D+   ++ A GS  EYE+SEESRQ RERQE
Sbjct: 593  LAPLPVRPPVLRPPLPQNGEMRASDSDSDRDDSGRAQAASGSAVEYEISEESRQFRERQE 652

Query: 124  KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 183
            KA QEFLMKRRASALAVPTNDMAVR RLRRLGEPITLFGEREMERRDRLR IMA+LDAEG
Sbjct: 653  KAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMIMAKLDAEG 712

Query: 184  QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 243
            QLEKLMK HEEEEAAA    EE EEE LQYPFYTEGSK+LL+AR++IAKYSI RAASRL 
Sbjct: 713  QLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKSLLEARVEIAKYSIKRAASRLY 772

Query: 244  RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 303
            RA+RKRDDPDED++AEMDW L++AGSLVLDCSEIGDDRPLSGCSFS DGK LA  +LSGV
Sbjct: 773  RARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSGCSFSHDGKLLAACALSGV 832

Query: 304  AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 363
            AK+WSMPQV KVS  KGHTER TDV FSP    LATASADRTARLW++EGSLLKTFEGHL
Sbjct: 833  AKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRTARLWNSEGSLLKTFEGHL 892

Query: 364  DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 423
            DRLARIAFHPSGKYLGT SFDKTWRLWD+ETG ELLLQEGHSRSVYGI+FH DGSL +SC
Sbjct: 893  DRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGISFHRDGSLAASC 952

Query: 424  GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 483
            GLDAL RVWDLR+GRS+LALEGHVKPVLG+ FSPNGYHLATG EDNTCRIWDLRKKKSLY
Sbjct: 953  GLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATGAEDNTCRIWDLRKKKSLY 1012

Query: 484  IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISG 542
            +IPAHSNLVSQVK+EPQEGYFLVTAS+DMTAK+WSARDFKPVKTLSGHEAKVTSLDI   
Sbjct: 1013 VIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDITED 1059

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PRP4L_ARATH1.8e-19766.99U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana ... [more]
PRP4_BOVIN1.1e-10946.40U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1[more]
PRP4_HUMAN1.1e-10946.40U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2[more]
PRP4_PONAB1.1e-10946.40U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1[more]
PRP4_MOUSE1.8e-10946.40U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KHD8_CUCSA8.9e-30597.41Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404170 PE=4 SV=1[more]
A0A0A0KHD8_CUCSA3.2e-0435.71Uncharacterized protein OS=Cucumis sativus GN=Csa_6G404170 PE=4 SV=1[more]
F6HLM8_VITVI1.6e-24577.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05930 PE=4 SV=... [more]
F6HLM8_VITVI1.6e-0339.34Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05930 PE=4 SV=... [more]
A5ATG0_VITVI1.6e-0339.34Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016440 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449458027|ref|XP_004146749.1|1.3e-30497.41PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sati... [more]
gi|449458027|ref|XP_004146749.1|4.6e-0435.71PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sati... [more]
gi|659129524|ref|XP_008464716.1|1.3e-0335.71PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo... [more]
gi|731400356|ref|XP_010653924.1|2.3e-24577.55PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Vitis vinife... [more]
gi|731400356|ref|XP_010653924.1|2.3e-0339.34PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Vitis vinife... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR014906PRP4-like
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR020472G-protein_beta_WD-40_rep
IPR027106Prp4
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
biological_process GO:0008150 biological_process
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005575 cellular_component
cellular_component GO:0046540 U4/U6 x U5 tri-snRNP complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0030621 U4 snRNA binding
molecular_function GO:0017070 U6 snRNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU61227watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021890Cla021890.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU61227WMU61227transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 399..430
score: 5.3E-4coord: 312..347
score: 1.0E-4coord: 350..388
score: 1.4E-4coord: 437..472
score: 5.
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 264..305
score: 0.014coord: 518..554
score: 210.0coord: 475..515
score: 2.1E-4coord: 391..430
score: 2.5E-6coord: 433..472
score: 4.4E-11coord: 308..347
score: 1.3E-8coord: 349..388
score: 1.
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 398..439
score: 14.251coord: 440..481
score: 16.958coord: 482..524
score: 11.879coord: 315..347
score: 13.516coord: 356..397
score: 13
IPR014906Pre-mRNA processing factor 4 (PRP4)-likePFAMPF08799PRP4coord: 144..171
score: 9.1
IPR014906Pre-mRNA processing factor 4 (PRP4)-likeSMARTSM00500pr04_2coord: 139..192
score: 5.3
IPR014906Pre-mRNA processing factor 4 (PRP4)-likeunknownSSF158230PRP4-likecoord: 121..177
score: 7.45
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 275..539
score: 1.0
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 273..535
score: 55
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 274..543
score: 5.5
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 459..473
score: -coord: 375..389
score: -coord: 417..431
scor
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 334..348
score: 3.9E-6coord: 459..473
score: 3.9E-6coord: 375..389
score: 3.
IPR027106U4/U6 small nuclear ribonucleoprotein Prp4PANTHERPTHR19846WD40 REPEAT PROTEINcoord: 4..541
score: 3.1E
NoneNo IPR availableunknownCoilCoilcoord: 175..195
scor
NoneNo IPR availablePANTHERPTHR19846:SF0U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP4coord: 4..541
score: 3.1E