Carg21914 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21914
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	U4/U6 small nuclear ribonucleoprotein PRP4-like protein
Location	Cucurbita_argyrosperma_scaffold_111 : 439475 .. 444691 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGCCCAGTCCCCACCCCGTTCATCTTCCTCGCTCTCTCCTGGAGTGCTCCATCTCTTCTTCACGCCGGTTCCTCCCTTTCAGCAGCTCCGCGCCGCCGCTGTCGTCACCGTTCTTTTTCTTCCTGCTCGCCCCTCCTCCTCTCAATTTGTTACTGGTGTCTGTCTGACATTCCCGTCGTCCCAAATCGGACAGAGTTCACCTGTCGACGAGGACAAGACTGCACCATCTCCGGCGGCTGGGAATGCTGTTCTGACGGTACACATCCTTTGCTAGATCCGAATCTCCCTCCATTTCTCTCATTCTCTTTCTCTCTCTGTTAACTTTAGCTATTTCATTTCACTCTCTTGATTGGCCTATTCTGGTGCCGTAGCAGTGATGATTCTTTTTTCCTACTCGTGTTATTACTGCAAACATGATAAGAGAAATTTGTGTTTGTAAGTAAAACTATGGGAGTCTAGAAGTTGTGTATTGCAGTGTCGTGTTCAGAGTAGGAAAGAGGGATTTTATTTCTATTTTCGTGATTTGTATCTGTCTTCAAGTACATGTTCGATAATCTATTACGAAGACGATGCAGTCTCAACTATTACTTCCTACTTTCTTCATGATTAGTTTGATTTTTCACATTCCTTTACTTTTGGAGGTTTTCAGTAAACGATGAAATTCACGTTTTACTATCTATGATCGGCTTTATATCTCACGTTTGTTATATTAACTAATTTTTAGGGGCTTGATTGTAGAGAAAGAATGAAAAAAAGAGCTTAATATCTGGGATAAGCTTGTTTTGTTTAGAAGTTTCATTTACGAGCTATCATGGATGTTGATGATCAAAACCCTGCATCAACTGCTGCTGAATCTCCTGAAATCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATGCAACCTGCAGCTACAACAGTTATTCCATCTTCAATTGTGCCTTCCATTGCTCCCATCCCCCCTCCTCTAATTACACGTCCATTGGCTCCTCTTCCGAGCCGGCCTCTCCTCTTCAGGCCCCCTGTAGCACAAAATGGGGAGATGAGAACAAGTGACTCTGACTCGGAACACGATGAATTGGCTCCTTCCCGTGCGACTCAAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGAGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGCCGTGCTTCTGCTCTAGCAGTACCTACTAATGACATGGCTGTTCGAGCCCGTCTTCGTCGTCTTGGTGAACCCATAACTCTTTTTGGAGAAAGAGAAATGGAAAGGCGGGATAGGTTGCGATCAATAATGGCACGTTTAGATGCTGAAGGGCAATTAGAGAAGCTGTTGAAAGTTCATGAAGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAAGAAGTGCTTCAGTATCCTTTTTATACTGAGGGGCCCAAGGCTCTCTTGGATGCAAGAATTGATATTGCAAAATATTCGTCGTAAGAGCAGCTTCACGTCTTGAGCGTGCTAAGAGGAAAAGGGATGATCCAGATGAAGATGTGGAAGCTGAAATGGATTGGGCTCTGAGACAGGCTGAAAGTTTGGTTCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGCTCTTTCTCGTCTGATGGAAAATTCCTTGCCACTAGGTAACCTTCATGTATTTGCAGTTACTAACTAATACCAGTTTCTCCTCTTCAATATCATCCCCATTTTACCTACTGATAGATGAAAAAAGAAACAGAAGGAAAAAGAAAAAGAAAATAGAAAAGTTGATTGTGGCTATAGATTAACTGTTATCCTCCTACTTAACCATAATTTAACGTATGATTGAAGGTTTTTTCATTTTCCACTCCATTACTTGATAGGCTTTGTATTTAGCTTTCGTTTTACTTTTCTGCTGAAAGTTTTCGTCTATGTGATGCTTTTTGTATTTTTCTTGTTTAATTTCTTTAGTTCATTAAGTGGAGTTGCGAAAATGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAATGGACACACAGAGCGGGTTACTGATGTAATATTTTCTCCAGTGAACGAGTGTTTAGCAACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGGTCTCTCCTTAGAACATTTGAGGGCCATCTGGACCGCCTTGCACGGATTGCCTTCCACCCATCAGGTAAGTACTTGGGCACCACTAGCTTCGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTGCTTCTTCAAGAAGGTCATAGTAGAAGTGTTTATGGCATAGACTTCCACCATGATGGATCTTTAGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGACCTTCGAACTGGTAGAAGTGTTCTTGCCTTAGAAGGCCACGTCAAGCCAGTAAATCTCTTTCCTTTCTTACATTGGGATCGTACATTTATTTTTAATAAATTTCACTTGTTTGTTCCTGACTGATACCTTGCTTTCATCAGGTCCTTGGAGTTAATTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGTGAAGATAACACCTGTCGGATATGGGATTTGAGGAAGAAAAGATCTCTTTATATAATACCTGCACACTCAAACCTTATTTCACAGGTGAAATATGAGCCTCAAGAAGGATACTTCTTGGTAACTGCATCATTTGATATGACTGCAAAGGTATTTTTGAACACTTCAGGATGATATATTATCGTTCAAGACGTTATGTTTTCATTTGGTTGTTGCTTCCTCTCACTTTAGTCAAAGGCTTCACTTTTTAATCTTTTTTTTTTTTTTTTTTTTGCAGATTTGGTCTGCTCGTGATTTTAAGCCTGTGAAGACACTCTCTGGCCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGGTTAGTTATTTATCAACTCCTTGGTCATTATTAGTATTACTATTATTTACAAATATTACCACCTAGGTTATTGTTGCACACCATTTTGCATTCTTCTATGGTATTTTCCACACGCCTGTATTTAGCATAAACTTGAGTTCATAGATATCACTAATGTCTCAGACTACCTTGGGGGGTGAGTGAAAGGTACAATCATGCAAGAAACTATACCTTATGCTGCTGTACGTTCTTTGCTTGGAGTAACACCTGATAGATTGTTTTCTATGGGAAAGCTTTTTTAACAATCTCAATTTTTCTAGCATGGAGTTGTTTCCTTCAGCTCTATTGTAAGGAATTGATGACATAGACACTAGTTACGTACATGTTTTTATAAAATTCAATGTCAATAATTTTCTTGGTAAAATAAACTAATGTGCTTGAAAAGCATTTCAGAATGTAAGTAAGGATGATAATCTGGTAGGTTTGATGACGTTTGTCCTGCCTGTATCTACAAGATAGAATGTGGCTGGGGTTTCCAGATTGCAAAAACCCAAAAACTATTATCACTAATTTAGTCTGCCTTTGAAGTTGTCCCTCCCATGTTCTTTCTGGCTGTTGATATCCCGATTAGAATTGAATTCTACTTGAGAGGGGTAGGGGGGACATCCTTGGGTGGTTTGAGGCGGGGAGGTATGGGAAGGGATAATGTCTTACTGTCCCACAGTCGGTTTTCTGATGGCACGACCTTCTTTTATTGATACGGGGTAGCGCCAATTGTTTGTCTAAACTATATCCTGTGCCTTTTGAAGGCTATGTCTGGTTTGAAGATTAACAAAAGCATGTGTCATTTGAAATACAAGAGTCTTTTCAAGTATATACAATTCTTTTATTTGTTTTTGTGATCTTGTACAGTTCACAGTCACTAATTTCTTTTTTTTGTAATTTCTCCACTCTCTTCTTCAACTTAGATTGGAAGATTTCTTTCAAATTTTAGAATCTTGTATTTTTTTGAGGGGCACATTTTCATGGAGAGAAATGAAAGAATTTACAAAAGCATACCAAAAAAGGAGAGCCCTAACAAAAAAATTACAGTCTTGACCCCTAACTACAAAAATGGACTCCAATTCAAAAGAACAAGATCAAAGTCACAAGTACAAAAAGAATCTGGTTACTGACGCCTATATGGGGAATTAAACCTAGTCACCTTCAAACTTACCTGGTCTCTCCACCTCTCCAAAATTCTATTATTCCTTTTAAGCTAAATTTCCCACAAAACTTCTAAGAAACTAGTCAACCACAAAATTTTACCCTTCCCCTGAAGAGAGAACTCAAAAGCACTTCTTCCAACTCAACCTTGCTATCTCCATTCCAAGCCCAACAAACACCAAACGATCTCAGCCAACCACTCCAAAGTTGGTGAGTGAACTGAGAGTTCCAAAACAAATGATCTAGGTCTTCCTCATATCTCATACAAAGAATTTACCATTGTGGGAACAAAACATTGGAAAAGTGCCTTTGAACACAGTCATTGGTACTAAGGCTTTAGGAAATTATGGACAACTTTTTTTGTGACGAGTAAAACGTTAGAATGTGTTTGAATAGAATTTGCTTGTGTGTATTACTTCAACCATAAAAGAGTTCATCCATTTTTCTTTTGTTTTAATGTGAATGGTTACCCAATGCATCATTAACACTAAGAGTCCTCAGTAAGCTTATAGATTGTATGCTGAAAATACTTTAAGGAATTTGATTATGTTGTATACACCTTCTCTTGGGTTTGAATGATGGACGTCTGCCGCTGATATCCAATTATTGTTTTGTTCAATAACAGATGGACAGTGTATTGCAACTGTCTCACACGATCGGACCATAAAGCTCTGGTCTGTCAATAGCAAAGATGAACAAACTATGGACGTTGATCGAGTTTCGTAGCACCGACATGGGGGAGACGTTTCGAAAGCTCTGCAGGCTCATGTGGAGGTAAAGGAGATAAAAGAGGTTGGATCAGATGATGTCCCTTCTTTCTAATCATGTAATATCATGTATCTGATTGAATGCTGAATAGCGAGTTAATTTAGGCCACAAAGAAAATCTTGTGCTGACAATTTTCATGTTAATTGAGGGTTTTAAAACTTTAGATCCAAAAGAGAAATGAAGATCCAATATTAAGACCAAAACTTAAACCATACAAAATGATACAAAACGTTGAAAGGTATGCTGTTGAATTTTGCTCCATAGGAGATTAGAAGTGTCAACATTTTATAAGGATGACTATTATA

mRNA sequence

TGTGCCCAGTCCCCACCCCGTTCATCTTCCTCGCTCTCTCCTGGAGTGCTCCATCTCTTCTTCACGCCGGTTCCTCCCTTTCAGCAGCTCCGCGCCGCCGCTGTCGTCACCGTTCTTTTTCTTCCTGCTCGCCCCTCCTCCTCTCAATTTGTTACTGGTGTCTGTCTGACATTCCCGTCGTCCCAAATCGGACAGAGTTCACCTGTCGACGAGGACAAGACTGCACCATCTCCGGCGGCTGGGAATGCTGTTCTGACGAAGTTTCATTTACGAGCTATCATGGATGTTGATGATCAAAACCCTGCATCAACTGCTGCTGAATCTCCTGAAATCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATGCAACCTGCAGCTACAACAGTTATTCCATCTTCAATTGTGCCTTCCATTGCTCCCATCCCCCCTCCTCTAATTACACGTCCATTGGCTCCTCTTCCGAGCCGGCCTCTCCTCTTCAGGCCCCCTGTAGCACAAAATGGGGAGATGAGAACAAGTGACTCTGACTCGGAACACGATGAATTGGCTCCTTCCCGTGCGACTCAAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGAGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGCCGTGCTTCTGCTCTAGCAGTACCTACTAATGACATGGCTGTTCGAGCCCGTCTTCGTCGTCTTGGTGAACCCATAACTCTTTTTGGAGAAAGAGAAATGGAAAGGCGGGATAGGTTGCGATCAATAATGGCACGTTTAGATGCTGAAGGGCAATTAGAGAAGCTGTTGAAAGTTCATGAAGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAAGAAGTGCTTCAGTATCCTTTTTATACTGAGGGGCCCAAGGCTCTCTTGGATGCAAGAATTGATATTGCAAAATATTCGTCAGCAGCTTCACGTCTTGAGCGTGCTAAGAGGAAAAGGGATGATCCAGATGAAGATGTGGAAGCTGAAATGGATTGGGCTCTGAGACAGGCTGAAAGTTTGGTTCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGCTCTTTCTCGTCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCGAAAATGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAATGGACACACAGAGCGGGTTACTGATGTAATATTTTCTCCAGTGAACGAGTGTTTAGCAACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGGTCTCTCCTTAGAACATTTGAGGGCCATCTGGACCGCCTTGCACGGATTGCCTTCCACCCATCAGGTAAGTACTTGGGCACCACTAGCTTCGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTGCTTCTTCAAGAAGGTCATAGTAGAAGTGTTTATGGCATAGACTTCCACCATGATGGATCTTTAGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGACCTTCGAACTGGTAGAAGTGTTCTTGCCTTAGAAGGCCACGTCAAGCCAGTCCTTGGAGTTAATTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGTGAAGATAACACCTGTCGGATATGGGATTTGAGGAAGAAAAGATCTCTTTATATAATACCTGCACACTCAAACCTTATTTCACAGGTGAAATATGAGCCTCAAGAAGGATACTTCTTGGTAACTGCATCATTTGATATGACTGCAAAGATTTGGTCTGCTCGTGATTTTAAGCCTGTGAAGACACTCTCTGGCCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATGGACAGTGTATTGCAACTGTCTCACACGATCGGACCATAAAGCTCTGGTCTGTCAATAGCAAAGATGAACAAACTATGGACGTTGATCGAGTTTCGTAGCACCGACATGGGGGAGACGTTTCGAAAGCTCTGCAGGCTCATGTGGAGGTAAAGGAGATAAAAGAGGTTGGATCAGATGATGTCCCTTCTTTCTAATCATGTAATATCATGTATCTGATTGAATGCTGAATAGCGAGTTAATTTAGGCCACAAAGAAAATCTTGTGCTGACAATTTTCATGTTAATTGAGGGTTTTAAAACTTTAGATCCAAAAGAGAAATGAAGATCCAATATTAAGACCAAAACTTAAACCATACAAAATGATACAAAACGTTGAAAGGTATGCTGTTGAATTTTGCTCCATAGGAGATTAGAAGTGTCAACATTTTATAAGGATGACTATTATA

Coding sequence (CDS)

TGTGCCCAGTCCCCACCCCGTTCATCTTCCTCGCTCTCTCCTGGAGTGCTCCATCTCTTCTTCACGCCGGTTCCTCCCTTTCAGCAGCTCCGCGCCGCCGCTGTCGTCACCGTTCTTTTTCTTCCTGCTCGCCCCTCCTCCTCTCAATTTGTTACTGGTGTCTGTCTGACATTCCCGTCGTCCCAAATCGGACAGAGTTCACCTGTCGACGAGGACAAGACTGCACCATCTCCGGCGGCTGGGAATGCTGTTCTGACGAAGTTTCATTTACGAGCTATCATGGATGTTGATGATCAAAACCCTGCATCAACTGCTGCTGAATCTCCTGAAATCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATGCAACCTGCAGCTACAACAGTTATTCCATCTTCAATTGTGCCTTCCATTGCTCCCATCCCCCCTCCTCTAATTACACGTCCATTGGCTCCTCTTCCGAGCCGGCCTCTCCTCTTCAGGCCCCCTGTAGCACAAAATGGGGAGATGAGAACAAGTGACTCTGACTCGGAACACGATGAATTGGCTCCTTCCCGTGCGACTCAAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGAGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGCCGTGCTTCTGCTCTAGCAGTACCTACTAATGACATGGCTGTTCGAGCCCGTCTTCGTCGTCTTGGTGAACCCATAACTCTTTTTGGAGAAAGAGAAATGGAAAGGCGGGATAGGTTGCGATCAATAATGGCACGTTTAGATGCTGAAGGGCAATTAGAGAAGCTGTTGAAAGTTCATGAAGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAAGAAGTGCTTCAGTATCCTTTTTATACTGAGGGGCCCAAGGCTCTCTTGGATGCAAGAATTGATATTGCAAAATATTCGTCAGCAGCTTCACGTCTTGAGCGTGCTAAGAGGAAAAGGGATGATCCAGATGAAGATGTGGAAGCTGAAATGGATTGGGCTCTGAGACAGGCTGAAAGTTTGGTTCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGCTCTTTCTCGTCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCGAAAATGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAATGGACACACAGAGCGGGTTACTGATGTAATATTTTCTCCAGTGAACGAGTGTTTAGCAACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGGTCTCTCCTTAGAACATTTGAGGGCCATCTGGACCGCCTTGCACGGATTGCCTTCCACCCATCAGGTAAGTACTTGGGCACCACTAGCTTCGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTGCTTCTTCAAGAAGGTCATAGTAGAAGTGTTTATGGCATAGACTTCCACCATGATGGATCTTTAGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGACCTTCGAACTGGTAGAAGTGTTCTTGCCTTAGAAGGCCACGTCAAGCCAGTCCTTGGAGTTAATTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGTGAAGATAACACCTGTCGGATATGGGATTTGAGGAAGAAAAGATCTCTTTATATAATACCTGCACACTCAAACCTTATTTCACAGGTGAAATATGAGCCTCAAGAAGGATACTTCTTGGTAACTGCATCATTTGATATGACTGCAAAGATTTGGTCTGCTCGTGATTTTAAGCCTGTGAAGACACTCTCTGGCCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATGGACAGTGTATTGCAACTGTCTCACACGATCGGACCATAAAGCTCTGGTCTGTCAATAGCAAAGATGAACAAACTATGGACGTTGATCGAGTTTCGTAG

Protein sequence

CAQSPPRSSSSLSPGVLHLFFTPVPPFQQLRAAAVVTVLFLPARPSSSQFVTGVCLTFPSSQIGQSSPVDEDKTAPSPAAGNAVLTKFHLRAIMDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITRPLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSSAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSLYIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDEQTMDVDRVS

Homology

[Close]

BLAST of Carg21914 vs. NCBI nr
Match: XP_022946187.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita moschata])

HSP 1 Score: 660.2 bits (1702), Expect = 7.3e-186
Identity = 570/573 (99.48%), Postives = 570/573 (99.48%), Query Frame = 0


Query: 94  MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 153
           MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 60

Query: 154 XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 213
           XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ
Sbjct: 61  XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 214 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 273
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 274 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRL 333
           GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS   AASRL
Sbjct: 181 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYSVVRAASRL 240

Query: 334 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 393
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 394 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX 453
           VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX 360

Query: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 513
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 420

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 574 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS 633
           XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS 540

Query: 634 DGQCIATVSHDRTIKLWSVNSKDEQTMDVDRVS 665
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVDRVS
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVDRVS 573

[Close]

BLAST of Carg21914 vs. NCBI nr
Match: XP_023525233.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 650.2 bits (1676), Expect = 7.6e-183
Identity = 564/570 (98.95%), Postives = 565/570 (99.12%), Query Frame = 0


Query: 94  MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 153
           MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 60

Query: 154 XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 213
           XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ
Sbjct: 61  XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 214 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 273
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 274 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRL 333
           GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS   AA+RL
Sbjct: 181 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYSIVRAAARL 240

Query: 334 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 393
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 394 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX 453
           VAKMWSMPQVRKVSNF GHTERVTDVIFSPVNECLATASADRTARLWS EGSLLXXXXXX
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSTEGSLLXXXXXX 360

Query: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 513
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 420

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 574 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS 633
           XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS 540

Query: 634 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 662
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Carg21914 vs. NCBI nr
Match: XP_022999661.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima])

HSP 1 Score: 627.9 bits (1618), Expect = 4.0e-176
Identity = 555/570 (97.37%), Postives = 556/570 (97.54%), Query Frame = 0


Query: 94  MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 153
           MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 60

Query: 154 XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 213
           XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ
Sbjct: 61  XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 214 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 273
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 274 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRL 333
           GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS   AASRL
Sbjct: 181 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 334 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 393
           ERAKRKRDDPDEDVEAEMDWALRQAESL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 394 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX 453
           VAKMWSMPQVRKVSNF GHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX 360

Query: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 513
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 420

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 574 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS 633
           XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXX          EAKVTSLDIIS
Sbjct: 481 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKVTSLDIIS 540

Query: 634 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 662
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Carg21914 vs. NCBI nr
Match: XP_004146749.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >KGN47802.1 hypothetical protein Csa_6G404170 [Cucumis sativus])

HSP 1 Score: 550.8 bits (1418), Expect = 6.2e-153
Identity = 514/570 (90.18%), Postives = 524/570 (91.93%), Query Frame = 0


Query: 94  MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 153
           M++DDQNPASTAAESPE LPGGENE+LDNPAEP QPAAT+VIP                X
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPXXXXXXXXXXXXXXXXX 60

Query: 154 XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 213
           XXXXXX    LFRPPV QNGE+RTSDSDSEHDELAPSR   GSTAEYE+SEESRQ RER 
Sbjct: 61  XXXXXXRPP-LFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERH 120

Query: 214 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 273
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 274 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRL 333
           GQLEKL+KVH XXXXXXXXXXXXXXXXVLQYPFYTEG KALLDARIDIAKYS   A+SRL
Sbjct: 181 GQLEKLMKVHEXXXXXXXXXXXXXXXXVLQYPFYTEGSKALLDARIDIAKYSILRASSRL 240

Query: 334 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 393
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 394 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX 453
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPVNECLATASADRTARLWSAEGSLLXXXXXX
Sbjct: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLXXXXXX 360

Query: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 513
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 420

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 574 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS 633
           XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXX           AKVTSLDIIS
Sbjct: 481 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVTSLDIIS 540

Query: 634 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 662
           DGQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDIQTMDVD 569

[Close]

BLAST of Carg21914 vs. NCBI nr
Match: XP_008464716.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903247.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903248.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903249.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo])

HSP 1 Score: 545.0 bits (1403), Expect = 3.4e-151
Identity = 508/570 (89.12%), Postives = 521/570 (91.40%), Query Frame = 0


Query: 94  MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 153
           M++DDQNPASTAAESPE LPGGENE+LDNPAEP QPAAT+VIP                X
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPXXXXXXXXXXXXXXXXX 60

Query: 154 XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 213
           XXXXXX    LFRPPV QNGE+RTSDSDSEHDELAP+R   GSTAEYE+SEESRQ RER 
Sbjct: 61  XXXXXXRPP-LFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERH 120

Query: 214 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 273
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 274 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRL 333
           GQLEKL+KVH XXXXXXXXXXXXXXXXVLQYPFYTEG KALLDARIDIAKYS   A+SRL
Sbjct: 181 GQLEKLMKVHEXXXXXXXXXXXXXXXXVLQYPFYTEGSKALLDARIDIAKYSILRASSRL 240

Query: 334 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 393
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 394 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX 453
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPVNECLATASADRTARLWS EGS  XXXXXX
Sbjct: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSXXXXXXXX 360

Query: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 513
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GVELLLXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGVELLLXXXXXXXXXXXXXXXXXXXXXX 420

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 574 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS 633
           XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXX           AKVTSLDIIS
Sbjct: 481 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVTSLDIIS 540

Query: 634 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 662
           DGQCIATVSHDRTIKLWSVNSKD+QTMD+D
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDKQTMDID 569

[Close]

BLAST of Carg21914 vs. TAIR10
Match: AT2G41500.1 (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related)

HSP 1 Score: 317.0 bits (811), Expect = 2.8e-86
Identity = 335/499 (67.13%), Postives = 382/499 (76.55%), Query Frame = 0


Query: 171 QNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALA 230
           QNG ++TSDSDSE D+              E+SEES+QVRERQEKA+Q+ L+KRRA+A+A
Sbjct: 70  QNGGVKTSDSDSESDD-----------EHIEISEESKQVRERQEKALQDLLVKRRAAAMA 129

Query: 231 VPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLLKVHXXXXXXX 290
           VPTND AVR RLRRLGEPITLFGE+EMERR RL  ++ R D  GQL+KL+K H       
Sbjct: 130 VPTNDKAVRDRLRRLGEPITLFGEQEMERRARLTQLLTRYDINGQLDKLVKDH----EED 189

Query: 291 XXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRLERAKRKRDDPDEDVEAE 350
                     VL+YPF+TEGPK L +ARI+IAK+S   AA R++RAKR+RDDPDED++AE
Sbjct: 190 VTPKEEVDDEVLEYPFFTEGPKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAE 249

Query: 351 MDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQV-RKVSNF 410
             WAL+ A+ + LDCS  GDDRPL+GCSFS DGK LAT SLSGV K+W MPQV   ++  
Sbjct: 250 TKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVL 309

Query: 411 NGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXXXXXXXXXXXXXXXXXX 470
             H ER TDV+FSPV++CLATASADRTA+LW  +G+LL  XXXXXXXXXXXXXXXXXXXX
Sbjct: 310 KDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTXXXXXXXXXXXXXXXXXXXX 369

Query: 471 XXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 530
           XXXXXXXXXXXXX   G EL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 370 XXXXXXXXXXXXXINTGAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 429

Query: 531 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 590
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 489

Query: 591 XQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKL 650
           X                      F  VK+L+GHE+KV SLDI +D  CIATVSHDRTIKL
Sbjct: 490 XXXGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKL 549

Query: 651 WSVNSKDE-----QTMDVD 662
           W+ +  D+     +TMD+D
Sbjct: 550 WTSSGNDDEDEEKETMDID 553

[Close]

BLAST of Carg21914 vs. TAIR10
Match: AT2G05720.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 7.1e-34
Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 310 GPKALLDARIDIAK--YSSAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIG 369
           GP  L +ARI+I K     AA R++R  R+R+DPDED  AE   AL+  + +VL  S+ G
Sbjct: 2   GPTELREARIEITKDFIKRAALRIQRENRRRNDPDEDKNAETKLALKHCKDMVLGSSKFG 61

Query: 370 DDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQV-RKVSNFNGHTERVTDVIFSPV-NEC 429
           DDRPL+GCS S DGK L T SLSGV K+W +PQV  K+    GH E VTDV+FS V +EC
Sbjct: 62  DDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDEC 121

Query: 430 LATASADRTARLWSAEGSLL 446
           LATAS DRT ++W  +G+LL
Sbjct: 122 LATASTDRTEKIWKTDGTLL 141

[Close]

BLAST of Carg21914 vs. TAIR10
Match: AT4G32551.2 (LisH dimerisation motif;WD40/YVTN repeat-like-containing domain)

HSP 1 Score: 56.2 bits (134), Expect = 8.8e-08
Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 0


Query: 339 DDPDEDVEAEMDWALRQAESLVLDCS------EIGDDR----PLSGCSFSSDGKFLATSS 398
           DD  E   ++ D   R A +  +D S      E+   R     ++ C FSSDGK LA++ 
Sbjct: 649 DDNVESFLSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAG 708

Query: 399 LSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAE 442
               A +W    ++  +    HT  +TD+ FSP    LAT+S D+T R+W A+
Sbjct: 709 HDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDAD 761

[Close]

BLAST of Carg21914 vs. TAIR10
Match: AT2G32700.7 (LEUNIG_homolog)

HSP 1 Score: 51.6 bits (122), Expect = 2.2e-06
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 375 CSFSSDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRT 434
           CSFS DGK LA++       +W+M  ++  S    H   +TDV F P +  LAT+S D+T
Sbjct: 535 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKT 594

Query: 435 ARLWSA 441
            ++W A
Sbjct: 595 IKIWDA 600

[Close]

BLAST of Carg21914 vs. TAIR10
Match: AT2G33340.1 (MOS4-associated complex 3B)

HSP 1 Score: 47.0 bits (110), Expect = 5.3e-05
Identity = 27/78 (34.62%), Postives = 39/78 (50.00%), Query Frame = 0


Query: 364 SEIGDDR---PLSGCSFSSDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFS 423
           +++ DD      +  +F  DG  L T +   V K+W +     V+ F+GHT  VT + FS
Sbjct: 345 AQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS 404

Query: 424 PVNECLATASADRTARLW 439
                LATA+ D   RLW
Sbjct: 405 ENGYFLATAAED-GVRLW 421

[Close]

BLAST of Carg21914 vs. Swiss-Prot
Match: sp|O22212|PRP4L_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana OX=3702 GN=LIS PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.0e-85
Identity = 335/499 (67.13%), Postives = 382/499 (76.55%), Query Frame = 0


Query: 171 QNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALA 230
           QNG ++TSDSDSE D+              E+SEES+QVRERQEKA+Q+ L+KRRA+A+A
Sbjct: 70  QNGGVKTSDSDSESDD-----------EHIEISEESKQVRERQEKALQDLLVKRRAAAMA 129

Query: 231 VPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLLKVHXXXXXXX 290
           VPTND AVR RLRRLGEPITLFGE+EMERR RL  ++ R D  GQL+KL+K H       
Sbjct: 130 VPTNDKAVRDRLRRLGEPITLFGEQEMERRARLTQLLTRYDINGQLDKLVKDH----EED 189

Query: 291 XXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRLERAKRKRDDPDEDVEAE 350
                     VL+YPF+TEGPK L +ARI+IAK+S   AA R++RAKR+RDDPDED++AE
Sbjct: 190 VTPKEEVDDEVLEYPFFTEGPKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAE 249

Query: 351 MDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQV-RKVSNF 410
             WAL+ A+ + LDCS  GDDRPL+GCSFS DGK LAT SLSGV K+W MPQV   ++  
Sbjct: 250 TKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVL 309

Query: 411 NGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXXXXXXXXXXXXXXXXXX 470
             H ER TDV+FSPV++CLATASADRTA+LW  +G+LL  XXXXXXXXXXXXXXXXXXXX
Sbjct: 310 KDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTXXXXXXXXXXXXXXXXXXXX 369

Query: 471 XXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 530
           XXXXXXXXXXXXX   G EL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 370 XXXXXXXXXXXXXINTGAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 429

Query: 531 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 590
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 489

Query: 591 XQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKL 650
           X                      F  VK+L+GHE+KV SLDI +D  CIATVSHDRTIKL
Sbjct: 490 XXXGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKL 549

Query: 651 WSVNSKDE-----QTMDVD 662
           W+ +  D+     +TMD+D
Sbjct: 550 WTSSGNDDEDEEKETMDID 553

[Close]

BLAST of Carg21914 vs. Swiss-Prot
Match: sp|O43172|PRP4_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 2.8e-27
Identity = 96/223 (43.05%), Postives = 131/223 (58.74%), Query Frame = 0


Query: 201 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 260
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 71  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 130

Query: 261 DRLRSIMARLDAEGQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARID 320
           +RLR+I++ +  +  L+K          XXXXXXXXXXXX  Q  +Y EGP +L  AR+ 
Sbjct: 131 ERLRNILSVVGTDA-LKK---------TXXXXXXXXXXXXXYQQTWYHEGPNSLKVARLW 190

Query: 321 IAKYS--SAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 380
           IA YS   A  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 191 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 250

Query: 381 SDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSP 422
            + K LAT+  SG+ K+WS+P    +    GH   V  ++F P
Sbjct: 251 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHP 283

[Close]

BLAST of Carg21914 vs. Swiss-Prot
Match: sp|Q5NVD0|PRP4_PONAB (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.8e-27
Identity = 96/223 (43.05%), Postives = 131/223 (58.74%), Query Frame = 0


Query: 201 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 260
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 261 DRLRSIMARLDAEGQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARID 320
           +RLR+I++ +  +  L+K          XXXXXXXXXXXX  Q  +Y EGP +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA-LKK---------TXXXXXXXXXXXXXYQQTWYHEGPNSLKVARLW 189

Query: 321 IAKYS--SAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 380
           IA YS   A  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRASQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 381 SDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSP 422
            + K LAT+  SG+ K+WS+P    +    GH   V  ++F P
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHP 282

[Close]

BLAST of Carg21914 vs. Swiss-Prot
Match: sp|Q3MHE2|PRP4_BOVIN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.6e-27
Identity = 96/223 (43.05%), Postives = 131/223 (58.74%), Query Frame = 0


Query: 201 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 260
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 261 DRLRSIMARLDAEGQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARID 320
           +RLR+I++ +  +  L+K          XXXXXXXXXXXX  Q  +Y EGP +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA-LKK---------TXXXXXXXXXXXXXYQQTWYHEGPHSLKVARLW 189

Query: 321 IAKYS--SAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 380
           IA YS   A  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 381 SDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSP 422
            + K LAT+  SG+ K+WS+P    +    GH   V  ++F P
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHP 282

[Close]

BLAST of Carg21914 vs. Swiss-Prot
Match: sp|Q9DAW6|PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.6e-27
Identity = 96/223 (43.05%), Postives = 131/223 (58.74%), Query Frame = 0


Query: 201 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 260
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 261 DRLRSIMARLDAEGQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARID 320
           +RLR+I++ +  +  L+K          XXXXXXXXXXXX  Q  +Y EGP +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA-LKK---------TXXXXXXXXXXXXXYQQTWYHEGPNSLKVARLW 189

Query: 321 IAKYS--SAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 380
           IA YS   A  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 381 SDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSP 422
            + K LAT+  SG+ K+WS+P    +    GH   V  ++F P
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHP 282

[Close]

BLAST of Carg21914 vs. TrEMBL
Match: tr|A0A0A0KHD8|A0A0A0KHD8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404170 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 4.1e-153
Identity = 514/570 (90.18%), Postives = 524/570 (91.93%), Query Frame = 0


Query: 94  MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 153
           M++DDQNPASTAAESPE LPGGENE+LDNPAEP QPAAT+VIP                X
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPXXXXXXXXXXXXXXXXX 60

Query: 154 XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 213
           XXXXXX    LFRPPV QNGE+RTSDSDSEHDELAPSR   GSTAEYE+SEESRQ RER 
Sbjct: 61  XXXXXXRPP-LFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERH 120

Query: 214 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 273
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 274 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRL 333
           GQLEKL+KVH XXXXXXXXXXXXXXXXVLQYPFYTEG KALLDARIDIAKYS   A+SRL
Sbjct: 181 GQLEKLMKVHEXXXXXXXXXXXXXXXXVLQYPFYTEGSKALLDARIDIAKYSILRASSRL 240

Query: 334 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 393
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 394 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX 453
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPVNECLATASADRTARLWSAEGSLLXXXXXX
Sbjct: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLXXXXXX 360

Query: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 513
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 420

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 574 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS 633
           XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXX           AKVTSLDIIS
Sbjct: 481 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVTSLDIIS 540

Query: 634 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 662
           DGQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDIQTMDVD 569

[Close]

BLAST of Carg21914 vs. TrEMBL
Match: tr|A0A1S4E4U8|A0A1S4E4U8_CUCME (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 GN=LOC103502534 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 2.3e-151
Identity = 508/570 (89.12%), Postives = 521/570 (91.40%), Query Frame = 0


Query: 94  MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITX 153
           M++DDQNPASTAAESPE LPGGENE+LDNPAEP QPAAT+VIP                X
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPXXXXXXXXXXXXXXXXX 60

Query: 154 XXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 213
           XXXXXX    LFRPPV QNGE+RTSDSDSEHDELAP+R   GSTAEYE+SEESRQ RER 
Sbjct: 61  XXXXXXRPP-LFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERH 120

Query: 214 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 273
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 274 GQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRL 333
           GQLEKL+KVH XXXXXXXXXXXXXXXXVLQYPFYTEG KALLDARIDIAKYS   A+SRL
Sbjct: 181 GQLEKLMKVHEXXXXXXXXXXXXXXXXVLQYPFYTEGSKALLDARIDIAKYSILRASSRL 240

Query: 334 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 393
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 394 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLXXXXXX 453
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPVNECLATASADRTARLWS EGS  XXXXXX
Sbjct: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSXXXXXXXX 360

Query: 454 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVELLLXXXXXXXXXXXXXXXXXXXXXX 513
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GVELLLXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGVELLLXXXXXXXXXXXXXXXXXXXXXX 420

Query: 514 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 573
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 574 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXFKPVKTLSGHEAKVTSLDIIS 633
           XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXX           AKVTSLDIIS
Sbjct: 481 XXXXXXXXXXXXXXXXXQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVTSLDIIS 540

Query: 634 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 662
           DGQCIATVSHDRTIKLWSVNSKD+QTMD+D
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDKQTMDID 569

[Close]

BLAST of Carg21914 vs. TrEMBL
Match: tr|A0A2I4G6S2|A0A2I4G6S2_9ROSI (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Juglans regia OX=51240 GN=LOC109005239 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 5.5e-105
Identity = 202/277 (72.92%), Postives = 233/277 (84.12%), Query Frame = 0


Query: 170 AQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASAL 229
           +QNGE+R SDSDS+HD+L P+R   GST EYEVSEESR +RERQEKA+QE LMKRRA AL
Sbjct: 77  SQNGEVRMSDSDSDHDDLGPNRTATGSTGEYEVSEESRFIRERQEKAIQELLMKRRAKAL 136

Query: 230 AVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLLKVHXXXXXX 289
           AVPTNDMAVR RLR+LGEP+TLFGEREMERR+RLRSIMA+LDAEGQLEKL++ H      
Sbjct: 137 AVPTNDMAVRTRLRKLGEPMTLFGEREMERRERLRSIMAKLDAEGQLEKLMRAHEEEEAA 196

Query: 290 XXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRLERAKRKRDDPDEDVEA 349
                      ++QYPFYTEG K+LLDAR++IAKYS   AA R++RA+RKRDDPDEDV+A
Sbjct: 197 ASAPKVDAEEEIVQYPFYTEGTKSLLDARVNIAKYSLVRAALRIQRAQRKRDDPDEDVDA 256

Query: 350 EMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQVRKVSNF 409
           EMDWAL+Q+E+LVLDCSEIGDDRPL GCSFS DGK LATSSLSGV K+WSMPQV+KVS  
Sbjct: 257 EMDWALKQSENLVLDCSEIGDDRPLCGCSFSRDGKLLATSSLSGVGKLWSMPQVKKVSTL 316

Query: 410 NGHTERVTDVIFSPVNECLATASADRTARLWSAEGSL 445
            GHTER TDV FSPV++ LATASADRTA+LW+ EGSL
Sbjct: 317 KGHTERATDVAFSPVHDHLATASADRTAKLWNTEGSL 353

[Close]

BLAST of Carg21914 vs. TrEMBL
Match: tr|A0A1Q3D9U4|A0A1Q3D9U4_CEPFO (WD40 domain-containing protein/PRP4 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32629 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 5.1e-103
Identity = 219/357 (61.34%), Postives = 257/357 (71.99%), Query Frame = 0


Query: 94  MDVDDQNPAST-AAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPP---P 153
           M VD++ P+ST  AE P     G+  D       +QP    +I   +VP IAP+P     
Sbjct: 1   MVVDEEIPSSTPPAEIPAAAADGQTVD-TTILSSVQPVTPPLIALPVVPLIAPVPAIHLA 60

Query: 154 LITXXXXXXXXXXLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQV 213
             T           + RPP+ QNGE R SDSDS+H +  P+R T G   +YE+SEES+QV
Sbjct: 61  PFTRPLAPLPPRPAVLRPPLPQNGEARGSDSDSDHVDSGPTRTTMG---DYEISEESKQV 120

Query: 214 RERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMAR 273
           RERQEKAMQ+ LMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLR IMA+
Sbjct: 121 RERQEKAMQDLLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMIMAK 180

Query: 274 LDAEGQLEKLLKVHXXXXXXXXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SA 333
           LDA+GQLEKL+K H                 +LQYPFYTEG K LLDARIDIAKYS   A
Sbjct: 181 LDADGQLEKLMKAHDEEEVAASTASHDAEEEMLQYPFYTEGSKELLDARIDIAKYSIVKA 240

Query: 334 ASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATS 393
           A RL+RA+RKRDDPDEDV+AE+DW L+QA +LVLDCSEIG++RPLSGCSFS +G+ LAT 
Sbjct: 241 ALRLQRARRKRDDPDEDVDAEIDWTLKQAGNLVLDCSEIGEERPLSGCSFSHNGELLATC 300

Query: 394 SLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSL 445
           +++GVA+ WSMPQV KVS   GH ER TDV FSPV   LATASAD+TARLW ++GSL
Sbjct: 301 AINGVARTWSMPQVHKVSTLKGHAERCTDVAFSPVQNLLATASADQTARLWDSDGSL 353

[Close]

BLAST of Carg21914 vs. TrEMBL
Match: tr|A0A2G3CD89|A0A2G3CD89_CAPCH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Capsicum chinense OX=80379 GN=BC332_12388 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.4e-100
Identity = 200/276 (72.46%), Postives = 223/276 (80.80%), Query Frame = 0


Query: 170 AQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASAL 229
           AQNGEM+ SDSDS+ +E+   R   GST EYE+SEESR +RERQEKAMQE LMKRRA+AL
Sbjct: 88  AQNGEMQVSDSDSDLEEMGSGRGAAGSTQEYEISEESRLIRERQEKAMQELLMKRRAAAL 147

Query: 230 AVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLLKVHXXXXXX 289
           AVPTNDMAVR RLRRLGEPITLFGEREMERRDRLR +MARLDAEGQLEKL+K H      
Sbjct: 148 AVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMLMARLDAEGQLEKLMKAHEDEEAA 207

Query: 290 XXXXXXXXXXXVLQYPFYTEGPKALLDARIDIAKYS--SAASRLERAKRKRDDPDEDVEA 349
                       +QYPFYTEG KALLDAR++IAKYS   +A RL RA+RKRDDPDEDV+A
Sbjct: 208 ASATPAEEED--IQYPFYTEGSKALLDARVEIAKYSLVKSALRLHRARRKRDDPDEDVDA 267

Query: 350 EMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQVRKVSNF 409
           E+DWALRQA SL LDCSEIGDDRPL GCS S DGK LAT SLSG+AK+W MPQVRKVS  
Sbjct: 268 EVDWALRQAGSLALDCSEIGDDRPLFGCSLSHDGKMLATCSLSGIAKIWKMPQVRKVSTL 327

Query: 410 NGHTERVTDVIFSPVNECLATASADRTARLWSAEGS 444
            GHTER TDV+FSP +  LATASAD+TARLW++EGS
Sbjct: 328 KGHTERATDVVFSPTSNYLATASADKTARLWNSEGS 361

The following BLAST results are available for this feature:

BLAST of Carg21914 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946187.1	7.3e-186	99.48	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita moschata]	[more]
XP_023525233.1	7.6e-183	98.95	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita pepo subsp. p...	[more]
XP_022999661.1	4.0e-176	97.37	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima]	[more]
XP_004146749.1	6.2e-153	90.18	PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sati...	[more]
XP_008464716.1	3.4e-151	89.12	PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo...	[more]

BLAST of Carg21914 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41500.1	2.8e-86	67.13	WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related	[more]
AT2G05720.1	7.1e-34	54.29	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G32551.2	8.8e-08	32.74	LisH dimerisation motif;WD40/YVTN repeat-like-containing domain	[more]
AT2G32700.7	2.2e-06	39.39	LEUNIG_homolog	[more]
AT2G33340.1	5.3e-05	34.62	MOS4-associated complex 3B	[more]

BLAST of Carg21914 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22212\|PRP4L_ARATH	5.0e-85	67.13	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana ...	[more]
sp\|O43172\|PRP4_HUMAN	2.8e-27	43.05	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1...	[more]
sp\|Q5NVD0\|PRP4_PONAB	2.8e-27	43.05	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2...	[more]
sp\|Q3MHE2\|PRP4_BOVIN	3.6e-27	43.05	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 S...	[more]
sp\|Q9DAW6\|PRP4_MOUSE	3.6e-27	43.05	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=...	[more]

BLAST of Carg21914 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHD8\|A0A0A0KHD8_CUCSA	4.1e-153	90.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404170 PE=4 SV=1	[more]
tr\|A0A1S4E4U8\|A0A1S4E4U8_CUCME	2.3e-151	89.12	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A2I4G6S2\|A0A2I4G6S2_9ROSI	5.5e-105	72.92	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Juglans regia OX=5124...	[more]
tr\|A0A1Q3D9U4\|A0A1Q3D9U4_CEPFO	5.1e-103	61.34	WD40 domain-containing protein/PRP4 domain-containing protein OS=Cephalotus foll...	[more]
tr\|A0A2G3CD89\|A0A2G3CD89_CAPCH	1.4e-100	72.46	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Capsicum chinense OX=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR019775	WD40_repeat_CS
IPR027106	Prp4
IPR036285	PRP4-like_sf
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat
IPR014906	PRP4-like
IPR020472	G-protein_beta_WD-40_rep

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21914-RA	Carg21914-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 426..440 score: 36.13 coord: 551..565 score: 40.13 coord: 636..650 score: 31.77
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 233..286 e-value: 1.1E-17 score: 74.7
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 238..265 e-value: 1.2E-12 score: 47.0
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 525..564 e-value: 1.7E-10 score: 50.9 coord: 610..649 e-value: 3.0E-10 score: 50.1 coord: 567..607 e-value: 5.2E-4 score: 29.3 coord: 356..397 e-value: 0.042 score: 23.0 coord: 483..522 e-value: 4.2E-6 score: 36.3 coord: 441..480 e-value: 7.9E-8 score: 42.0 coord: 400..439 e-value: 3.0E-8 score: 43.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 404..439 e-value: 9.2E-5 score: 23.0 coord: 442..480 e-value: 8.9E-5 score: 23.1 coord: 529..564 e-value: 1.5E-8 score: 35.0 coord: 491..522 e-value: 7.9E-4 score: 20.1 coord: 612..649 e-value: 1.8E-6 score: 28.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 407..439 score: 13.349
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 574..616 score: 11.712
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 532..573 score: 16.724
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 617..658 score: 14.218
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 490..531 score: 13.984
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 448..489 score: 13.516
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 532..663 e-value: 2.5E-39 score: 137.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 349..531 e-value: 3.1E-47 score: 162.9
IPR036285	PRP4-like superfamily	GENE3D	G3DSA:1.10.720.150		coord: 195..275 e-value: 2.8E-8 score: 35.0
IPR036285	PRP4-like superfamily	SUPERFAMILY	SSF158230	PRP4-like	coord: 215..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..213
None	No IPR available	CDD	cd00200	WD40	coord: 371..649 e-value: 3.89879E-87 score: 275.753
IPR027106	U4/U6 small nuclear ribonucleoprotein Prp4	PANTHER	PTHR19846	WD40 REPEAT PROTEIN	coord: 190..650
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 551..565
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 509..523
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 467..481
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 365..658 score: 64.33
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 365..648

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21914	Cla021890	Watermelon (97103) v1	carwmB0199
Carg21914	Csa6G404170	Cucumber (Chinese Long) v2	carcuB0235
Carg21914	MELO3C019779	Melon (DHL92) v3.5.1	carmeB0216
Carg21914	ClCG08G008940	Watermelon (Charleston Gray)	carwcgB0205
Carg21914	CSPI06G21170	Wild cucumber (PI 183967)	carcpiB0241
Carg21914	Cucsa.005460	Cucumber (Gy14) v1	carcgyB0254
Carg21914	CmaCh05G009390	Cucurbita maxima (Rimu)	carcmaB0290
Carg21914	CmoCh05G009600	Cucurbita moschata (Rifu)	carcmoB0296
Carg21914	Lsi08G007430	Bottle gourd (USVL1VR-Ls)	carlsiB188
Carg21914	MELO3C019779.2	Melon (DHL92) v3.6.1	carmedB0221
Carg21914	CsaV3_6G036200	Cucumber (Chinese Long) v3	carcucB0239
Carg21914	Cla97C08G151750	Watermelon (97103) v2	carwmbB0214
Carg21914	Bhi04G001005	Wax gourd	carwgoB0262

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21914	Cucumber (Gy14) v2	carcgybB0224
Carg21914	Cucurbita pepo (Zucchini)	carcpeB0297