Cla021661 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla021661
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	BHLH transcription factor (AHRD V1 ***- Q8H7N8_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location	Chr5 : 5058037 .. 5058786 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCATATTGCTGTGGAAAGAAATAGGAGAAGGCAAATGAATGAACATCTTAGGGTTTTGAGATCTTTGACTCCTTGTTTCTATATCAAAAGGGTTTTCCCTTCAACCTCTCTCTTTTAATTTCCTCTTTTCATCTTATTCTTAATTTTCTTATGTTCTCATGTCATGGGGTTTGGTTTTTTTTATTTTACTATAGGGAGATCAAGCCTCGATTATTGGGGGAGTCATAGAGTTTATCAAGGAGTTGCATCAAGTTTTACAATCGTTGGAGTCCAACAAACGGAGGAGGAAGAGTATAAGCCCTAGCCCTGGTCCGAGCCCGAGGCCGCAATCAATGGCGGGATCCAATAATGGCTCGCTTGGATTTGAAAATGGAGTTGATGTCGTCGGAGCATGTTGCAATTCATCGGTCGCAGATGTCGAAGCGAAGATTTCGGGTTCAAACGTGGTTTTGAAGATCATTTCCCGCCGGATTCCTGGTCAACTTTCGAAGATGATTGGTGTCTTCGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAACATTAGTAGTATGGATGACACAGTTCTGTACTCTTTTGTTGTCAAGGTATATTATATCAAAATAGGGCTAACTCTAGCCTTCTTATTAATTAGGGTTTCTTTTTTGGTTGGGGATATTATTTAAAAGAAAATCCACTTGAAACCCTAATTAATCTTCTTGATTTCACACATAAACTAACAGAATTATCTATCTCTAAATAGGAATGA

mRNA sequence

ATGGCTCATATTGCTGTGGAAAGAAATAGGAGAAGGCAAATGAATGAACATCTTAGGGGAGATCAAGCCTCGATTATTGGGGGAGTCATAGAGTTTATCAAGGAGTTGCATCAAGTTTTACAATCGTTGGAGTCCAACAAACGGAGGAGGAAGAGTATAAGCCCTAGCCCTGGTCCGAGCCCGAGGCCGCAATCAATGGCGGGATCCAATAATGGCTCGCTTGGATTTGAAAATGGAGTTGATGTCGTCGGAGCATGTTGCAATTCATCGGTCGCAGATGTCGAAGCGAAGATTTCGGGTTCAAACGTGGTTTTGAAGATCATTTCCCGCCGGATTCCTGGTCAACTTTCGAAGATGATTGGTGTCTTCGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAACATTAGTAGTATGGATGACACAGTTCTGTACTCTTTTGTTGTCAAGGAATGA

Coding sequence (CDS)

ATGGCTCATATTGCTGTGGAAAGAAATAGGAGAAGGCAAATGAATGAACATCTTAGGGGAGATCAAGCCTCGATTATTGGGGGAGTCATAGAGTTTATCAAGGAGTTGCATCAAGTTTTACAATCGTTGGAGTCCAACAAACGGAGGAGGAAGAGTATAAGCCCTAGCCCTGGTCCGAGCCCGAGGCCGCAATCAATGGCGGGATCCAATAATGGCTCGCTTGGATTTGAAAATGGAGTTGATGTCGTCGGAGCATGTTGCAATTCATCGGTCGCAGATGTCGAAGCGAAGATTTCGGGTTCAAACGTGGTTTTGAAGATCATTTCCCGCCGGATTCCTGGTCAACTTTCGAAGATGATTGGTGTCTTCGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAACATTAGTAGTATGGATGACACAGTTCTGTACTCTTTTGTTGTCAAGGAATGA

Protein sequence

MAHIAVERNRRRQMNEHLRGDQASIIGGVIEFIKELHQVLQSLESNKRRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKIISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVKE

Homology

[Close]

BLAST of Cla021661 vs. Swiss-Prot
Match: MUTE_ARATH (Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.4e-40
Identity = 101/173 (58.38%), Postives = 117/173 (67.63%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M+HIAVERNRRRQMNEHL             RGDQASIIGGVIEFIKEL Q++Q LES K
Sbjct: 1   MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60

Query: 61  RRRKSISPS---PGPSPRPQSMAGSNNGSLGFENGVDV--------VGACCNSSVADVEA 120
           RR+    PS      +  P S+ G+    + F    +V        VGACCNS  A+VEA
Sbjct: 61  RRKTLNRPSFPYDHQTIEPSSL-GAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEA 120

Query: 121 KISGSNVVLKIISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           KISGSNVVL+++SRRI GQL K+I V E+LSF+VLHLNISSM++TVLY FVVK
Sbjct: 121 KISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVK 172

[Close]

BLAST of Cla021661 vs. Swiss-Prot
Match: FAMA_ARATH (Transcription factor FAMA OS=Arabidopsis thaliana GN=FAMA PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-28
Identity = 82/177 (46.33%), Postives = 100/177 (56.50%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHLR-------------GDQASIIGGVIEFIKELHQVLQSLESNK 60
           M HIAVERNRR+QMNEHLR             GDQASIIGG IEF++EL Q+LQ LES K
Sbjct: 197 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 256

Query: 61  RRR--------------KSISPSPGPSPRPQSMAGSNNGS-LGFENGVDVVGACCNSSVA 120
           RRR               S SP    + + Q +  + N + L    G+    A   S +A
Sbjct: 257 RRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLA 316

Query: 121 DVEAKISGSNVVLKIISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           DVE K+ G + ++KI+SRR PGQL K I   E L   +LH NI++M+ TVLYSF VK
Sbjct: 317 DVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVK 373

[Close]

BLAST of Cla021661 vs. Swiss-Prot
Match: BH057_ARATH (Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-22
Identity = 74/182 (40.66%), Postives = 94/182 (51.65%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M HIAVERNRRRQMNEHL             RGDQASI+GG I+FIKEL Q+LQSLE+ K
Sbjct: 115 MTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEK 174

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVA--------------- 120
           R+        G    P++ + S++ SL          AC NSS++               
Sbjct: 175 RK-------DGTDETPKTASCSSSSSL----------ACTNSSISSVSTTSENGFTARFG 234

Query: 121 -----DVEAKISGSNVVLKIISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFV 150
                +VEA +  ++V LK+  +R   Q+ K I   E L   +LHL ISS  D V+YSF 
Sbjct: 235 GGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFN 279

[Close]

BLAST of Cla021661 vs. Swiss-Prot
Match: BH070_ARATH (Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-21
Identity = 72/163 (44.17%), Postives = 90/163 (55.21%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M HIAVERNRRRQMN HL             RGDQASI+GG I+F+K L Q LQSLE+ K
Sbjct: 193 MTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQK 252

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKI 120
           R ++S   +    P   S+   ++  L   N  +       SS   +EA +  S+V LKI
Sbjct: 253 RSQQS-DDNKEQIPEDNSLRNISSNKLRASNKEE------QSSKLKIEATVIESHVNLKI 312

Query: 121 ISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDT-VLYSFVVK 150
              R  GQL + I + E+L F VLHLNI+S  +T V YSF +K
Sbjct: 313 QCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLK 348

[Close]

BLAST of Cla021661 vs. Swiss-Prot
Match: BH094_ARATH (Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 8.1e-20
Identity = 60/167 (35.93%), Postives = 92/167 (55.09%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M HIAVERNRR+QMNE+L             RGDQASI+GG I ++KEL  +LQS+E  +
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKR 174

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGF-----ENGVDVVGACCNSSVADVEAKISGSN 120
            R        G      S+ G       F     ++  DV  +  +SS A++E  ++ S+
Sbjct: 175 TRTHD---PKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPES--SSSPAEIEVTVAESH 234

Query: 121 VVLKIISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
             +KI++++ P QL K+I   + L   +LHLN++++ +++LYS  V+
Sbjct: 235 ANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVR 276

[Close]

BLAST of Cla021661 vs. TrEMBL
Match: A0A0A0L8U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150010 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.3e-64
Identity = 139/163 (85.28%), Postives = 142/163 (87.12%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHLR-------------GDQASIIGGVIEFIKELHQVLQSLESNK 60
           MAHIAVERNRRRQMNEHLR             GDQASIIGGVIEFIKELHQVLQSLESNK
Sbjct: 1   MAHIAVERNRRRQMNEHLRVLRSLTPSFYIKRGDQASIIGGVIEFIKELHQVLQSLESNK 60

Query: 61  RRRKSISPSPGPSPRPQSMA-GSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLK 120
           RRRKSISPSPGPSP+ Q +A GS+N   GFENGVDV GACCNSSVADVEAKISGSNVVLK
Sbjct: 61  RRRKSISPSPGPSPKAQLVALGSDNSPFGFENGVDV-GACCNSSVADVEAKISGSNVVLK 120

Query: 121 IISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           IISRRIPGQL KMIGVFERLSFEVLHLNISSMDDTVLYSFVVK
Sbjct: 121 IISRRIPGQLPKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 162

[Close]

BLAST of Cla021661 vs. TrEMBL
Match: A0A0R6HST9_VITVI (MUTE OS=Vitis vinifera GN=MUTE PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.8e-54
Identity = 118/162 (72.84%), Postives = 132/162 (81.48%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M+HIAVERNRRRQMNEHL             RGDQASIIGGVIEFIKELHQVLQSLES K
Sbjct: 1   MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQSLES-K 60

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKI 120
           +RRKS+SPSPGPSPRP  +    +   G EN  ++ GACCNSSVADVEAKISGSNV+L+I
Sbjct: 61  KRRKSLSPSPGPSPRPLQLTSQPDTPFGLENFKEL-GACCNSSVADVEAKISGSNVILRI 120

Query: 121 ISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           ISRRIPGQ+ K+I V E+LSFEVLHLNISSM++TVLYSFVVK
Sbjct: 121 ISRRIPGQIVKIINVLEKLSFEVLHLNISSMEETVLYSFVVK 160

[Close]

BLAST of Cla021661 vs. TrEMBL
Match: A0A0R6HY81_VITRI (MUTE OS=Vitis riparia GN=MUTE PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.0e-53
Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M+HIAVERNRRRQMNEHL             RGDQASIIGGVIEFIKELHQVLQSLES K
Sbjct: 1   MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQSLES-K 60

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKI 120
           +RRKS+SPSPGPSPRP  +    +   G EN  ++ GACCNSSVADVEAKISGSNV+L+I
Sbjct: 61  KRRKSLSPSPGPSPRPLQLTSQPDTPFGLENFKEL-GACCNSSVADVEAKISGSNVILRI 120

Query: 121 ISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           ISRRIPGQ+ K+I V E+ SFEVLHLNISSM++TVLYSFV+K
Sbjct: 121 ISRRIPGQIVKIINVLEKFSFEVLHLNISSMEETVLYSFVIK 160

[Close]

BLAST of Cla021661 vs. TrEMBL
Match: A0A0R6GLX3_VITRI (MUTE OS=Vitis riparia GN=MUTE PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-53
Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M+HIAVERNRRRQ NEHL             RGDQASIIGGVIEFIKELHQVLQSLES K
Sbjct: 1   MSHIAVERNRRRQKNEHLKVLRFLTPCFYIKRGDQASIIGGVIEFIKELHQVLQSLES-K 60

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKI 120
           +RRKS+SPSPGPSPRP  +    +   G EN  ++ GACCNSSVADVEAKISGSNV+L+I
Sbjct: 61  KRRKSLSPSPGPSPRPLQLTSQPDTPFGLENFKEL-GACCNSSVADVEAKISGSNVILRI 120

Query: 121 ISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           ISRRIPGQ+ K+I V E+LSFEVLHLNISSM++TVLYSFV+K
Sbjct: 121 ISRRIPGQIVKIINVLEKLSFEVLHLNISSMEETVLYSFVIK 160

[Close]

BLAST of Cla021661 vs. TrEMBL
Match: A0A0R6HYB5_VITRI (MUTE OS=Vitis riparia GN=MUTE PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-53
Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M+HIAVERNRRRQ NEHL             RGDQASIIGGVIEFIKELHQVLQSLES K
Sbjct: 1   MSHIAVERNRRRQKNEHLKVLRFLTPCFYIKRGDQASIIGGVIEFIKELHQVLQSLES-K 60

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKI 120
           +RRKS+SPSPGPSPRP  +    +   G EN  ++ GACCNSSVADVEAKISGSNV+L+I
Sbjct: 61  KRRKSLSPSPGPSPRPLQLTSQPDTPFGLENFKEL-GACCNSSVADVEAKISGSNVILRI 120

Query: 121 ISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           ISRRIPGQ+ K+I V E+LSFEVLHLNISSM++TVLYSFV+K
Sbjct: 121 ISRRIPGQIVKIINVLEKLSFEVLHLNISSMEETVLYSFVIK 160

[Close]

BLAST of Cla021661 vs. NCBI nr
Match: gi|659076510|ref|XP_008438719.1| (PREDICTED: transcription factor MUTE [Cucumis melo])

HSP 1 Score: 257.7 bits (657), Expect = 1.3e-65
Identity = 141/163 (86.50%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHLR-------------GDQASIIGGVIEFIKELHQVLQSLESNK 60
           MAHIAVERNRRRQMNEHLR             GDQASIIGGVIEFIKELHQVLQSLESNK
Sbjct: 1   MAHIAVERNRRRQMNEHLRVLRSLTPSFYIKRGDQASIIGGVIEFIKELHQVLQSLESNK 60

Query: 61  RRRKSISPSPGPSPRPQSMA-GSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLK 120
           RRRKSISPSPGPSPRPQ +A GS+    GFENGVDV GACCNSSVADVEAKISGSNVVLK
Sbjct: 61  RRRKSISPSPGPSPRPQLVALGSDKSPFGFENGVDV-GACCNSSVADVEAKISGSNVVLK 120

Query: 121 IISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           IISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK
Sbjct: 121 IISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 162

[Close]

BLAST of Cla021661 vs. NCBI nr
Match: gi|778678580|ref|XP_011650991.1| (PREDICTED: transcription factor MUTE [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 1.8e-64
Identity = 139/163 (85.28%), Postives = 142/163 (87.12%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHLR-------------GDQASIIGGVIEFIKELHQVLQSLESNK 60
           MAHIAVERNRRRQMNEHLR             GDQASIIGGVIEFIKELHQVLQSLESNK
Sbjct: 1   MAHIAVERNRRRQMNEHLRVLRSLTPSFYIKRGDQASIIGGVIEFIKELHQVLQSLESNK 60

Query: 61  RRRKSISPSPGPSPRPQSMA-GSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLK 120
           RRRKSISPSPGPSP+ Q +A GS+N   GFENGVDV GACCNSSVADVEAKISGSNVVLK
Sbjct: 61  RRRKSISPSPGPSPKAQLVALGSDNSPFGFENGVDV-GACCNSSVADVEAKISGSNVVLK 120

Query: 121 IISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           IISRRIPGQL KMIGVFERLSFEVLHLNISSMDDTVLYSFVVK
Sbjct: 121 IISRRIPGQLPKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 162

[Close]

BLAST of Cla021661 vs. NCBI nr
Match: gi|794510301|gb|AKA58674.1| (MUTE [Vitis vinifera])

HSP 1 Score: 218.0 bits (554), Expect = 1.1e-53
Identity = 118/162 (72.84%), Postives = 132/162 (81.48%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M+HIAVERNRRRQMNEHL             RGDQASIIGGVIEFIKELHQVLQSLES K
Sbjct: 1   MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQSLES-K 60

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKI 120
           +RRKS+SPSPGPSPRP  +    +   G EN  ++ GACCNSSVADVEAKISGSNV+L+I
Sbjct: 61  KRRKSLSPSPGPSPRPLQLTSQPDTPFGLENFKEL-GACCNSSVADVEAKISGSNVILRI 120

Query: 121 ISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           ISRRIPGQ+ K+I V E+LSFEVLHLNISSM++TVLYSFVVK
Sbjct: 121 ISRRIPGQIVKIINVLEKLSFEVLHLNISSMEETVLYSFVVK 160

[Close]

BLAST of Cla021661 vs. NCBI nr
Match: gi|794510446|gb|AKA58680.1| (MUTE [Vitis riparia])

HSP 1 Score: 216.1 bits (549), Expect = 4.2e-53
Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M+HIAVERNRRRQMNEHL             RGDQASIIGGVIEFIKELHQVLQSLES K
Sbjct: 1   MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQSLES-K 60

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKI 120
           +RRKS+SPSPGPSPRP  +    +   G EN  ++ GACCNSSVADVEAKISGSNV+L+I
Sbjct: 61  KRRKSLSPSPGPSPRPLQLTSQPDTPFGLENFKEL-GACCNSSVADVEAKISGSNVILRI 120

Query: 121 ISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           ISRRIPGQ+ K+I V E+ SFEVLHLNISSM++TVLYSFV+K
Sbjct: 121 ISRRIPGQIVKIINVLEKFSFEVLHLNISSMEETVLYSFVIK 160

[Close]

BLAST of Cla021661 vs. NCBI nr
Match: gi|794510329|gb|AKA58675.1| (MUTE [Vitis riparia])

HSP 1 Score: 215.3 bits (547), Expect = 7.2e-53
Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 1


Query: 1   MAHIAVERNRRRQMNEHL-------------RGDQASIIGGVIEFIKELHQVLQSLESNK 60
           M+HIAVERNRRRQ NEHL             RGDQASIIGGVIEFIKELHQVLQSLES K
Sbjct: 1   MSHIAVERNRRRQKNEHLKVLRFLTPCFYIKRGDQASIIGGVIEFIKELHQVLQSLES-K 60

Query: 61  RRRKSISPSPGPSPRPQSMAGSNNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKI 120
           +RRKS+SPSPGPSPRP  +    +   G EN  ++ GACCNSSVADVEAKISGSNV+L+I
Sbjct: 61  KRRKSLSPSPGPSPRPLQLTSQPDTPFGLENFKEL-GACCNSSVADVEAKISGSNVILRI 120

Query: 121 ISRRIPGQLSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVK 150
           ISRRIPGQ+ K+I V E+LSFEVLHLNISSM++TVLYSFV+K
Sbjct: 121 ISRRIPGQIVKIINVLEKLSFEVLHLNISSMEETVLYSFVIK 160

The following BLAST results are available for this feature:

BLAST of Cla021661 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MUTE_ARATH	2.4e-40	58.38	Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1	[more]
FAMA_ARATH	2.8e-28	46.33	Transcription factor FAMA OS=Arabidopsis thaliana GN=FAMA PE=1 SV=1	[more]
BH057_ARATH	2.3e-22	40.66	Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2 SV=1	[more]
BH070_ARATH	2.5e-21	44.17	Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2 SV=1	[more]
BH094_ARATH	8.1e-20	35.93	Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2	[more]

BLAST of Cla021661 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8U9_CUCSA	1.3e-64	85.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150010 PE=4 SV=1	[more]
A0A0R6HST9_VITVI	7.8e-54	72.84	MUTE OS=Vitis vinifera GN=MUTE PE=2 SV=1	[more]
A0A0R6HY81_VITRI	3.0e-53	71.60	MUTE OS=Vitis riparia GN=MUTE PE=2 SV=1	[more]
A0A0R6GLX3_VITRI	5.0e-53	71.60	MUTE OS=Vitis riparia GN=MUTE PE=2 SV=1	[more]
A0A0R6HYB5_VITRI	5.0e-53	71.60	MUTE OS=Vitis riparia GN=MUTE PE=4 SV=1	[more]

BLAST of Cla021661 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076510\|ref\|XP_008438719.1\|	1.3e-65	86.50	PREDICTED: transcription factor MUTE [Cucumis melo]	[more]
gi\|778678580\|ref\|XP_011650991.1\|	1.8e-64	85.28	PREDICTED: transcription factor MUTE [Cucumis sativus]	[more]
gi\|794510301\|gb\|AKA58674.1\|	1.1e-53	72.84	MUTE [Vitis vinifera]	[more]
gi\|794510446\|gb\|AKA58680.1\|	4.2e-53	71.60	MUTE [Vitis riparia]	[more]
gi\|794510329\|gb\|AKA58675.1\|	7.2e-53	71.60	MUTE [Vitis riparia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002912	ACT_dom
IPR011598	bHLH_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016597	amino acid binding
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0009913	epidermal cell differentiation
biological_process	GO:0008150	biological_process
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010374	stomatal complex development
biological_process	GO:0009888	tissue development
biological_process	GO:0044767	single-organism developmental process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla021661	Cla021661.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002912	ACT domain	PROFILE	PS51671	ACT	coord: 104..150 score: 8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 1..50 score: 2.6
None	No IPR available	PANTHER	PTHR11514	MYC	coord: 1..149 score: 1.2
None	No IPR available	PANTHER	PTHR11514:SF49	TRANSCRIPTION FACTOR MUTE	coord: 1..149 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla021661	Cla97C05G086750	Watermelon (97103) v2	wmwmbB206
Cla021661	Csa3G150010	Cucumber (Chinese Long) v2	cuwmB233
Cla021661	MELO3C006563	Melon (DHL92) v3.5.1	mewmB461
Cla021661	ClCG05G005410	Watermelon (Charleston Gray)	wcgwmB286
Cla021661	CSPI03G13480	Wild cucumber (PI 183967)	cpiwmB231
Cla021661	Cucsa.254010	Cucumber (Gy14) v1	cgywmB479
Cla021661	CmaCh06G014320	Cucurbita maxima (Rimu)	cmawmB798
Cla021661	CmoCh06G014350	Cucurbita moschata (Rifu)	cmowmB793
Cla021661	Lsi05G014540	Bottle gourd (USVL1VR-Ls)	lsiwmB362
Cla021661	Cp4.1LG08g04260	Cucurbita pepo (Zucchini)	cpewmB845
Cla021661	CsGy3G013600	Cucumber (Gy14) v2	cgybwmB217
Cla021661	MELO3C006563.2	Melon (DHL92) v3.6.1	medwmB447
Cla021661	Carg17401	Silver-seed gourd	carwmB0603
Cla021661	CsaV3_3G013690	Cucumber (Chinese Long) v3	cucwmB239
Cla021661	Bhi01G000628	Wax gourd	wgowmB201

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla021661	Cucurbita maxima (Rimu)	cmawmB242
Cla021661	Cucurbita maxima (Rimu)	cmawmB344
Cla021661	Cucurbita maxima (Rimu)	cmawmB869
Cla021661	Cucurbita moschata (Rifu)	cmowmB231
Cla021661	Cucurbita moschata (Rifu)	cmowmB341
Cla021661	Cucurbita moschata (Rifu)	cmowmB856
Cla021661	Melon (DHL92) v3.5.1	mewmB096
Cla021661	Watermelon (Charleston Gray)	wcgwmB332
Cla021661	Cucurbita pepo (Zucchini)	cpewmB152
Cla021661	Cucurbita pepo (Zucchini)	cpewmB331
Cla021661	Cucurbita pepo (Zucchini)	cpewmB613
Cla021661	Bottle gourd (USVL1VR-Ls)	lsiwmB017
Cla021661	Melon (DHL92) v3.6.1	medwmB094
Cla021661	Melon (DHL92) v3.6.1	medwmB228
Cla021661	Silver-seed gourd	carwmB0070
Cla021661	Silver-seed gourd	carwmB0211
Cla021661	Silver-seed gourd	carwmB0316
Cla021661	Watermelon (97103) v2	wmwmbB217
Cla021661	Wax gourd	wgowmB068
Cla021661	Watermelon (97103) v1	wmwmB138