Cla021559 (gene) Watermelon (97103) v1

NameCla021559
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionProtease inhibitor 1 (AHRD V1 ***- D3W0X2_9ROSI); contains Interpro domain(s) IPR000864 Proteinase inhibitor I13, potato inhibitor I
LocationChr5 : 4136784 .. 4137258 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTACAACATGCAAAGGTAAATGAGTAATATTGCATCATCAAGTCATCTTCGGTTTTTGAACATTGTATTTATTTTAATTTTATCATTTTTTCACAATAATTTTAAATTTTAATTTAAAAAACACAAACTATGCCTATTTAGATTTTGGATTTTTAACACTATATTTATAAACATTATTTTTATATATAGATTTTTTTTTTCATGTTATTCAACCTACACGAGCTTAAATTTATGAAAAAATGAATTAATATCGTTTTGCATGTTTCACTTTTAGGAAAGAGTTCATGGCCGGAATTGGTTGGTAAGGCAGGAAAAGAAGCAGAGAAAATTATTGAGAAGGAGAATCCATTGGTTGACGCCATTATTGTTGATGAAGGATCAATGGTGATTCTAGACTTCAGGTGCGATAGGGTCTGGGTTTGGGTTGATTCCAAAACAGGCATAGTCACTAGGACTCCTTTCATTGGTTAA

mRNA sequence

ATGTCTACAACATGCAAAGGAAAGAGTTCATGGCCGGAATTGGTTGGTAAGGCAGGAAAAGAAGCAGAGAAAATTATTGAGAAGGAGAATCCATTGGTTGACGCCATTATTGTTGATGAAGGATCAATGGTGATTCTAGACTTCAGGTGCGATAGGGTCTGGGTTTGGGTTGATTCCAAAACAGGCATAGTCACTAGGACTCCTTTCATTGGTTAA

Coding sequence (CDS)

ATGTCTACAACATGCAAAGGAAAGAGTTCATGGCCGGAATTGGTTGGTAAGGCAGGAAAAGAAGCAGAGAAAATTATTGAGAAGGAGAATCCATTGGTTGACGCCATTATTGTTGATGAAGGATCAATGGTGATTCTAGACTTCAGGTGCGATAGGGTCTGGGTTTGGGTTGATTCCAAAACAGGCATAGTCACTAGGACTCCTTTCATTGGTTAA

Protein sequence

MSTTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSKTGIVTRTPFIG
BLAST of Cla021559 vs. Swiss-Prot
Match: BGIA_MOMCH (Glu S.griseus protease inhibitor OS=Momordica charantia PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.3e-15
Identity = 40/67 (59.70%), Postives = 46/67 (68.66%), Query Frame = 1

Query: 5  CKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSKTGIV 64
          C+GK SWP+LVG  G  A+ +IE+ENP V A+IV  GS V  DFRCDRV VWV ++ GIV
Sbjct: 3  CQGKRSWPQLVGSTGAAAKAVIERENPRVRAVIVRVGSPVTADFRCDRVRVWV-TERGIV 62

Query: 65 TRTPFIG 72
           R P IG
Sbjct: 63 ARPPAIG 68

BLAST of Cla021559 vs. Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.3e-14
Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 1

Query: 3  TTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSKTG 62
          ++C GKSSWP LVG  G  A+ IIE++NP V A+I++EG+ V  DFRC+RV +WV +K G
Sbjct: 1  SSCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWV-NKRG 60

Query: 63 IVTRTPFIG 72
          +V   P IG
Sbjct: 61 LVVSPPRIG 68

BLAST of Cla021559 vs. Swiss-Prot
Match: ATSI_AMACA (Trypsin/subtilisin inhibitor OS=Amaranthus caudatus PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 7.0e-14
Identity = 39/64 (60.94%), Postives = 43/64 (67.19%), Query Frame = 1

Query: 5  CKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSKTGIV 64
          C GK  WPELVG+ G +A  IIE+ENP V +I+  E S    DFRCDRVWV VDS TG+V
Sbjct: 4  CPGKQEWPELVGEYGYKAAAIIERENPNVRSIVKHERSGFTKDFRCDRVWVVVDS-TGVV 63

Query: 65 TRTP 69
           RTP
Sbjct: 64 VRTP 66

BLAST of Cla021559 vs. Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-13
Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 1

Query: 2  STTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSKT 61
          S  C GK++WPELVGK+G  A   +E+EN  V AI++ EGS +  DFRCDRVWV V+   
Sbjct: 1  SRRCPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDH- 60

Query: 62 GIVTRTPFI 71
          G+VT  P I
Sbjct: 61 GVVTSVPHI 68

BLAST of Cla021559 vs. Swiss-Prot
Match: ITI_FAGTA (Trypsin inhibitor OS=Fagopyrum tataricum PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.2e-09
Identity = 33/72 (45.83%), Postives = 41/72 (56.94%), Query Frame = 1

Query: 4  TCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVI----LDFRCDRVWVWVDS 63
          T  GK SWPELVG  GK A   I+KEN  V A++    + +      DFRCDRV V ++ 
Sbjct: 15 TYVGKQSWPELVGTKGKTAAATIDKENTHVTAVLCPPLTTLAACRTFDFRCDRVRVLINR 74

Query: 64 KTGIVTRTPFIG 72
            G+VT+TP +G
Sbjct: 75 IGGVVTKTPTVG 86

BLAST of Cla021559 vs. TrEMBL
Match: A0A0A0L795_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142960 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.7e-30
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 1

Query: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSK 60
          MSTTCKGKSSWPELVGKAGKEAEKIIEKENP VDA+IVDEGS+V  DFRCDRVWVWVDSK
Sbjct: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPSVDAVIVDEGSVVTQDFRCDRVWVWVDSK 60

Query: 61 TGIVTRTPFIG 72
          T IVTRTPFIG
Sbjct: 61 TSIVTRTPFIG 71

BLAST of Cla021559 vs. TrEMBL
Match: U5G1C3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s08600g PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-20
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 1

Query: 3  TTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSKTG 62
          TTC+GKSSWPEL+G  GK A   IE+ENPLV+AIIV EGSMVILDFRCDRVWVWVD K G
Sbjct: 5  TTCQGKSSWPELLGAEGKVAAATIERENPLVEAIIVPEGSMVILDFRCDRVWVWVD-KRG 64

Query: 63 IVTRTPFIG 72
          IV + P IG
Sbjct: 65 IVFQVPGIG 72

BLAST of Cla021559 vs. TrEMBL
Match: B1ACD2_SOYBN (Putative protease inhibitor OS=Glycine max GN=GLYMA_10G184700 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-20
Identity = 52/71 (73.24%), Postives = 55/71 (77.46%), Query Frame = 1

Query: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSK 60
          MS  CKGKSSWPELVG  G  AE  IE+ENPLVDAIIV EG+MVI DFRCDRVWVW+D K
Sbjct: 1  MSDDCKGKSSWPELVGVQGTVAEATIERENPLVDAIIVPEGNMVITDFRCDRVWVWID-K 60

Query: 61 TGIVTRTPFIG 72
           GIV   P IG
Sbjct: 61 DGIVKEVPHIG 70

BLAST of Cla021559 vs. TrEMBL
Match: A0A0B2P035_GLYSO (Inhibitor of trypsin and hageman factor OS=Glycine soja GN=glysoja_000750 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-20
Identity = 52/71 (73.24%), Postives = 55/71 (77.46%), Query Frame = 1

Query: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSK 60
          MS  CKGKSSWPELVG  G  AE  IE+ENPLVDAIIV EG+MVI DFRCDRVWVW+D K
Sbjct: 1  MSDDCKGKSSWPELVGVQGTVAEATIERENPLVDAIIVPEGNMVITDFRCDRVWVWID-K 60

Query: 61 TGIVTRTPFIG 72
           GIV   P IG
Sbjct: 61 DGIVKEVPHIG 70

BLAST of Cla021559 vs. TrEMBL
Match: A0A0A0L4J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142970 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.5e-20
Identity = 50/71 (70.42%), Postives = 55/71 (77.46%), Query Frame = 1

Query: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSK 60
          MS  CKGKSSWPELVG +G  AEKIIEKEN  V+AIIV++G  V  DFRCDRVWVWVD  
Sbjct: 1  MSIDCKGKSSWPELVGVSGNIAEKIIEKENCYVNAIIVEQGKFVTQDFRCDRVWVWVDKH 60

Query: 61 TGIVTRTPFIG 72
          T IV +TP IG
Sbjct: 61 THIVIKTPIIG 71

BLAST of Cla021559 vs. NCBI nr
Match: gi|449432606|ref|XP_004134090.1| (PREDICTED: glu S.griseus protease inhibitor-like [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 5.3e-30
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 1

Query: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSK 60
          MSTTCKGKSSWPELVGKAGKEAEKIIEKENP VDA+IVDEGS+V  DFRCDRVWVWVDSK
Sbjct: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPSVDAVIVDEGSVVTQDFRCDRVWVWVDSK 60

Query: 61 TGIVTRTPFIG 72
          T IVTRTPFIG
Sbjct: 61 TSIVTRTPFIG 71

BLAST of Cla021559 vs. NCBI nr
Match: gi|659076233|ref|XP_008438570.1| (PREDICTED: glu S.griseus protease inhibitor-like [Cucumis melo])

HSP 1 Score: 137.9 bits (346), Expect = 6.9e-30
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 1

Query: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSK 60
          MSTTCKGKSSWPELVGKAGKEAEK IE+ENPLVDAIIVDEGS+VI DFRCDRVWVWVD K
Sbjct: 1  MSTTCKGKSSWPELVGKAGKEAEKTIERENPLVDAIIVDEGSVVIQDFRCDRVWVWVDPK 60

Query: 61 TGIVTRTPFIG 72
          T IVTRTPFIG
Sbjct: 61 TAIVTRTPFIG 71

BLAST of Cla021559 vs. NCBI nr
Match: gi|351727373|ref|NP_001238694.1| (protease inhibitor-like [Glycine max])

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-20
Identity = 52/71 (73.24%), Postives = 55/71 (77.46%), Query Frame = 1

Query: 1  MSTTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSK 60
          MS  CKGKSSWPELVG  G  AE  IE+ENPLVDAIIV EG+MVI DFRCDRVWVW+D K
Sbjct: 1  MSDDCKGKSSWPELVGVQGTVAEATIERENPLVDAIIVPEGNMVITDFRCDRVWVWID-K 60

Query: 61 TGIVTRTPFIG 72
           GIV   P IG
Sbjct: 61 DGIVKEVPHIG 70

BLAST of Cla021559 vs. NCBI nr
Match: gi|566189800|ref|XP_006378352.1| (hypothetical protein POPTR_0010s08600g [Populus trichocarpa])

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-20
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 1

Query: 3  TTCKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSKTG 62
          TTC+GKSSWPEL+G  GK A   IE+ENPLV+AIIV EGSMVILDFRCDRVWVWVD K G
Sbjct: 5  TTCQGKSSWPELLGAEGKVAAATIERENPLVEAIIVPEGSMVILDFRCDRVWVWVD-KRG 64

Query: 63 IVTRTPFIG 72
          IV + P IG
Sbjct: 65 IVFQVPGIG 72

BLAST of Cla021559 vs. NCBI nr
Match: gi|357441047|ref|XP_003590801.1| (inhibitor of trypsin and hageman factor-like protein [Medicago truncatula])

HSP 1 Score: 104.8 bits (260), Expect = 6.5e-20
Identity = 52/67 (77.61%), Postives = 55/67 (82.09%), Query Frame = 1

Query: 5  CKGKSSWPELVGKAGKEAEKIIEKENPLVDAIIVDEGSMVILDFRCDRVWVWVDSKTGIV 64
          CKGKSSWPELVG  GK AE  IE+ENPLV+AIIV EGS VILDFRCDRVWVWVD K GIV
Sbjct: 7  CKGKSSWPELVGVEGKVAEATIERENPLVNAIIVPEGSAVILDFRCDRVWVWVD-KDGIV 66

Query: 65 TRTPFIG 72
           + P IG
Sbjct: 67 FKVPTIG 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BGIA_MOMCH6.3e-1559.70Glu S.griseus protease inhibitor OS=Momordica charantia PE=1 SV=1[more]
ITH5_CUCMA5.3e-1453.62Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1[more]
ATSI_AMACA7.0e-1460.94Trypsin/subtilisin inhibitor OS=Amaranthus caudatus PE=1 SV=1[more]
ICI_LINUS2.0e-1353.62Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1[more]
ITI_FAGTA5.2e-0945.83Trypsin inhibitor OS=Fagopyrum tataricum PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L795_CUCSA3.7e-3091.55Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142960 PE=4 SV=1[more]
U5G1C3_POPTR2.0e-2075.36Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s08600g PE=4 SV=1[more]
B1ACD2_SOYBN2.0e-2073.24Putative protease inhibitor OS=Glycine max GN=GLYMA_10G184700 PE=2 SV=1[more]
A0A0B2P035_GLYSO2.0e-2073.24Inhibitor of trypsin and hageman factor OS=Glycine soja GN=glysoja_000750 PE=4 S... [more]
A0A0A0L4J0_CUCSA4.5e-2070.42Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142970 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449432606|ref|XP_004134090.1|5.3e-3091.55PREDICTED: glu S.griseus protease inhibitor-like [Cucumis sativus][more]
gi|659076233|ref|XP_008438570.1|6.9e-3091.55PREDICTED: glu S.griseus protease inhibitor-like [Cucumis melo][more]
gi|351727373|ref|NP_001238694.1|2.9e-2073.24protease inhibitor-like [Glycine max][more]
gi|566189800|ref|XP_006378352.1|2.9e-2075.36hypothetical protein POPTR_0010s08600g [Populus trichocarpa][more]
gi|357441047|ref|XP_003590801.1|6.5e-2077.61inhibitor of trypsin and hageman factor-like protein [Medicago truncatula][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000864Prot_inh_pot1
Vocabulary: Molecular Function
TermDefinition
GO:0004867serine-type endopeptidase inhibitor activity
Vocabulary: Biological Process
TermDefinition
GO:0009611response to wounding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0009611 response to wounding
cellular_component GO:0005575 cellular_component
molecular_function GO:0004867 serine-type endopeptidase inhibitor activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU41468watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021559Cla021559.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU41468WMU41468transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000864Proteinase inhibitor I13, potato inhibitor IPRODOMPD002604coord: 10..71
score: 4.
IPR000864Proteinase inhibitor I13, potato inhibitor IPRINTSPR00292POTATOINHBTRcoord: 10..23
score: 5.2E-7coord: 47..57
score: 5.2E-7coord: 35..46
score: 5.
IPR000864Proteinase inhibitor I13, potato inhibitor IPFAMPF00280potato_inhibitcoord: 8..71
score: 5.6
IPR000864Proteinase inhibitor I13, potato inhibitor IPROSITEPS00285POTATO_INHIBITORcoord: 11..22
scor
IPR000864Proteinase inhibitor I13, potato inhibitor IunknownSSF54654CI-2 family of serine protease inhibitorscoord: 4..71
score: 1.14
NoneNo IPR availableGENE3DG3DSA:3.30.10.10coord: 4..71
score: 3.4
NoneNo IPR availablePANTHERPTHR33091FAMILY NOT NAMEDcoord: 1..71
score: 4.7
NoneNo IPR availablePANTHERPTHR33091:SF14SUBFAMILY NOT NAMEDcoord: 1..71
score: 4.7

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla021559Wax gourdwgowmB062
Cla021559Wax gourdwgowmB270
Cla021559Wax gourdwgowmB407
Cla021559Watermelon (97103) v1wmwmB099
Cla021559Watermelon (97103) v1wmwmB133
Cla021559Watermelon (97103) v1wmwmB138
Cla021559Cucumber (Gy14) v1cgywmB221
Cla021559Cucumber (Gy14) v1cgywmB479
Cla021559Cucumber (Gy14) v1cgywmB690
Cla021559Cucurbita maxima (Rimu)cmawmB003
Cla021559Cucurbita maxima (Rimu)cmawmB242
Cla021559Cucurbita maxima (Rimu)cmawmB344
Cla021559Cucurbita maxima (Rimu)cmawmB798
Cla021559Cucurbita maxima (Rimu)cmawmB869
Cla021559Cucurbita moschata (Rifu)cmowmB231
Cla021559Cucurbita moschata (Rifu)cmowmB340
Cla021559Cucurbita moschata (Rifu)cmowmB793
Cla021559Cucurbita moschata (Rifu)cmowmB856
Cla021559Melon (DHL92) v3.5.1mewmB413
Cla021559Melon (DHL92) v3.5.1mewmB461
Cla021559Watermelon (Charleston Gray)wcgwmB191
Cla021559Watermelon (Charleston Gray)wcgwmB286
Cla021559Watermelon (Charleston Gray)wcgwmB331
Cla021559Watermelon (Charleston Gray)wcgwmB382
Cla021559Cucumber (Chinese Long) v2cuwmB122
Cla021559Cucumber (Chinese Long) v2cuwmB233
Cla021559Cucurbita pepo (Zucchini)cpewmB151
Cla021559Cucurbita pepo (Zucchini)cpewmB331
Cla021559Cucurbita pepo (Zucchini)cpewmB613
Cla021559Cucurbita pepo (Zucchini)cpewmB845
Cla021559Bottle gourd (USVL1VR-Ls)lsiwmB017
Cla021559Bottle gourd (USVL1VR-Ls)lsiwmB365
Cla021559Bottle gourd (USVL1VR-Ls)lsiwmB367
Cla021559Cucumber (Gy14) v2cgybwmB117
Cla021559Cucumber (Gy14) v2cgybwmB217
Cla021559Melon (DHL92) v3.6.1medwmB404
Cla021559Melon (DHL92) v3.6.1medwmB447
Cla021559Silver-seed gourdcarwmB0218
Cla021559Silver-seed gourdcarwmB0223
Cla021559Silver-seed gourdcarwmB0782
Cla021559Silver-seed gourdcarwmB0961
Cla021559Silver-seed gourdcarwmB1075
Cla021559Cucumber (Chinese Long) v3cucwmB136
Cla021559Cucumber (Chinese Long) v3cucwmB239
Cla021559Watermelon (97103) v2wmwmbB203
Cla021559Watermelon (97103) v2wmwmbB206
Cla021559Watermelon (97103) v2wmwmbB217
Cla021559Watermelon (97103) v2wmwmbB221