Cla021066 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla021066
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Potato DNA for copia-like transposable element (AHRD V1 -- Q04356_SOLTU)
Location	Chr5 : 101577 .. 104869 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCTCGGCTGCTCAAAAAGGTTTTAAAGGAACAGGAGGAGCTTCAACAGCACTATTCTCAATCCTCCACCACTGAAGACGGACAGGATCCTGGGCCATCGTCACCTACTGCTTCTTCTATCAATCCCTTCGACCTCCTCATCGATGACGAAGATGACTCCCAAATTAACCCTCAACAGGTTTCTTATTTCATCCCCCTCTACAACTTTGCTGAATTCTCAACTTTTCACATGCCTGCACTCTAATTAATTTGGAAACCGGAGCTTTCTCTATTTCTATATGTTTTAAACATATTTACTTAACAATGAAATTTGATACTTTAATGGTTCCTTCCGCAACTATGTGCACCCAACTATAAACGTATGAATAGTTGTTTGATTTTGCAGTATATTAATTATATATTAGGCATTCTATTTATATTACGACGCTTATATCTTTTCGTAAGTAGGCTTCCGAAATGCTTTTTGTTTTTTAATTAATCACATTTTTGTAATTTAGACAGCAATAAACGTATTCCAACAATAAACAATAGAAATATAAAGAACAATTTCTAAAATTTTACCTATTGATGTCTTGTGTTTTTTAAAAGCACCCATTCATTGAAAATGATGAGTCCTGGCTTGCATTCATCTTATGGGTTAAACATACAGAAAGATAAAGGATTAAGAAACCGGAATAAGAAAGGCATTTTTCCAAACTAACTTTTAAATTAAAAAAAGTCTCATAGCTCTCTGCTTTGATAAGTTTGGTTGGAGGGGAATTGTTTCTAATTCCTTCCAAACTAACTTTTAAACAATTTTTTTGTACCCGATGGTTAAACTATATTTTATACTGTTTTTTATCCACCAGTTTCAACTTTGGCCAATTTATGCCACAGTTAACTATTTTTGAAGCCAAAGGTGGCTGACTTGAGCTTAATATTAGTACATAACTACTAATTCTACTTTGTGTGTGTGCGTACGCAACTAGTGGGGAGCACAGAGAACTTACAAAAACAAAGAACTCAACCTTTTCTTAACGAAATAAAGGAAAATTACATCACAAAATTAAGTCAAGAACACAAGGGAAGCACTAAACTGCACAAAATGTTGTTGGAAATTTATATGAGATATAAATAATTGCACGTGTTATCTTGTTAGTGCGGTTAGTTAATTTTCCTAGAGATAGTTTTGTCTCCACACAAAAACCCAACAATCTCCCACTTGGAGACTGTTGAAAATAAAAAGGGAAATTATTTGGGAGATATTGTGGAATTAAGTCTTTCCTTTTCCCAATATCTTTTCCTTGTATAAGTTGTTTTTACCTCTATTTATTCTTCCCCTTGTAATGTTTTAAAGAGTATCAAATTAAATAAAAAAAAAAGTTCCATCATGGTTTTTTCTCCCTGTTCTAGGGTTTTCCACGTACATCTTTGCGTTATTTCTTATTCTCTTTTTCATTATGGTATAAGAGCAGGAAACCCTAGAAACCCTAGCCGTCGTCGACGAAAATAACCCTAGAACAGATCCGCCGCCTCACTTGCCGCTACCGCCGTCACCGATGGAGTCCACCCCCGCCACCACCGAGTCAGCTGTCCAAGCCGCCGTCCAGCAGTACCTCTGGTCGCTCAATCTCGACGTCGCCGCCGCCGCCATTACAAAACCCTAGCGGCGCAACCCCTCAGACTCAACCGCCGCCGCCGGGGAACGCTGGAGCTGCGACTCGGACCGACCAGCAAGCCGCCGCCCATCCCACGTCGAACCCAGATCTGAGATTTCCGCCAATTATCGCCGCCGGTTCTTCTTCGATCGTCGAGGGAAACTCTTCGTCTGGGTTTTGCGAGCAGCAGAGGTGTCTTCGATTGTCGGTTTTTGGTGAGCAGCAGAGGAGTCCTAAAGCCGCCGTGTTTCCGACCACCGTGGTGCCTTTTCCGTCGACCATGGTGCCTTTTTCGTTGACCCTTCCTCCGACCACCGTGGCTACCACCAGATCTGGTGGTTTTTACTCAAATTCGACCAAATCTGGTGGTTTTTACTTAGATCCGGTTGGATCGGGGGGGTTTGCCTCAACAAAATCACTTCAACAACAACTCGTGGACCTTCAAGCAAATTTTCAGCAACAAATCGCCGCTCTTGGGGCTGCCTTGAGCTCTTCTAATCTTGGTCAAAGTACAGTCAATTCAGGTGTTTTCTCAGCTTTACCGATGTATCCAGAGAATCTGGTAACTGTAATCCCTACTTTAACGACTGCACCGTATTTGTTTGGACAATTGGGTAACTCTTCTAGCTTAATTGTTGGCGAAAAATTGAATGGTCAGAATTATTTCTCTTGGTCCCAATCCGTTAAAATGGTACTTGAAGGGCGCCATAAGTTCAGATATTTGACTGGCGAAACACCTAAAACCCAAACCCGGAGATCCTCAAGAGCGCCTCTGGAAAGGAGAAGACTCATTACTCCGGTCATTGCTAATTCACAGCATGGAACCTCAAATTGGGAAGCCTTTGTTGTATGCTGCTACAGCTCGGGATGTTTGGGATGCTATTAAAAAATTATACTCCAAAAGACAGAACGCCTCTCAGCTTTATACACTACGGAAAAAAATCCACGAATGTCAACAAGGTAATATGGATGTCACGTCATACTTTAACAAATTGTCTCTGATCTGGCAGAAAATGGATTTGTGTCGAGAACTTGTCTGGGATTGTCCTTGGGGGGAGTTCAGTACTACAAACTTGAGGCAGTCAAACGAGTATATGATTTCTTAGCCGGTATAAATTCCAAATTCAATGCTGTGCGAAGTCGAATATTGGGACAGAAACCAACATCGACCTTGATGGAAGTCTGTTTAGAGGTTCGGCTGGAGGAAAGTAGAACGAGCGCTATGAATACTGTGGGTAGTTCCATTACTGACTCATCTGCGTTCAGTGCAAAATCAGCTAGTACAACTGGAGACAAGCAGAACGGTAAACCTCCTCCAGTTTGTGAACACTGTAAGAAACCGTGGCACACGAAAGATCAATGTTGGAAGCTACATGGTCGACCCCCGAATGGTAAACGCCGACCTCCTAACAACAAACCTAACCATGCCCTCGTAAGTGAAACAACAAGTGACTCGCAACCACAACAGAACTACCCAGTTGACAATGGTACCGCCTCTCTTGGGGTGATTGCACATTCAGGTATCTCTCAATCCTTGAGTCTACTCAGTATTACTGGCCAGAAACCCTGGATTCTTGATTCAGGAGCAACAGACCATTTGACTGGAACTTCGGGCAATTTCCTTTCCTATTATCCATGTGCTGGTATATGA

mRNA sequence

ATGTCCGCTCGGCTGCTCAAAAAGGTTTTAAAGGAACAGGAGGAGCTTCAACAGCACTATTCTCAATCCTCCACCACTGAAGACGGACAGGATCCTGGGCCATCGTCACCTACTGCTTCTTCTATCAATCCCTTCGACCTCCTCATCGATGACGAAGATGACTCCCAAATTAACCCTCAACAGGTTCAGTACTACAAACTTGAGGCAGTCAAACGAGTATATGATTTCTTAGCCGGTATAAATTCCAAATTCAATGCTGTGCGAAGTCGAATATTGGGACAGAAACCAACATCGACCTTGATGGAAGTCTGTTTAGAGGTTCGGCTGGAGGAAAGTAGAACGAGCGCTATGAATACTGTGGGTAGTTCCATTACTGACTCATCTGCGTTCAGTGCAAAATCAGCTAGTACAACTGGAGACAAGCAGAACGGTAAACCTCCTCCAGTTTGTGAACACTGTAAGAAACCGTGGCACACGAAAGATCAATGTTGGAAGCTACATGGTCGACCCCCGAATGGTAAACGCCGACCTCCTAACAACAAACCTAACCATGCCCTCGTAAGTGAAACAACAAGTGACTCGCAACCACAACAGAACTACCCAGTTGACAATGGTACCGCCTCTCTTGGGGTGATTGCACATTCAGGTATCTCTCAATCCTTGAGTCTACTCAGTATTACTGGCCAGAAACCCTGGATTCTTGATTCAGGAGCAACAGACCATTTGACTGGAACTTCGGGCAATTTCCTTTCCTATTATCCATGTGCTGGTATATGA

Coding sequence (CDS)

ATGTCCGCTCGGCTGCTCAAAAAGGTTTTAAAGGAACAGGAGGAGCTTCAACAGCACTATTCTCAATCCTCCACCACTGAAGACGGACAGGATCCTGGGCCATCGTCACCTACTGCTTCTTCTATCAATCCCTTCGACCTCCTCATCGATGACGAAGATGACTCCCAAATTAACCCTCAACAGGTTCAGTACTACAAACTTGAGGCAGTCAAACGAGTATATGATTTCTTAGCCGGTATAAATTCCAAATTCAATGCTGTGCGAAGTCGAATATTGGGACAGAAACCAACATCGACCTTGATGGAAGTCTGTTTAGAGGTTCGGCTGGAGGAAAGTAGAACGAGCGCTATGAATACTGTGGGTAGTTCCATTACTGACTCATCTGCGTTCAGTGCAAAATCAGCTAGTACAACTGGAGACAAGCAGAACGGTAAACCTCCTCCAGTTTGTGAACACTGTAAGAAACCGTGGCACACGAAAGATCAATGTTGGAAGCTACATGGTCGACCCCCGAATGGTAAACGCCGACCTCCTAACAACAAACCTAACCATGCCCTCGTAAGTGAAACAACAAGTGACTCGCAACCACAACAGAACTACCCAGTTGACAATGGTACCGCCTCTCTTGGGGTGATTGCACATTCAGGTATCTCTCAATCCTTGAGTCTACTCAGTATTACTGGCCAGAAACCCTGGATTCTTGATTCAGGAGCAACAGACCATTTGACTGGAACTTCGGGCAATTTCCTTTCCTATTATCCATGTGCTGGTATATGA

Protein sequence

MSARLLKKVLKEQEELQQHYSQSSTTEDGQDPGPSSPTASSINPFDLLIDDEDDSQINPQQVQYYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCLEVRLEESRTSAMNTVGSSITDSSAFSAKSASTTGDKQNGKPPPVCEHCKKPWHTKDQCWKLHGRPPNGKRRPPNNKPNHALVSETTSDSQPQQNYPVDNGTASLGVIAHSGISQSLSLLSITGQKPWILDSGATDHLTGTSGNFLSYYPCAGI

Homology

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BLAST of Cla021066 vs. TrEMBL
Match: A5AYJ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041073 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.6e-30
Identity = 89/235 (37.87%), Postives = 120/235 (51.06%), Query Frame = 1


Query: 46  DLLIDDEDDSQINPQQVQYYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCL 105
           DL  +DE D   +   V++ K E   RVY FLA +N   + VR RILG+KP  ++ EV  
Sbjct: 156 DLCYEDEWDCPND--SVRHKKREENDRVYVFLAALNHNLDEVRGRILGRKPLPSIREVFS 215

Query: 106 EVRLEESRTSAMNT----VGSSITDSSAFSAKSASTTGDKQNGKPPPVCEHCKKPWHTKD 165
           EVR EE+R   M T    + +   +SSA  +K +   GD++     P C+HCKKPWHTK 
Sbjct: 216 EVRREEARRKVMLTDPEPMSNPEIESSALVSKGSDLDGDRRK---KPWCDHCKKPWHTKG 275

Query: 166 QCWKLHGRPPNGKRRPPNNKPNHALVSETTSDSQPQQNYPVDNGTASL------------ 225
            CWK+HG+P N K++  N     A  + +     PQ N    N T               
Sbjct: 276 TCWKIHGKPQNFKKK--NGSDGRAFQTMSADSQGPQINSEKPNFTKEQLSHLYKLFQSPQ 335

Query: 226 -----GVIAHSG--ISQSLSLLSITGQKPWILDSGATDHLTGTSGNFLSYYPCAG 258
                  +A  G  +  +LS +      PWI+DSGATDH+TG+S  F SY PCAG
Sbjct: 336 FSNPSCSLAQQGNYLIAALSSIKSNVHCPWIIDSGATDHMTGSSQIFSSYKPCAG 383

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BLAST of Cla021066 vs. TrEMBL
Match: A5AG59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024390 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.7e-27
Identity = 81/245 (33.06%), Postives = 124/245 (50.61%), Query Frame = 1


Query: 46  DLLIDDEDDSQINPQQVQYYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCL 105
           DL ++ +D+ +     V++ K    +RV++FLAG+N + + VRSR+L ++P  ++ EV  
Sbjct: 146 DLDLNCKDEWECTGDNVRFKKKMENERVFEFLAGLNRELDNVRSRVLSRRPLPSIREVFS 205

Query: 106 EVRLEESRTSAM--NTVGSSITDSSAFSAKSASTTGDKQNGKPP-----PVCEHCKKPWH 165
           EVRLEESR   M    + S    S+  +    + +G   +G  P       CEHCKK  H
Sbjct: 206 EVRLEESRRRVMLREHLSSRPKASALITRGPHAGSGGPHSGSGPRQSKRTYCEHCKKLGH 265

Query: 166 TKDQCWKLHGRPPNGKRRPPNNKPNHALVSETTSDSQPQQ-------------------- 225
           TKD CW LHG+P N K R PN   +H   ++T +D  P +                    
Sbjct: 266 TKDTCWTLHGKPANWKPRQPNKAHSHQASTKTQADKTPSEIRQSTSSEDFNSBQLAKLYE 325

Query: 226 ---NYPV---DNGTASLGVIAHSGISQSLSLLSITGQKPWILDSGATDHLTGTSGNFLSY 258
              N+      + T S G + H   +  ++L +++   PWI+DSGA+DH+T     F +Y
Sbjct: 326 FFSNFQASXQSSTTLSSGSLTHKD-TFFIALSAMSHITPWIIDSGASDHMTDAHHLFSTY 385

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BLAST of Cla021066 vs. TrEMBL
Match: A5BAZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004170 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26
Identity = 69/204 (33.82%), Postives = 113/204 (55.39%), Query Frame = 1


Query: 64  YYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCLEVRLEESRTSAMNTVGSS 123
           Y K+   KR++ F  G+N +F+ VR RI+G KP  +L E   EVR EESR   +  +GS 
Sbjct: 166 YKKIVEQKRLFKFFLGLNREFDDVRGRIMGIKPLPSLREAFSEVRREESRKKVI--MGSK 225

Query: 124 -----ITDSSAFSAKSASTTGDKQNGKPPPVCEHCKKPWHTKDQCWKLHGRPPNGKRRPP 183
                  D+SAF+A+S +++G  +  +  P C++CKKP H K+ CWKLHG+P + K +P 
Sbjct: 226 EQPAPTLDASAFAARSFNSSGGDRQKRDRPWCDYCKKPGHYKEACWKLHGKPADWKPKPR 285

Query: 184 NNKPNHALVSETTSDSQPQQNYPVDNGTAS-----LGVIAHSGISQSLSLLSITGQKPWI 243
           +++   A V+  ++ +   +  P +          L  +     ++   + +  G KPWI
Sbjct: 286 SDRDGRAHVAANSASTSVPEPSPFNKEQMEMLQKLLSQVGSGSTTRIAFIANRGGMKPWI 345

Query: 244 LDSGATDHLTGTSGNFLSYYPCAG 258
           +D+GA+DH+TG +    +Y P  G
Sbjct: 346 VDTGASDHMTGDAAILQNYKPSNG 367

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BLAST of Cla021066 vs. TrEMBL
Match: A5C9Q9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008809 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.9e-26
Identity = 75/207 (36.23%), Postives = 117/207 (56.52%), Query Frame = 1


Query: 64  YYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCLEVRLEESRTSAMNTVGSS 123
           Y ++   KR++ F  G+N + + VR RI+G KP  +L E   EVR EESR   M  +GS 
Sbjct: 177 YRQIVEQKRLFKFFLGLNRELDDVRGRIMGIKPLXSLREAFSEVRXEESRKKVM--MGSK 236

Query: 124 -----ITDSSAFSAKSASTTGDKQNGKPPPVCEHCKKPWHTKDQCWKLHGRPPNGKRRPP 183
                  D SA +A+S +++G  +  +  P C++CKKP H K+ CWKLHG+P + K +P 
Sbjct: 237 EQPAPTLDGSALAARSFNSSGGDRQKRDRPWCDYCKKPGHYKEACWKLHGKPXDWKPKPR 296

Query: 184 NNKPNHALV---SETTSDSQP-----QQNYPVDNGTASLGVIAHSGISQSLSLLSITGQK 243
           +++   A V   SE+TS  +P     +Q   +    + +G  + +GI+ + S     G K
Sbjct: 297 SDRDGRAHVAANSESTSVPEPSPFNKEQMEMLQKLLSQVGSGSTTGIALTASR---GGMK 356

Query: 244 PWILDSGATDHLTGTSGNFLSYYPCAG 258
           PWI+D+GA+DH+TG +    +Y P  G
Sbjct: 357 PWIVDTGASDHMTGDAAILQNYKPSNG 378

[Close]

BLAST of Cla021066 vs. TrEMBL
Match: A5C2W3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027440 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25
Identity = 76/204 (37.25%), Postives = 114/204 (55.88%), Query Frame = 1


Query: 64  YYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCLEVRLEESRTSAMNTVGSS 123
           Y K+   KR++ F  G+N + + VR RI+G KP  +L E   EVR EESR   M  +GS 
Sbjct: 109 YRKIMKQKRLFKFFLGLNRELDDVRGRIMGIKPLPSLREAFSEVRREESRKKVM--MGSK 168

Query: 124 -----ITDSSAFSAKSASTTGDKQNGKPPPVCEHCKKPWHTKDQCWKLHGRPPNGKRRPP 183
                  D+SA +A+S +++G  +  +  P C++CKKP H K+ CWKLHG+P + K +P 
Sbjct: 169 EQPAPTLDASALAARSFNSSGGDRQKRDRPWCDYCKKPGHYKEACWKLHGKPADWKPKPQ 228

Query: 184 NNKPNHALV---SETTSDSQPQQ-NYPVDNGTASLGVIAHSGISQSLSLLSIT-GQKPWI 243
           +++   A V   SE+TS  +P   N         L     SG +  ++L +   G KPWI
Sbjct: 229 SDRDGRAHVAANSESTSVPEPSPFNKEQMEMLQKLLSQVDSGSTTGIALTANRGGMKPWI 288

Query: 244 LDSGATDHLTGTSGNFLSYYPCAG 258
           +D+GA+DH+TG +    +Y P  G
Sbjct: 289 VDTGASDHMTGDAVILQNYKPSNG 310

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BLAST of Cla021066 vs. NCBI nr
Match: gi|659114444|ref|XP_008457057.1| (PREDICTED: uncharacterized protein LOC103496827 [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 7.6e-42
Identity = 89/161 (55.28%), Postives = 110/161 (68.32%), Query Frame = 1


Query: 101 MEVCLEVRLEESRTSAMNTVGSSITDSSAFSAKSASTTGDKQNGKPPPVCEHCKKPWHTK 160
           MEVC +VRLEE RT+AM+ + +   DS+AFSA+S++   +K NGK   VC HCKK WHTK
Sbjct: 1   MEVCFKVRLEEDRTNAMDVLTTPTIDSAAFSARSSNHDSNKNNGKSIHVCGHCKKQWHTK 60

Query: 161 DQCWKLHGRPPNGKRRPPNNKPN--HALVSETTSDSQPQQNYPV--DNGTASLGVIAHSG 220
           +QCWKLH RPP GK++  N K N     +SETT  S  Q   P      T +L VIA SG
Sbjct: 61  EQCWKLHNRPPEGKKQSSNEKQNSGRVYISETTPASTSQSTGPTASQTKTLTLCVIAQSG 120

Query: 221 ISQSLSLLSITGQKPWILDSGATDHLTGTSGNFLSYYPCAG 258
           + QSL L+S+ G+ PWILDSGA DHLTG+S  F+SY PCAG
Sbjct: 121 MHQSLELISVDGKNPWILDSGAIDHLTGSSEQFISYAPCAG 161

[Close]

BLAST of Cla021066 vs. NCBI nr
Match: gi|659125044|ref|XP_008462481.1| (PREDICTED: uncharacterized protein LOC103500824 [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 8.4e-41
Identity = 90/173 (52.02%), Postives = 113/173 (65.32%), Query Frame = 1


Query: 63  QYYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCLEVRLEESRTSAMNTVGS 122
           QY +LE     YDF AG+N KF+ V  RILGQ+P S+++EVC EV LEE RT+AM  + +
Sbjct: 17  QYAELEEADHDYDFFAGLNPKFDTVCGRILGQRPLSSIIEVCFEVCLEEDRTNAMGVLTT 76

Query: 123 SITDSSAFSAKSASTTGDKQNGKPPPVCEHCKKPWHTKDQCWKLHGRPPNGKRRPPNNKP 182
              D  AFSA+S++   DK NGK   VCEHCKK WHTKD+CWKLHGRPP GK++  N K 
Sbjct: 77  PTIDIVAFSARSSNHDSDKNNGKLISVCEHCKKQWHTKDRCWKLHGRPPGGKKQSSNEKQ 136

Query: 183 N--HALVSETTSDSQPQQNYPV--DNGTASLGVIAHSGISQSLSLLSITGQKP 232
           N   A +SETT  S  Q   P+     T +LG IA S + QSL L+S+ G+ P
Sbjct: 137 NSGRAYISETTLASTSQSTGPIASQTKTPTLGAIAQSRVPQSLGLISVDGRIP 189

[Close]

BLAST of Cla021066 vs. NCBI nr
Match: gi|659120823|ref|XP_008460367.1| (PREDICTED: uncharacterized protein LOC103499210 [Cucumis melo])

HSP 1 Score: 150.2 bits (378), Expect = 4.9e-33
Identity = 79/162 (48.77%), Postives = 109/162 (67.28%), Query Frame = 1


Query: 62  VQYYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCLEVRLEESRTSAMNTVG 121
           +QY ++E + R+Y FL G+N KF+ VR  IL Q+P  +LMEV  E+RLEE+ TSA++ + 
Sbjct: 35  LQYSRMEEIDRIYGFLVGLNPKFDIVRGHILHQRPIPSLMEVYYEIRLEENCTSAVSILA 94

Query: 122 SSITDSSAFSAKSASTTGDKQNGKPPPVCEHCKKPWHTKDQCWKLHGRPPNGKRRPPNNK 181
           +   D +AFSA+S+++  DK + KP PVCE+ KK WHTK++ WKLHGR P GK+R PN+K
Sbjct: 95  TPNIDFAAFSARSSNSGSDKHDRKPIPVCENSKKQWHTKERYWKLHGRSPGGKKRDPNDK 154

Query: 182 PN--HALVSETTSDSQPQQNYPVDNGT----ASLGVIAHSGI 218
            N   A VSE++  SQP    P  N T    A+LG I  SG+
Sbjct: 155 QNTGWAYVSESSGPSQPLD--PHGNQTYFSPATLGAIVQSGL 194

[Close]

BLAST of Cla021066 vs. NCBI nr
Match: gi|147819777|emb|CAN76196.1| (hypothetical protein VITISV_041073 [Vitis vinifera])

HSP 1 Score: 139.8 bits (351), Expect = 6.6e-30
Identity = 89/235 (37.87%), Postives = 120/235 (51.06%), Query Frame = 1


Query: 46  DLLIDDEDDSQINPQQVQYYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCL 105
           DL  +DE D   +   V++ K E   RVY FLA +N   + VR RILG+KP  ++ EV  
Sbjct: 156 DLCYEDEWDCPND--SVRHKKREENDRVYVFLAALNHNLDEVRGRILGRKPLPSIREVFS 215

Query: 106 EVRLEESRTSAMNT----VGSSITDSSAFSAKSASTTGDKQNGKPPPVCEHCKKPWHTKD 165
           EVR EE+R   M T    + +   +SSA  +K +   GD++     P C+HCKKPWHTK 
Sbjct: 216 EVRREEARRKVMLTDPEPMSNPEIESSALVSKGSDLDGDRRK---KPWCDHCKKPWHTKG 275

Query: 166 QCWKLHGRPPNGKRRPPNNKPNHALVSETTSDSQPQQNYPVDNGTASL------------ 225
            CWK+HG+P N K++  N     A  + +     PQ N    N T               
Sbjct: 276 TCWKIHGKPQNFKKK--NGSDGRAFQTMSADSQGPQINSEKPNFTKEQLSHLYKLFQSPQ 335

Query: 226 -----GVIAHSG--ISQSLSLLSITGQKPWILDSGATDHLTGTSGNFLSYYPCAG 258
                  +A  G  +  +LS +      PWI+DSGATDH+TG+S  F SY PCAG
Sbjct: 336 FSNPSCSLAQQGNYLIAALSSIKSNVHCPWIIDSGATDHMTGSSQIFSSYKPCAG 383

[Close]

BLAST of Cla021066 vs. NCBI nr
Match: gi|147765699|emb|CAN77904.1| (hypothetical protein VITISV_024390 [Vitis vinifera])

HSP 1 Score: 130.2 bits (326), Expect = 5.3e-27
Identity = 81/245 (33.06%), Postives = 124/245 (50.61%), Query Frame = 1


Query: 46  DLLIDDEDDSQINPQQVQYYKLEAVKRVYDFLAGINSKFNAVRSRILGQKPTSTLMEVCL 105
           DL ++ +D+ +     V++ K    +RV++FLAG+N + + VRSR+L ++P  ++ EV  
Sbjct: 146 DLDLNCKDEWECTGDNVRFKKKMENERVFEFLAGLNRELDNVRSRVLSRRPLPSIREVFS 205

Query: 106 EVRLEESRTSAM--NTVGSSITDSSAFSAKSASTTGDKQNGKPP-----PVCEHCKKPWH 165
           EVRLEESR   M    + S    S+  +    + +G   +G  P       CEHCKK  H
Sbjct: 206 EVRLEESRRRVMLREHLSSRPKASALITRGPHAGSGGPHSGSGPRQSKRTYCEHCKKLGH 265

Query: 166 TKDQCWKLHGRPPNGKRRPPNNKPNHALVSETTSDSQPQQ-------------------- 225
           TKD CW LHG+P N K R PN   +H   ++T +D  P +                    
Sbjct: 266 TKDTCWTLHGKPANWKPRQPNKAHSHQASTKTQADKTPSEIRQSTSSEDFNSBQLAKLYE 325

Query: 226 ---NYPV---DNGTASLGVIAHSGISQSLSLLSITGQKPWILDSGATDHLTGTSGNFLSY 258
              N+      + T S G + H   +  ++L +++   PWI+DSGA+DH+T     F +Y
Sbjct: 326 FFSNFQASXQSSTTLSSGSLTHKD-TFFIALSAMSHITPWIIDSGASDHMTDAHHLFSTY 385

The following BLAST results are available for this feature:

BLAST of Cla021066 vs. TrEMBL


Match Name	E-value	Identity	Description
A5AYJ3_VITVI	4.6e-30	37.87	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041073 PE=4 SV=1	[more]
A5AG59_VITVI	3.7e-27	33.06	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024390 PE=4 SV=1	[more]
A5BAZ3_VITVI	1.4e-26	33.82	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004170 PE=4 SV=1	[more]
A5C9Q9_VITVI	6.9e-26	36.23	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008809 PE=4 SV=1	[more]
A5C2W3_VITVI	1.5e-25	37.25	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027440 PE=4 SV=1	[more]

BLAST of Cla021066 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114444\|ref\|XP_008457057.1\|	7.6e-42	55.28	PREDICTED: uncharacterized protein LOC103496827 [Cucumis melo]	[more]
gi\|659125044\|ref\|XP_008462481.1\|	8.4e-41	52.02	PREDICTED: uncharacterized protein LOC103500824 [Cucumis melo]	[more]
gi\|659120823\|ref\|XP_008460367.1\|	4.9e-33	48.77	PREDICTED: uncharacterized protein LOC103499210 [Cucumis melo]	[more]
gi\|147819777\|emb\|CAN76196.1\|	6.6e-30	37.87	hypothetical protein VITISV_041073 [Vitis vinifera]	[more]
gi\|147765699\|emb\|CAN77904.1\|	5.3e-27	33.06	hypothetical protein VITISV_024390 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU28765	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU59883	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla021066	Cla021066.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU28765	WMU28765	transcribed_cluster
WMU59883	WMU59883	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 71..195 score: 5.2
None	No IPR available	PANTHER	PTHR34222:SF2	SUBFAMILY NOT NAMED	coord: 71..195 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla021066	Cucumber (Gy14) v1	cgywmB479
Cla021066	Cucurbita maxima (Rimu)	cmawmB799
Cla021066	Cucurbita moschata (Rifu)	cmowmB793
Cla021066	Melon (DHL92) v3.5.1	mewmB461
Cla021066	Watermelon (Charleston Gray)	wcgwmB286
Cla021066	Cucumber (Chinese Long) v2	cuwmB233
Cla021066	Cucurbita pepo (Zucchini)	cpewmB845
Cla021066	Bottle gourd (USVL1VR-Ls)	lsiwmB365
Cla021066	Cucumber (Gy14) v2	cgybwmB217
Cla021066	Melon (DHL92) v3.6.1	medwmB447
Cla021066	Silver-seed gourd	carwmB1013
Cla021066	Cucumber (Chinese Long) v3	cucwmB239
Cla021066	Watermelon (97103) v2	wmwmbB206
Cla021066	Wax gourd	wgowmB212