Cla020765 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTCTGGATCGAATTGGACGGCAAAGCAGAACAAAGTGTTTGAAAATGCTTTAGCCATCTACGACAAAGACACGCCGGAGCGGTGGCACAACCTCGCCAGAGCCGTCGGCGGCAAGACGGTGGAGGAAGTCAAACGCCACTACGAAAGGCTCGTTGAAGATGTCAACAAGATCGAGACCGGCCAAGTTCCTTTCCCTAATTACAGAAGATCCGGACCTGCCGGCAGAGGATTTTGCTTTGTTGACGAAGAACAACGGTAA ATGGGGTCTGGATCGAATTGGACGGCAAAGCAGAACAAAGTGTTTGAAAATGCTTTAGCCATCTACGACAAAGACACGCCGGAGCGGTGGCACAACCTCGCCAGAGCCGTCGGCGGCAAGACGGTGGAGGAAGTCAAACGCCACTACGAAAGGCTCGTTGAAGATGTCAACAAGATCGAGACCGGCCAAGTTCCTTTCCCTAATTACAGAAGATCCGGACCTGCCGGCAGAGGATTTTGCTTTGTTGACGAAGAACAACGGTAA ATGGGGTCTGGATCGAATTGGACGGCAAAGCAGAACAAAGTGTTTGAAAATGCTTTAGCCATCTACGACAAAGACACGCCGGAGCGGTGGCACAACCTCGCCAGAGCCGTCGGCGGCAAGACGGTGGAGGAAGTCAAACGCCACTACGAAAGGCTCGTTGAAGATGTCAACAAGATCGAGACCGGCCAAGTTCCTTTCCCTAATTACAGAAGATCCGGACCTGCCGGCAGAGGATTTTGCTTTGTTGACGAAGAACAACGGTAA MGSGSNWTAKQNKVFENALAIYDKDTPERWHNLARAVGGKTVEEVKRHYERLVEDVNKIETGQVPFPNYRRSGPAGRGFCFVDEEQR
BLAST of Cla020765 vs. Swiss-Prot
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.3e-25 Identity = 53/84 (63.10%), Postives = 61/84 (72.62%), Query Frame = 1
BLAST of Cla020765 vs. Swiss-Prot
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.8e-24 Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = 1
BLAST of Cla020765 vs. Swiss-Prot
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.8e-24 Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1
BLAST of Cla020765 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 5.3e-24 Identity = 49/66 (74.24%), Postives = 57/66 (86.36%), Query Frame = 1
BLAST of Cla020765 vs. Swiss-Prot
Match: RADL2_ARATH (Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN=RL2 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-23 Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = 1
BLAST of Cla020765 vs. TrEMBL
Match: A0A0A0LGK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G857030 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 2.4e-39 Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 1
BLAST of Cla020765 vs. TrEMBL
Match: B9R7U9_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1594410 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 2.4e-31 Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 1
BLAST of Cla020765 vs. TrEMBL
Match: A0A067KU42_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04433 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 4.1e-31 Identity = 64/85 (75.29%), Postives = 75/85 (88.24%), Query Frame = 1
BLAST of Cla020765 vs. TrEMBL
Match: E0CQD3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12530 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-30 Identity = 65/88 (73.86%), Postives = 75/88 (85.23%), Query Frame = 1
BLAST of Cla020765 vs. TrEMBL
Match: W9RQB4_9ROSA (DnaJ homolog subfamily C member 2 OS=Morus notabilis GN=L484_009009 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 2.7e-30 Identity = 65/86 (75.58%), Postives = 74/86 (86.05%), Query Frame = 1
BLAST of Cla020765 vs. NCBI nr
Match: gi|659131298|ref|XP_008465612.1| (PREDICTED: protein RADIALIS-like 3 [Cucumis melo]) HSP 1 Score: 179.9 bits (455), Expect = 2.0e-42 Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 1
BLAST of Cla020765 vs. NCBI nr
Match: gi|449460267|ref|XP_004147867.1| (PREDICTED: protein RADIALIS-like 3 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 3.4e-39 Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 1
BLAST of Cla020765 vs. NCBI nr
Match: gi|255538654|ref|XP_002510392.1| (PREDICTED: protein RADIALIS-like 3 [Ricinus communis]) HSP 1 Score: 142.5 bits (358), Expect = 3.5e-31 Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 1
BLAST of Cla020765 vs. NCBI nr
Match: gi|802593389|ref|XP_012071856.1| (PREDICTED: protein RADIALIS-like 3 [Jatropha curcas]) HSP 1 Score: 141.7 bits (356), Expect = 5.9e-31 Identity = 64/85 (75.29%), Postives = 75/85 (88.24%), Query Frame = 1
BLAST of Cla020765 vs. NCBI nr
Match: gi|731429572|ref|XP_010664694.1| (PREDICTED: protein RADIALIS-like 3 isoform X1 [Vitis vinifera]) HSP 1 Score: 140.2 bits (352), Expect = 1.7e-30 Identity = 65/88 (73.86%), Postives = 75/88 (85.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |