Cla020446 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla020446
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Auxin efflux carrier family protein (AHRD V1 ***- D7KYI6_ARALL); contains Interpro domain(s) IPR004776 Auxin efflux carrier
Location	Chr5 : 29780364 .. 29783008 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGAAGAATTCTTCAGATTGCTTTATGAAACAGACATAAAATCTAGTGAAGAAAACCTACTTATTGCAATTGTGCCTTTAATGAAGCTTCTCTGCCATGCAGTATTTGGACTAATTCTTGCCCACTCAAACAGAAAACTCATCCCAAAAGCAACATGTAGGTTACTTTCCAAACTTGTTTTTGCCTTGTTCTTGCCCTGCTTGATTTTTACTGAACTGGGCCAAAGTATCACGCTTGAGAGTTTCATTCAGTGGTGGTTTATTCCAGCAAATGTGCTACTCAGCACAGCCATTGGTTGTGCCCTTGGGTATTTGGTTGTTGCTAAATGTCATCCACCCCCTCATACCATACCTCAAATGACAGCATTTGGTTATACTGGAAATCTCTCTCTTGCAGTTGTGGGATCAGTTTGTCACACTGCAATGACCCTTTTGATCCTTCTCATACCATAATTCAGATTCAGGATTAACTTGAGGAGGTTGTTCAGCAACGTGAATCGTGCGATTTGGTGGATTAATTGTTCTGTCGAGATACTTGAATAGCTTGTCAGCCTTCAAGATTGGTGAAATTTGATACTTCCAGAGAACGTAATTGGTTGTATAAGGGGGAACAGACACAAGATTACAGATGGAGGAAGAGGAATTTTGAGGGAGTTGTGGATCGTGATACCATGAACAGTTCTCAGAAATATAAAATTCCTCTTCTATTATTCAATAACCAATCAGCCAGTATATATTTTAAATACAGAGGAATTAATCGAAGTTAAATAACTAACTCAACCTTAGTTAAGAATCTAAACAACTTTCCAGCAGAAATGACAAAACATTAATATACATTATTATTTTTGACCCAATTGTCACTCTAGTGGGGTGGCCTATGTCTCACTTGCTCAATGGGTTTCTGTGATTCTGACCTATACCTTCGTTTATCACATGATGGAACCTCCACTGGATTGTAGTGTAATTATAGATGAAGGCACTAAAATTGAAGAAGCACAAGGCGATAATGATATCCGCAGGCCACTCCTTCATCGCTAGCATTCCAACTACATCGCAAACTAAAAAATTTAAGGTAATAGATAAAGACAAATTTAATATTATATCATCTAACACTCTCCTTACTTGTGGACTTAGAATACGTAGAAAATCTAACAGGTGAAAATCAATTTTAAATGGAAAGAAAATGACATTGCAAGAGTTTGAATATAAGACATCTTCTGCTCTGATAACAACTTAAATTATCAATTGACCAAAAAATTTTAAGTTGATAGGTGAAGACACCTGTAATACTATATCATCTAACCCATACTACTTCTATTGATGTTGAGCTCCAAGGAGGCAGATGTACTGACAGTCCCAAATCCACCAAATGTTTGGCTGAGCCAGAGTAGTGAGGAGGACGAGAATTGTTGCTGAGCAAACTCCAATACAGCACGTCCTTCAACCCCCTACAATTGCTTCTCTAGTTACCATCATTATTGGGCTGATTCCGCAACTGAAATTCCCCATTATCATTTATCAAGGGCACTCTAGAAATTTTAGCCCGTGCCACAGTGCCTTCCGGTCATGCTCATTCTCGGGGGTATGCTTGCAGAGAGTGCCCAAATATTACATCTACATTGGGCCATCGAACTACAGTTGGTAGCGAGGCTCTAGATCCTTTGTCTGTTGGTAATTGGATTGTCTTTGTTGCATGTGAAATTTTCAATTTTGGACTAATCACAAATTGCTATATCATTTCTCTAAGTTAATAACAAAATTATAAATGATTAAATTGAGACTAATTAAAAGTGGACATGTGTCCTGAATTAAAATTGAAGACAAAAGTTGGTAGGTCATGATGATGTCACGTGTTTTTCTCATGACTATAAGATCGAATAAACCAATTTACTCTAGGTTAAATTAAGCCTAAAATTACGCTTAAATTGACCCGAAGTCCAACTAAACTCAAAGATTCAATAAGTTAGGCTCAAGGGCTAGGTCAATCAACCAAGCCCAAGCCGCAAAGCTCATGTGAGAACCCTGAAAATAGAGATTTTAGACTCTAGAAAGCCTAGAGAGAATTCTCTCAACAATGAGTAGTCTCCCTAAACTCCTTAAACTAGCAGTCCTTGAAAATGCAAGTTTTTCAAGACTTCAACTTCAAAAACATTAAAGCGTTTCACTTCTTCAAATCATACATACACATCAAATAGAGAGAATCAAAAGATTAAATATTAGAAACCGAACCACATCTGCATGAATTAAGATAAACACATTTTCAACTCCACAAAACATGTTTTTCTAGAAACCTTGTGCGAACAGTCGTATTAGCTAATAAGCCGATTTTTCTTGTCTTTGGGAATCCAATGTACAGGTTTGTTTTTCTGTTGCAATACACTGCACCAAGTGCTATTTTATTGGGAGAAAAATTGCTAGCTTCAGAAGATATGCAGTCCGGGTAAGTTTCTGCACTTCTCTTCTGGCAACACACATTTGCTCTCTTCCCCCTTTCTGTATATGTTGTTATATACTTCAAGATATTGCATACCTTTGAGGATTACTTGGTTGATATCTTGCTTCTGATGTTTGTTGAAAGTCTAATGATATTTGCTTGCACCATTGTTTATCCTGTCCTGTGTGCTCTTGTCTTAACAACGTGA

mRNA sequence

ATGTCCGAAGAATTCTTCAGATTGCTTTATGAAACAGACATAAAATCTAGTGAAGAAAACCTACTTATTGCAATTGTGCCTTTAATGAAGCTTCTCTGCCATGCAGTATTTGGACTAATTCTTGCCCACTCAAACAGAAAACTCATCCCAAAAGCAACATGTAGGTTACTTTCCAAACTTGTTTTTGCCTTGTTCTTGCCCTGCTTGATTTTTACTGAACTGGGCCAAAGTATCACGCTTGAGAGTTTCATTCAGTGGTGGTTTATTCCAGCAAATGTGCTACTCAGCACAGCCATTGGTTGTGCCCTTGGGTATTTGGTTGTTGCTAAATGTCATCCACCCCCTCATACCATACCTCAAATGACAGCATTTGGTTATACTGGAAATCTCTCTCTTGCAGTTGTGGGATCAATGAAGGCACTAAAATTGAAGAAGCACAAGGCGATAATGATATCCGCAGGCCACTCCTTCATCGCTAGCATTCCAACTACATCGCAAACTAAAAAATTTAAGGTTTGTTTTTCTGTTGCAATACACTGCACCAAGTGCTATTTTATTGGGAGAAAAATTGCTAGCTTCAGAAGATATGCAGTCCGGATATTGCATACCTTTGAGGATTACTTGGTTGATATCTTGCTTCTGATGTTTGTTGAAAGTCTAATGATATTTGCTTGCACCATTGTTTATCCTGTCCTGTGTGCTCTTGTCTTAACAACGTGA

Coding sequence (CDS)

ATGTCCGAAGAATTCTTCAGATTGCTTTATGAAACAGACATAAAATCTAGTGAAGAAAACCTACTTATTGCAATTGTGCCTTTAATGAAGCTTCTCTGCCATGCAGTATTTGGACTAATTCTTGCCCACTCAAACAGAAAACTCATCCCAAAAGCAACATGTAGGTTACTTTCCAAACTTGTTTTTGCCTTGTTCTTGCCCTGCTTGATTTTTACTGAACTGGGCCAAAGTATCACGCTTGAGAGTTTCATTCAGTGGTGGTTTATTCCAGCAAATGTGCTACTCAGCACAGCCATTGGTTGTGCCCTTGGGTATTTGGTTGTTGCTAAATGTCATCCACCCCCTCATACCATACCTCAAATGACAGCATTTGGTTATACTGGAAATCTCTCTCTTGCAGTTGTGGGATCAATGAAGGCACTAAAATTGAAGAAGCACAAGGCGATAATGATATCCGCAGGCCACTCCTTCATCGCTAGCATTCCAACTACATCGCAAACTAAAAAATTTAAGGTTTGTTTTTCTGTTGCAATACACTGCACCAAGTGCTATTTTATTGGGAGAAAAATTGCTAGCTTCAGAAGATATGCAGTCCGGATATTGCATACCTTTGAGGATTACTTGGTTGATATCTTGCTTCTGATGTTTGTTGAAAGTCTAATGATATTTGCTTGCACCATTGTTTATCCTGTCCTGTGTGCTCTTGTCTTAACAACGTGA

Protein sequence

MSEEFFRLLYETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLIFTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPHTIPQMTAFGYTGNLSLAVVGSMKALKLKKHKAIMISAGHSFIASIPTTSQTKKFKVCFSVAIHCTKCYFIGRKIASFRRYAVRILHTFEDYLVDILLLMFVESLMIFACTIVYPVLCALVLTT

Homology

[Close]

BLAST of Cla020446 vs. Swiss-Prot
Match: PILS2_ARATH (Protein PIN-LIKES 2 OS=Arabidopsis thaliana GN=PILS2 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 8.0e-38
Identity = 83/151 (54.97%), Postives = 103/151 (68.21%), Query Frame = 1


Query: 13  DIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLIFT 72
           ++ S   ++L  +VPL+KL+C  V GL+LAH   +L+P+AT RLLSKLVFALFLPCLIFT
Sbjct: 8   NVNSRVVDILSGVVPLLKLICLTVIGLLLAHPKTQLVPRATFRLLSKLVFALFLPCLIFT 67

Query: 73  ELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPH----TIPQMTAFGYTG 132
           ELG+SITL++ +QWWFIP NVLLS  +G  +GYLVV  C PPP     TI  MTAFG TG
Sbjct: 68  ELGESITLDNIVQWWFIPVNVLLSAVVGSLIGYLVVLICRPPPEFNRFTI-VMTAFGNTG 127

Query: 133 NLSLAVVGSMKALKLKKHKAIMISAGHSFIA 160
           NL LA+V S+   K         S G S+++
Sbjct: 128 NLLLAIVSSVCHTKTNPFGPNCNSRGVSYVS 157

[Close]

BLAST of Cla020446 vs. Swiss-Prot
Match: PILS6_ARATH (Protein PIN-LIKES 6 OS=Arabidopsis thaliana GN=PILS6 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.3e-19
Identity = 47/120 (39.17%), Postives = 74/120 (61.67%), Query Frame = 1


Query: 23  IAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLIFTELGQSITLES 82
           IA++P+ K+      GL++A     ++P +  +LL+ LVF+L LPCLIF++LGQ++TL+ 
Sbjct: 30  IAVMPIAKVFTMCFLGLLMASKYVNILPPSGRKLLNGLVFSLLLPCLIFSQLGQAVTLQK 89

Query: 83  FIQWWFIPANVLLSTAIGCALGYLVVAKCHPP----PHTIPQMTAFGYTGNLSLAVVGSM 139
            +QWWFIP NV+L T  G  +G++V +   PP      TI Q+   G  GN+ L ++ ++
Sbjct: 90  MLQWWFIPVNVVLGTISGSIIGFIVASIVRPPYPYFKFTIIQI-GVGNIGNVPLVLLAAL 148

[Close]

BLAST of Cla020446 vs. Swiss-Prot
Match: PILS7_ARATH (Protein PIN-LIKES 7 OS=Arabidopsis thaliana GN=PILS7 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 46/120 (38.33%), Postives = 69/120 (57.50%), Query Frame = 1


Query: 19  ENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLIFTELGQSI 78
           E L +A +P++++L  +V G  LA     L+   T R ++KLVF +F PC++F  L +++
Sbjct: 5   ELLEVASMPIVQVLLISVLGAFLATDYCSLLSADTRRSVNKLVFVVFTPCIMFANLAETV 64

Query: 79  TLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPH---TIPQMTAFGYTGNLSLAVV 136
           TL+  I WWF+P NV ++  +G  LG+LVV   +P P     I    A G  GNL L +V
Sbjct: 65  TLQDIISWWFMPINVGITFLVGGILGWLVVKLLNPKPQLHGLIIATCASGNMGNLMLILV 124

[Close]

BLAST of Cla020446 vs. Swiss-Prot
Match: PILS5_ARATH (Protein PIN-LIKES 5 OS=Arabidopsis thaliana GN=PILS5 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.5e-15
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1


Query: 21  LLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLIFTELGQSITL 80
           L +A +P++++L  ++ G  +A    KL P      ++K+VF LF P L+F  L Q++TL
Sbjct: 7   LEVASMPVIQVLFMSLVGAFMASDRCKLFPVEARNSMNKVVFVLFAPALMFANLAQTVTL 66

Query: 81  ESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPH---TIPQMTAFGYTGNLSLAVV 136
           E  I WWF+P N+ L+  IG  LG+LVV    PPP+    I    + G  GNL + +V
Sbjct: 67  EDIISWWFMPVNMGLTFLIGGLLGWLVVKILKPPPYLEGLIVATCSAGNMGNLPIILV 124

[Close]

BLAST of Cla020446 vs. Swiss-Prot
Match: PILS1_ARATH (Protein PIN-LIKES 1 OS=Arabidopsis thaliana GN=PILS1 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.9e-11
Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 1


Query: 26  VPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLIFTELGQSITLESFIQ 85
           +P+ K+L     G  LA     ++     + L+ +VF +F P L+ + L ++IT ES ++
Sbjct: 100 IPVAKILLITGIGFYLALDQVNILNHDARKQLNNIVFYVFSPSLVASSLSETITYESMVK 159

Query: 86  WWFIPANVLLSTAIGCALGYLVVAKCHPPPH---TIPQMTAFGYTGNLSLAVV 136
            WF+P NVLL+  IG  LG++V+    PP H    I    A G  GN+ L ++
Sbjct: 160 MWFMPLNVLLTFIIGSFLGWIVIKITKPPSHLRGIIVGCCAAGNLGNMPLIII 212

[Close]

BLAST of Cla020446 vs. TrEMBL
Match: A0A0B2SXU6_GLYSO (Putative transporter C5D6.04 OS=Glycine soja GN=glysoja_045711 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-39
Identity = 86/133 (64.66%), Postives = 103/133 (77.44%), Query Frame = 1


Query: 9   LYETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPC 68
           +YE  ++SS  +L  A+VPL+KLLC  V GL+LA+   + IPKAT +LLSKLVFALFLPC
Sbjct: 1   MYENTMRSSGADLTAAMVPLLKLLCLTVIGLLLANPTMQFIPKATFKLLSKLVFALFLPC 60

Query: 69  LIFTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPHTIP---QMTAFG 128
           LIFTELG+SITLE+F+ WWFIP NVL+STA+GC LG+LVV  CHPPP        MT FG
Sbjct: 61  LIFTELGESITLENFVDWWFIPVNVLVSTALGCLLGFLVVIICHPPPELTRFTIIMTGFG 120

Query: 129 YTGNLSLAVVGSM 139
            TGNL LAVVGS+
Sbjct: 121 NTGNLLLAVVGSV 133

[Close]

BLAST of Cla020446 vs. TrEMBL
Match: I1N7B8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G072900 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-39
Identity = 86/133 (64.66%), Postives = 103/133 (77.44%), Query Frame = 1


Query: 9   LYETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPC 68
           +YE  ++SS  +L  A+VPL+KLLC  V GL+LA+   + IPKAT +LLSKLVFALFLPC
Sbjct: 1   MYENTMRSSGADLTAAMVPLLKLLCLTVIGLLLANPTMQFIPKATFKLLSKLVFALFLPC 60

Query: 69  LIFTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPHTIP---QMTAFG 128
           LIFTELG+SITLE+F+ WWFIP NVL+STA+GC LG+LVV  CHPPP        MT FG
Sbjct: 61  LIFTELGESITLENFVDWWFIPVNVLVSTALGCLLGFLVVIICHPPPELTRFTIIMTGFG 120

Query: 129 YTGNLSLAVVGSM 139
            TGNL LAVVGS+
Sbjct: 121 NTGNLLLAVVGSV 133

[Close]

BLAST of Cla020446 vs. TrEMBL
Match: A0A059BG04_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02203 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.7e-39
Identity = 90/140 (64.29%), Postives = 110/140 (78.57%), Query Frame = 1


Query: 6   FRLL---YETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVF 65
           FR+L   Y+  +KSS +++L AI+PLMKLL   V GLILAH  +++IP+AT +LLSKLVF
Sbjct: 2   FRVLAEVYQDGMKSSGQDVLSAIIPLMKLLSLTVIGLILAHPRKQIIPRATFKLLSKLVF 61

Query: 66  ALFLPCLIFTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPH----TI 125
           ALFLPCLIFTELG+S+TLE+ +QWWFIP NVL++T +GC LGYLVV  C PPP     TI
Sbjct: 62  ALFLPCLIFTELGESMTLENILQWWFIPVNVLVTTIVGCILGYLVVIICRPPPQFNRFTI 121

Query: 126 PQMTAFGYTGNLSLAVVGSM 139
             MTAFG TGNL LAVVGS+
Sbjct: 122 -IMTAFGNTGNLPLAVVGSV 140

[Close]

BLAST of Cla020446 vs. TrEMBL
Match: C6T7H7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.6e-39
Identity = 85/131 (64.89%), Postives = 101/131 (77.10%), Query Frame = 1


Query: 11  ETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLI 70
           E  ++S+  +L  AIVPL+KLLC  V GL+LA+   + IPKAT +LLSKLVFALFLPCLI
Sbjct: 3   ENTVRSAGADLTAAIVPLLKLLCLTVIGLLLANPTMQFIPKATFKLLSKLVFALFLPCLI 62

Query: 71  FTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPHTIP---QMTAFGYT 130
           FTELG+SITLE+F+ WWFIP NVL+STA+GC LG+LVV  CHPPP        MT FG T
Sbjct: 63  FTELGESITLENFVDWWFIPVNVLVSTALGCLLGFLVVIICHPPPELTRFTIIMTGFGNT 122

Query: 131 GNLSLAVVGSM 139
           GNL LAVVGS+
Sbjct: 123 GNLLLAVVGSV 133

[Close]

BLAST of Cla020446 vs. TrEMBL
Match: K7LDB3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G116100 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.6e-39
Identity = 85/131 (64.89%), Postives = 101/131 (77.10%), Query Frame = 1


Query: 11  ETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLI 70
           E  ++S+  +L  AIVPL+KLLC  V GL+LA+   + IPKAT +LLSKLVFALFLPCLI
Sbjct: 3   ENTVRSAGADLTAAIVPLLKLLCLTVIGLLLANPTMQFIPKATFKLLSKLVFALFLPCLI 62

Query: 71  FTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPHTIP---QMTAFGYT 130
           FTELG+SITLE+F+ WWFIP NVL+STA+GC LG+LVV  CHPPP        MT FG T
Sbjct: 63  FTELGESITLENFVDWWFIPVNVLVSTALGCLLGFLVVIICHPPPELTRFTIIMTGFGNT 122

Query: 131 GNLSLAVVGSM 139
           GNL LAVVGS+
Sbjct: 123 GNLLLAVVGSV 133

[Close]

BLAST of Cla020446 vs. NCBI nr
Match: gi|1009155125|ref|XP_015895543.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized transporter YBR287W [Ziziphus jujuba])

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40
Identity = 87/141 (61.70%), Postives = 107/141 (75.89%), Query Frame = 1


Query: 1   MSEEFFRLLYETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKL 60
           M   +    Y+ +++SS EN++ AIVPLMKL+   + GL LAH   ++IP+AT +LLSKL
Sbjct: 1   MISRYLAAFYQENVQSSGENVMSAIVPLMKLISLTLIGLFLAHPKTQMIPRATFKLLSKL 60

Query: 61  VFALFLPCLIFTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPHTIP- 120
           VFALFLPCLIFTELG+SITL++F++WWFIP NVL+STAIGC LGYLVV  C PPP     
Sbjct: 61  VFALFLPCLIFTELGESITLDNFVRWWFIPVNVLISTAIGCVLGYLVVIVCRPPPQLTRF 120

Query: 121 --QMTAFGYTGNLSLAVVGSM 139
              MTAFG TGNL LAVVGS+
Sbjct: 121 TIIMTAFGNTGNLPLAVVGSV 141

[Close]

BLAST of Cla020446 vs. NCBI nr
Match: gi|356571384|ref|XP_003553857.1| (PREDICTED: uncharacterized transporter YBR287W-like [Glycine max])

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 86/133 (64.66%), Postives = 103/133 (77.44%), Query Frame = 1


Query: 9   LYETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPC 68
           +YE  ++SS  +L  A+VPL+KLLC  V GL+LA+   + IPKAT +LLSKLVFALFLPC
Sbjct: 1   MYENTMRSSGADLTAAMVPLLKLLCLTVIGLLLANPTMQFIPKATFKLLSKLVFALFLPC 60

Query: 69  LIFTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPHTIP---QMTAFG 128
           LIFTELG+SITLE+F+ WWFIP NVL+STA+GC LG+LVV  CHPPP        MT FG
Sbjct: 61  LIFTELGESITLENFVDWWFIPVNVLVSTALGCLLGFLVVIICHPPPELTRFTIIMTGFG 120

Query: 129 YTGNLSLAVVGSM 139
            TGNL LAVVGS+
Sbjct: 121 NTGNLLLAVVGSV 133

[Close]

BLAST of Cla020446 vs. NCBI nr
Match: gi|702420502|ref|XP_010066648.1| (PREDICTED: uncharacterized transporter YBR287W [Eucalyptus grandis])

HSP 1 Score: 171.0 bits (432), Expect = 2.5e-39
Identity = 90/140 (64.29%), Postives = 110/140 (78.57%), Query Frame = 1


Query: 6   FRLL---YETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVF 65
           FR+L   Y+  +KSS +++L AI+PLMKLL   V GLILAH  +++IP+AT +LLSKLVF
Sbjct: 2   FRVLAEVYQDGMKSSGQDVLSAIIPLMKLLSLTVIGLILAHPRKQIIPRATFKLLSKLVF 61

Query: 66  ALFLPCLIFTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPH----TI 125
           ALFLPCLIFTELG+S+TLE+ +QWWFIP NVL++T +GC LGYLVV  C PPP     TI
Sbjct: 62  ALFLPCLIFTELGESMTLENILQWWFIPVNVLVTTIVGCILGYLVVIICRPPPQFNRFTI 121

Query: 126 PQMTAFGYTGNLSLAVVGSM 139
             MTAFG TGNL LAVVGS+
Sbjct: 122 -IMTAFGNTGNLPLAVVGSV 140

[Close]

BLAST of Cla020446 vs. NCBI nr
Match: gi|959092588|ref|NP_001304437.1| (uncharacterized protein LOC100786253 [Glycine max])

HSP 1 Score: 169.1 bits (427), Expect = 9.5e-39
Identity = 85/131 (64.89%), Postives = 101/131 (77.10%), Query Frame = 1


Query: 11  ETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLI 70
           E  ++S+  +L  AIVPL+KLLC  V GL+LA+   + IPKAT +LLSKLVFALFLPCLI
Sbjct: 3   ENTVRSAGADLTAAIVPLLKLLCLTVIGLLLANPTMQFIPKATFKLLSKLVFALFLPCLI 62

Query: 71  FTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPHTIP---QMTAFGYT 130
           FTELG+SITLE+F+ WWFIP NVL+STA+GC LG+LVV  CHPPP        MT FG T
Sbjct: 63  FTELGESITLENFVDWWFIPVNVLVSTALGCLLGFLVVIICHPPPELTRFTIIMTGFGNT 122

Query: 131 GNLSLAVVGSM 139
           GNL LAVVGS+
Sbjct: 123 GNLLLAVVGSV 133

[Close]

BLAST of Cla020446 vs. NCBI nr
Match: gi|356530722|ref|XP_003533929.1| (PREDICTED: uncharacterized transporter YBR287W-like [Glycine max])

HSP 1 Score: 169.1 bits (427), Expect = 9.5e-39
Identity = 85/131 (64.89%), Postives = 101/131 (77.10%), Query Frame = 1


Query: 11  ETDIKSSEENLLIAIVPLMKLLCHAVFGLILAHSNRKLIPKATCRLLSKLVFALFLPCLI 70
           E  ++S+  +L  AIVPL+KLLC  V GL+LA+   + IPKAT +LLSKLVFALFLPCLI
Sbjct: 3   ENTVRSAGADLTAAIVPLLKLLCLTVIGLLLANPTMQFIPKATFKLLSKLVFALFLPCLI 62

Query: 71  FTELGQSITLESFIQWWFIPANVLLSTAIGCALGYLVVAKCHPPPHTIP---QMTAFGYT 130
           FTELG+SITLE+F+ WWFIP NVL+STA+GC LG+LVV  CHPPP        MT FG T
Sbjct: 63  FTELGESITLENFVDWWFIPVNVLVSTALGCLLGFLVVIICHPPPELTRFTIIMTGFGNT 122

Query: 131 GNLSLAVVGSM 139
           GNL LAVVGS+
Sbjct: 123 GNLLLAVVGSV 133

The following BLAST results are available for this feature:

BLAST of Cla020446 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PILS2_ARATH	8.0e-38	54.97	Protein PIN-LIKES 2 OS=Arabidopsis thaliana GN=PILS2 PE=2 SV=1	[more]
PILS6_ARATH	8.3e-19	39.17	Protein PIN-LIKES 6 OS=Arabidopsis thaliana GN=PILS6 PE=2 SV=1	[more]
PILS7_ARATH	1.9e-15	38.33	Protein PIN-LIKES 7 OS=Arabidopsis thaliana GN=PILS7 PE=2 SV=1	[more]
PILS5_ARATH	2.5e-15	38.14	Protein PIN-LIKES 5 OS=Arabidopsis thaliana GN=PILS5 PE=2 SV=1	[more]
PILS1_ARATH	4.9e-11	33.63	Protein PIN-LIKES 1 OS=Arabidopsis thaliana GN=PILS1 PE=2 SV=1	[more]

BLAST of Cla020446 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B2SXU6_GLYSO	1.0e-39	64.66	Putative transporter C5D6.04 OS=Glycine soja GN=glysoja_045711 PE=4 SV=1	[more]
I1N7B8_SOYBN	1.0e-39	64.66	Uncharacterized protein OS=Glycine max GN=GLYMA_19G072900 PE=4 SV=1	[more]
A0A059BG04_EUCGR	1.7e-39	64.29	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02203 PE=4 SV=1	[more]
C6T7H7_SOYBN	6.6e-39	64.89	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
K7LDB3_SOYBN	6.6e-39	64.89	Uncharacterized protein OS=Glycine max GN=GLYMA_09G116100 PE=4 SV=1	[more]

BLAST of Cla020446 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1009155125\|ref\|XP_015895543.1\|	1.0e-40	61.70	PREDICTED: LOW QUALITY PROTEIN: uncharacterized transporter YBR287W [Ziziphus ju...	[more]
gi\|356571384\|ref\|XP_003553857.1\|	1.5e-39	64.66	PREDICTED: uncharacterized transporter YBR287W-like [Glycine max]	[more]
gi\|702420502\|ref\|XP_010066648.1\|	2.5e-39	64.29	PREDICTED: uncharacterized transporter YBR287W [Eucalyptus grandis]	[more]
gi\|959092588\|ref\|NP_001304437.1\|	9.5e-39	64.89	uncharacterized protein LOC100786253 [Glycine max]	[more]
gi\|356530722\|ref\|XP_003533929.1\|	9.5e-39	64.89	PREDICTED: uncharacterized transporter YBR287W-like [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004776	Mem_trans

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0015976	carbon utilization
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
biological_process	GO:0010315	auxin efflux
biological_process	GO:0010252	auxin homeostasis
biological_process	GO:0010311	lateral root formation
biological_process	GO:0040009	regulation of growth rate
biological_process	GO:0009733	response to auxin
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004751	ribose-5-phosphate isomerase activity
molecular_function	GO:0010329	auxin efflux transmembrane transporter activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU07752	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla020446	Cla020446.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU07752	WMU07752	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004776	Membrane transport protein	PFAM	PF03547	Mem_trans	coord: 25..139 score: 5.5
None	No IPR available	PANTHER	PTHR31419	FAMILY NOT NAMED	coord: 5..138 score: 7.1
None	No IPR available	PANTHER	PTHR31419:SF2	AUXIN EFFLUX CARRIER FAMILY PROTEIN	coord: 5..138 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla020446	Cla97C01G006470	Watermelon (97103) v2	wmwmbB195
Cla020446	Cla97C05G103970	Watermelon (97103) v2	wmwmbB207
Cla020446	ClCG01G006160	Watermelon (Charleston Gray)	wcgwmB139
Cla020446	CSPI05G19670	Wild cucumber (PI 183967)	cpiwmB405
Cla020446	Cucsa.280430	Cucumber (Gy14) v1	cgywmB511
Cla020446	CmaCh15G009510	Cucurbita maxima (Rimu)	cmawmB270
Cla020446	CmoCh18G009820	Cucurbita moschata (Rifu)	cmowmB365
Cla020446	CmoCh15G009910	Cucurbita moschata (Rifu)	cmowmB259
Cla020446	Lsi09G006520	Bottle gourd (USVL1VR-Ls)	lsiwmB025
Cla020446	Cp4.1LG13g03760	Cucurbita pepo (Zucchini)	cpewmB178
Cla020446	Cp4.1LG09g03360	Cucurbita pepo (Zucchini)	cpewmB031
Cla020446	CsGy5G019170	Cucumber (Gy14) v2	cgybwmB372
Cla020446	MELO3C005311.2	Melon (DHL92) v3.6.1	medwmB016
Cla020446	Carg19023	Silver-seed gourd	carwmB1050
Cla020446	CsaV3_5G028500	Cucumber (Chinese Long) v3	cucwmB424
Cla020446	Bhi12G000776	Wax gourd	wgowmB072

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla020446	Cla003919	Watermelon (97103) v1	wmwmB128

The following block(s) are covering this gene:


Gene	Organism	Block
Cla020446	Cucurbita pepo (Zucchini)	cpewmB427
Cla020446	Bottle gourd (USVL1VR-Ls)	lsiwmB312
Cla020446	Cucumber (Gy14) v2	cgybwmB377
Cla020446	Melon (DHL92) v3.6.1	medwmB061
Cla020446	Silver-seed gourd	carwmB0842
Cla020446	Cucumber (Chinese Long) v3	cucwmB428
Cla020446	Wax gourd	wgowmB550
Cla020446	Cucumber (Gy14) v1	cgywmB524
Cla020446	Cucurbita maxima (Rimu)	cmawmB372
Cla020446	Cucurbita maxima (Rimu)	cmawmB699
Cla020446	Cucurbita moschata (Rifu)	cmowmB693
Cla020446	Melon (DHL92) v3.5.1	mewmB061
Cla020446	Watermelon (Charleston Gray)	wcgwmB285
Cla020446	Cucumber (Chinese Long) v2	cuwmB401