Cla020137 (gene) Watermelon (97103) v1

NameCla020137
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 *-*- D7KS48_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr2 : 23232329 .. 23234302 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCATCCGAGCGGATCCTCCCCTACCTCTCCTTTGTAGATGGGTATTTCTAAAAACCTTATTTTGTTGTCCATTCCATGCATTGTTCTATTAGTTTTTCTTTACTTCTGAGTCACTATGTGGTTACATCTGCCATCCATAAAAGGATTTATCAAAATATTTCCTCTAAAGCCTTGCATTCCTTTCACCAATACAAACAAGAGAAACCCACCACACGATTCAGTAGAAAGTCGAGGAAGGGAACTAAGGTAGTTAAGAAGGAAGAAGTAGATCCAAGGCTTTACACTAGAGATACAGTGAGGAACATATGCAATATTCTGAGAAATTGCTCATGGGGCTCTGCTCAAGGACACCTAGAGATGCTTCCTATAAGATGGGATTCTTATCTCATCAACCAAGTTCTGAAAACACATCCACCATTAGAGAAGACATGGTTATTCTTCAATTGGGCCTCTAGGCTGCAAATCTTCAAGCATGACCAGTATACGTACACGACGATGCTGGATATTTTTGGAGAAGCTGGGAGAATTTCATCCATGAATTATGTATTTCAACAGATGAAGGAGAAGGGGATAAAGATAGATGCAGTTACATATACTTCATTAATGCACTGGCGTTCAAATTCGGGAGATGTTGAGGGAGCAATAAAGGTTTGGAAGGAAATGAAAGCCAATGGCTGCTATCCGACGGTGGTTTCTTATACTGCTTATATAAAGATTTTGTTGGACATTGGCCAAATTAAGGAGGCCACTGATGCATACAAGGAGTTGCTTCAATCTGGGCTATCTCCAAGTTGTTGTACTTACACCATCTTAATGGAATACCTTATTGGAGAGGGTAAGTTTCTCTATTCATCCATGTTAGTGAGCTTCAAAATTTGCTGTTTATTTATTTTTTATTTTTTATTTTTTATTTTTTTTGGTTAGGTTAGGTTAACAGTTGTTTCTTTCATTGTACTTCCAGGTAAATGCAAAGAAGCCCTTGATATTTTTCACAAAATGCAAGATGCTGGAGTATATCCTGATAAAGCAGCTTGCAATATATTGATTCAGAAATGCTGTAAATCAGGGGAGAGGCTAGTAATGACACAAATTCTTGAATACATGAAAGAAAAACACCTTGTGCTTCGATACCCTGTGTTTCTTGAAGCACATGAAACTTTAAAAAGTTGTTCTTTTAGTTGTAACCTACTCAGGCAAGTTAATCCTCATATAGAAATTGAATCAGTCAGTAAGGGCGAGGTTGTGGATGTTAGTACAAGTTCTAATGTTGTTCCTTCCGATGTAGATTATGAGCTTGTGGCAATTCTGTTGAAGGAGAATAAACTTACTGCTATTGACTACATGCTCATTGGGACAGTAGATAAAAACATACGGTTGGATTCTTCAATTATTTTATCCATCATTGAGGTGAATTGCAAACATAATCGACCCAACGGTGCTCTACTGGCTTTCAACTATGGTTTTAAAAATGGTGTTAACATTGAGAGAAATCTGTATCTTTGCTTGATCGGAATTCTGATACGTTCGAGTATATATCCGAAGTTGTTGGAAATTGTTCAGAAAATGTATATGCAAGGGCATTGCCTTGGACTCTATTATGCCACACTTATACTTCATAGTCTTGGTAAAGCTGGAAAACCTCAATATGCTAGGAAAGTTTTCAATATGTTGCCTGAAGAATTGAAGTGCACTGCAACTTACACTGCTCTGGTTGATGCTTATTTCTCTGCTGGAAGTTCTGGTAAAGGGCTTAAAATTTACGAAACAATGCGAAAGAAAGGATTTACACCATCTTTAGGCACGTATAATGTGCTGTTAACTGGTCTTGTGAAGAATGGTAGAGTCGTTGAATTAGATATTTATAGAAGGGAGAAGAAGAGTTTTGAGATTAGTCATCATTCTCATCCCAATACAGTATTGGAGGAAGAAAGGATTTGTGATCTTCTTTTTGGAGAATTGGTATCTTGA

mRNA sequence

ATGGAACCATCCGAGCGGATCCTCCCCTACCTCTCCTTTGTAGATGGGATTTATCAAAATATTTCCTCTAAAGCCTTGCATTCCTTTCACCAATACAAACAAGAGAAACCCACCACACGATTCAGTAGAAAGTCGAGGAAGGGAACTAAGGTAGTTAAGAAGGAAGAAGTAGATCCAAGGCTTTACACTAGAGATACAGTGAGGAACATATGCAATATTCTGAGAAATTGCTCATGGGGCTCTGCTCAAGGACACCTAGAGATGCTTCCTATAAGATGGGATTCTTATCTCATCAACCAAGTTCTGAAAACACATCCACCATTAGAGAAGACATGGTTATTCTTCAATTGGGCCTCTAGGCTGCAAATCTTCAAGCATGACCAGTATACGTACACGACGATGCTGGATATTTTTGGAGAAGCTGGGAGAATTTCATCCATGAATTATGTATTTCAACAGATGAAGGAGAAGGGGATAAAGATAGATGCAGTTACATATACTTCATTAATGCACTGGCGTTCAAATTCGGGAGATGTTGAGGGAGCAATAAAGGTTTGGAAGGAAATGAAAGCCAATGGCTGCTATCCGACGGTGGTTTCTTATACTGCTTATATAAAGATTTTGTTGGACATTGGCCAAATTAAGGAGGCCACTGATGCATACAAGGAGTTGCTTCAATCTGGGCTATCTCCAAGTTGTTGTACTTACACCATCTTAATGGAATACCTTATTGGAGAGGGTAAATGCAAAGAAGCCCTTGATATTTTTCACAAAATGCAAGATGCTGGAGTATATCCTGATAAAGCAGCTTGCAATATATTGATTCAGAAATGCTGTAAATCAGGGGAGAGGCTAGTAATGACACAAATTCTTGAATACATGAAAGAAAAACACCTTGTGCTTCGATACCCTGTGTTTCTTGAAGCACATGAAACTTTAAAAAGTTGTTCTTTTAGTTGTAACCTACTCAGGCAAGTTAATCCTCATATAGAAATTGAATCAGTCAGTAAGGGCGAGGTTGTGGATGTTAGTACAAGTTCTAATGTTGTTCCTTCCGATGTAGATTATGAGCTTGTGGCAATTCTGTTGAAGGAGAATAAACTTACTGCTATTGACTACATGCTCATTGGGACAGTAGATAAAAACATACGGTTGGATTCTTCAATTATTTTATCCATCATTGAGGTGAATTGCAAACATAATCGACCCAACGGTGCTCTACTGGCTTTCAACTATGGTTTTAAAAATGGTGTTAACATTGAGAGAAATCTGTATCTTTGCTTGATCGGAATTCTGATACGTTCGAGTATATATCCGAAGTTGTTGGAAATTGTTCAGAAAATGTATATGCAAGGGCATTGCCTTGGACTCTATTATGCCACACTTATACTTCATAGTCTTGGTAAAGCTGGAAAACCTCAATATGCTAGGAAAGTTTTCAATATGTTGCCTGAAGAATTGAAGTGCACTGCAACTTACACTGCTCTGGTTGATGCTTATTTCTCTGCTGGAAGTTCTGGTAAAGGGCTTAAAATTTACGAAACAATGCGAAAGAAAGGATTTACACCATCTTTAGGCACGTATAATGTGCTGTTAACTGGTCTTGTGAAGAATGGTAGAGTCGTTGAATTAGATATTTATAGAAGGGAGAAGAAGAGTTTTGAGATTAGTCATCATTCTCATCCCAATACAGTATTGGAGGAAGAAAGGATTTGTGATCTTCTTTTTGGAGAATTGGTATCTTGA

Coding sequence (CDS)

ATGGAACCATCCGAGCGGATCCTCCCCTACCTCTCCTTTGTAGATGGGATTTATCAAAATATTTCCTCTAAAGCCTTGCATTCCTTTCACCAATACAAACAAGAGAAACCCACCACACGATTCAGTAGAAAGTCGAGGAAGGGAACTAAGGTAGTTAAGAAGGAAGAAGTAGATCCAAGGCTTTACACTAGAGATACAGTGAGGAACATATGCAATATTCTGAGAAATTGCTCATGGGGCTCTGCTCAAGGACACCTAGAGATGCTTCCTATAAGATGGGATTCTTATCTCATCAACCAAGTTCTGAAAACACATCCACCATTAGAGAAGACATGGTTATTCTTCAATTGGGCCTCTAGGCTGCAAATCTTCAAGCATGACCAGTATACGTACACGACGATGCTGGATATTTTTGGAGAAGCTGGGAGAATTTCATCCATGAATTATGTATTTCAACAGATGAAGGAGAAGGGGATAAAGATAGATGCAGTTACATATACTTCATTAATGCACTGGCGTTCAAATTCGGGAGATGTTGAGGGAGCAATAAAGGTTTGGAAGGAAATGAAAGCCAATGGCTGCTATCCGACGGTGGTTTCTTATACTGCTTATATAAAGATTTTGTTGGACATTGGCCAAATTAAGGAGGCCACTGATGCATACAAGGAGTTGCTTCAATCTGGGCTATCTCCAAGTTGTTGTACTTACACCATCTTAATGGAATACCTTATTGGAGAGGGTAAATGCAAAGAAGCCCTTGATATTTTTCACAAAATGCAAGATGCTGGAGTATATCCTGATAAAGCAGCTTGCAATATATTGATTCAGAAATGCTGTAAATCAGGGGAGAGGCTAGTAATGACACAAATTCTTGAATACATGAAAGAAAAACACCTTGTGCTTCGATACCCTGTGTTTCTTGAAGCACATGAAACTTTAAAAAGTTGTTCTTTTAGTTGTAACCTACTCAGGCAAGTTAATCCTCATATAGAAATTGAATCAGTCAGTAAGGGCGAGGTTGTGGATGTTAGTACAAGTTCTAATGTTGTTCCTTCCGATGTAGATTATGAGCTTGTGGCAATTCTGTTGAAGGAGAATAAACTTACTGCTATTGACTACATGCTCATTGGGACAGTAGATAAAAACATACGGTTGGATTCTTCAATTATTTTATCCATCATTGAGGTGAATTGCAAACATAATCGACCCAACGGTGCTCTACTGGCTTTCAACTATGGTTTTAAAAATGGTGTTAACATTGAGAGAAATCTGTATCTTTGCTTGATCGGAATTCTGATACGTTCGAGTATATATCCGAAGTTGTTGGAAATTGTTCAGAAAATGTATATGCAAGGGCATTGCCTTGGACTCTATTATGCCACACTTATACTTCATAGTCTTGGTAAAGCTGGAAAACCTCAATATGCTAGGAAAGTTTTCAATATGTTGCCTGAAGAATTGAAGTGCACTGCAACTTACACTGCTCTGGTTGATGCTTATTTCTCTGCTGGAAGTTCTGGTAAAGGGCTTAAAATTTACGAAACAATGCGAAAGAAAGGATTTACACCATCTTTAGGCACGTATAATGTGCTGTTAACTGGTCTTGTGAAGAATGGTAGAGTCGTTGAATTAGATATTTATAGAAGGGAGAAGAAGAGTTTTGAGATTAGTCATCATTCTCATCCCAATACAGTATTGGAGGAAGAAAGGATTTGTGATCTTCTTTTTGGAGAATTGGTATCTTGA

Protein sequence

MEPSERILPYLSFVDGIYQNISSKALHSFHQYKQEKPTTRFSRKSRKGTKVVKKEEVDPRLYTRDTVRNICNILRNCSWGSAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFHKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSCSFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLIGTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSSIYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEELKCTATYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVELDIYRREKKSFEISHHSHPNTVLEEERICDLLFGELVS
BLAST of Cla020137 vs. Swiss-Prot
Match: PP139_ARATH (Pentatricopeptide repeat-containing protein At2g01390 OS=Arabidopsis thaliana GN=At2g01390/At2g01380 PE=2 SV=2)

HSP 1 Score: 557.0 bits (1434), Expect = 2.5e-157
Identity = 288/559 (51.52%), Postives = 392/559 (70.13%), Query Frame = 1

Query: 22  SSKALHSFHQYKQEKPTTRFSRKSRKGTKVVKKEEV-DPRLYTRDTVRNICNILRNCSWG 81
           S K LHS  + K    + RFS+K     K+VK + + DP +YTRD V NI NIL+  +W 
Sbjct: 20  SVKLLHSLPRLKPTN-SKRFSQKP----KLVKTQTLPDPSVYTRDIVSNIYNILKYSNWD 79

Query: 82  SAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLDIFGE 141
           SAQ  L  L +RWDS++IN+VLK HPP++K WLFFNWA++++ FKHD +TYTTMLDIFGE
Sbjct: 80  SAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGE 139

Query: 142 AGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPTVVS 201
           AGRI SM  VF  MKEKG+ ID VTYTSL+HW S+SGDV+GA+++W+EM+ NGC PTVVS
Sbjct: 140 AGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVS 199

Query: 202 YTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFHKMQ 261
           YTAY+K+L   G+++EAT+ YKE+L+S +SP+C TYT+LMEYL+  GKC+EALDIF KMQ
Sbjct: 200 YTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQ 259

Query: 262 DAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSCSFSC 321
           + GV PDKAACNILI K  K GE   MT++L YMKE  +VLRYP+F+EA ETLK+   S 
Sbjct: 260 EIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESD 319

Query: 322 NLLRQVNPHIEIESVSKGEVVDVSTS--SNVVPSDVDYELVAILLKENKLTAIDYMLIGT 381
           +LLR+VN HI +ES+   ++ +  T+  ++   SD    + ++LL +  L A+D +L   
Sbjct: 320 DLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQM 379

Query: 382 VDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSSIY 441
            D+NI+LDS ++ +IIE NC   R  GA LAF+Y  + G++++++ YL LIG  +RS+  
Sbjct: 380 RDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNEL 439

Query: 442 PKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEELKCTATYTALVD 501
           PK++E+V++M    H LG Y   +++H LG   +P+ A  VF++LP++ K  A YTAL+D
Sbjct: 440 PKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLLPDDQKGVAAYTALMD 499

Query: 502 AYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRV-VELDIYRREKKSFEIS 561
            Y SAGS  K +KI   MR++   PSLGTY+VLL+GL K      E+ + R+EKKS   S
Sbjct: 500 VYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGLEKTSDFQKEVALLRKEKKSLVAS 559

Query: 562 HHSHPNTVLEEERICDLLF 577
                N V  E++ICDLLF
Sbjct: 560 ARFREN-VHVEDKICDLLF 572

BLAST of Cla020137 vs. Swiss-Prot
Match: PP123_ARATH (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.1e-27
Identity = 78/238 (32.77%), Postives = 115/238 (48.32%), Query Frame = 1

Query: 41  FSRKSRKGTKVVKKEEVDPRLYTRD--TVRNICNILRNCSWG-SAQGHLEMLPIRWDSYL 100
           F + SR+  KV  +    PR +      V N+ +ILR   WG +A+  L     R D+Y 
Sbjct: 269 FGKPSREMMKVTPRTAPTPRQHCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQ 328

Query: 101 INQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEK 160
            NQVLK          FF W  R   FKHD +TYTTM+   G A +   +N +  +M   
Sbjct: 329 ANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRD 388

Query: 161 GIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPTVVSYTAYIKILLDIGQIKEA 220
           G K + VTY  L+H    +  ++ A+ V+ +M+  GC P  V+Y   I I    G +  A
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 448

Query: 221 TDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFHKMQDAGVYPDKAACNILI 276
            D Y+ + ++GLSP   TY++++  L   G    A  +F +M   G  P+    NI+I
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506


HSP 2 Score: 83.2 bits (204), Expect = 1.0e-14
Identity = 45/156 (28.85%), Postives = 80/156 (51.28%), Query Frame = 1

Query: 127 DQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVW 186
           D+ TY T++DI  +AG +     ++Q+M+E G+  D  TY+ +++    +G +  A +++
Sbjct: 428 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLF 487

Query: 187 KEMKANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGE 246
            EM   GC P +V++   I +       + A   Y+++  +G  P   TY+I+ME L   
Sbjct: 488 CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547

Query: 247 GKCKEALDIFHKMQDAGVYPDKAACNILIQKCCKSG 283
           G  +EA  +F +MQ     PD+    +L+    K+G
Sbjct: 548 GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583


HSP 3 Score: 58.2 bits (139), Expect = 3.6e-07
Identity = 35/149 (23.49%), Postives = 67/149 (44.97%), Query Frame = 1

Query: 130 TYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEM 189
           T+  M+ +  +A    +   +++ M+  G + D VTY+ +M    + G +E A  V+ EM
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560

Query: 190 KANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKC 249
           +     P    Y   + +    G + +A   Y+ +LQ+GL P+  T   L+   +   + 
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 620

Query: 250 KEALDIFHKMQDAGVYPDKAACNILIQKC 279
            EA ++   M   G++P      +L+  C
Sbjct: 621 SEAYNLLQSMLALGLHPSLQTYTLLLSCC 649


HSP 4 Score: 44.3 bits (103), Expect = 5.3e-03
Identity = 28/100 (28.00%), Postives = 45/100 (45.00%), Query Frame = 1

Query: 200 SYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFHKM 259
           +YT  +  L    Q  E      E+++ G  P+  TY  L+         KEA+++F++M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420

Query: 260 QDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHL 300
           Q+AG  PD+     LI    K+G   +   + + M+E  L
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460


HSP 5 Score: 38.9 bits (89), Expect = 2.2e-01
Identity = 31/122 (25.41%), Postives = 55/122 (45.08%), Query Frame = 1

Query: 428 LIGILIRSSIYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVF------N 487
           +I +  ++  Y   L++ + M   G        ++++  LG  G  + A  VF      N
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564

Query: 488 MLPEELKCTATYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRV 544
            +P+E      Y  LVD +  AG+  K  + Y+ M + G  P++ T N LL+  ++  R+
Sbjct: 565 WVPDE----PVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 622

BLAST of Cla020137 vs. Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.3e-25
Identity = 71/216 (32.87%), Postives = 107/216 (49.54%), Query Frame = 1

Query: 67  VRNICNILRNCSWG-SAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFK 126
           V N+ ++LR   WG +A+  L+ L +R D+Y  NQVLK          FF W  R   FK
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361

Query: 127 HDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKV 186
           HD +TYTTM+   G A +  ++N +  +M   G + + VTY  L+H    +  +  A+ V
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421

Query: 187 WKEMKANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIG 246
           + +M+  GC P  V+Y   I I    G +  A D Y+ +   GLSP   TY++++  L  
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481

Query: 247 EGKCKEALDIFHKMQDAGVYPDKAACNILIQKCCKS 282
            G    A  +F +M D G  P+    NI++    K+
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517


HSP 2 Score: 116.7 bits (291), Expect = 8.5e-25
Identity = 78/276 (28.26%), Postives = 126/276 (45.65%), Query Frame = 1

Query: 67  VRNICNILRNCSWG-SAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFK 126
           V N+ ++LR   WG +A+  L+ L +R D+Y  NQVLK          FF W  R   FK
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361

Query: 127 HDQYTYTTMLDIFGEAGRISSMNY-----------------------------------V 186
           HD +TYTTM+   G A +  ++N                                    V
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421

Query: 187 FQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPTVVSYTAYIKILLD 246
           F QM+E G K D VTY +L+   + +G ++ A+ +++ M+A G  P   +Y+  I  L  
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481

Query: 247 IGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFHKMQDAGVYPDKAA 306
            G +  A   + E++  G +P+  TY I+M+        + AL ++  MQ+AG  PDK  
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541

BLAST of Cla020137 vs. Swiss-Prot
Match: PP138_ARATH (Pentatricopeptide repeat-containing protein At2g01360 OS=Arabidopsis thaliana GN=At2g01360 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 6.5e-25
Identity = 62/168 (36.90%), Postives = 100/168 (59.52%), Query Frame = 1

Query: 406 ALLAFNYGFKNGVNIERNLYLCLIGILIRSSIYPKLLEIVQKMYMQGHCLGLYYATLILH 465
           A LA ++  + G+++E++ YL L G  +RS+   K++++V++M    H LG+Y+  +++H
Sbjct: 15  ASLALDWSLEMGIHLEKSAYLALAGNFLRSNELSKVIDVVKEMVKSQHSLGVYHGAMLIH 74

Query: 466 SLGKAGKPQYARKVFNMLPEELKCTATYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSL 525
            LG   +P  A +  ++LP++ K  + YTAL+D Y SAGS  K +KI   MR++   PSL
Sbjct: 75  MLGFGRRPSLAAEALDLLPDDQKGLSAYTALMDVYISAGSPEKAMKILGEMREREIMPSL 134

Query: 526 GTYNVLLTGLVKNGRVV-ELDIYRREKKSFEISHHSHPNTVLEEERIC 573
           GTY+VLL+GL K      E    R+E+KS  ++       V  E++IC
Sbjct: 135 GTYDVLLSGLEKTSDFQRETSSLRKEQKSL-VASTRFREIVHVEDKIC 181

BLAST of Cla020137 vs. Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.2e-24
Identity = 113/425 (26.59%), Postives = 185/425 (43.53%), Query Frame = 1

Query: 127 DQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVW 186
           D  TY  M+  + + G I     +  +M E G + D +   SL++    +  V+ A K++
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561

Query: 187 KEMKANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGE 246
             MK     PTVV+Y   +  L   G+I+EA + ++ ++Q G  P+  T+  L + L   
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621

Query: 247 GKCKEALDIFHKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVF 306
            +   AL +  KM D G  PD    N +I    K+G+          MK+    L YP F
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK----LVYPDF 681

Query: 307 LEAHETLKSCSFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYE-LVAILLKE 366
           +    TL      C LL  V     IE   K  + +   +    P+++ +E L+  +L E
Sbjct: 682 V----TL------CTLLPGVVKASLIEDAYK-IITNFLYNCADQPANLFWEDLIGSILAE 741

Query: 367 NKL-TAIDYMLIGTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKN-GVNIERN 426
             +  A+ +      +   R   SI++ II  +CKHN  +GA   F    K+ GV  +  
Sbjct: 742 AGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP 801

Query: 427 LYLCLIGILIRSSIYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNML 486
            Y  LIG L+ +     ++EI Q +++Q    G                          +
Sbjct: 802 TYNLLIGGLLEAD----MIEIAQDVFLQVKSTG-------------------------CI 861

Query: 487 PEELKCTATYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVE 546
           P+     ATY  L+DAY  +G   +  ++Y+ M       +  T+N++++GLVK G V +
Sbjct: 862 PD----VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 878

Query: 547 -LDIY 548
            LD+Y
Sbjct: 922 ALDLY 878


HSP 2 Score: 113.2 bits (282), Expect = 9.4e-24
Identity = 109/430 (25.35%), Postives = 181/430 (42.09%), Query Frame = 1

Query: 127 DQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVW 186
           D  TYT ++D    A ++     VF++MK    K D VTY +L+   S++ D++   + W
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351

Query: 187 KEMKANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGE 246
            EM+ +G  P VV++T  +  L   G   EA D    +   G+ P+  TY  L+  L+  
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411

Query: 247 GKCKEALDIFHKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVF 306
            +  +AL++F  M+  GV P      + I    KSG+ +   +  E MK K +       
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA------ 471

Query: 307 LEAHETLKSCSFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKEN 366
                 + +C+ S   L +     E + +  G + D+     +VP  V Y ++       
Sbjct: 472 ----PNIVACNASLYSLAKAGRDREAKQIFYG-LKDIG----LVPDSVTYNMMMKC---- 531

Query: 367 KLTAIDYMLIGTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYL 426
                 Y  +G +D+ I+L S ++                        +NG   +  +  
Sbjct: 532 ------YSKVGEIDEAIKLLSEMM------------------------ENGCEPDVIVVN 591

Query: 427 CLIGILIRSSIYPKLLEIVQKMY-MQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPE 486
            LI  L ++    +  ++  +M  M+     + Y TL L  LGK GK Q A ++F  + +
Sbjct: 592 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL-LAGLGKNGKIQEAIELFEGMVQ 651

Query: 487 ELKC---TATYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVV 546
           +  C   T T+  L D           LK+   M   G  P + TYN ++ GLVKNG+V 
Sbjct: 652 K-GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVK 670

Query: 547 ELDIYRREKK 553
           E   +  + K
Sbjct: 712 EAMCFFHQMK 670


HSP 3 Score: 109.8 bits (273), Expect = 1.0e-22
Identity = 113/465 (24.30%), Postives = 188/465 (40.43%), Query Frame = 1

Query: 81  SAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLDIFGE 140
           S  G+L ++        + + L+    LE+    F+   + +I K D  TY T+      
Sbjct: 107 SVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQK-RIIKRDTNTYLTIFKSLSV 166

Query: 141 AGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPTVVS 200
            G +    Y  ++M+E G  ++A +Y  L+H    S     A++V++ M   G  P++ +
Sbjct: 167 KGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT 226

Query: 201 YTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFHKMQ 260
           Y++ +  L     I       KE+   GL P+  T+TI +  L   GK  EA +I  +M 
Sbjct: 227 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 286

Query: 261 DAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSCSFSC 320
           D G  PD     +LI   C + +     ++ E MK      R+      + TL    FS 
Sbjct: 287 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG----RHKPDRVTYITLLD-RFSD 346

Query: 321 NLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLIGTVD 380
           N           E    G V DV T + +V +     L            +D M    + 
Sbjct: 347 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA-----LCKAGNFGEAFDTLDVMRDQGIL 406

Query: 381 KNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSSIYPK 440
            N+   +++I  ++ V    +R + AL  F      GV      Y+  I    +S     
Sbjct: 407 PNLHTYNTLICGLLRV----HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 466

Query: 441 LLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPE--ELKCTATYTALVD 500
            LE  +KM  +G    +      L+SL KAG+ + A+++F  L +   +  + TY  ++ 
Sbjct: 467 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 526

Query: 501 AYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVE 544
            Y   G   + +K+   M + G  P +   N L+  L K  RV E
Sbjct: 527 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556


HSP 4 Score: 87.8 bits (216), Expect = 4.2e-16
Identity = 95/424 (22.41%), Postives = 178/424 (41.98%), Query Frame = 1

Query: 121 LQIFKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVE 180
           L+ F+    TY++++   G+   I S+  + ++M+  G+K +  T+T  +     +G + 
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275

Query: 181 GAIKVWKEMKANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILM 240
            A ++ K M   GC P VV+YT  I  L    ++  A + ++++      P   TY  L+
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335

Query: 241 EYLIGEGKCKEALDIFHKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLV 300
           +              + +M+  G  PD     IL+   CK+G        L+ M+++ ++
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395

Query: 301 LRYPVFLEAHETLKSCSFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVA 360
                 L  + TL      C LLR       +E     E + V  ++      +DY    
Sbjct: 396 PN----LHTYNTL-----ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY-YGK 455

Query: 361 ILLKENKLTAIDYMLIGTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKN-GVN 420
                + L   + M    +  NI   ++ + S+     K  R   A   F YG K+ G+ 
Sbjct: 456 SGDSVSALETFEKMKTKGIAPNIVACNASLYSL----AKAGRDREAKQIF-YGLKDIGLV 515

Query: 421 IERNLYLCLIGILIRSSIYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKV 480
            +   Y  ++    +     + ++++ +M   G    +     ++++L KA +   A K+
Sbjct: 516 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 575

Query: 481 FNMLPE-ELKCT-ATYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVK 540
           F  + E +LK T  TY  L+      G   + ++++E M +KG  P+  T+N L   L K
Sbjct: 576 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 624

Query: 541 NGRV 542
           N  V
Sbjct: 636 NDEV 624


HSP 5 Score: 76.6 bits (187), Expect = 9.7e-13
Identity = 100/453 (22.08%), Postives = 180/453 (39.74%), Query Frame = 1

Query: 125 KHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIK 184
           K + YT+T  + + G AG+I+    + ++M ++G   D VTYT L+     +  ++ A +
Sbjct: 255 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 314

Query: 185 VWKEMKANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLI 244
           V+++MK     P  V+Y   +    D   +      + E+ + G  P   T+TIL++ L 
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374

Query: 245 GEGKCKEALDIFHKMQDAGVYPDKAACNILI---QKCCKSGERLVMTQILEYMKEKHLVL 304
             G   EA D    M+D G+ P+    N LI    +  +  + L +   +E +  K    
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434

Query: 305 RYPVF-------------LEAHETLK---------SCSFSCNLLRQVNPHIEIESVSKGE 364
            Y VF             LE  E +K         +C+ S   L +     E + +  G 
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG- 494

Query: 365 VVDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLIGTVDKNIRL-----------DSS 424
           + D+     +VP  V Y ++             Y  +G +D+ I+L           D  
Sbjct: 495 LKDI----GLVPDSVTYNMMMKC----------YSKVGEIDEAIKLLSEMMENGCEPDVI 554

Query: 425 IILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSSIYPKLLEIVQKM 484
           ++ S+I    K +R + A   F    +  +      Y  L+  L ++    + +E+ + M
Sbjct: 555 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 614

Query: 485 YMQGHCLGLYYATLILHSLGKAGKPQYARK-VFNMLPEELKCTA---TYTALVDAYFSAG 538
             +G          +   L K  +   A K +F M+  ++ C     TY  ++      G
Sbjct: 615 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM--DMGCVPDVFTYNTIIFGLVKNG 674


HSP 6 Score: 68.9 bits (167), Expect = 2.0e-10
Identity = 40/142 (28.17%), Postives = 70/142 (49.30%), Query Frame = 1

Query: 127  DQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVW 186
            D  TY+ ++D     GR+    + F+++KE G+  D V Y  +++    S  +E A+ ++
Sbjct: 960  DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019

Query: 187  KEMKAN-GCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIG 246
             EMK + G  P + +Y + I  L   G ++EA   Y E+ ++GL P+  T+  L+     
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079

Query: 247  EGKCKEALDIFHKMQDAGVYPD 268
             GK + A  ++  M   G  P+
Sbjct: 1080 SGKPEHAYAVYQTMVTGGFSPN 1101


HSP 7 Score: 68.2 bits (165), Expect = 3.5e-10
Identity = 87/402 (21.64%), Postives = 169/402 (42.04%), Query Frame = 1

Query: 137  IFGEAGRISSMNYVFQQMKEKGIKIDAVTY-TSLMHWRSNSGDVEGAIKVWKEM-KANGC 196
            I  EAG  +++++  +++   GI  D  +    ++ +     +V GA  ++++  K  G 
Sbjct: 723  ILAEAGIDNAVSFS-ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGV 782

Query: 197  YPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALD 256
             P + +Y   I  LL+   I+ A D + ++  +G  P   TY  L++     GK  E  +
Sbjct: 783  QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 842

Query: 257  IFHKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLK 316
            ++ +M       +    NI+I    K+G             +  L L Y +  +   +  
Sbjct: 843  LYKEMSTHECEANTITHNIVISGLVKAGN-----------VDDALDLYYDLMSDRDFSPT 902

Query: 317  SCSFSCNL--LRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTAID 376
            +C++   +  L +     E + + +G ++D     N    ++   L+    K  +  A  
Sbjct: 903  ACTYGPLIDGLSKSGRLYEAKQLFEG-MLDYGCRPNCAIYNI---LINGFGKAGEADAAC 962

Query: 377  YMLIGTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGIL 436
             +    V + +R D      +++  C   R +  L  F    ++G+N +   Y  +I  L
Sbjct: 963  ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1022

Query: 437  IRSSIYPKLLEIVQKMYM-QGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEE-LKCT 496
             +S    + L +  +M   +G    LY    ++ +LG AG  + A K++N +    L+  
Sbjct: 1023 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1082

Query: 497  A-TYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVL 532
              T+ AL+  Y  +G       +Y+TM   GF+P+ GTY  L
Sbjct: 1083 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108


HSP 8 Score: 54.7 bits (130), Expect = 4.0e-06
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 1

Query: 97  LINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKE 156
           LIN + K    +++ W  F     +++ K    TY T+L   G+ G+I     +F+ M +
Sbjct: 544 LINTLYKADR-VDEAWKMFMRMKEMKL-KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 603

Query: 157 KGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPTVVSYTAYIKILLDIGQIKE 216
           KG   + +T+ +L      + +V  A+K+  +M   GC P V +Y   I  L+  GQ+KE
Sbjct: 604 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 662

Query: 217 A 218
           A
Sbjct: 664 A 662

BLAST of Cla020137 vs. TrEMBL
Match: A0A0A0LJM3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G295410 PE=4 SV=1)

HSP 1 Score: 999.2 bits (2582), Expect = 2.1e-288
Identity = 493/565 (87.26%), Postives = 525/565 (92.92%), Query Frame = 1

Query: 17  IYQNISSKALHSFHQYKQEKPTTRFSRKSRKGTKVVKKEEVDPRLYTRDTVRNICNILRN 76
           IYQNISSK LHS HQYK++KP +RFSR+SRKGTKV KKEEV PRLYTRDTVRNICNILRN
Sbjct: 24  IYQNISSKCLHSLHQYKRDKPISRFSRQSRKGTKVAKKEEVIPRLYTRDTVRNICNILRN 83

Query: 77  CSWGSAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLD 136
           CSW SAQ HLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWAS LQ+FKHDQYTYTTMLD
Sbjct: 84  CSWASAQKHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASTLQVFKHDQYTYTTMLD 143

Query: 137 IFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYP 196
           IFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDV+GAIK+WKEMKANGC+P
Sbjct: 144 IFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVDGAIKLWKEMKANGCHP 203

Query: 197 TVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIF 256
           TVVSYTAYIKILLD GQI EAT  YK++LQSGLSP+CCTYTILMEYLIGEGKCKEALDIF
Sbjct: 204 TVVSYTAYIKILLDNGQINEATATYKKMLQSGLSPNCCTYTILMEYLIGEGKCKEALDIF 263

Query: 257 HKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSC 316
            KMQDAGVYPDKAACNILIQKCCKSGERLVMTQILE+MKE   VLRYPVF+EAHETLKSC
Sbjct: 264 SKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEFMKENRFVLRYPVFVEAHETLKSC 323

Query: 317 SFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLI 376
           S S  LL+QVNPH+EIES+SKGEVVDVST SN VP +VD EL+A+LLK+NKLTA+D+MLI
Sbjct: 324 SVSYALLKQVNPHMEIESISKGEVVDVSTGSNTVPPNVDNELLAMLLKDNKLTAVDHMLI 383

Query: 377 GTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSS 436
           G VDKNI+LDSSII SIIEVNCK NRPN ALLAF+Y  KN VNI+R LYL LIGILIRSS
Sbjct: 384 GIVDKNIQLDSSIIYSIIEVNCKSNRPNSALLAFDYCLKNSVNIKRKLYLDLIGILIRSS 443

Query: 437 IYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEELKCTATYTAL 496
           IYPKLLEIVQ+MY QGHCLGLY+ATLIL SLGKAGKPQYARKVFNMLPEELKCTATYTAL
Sbjct: 444 IYPKLLEIVQEMYTQGHCLGLYHATLILCSLGKAGKPQYARKVFNMLPEELKCTATYTAL 503

Query: 497 VDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVELDIYRREKKSFEI 556
           VD YFSAGSSGKGLKI+ETMRKKGFTPSLGTYNVLL GL KNGR VEL+IYRREKKSFEI
Sbjct: 504 VDGYFSAGSSGKGLKIFETMRKKGFTPSLGTYNVLLNGLAKNGRGVELNIYRREKKSFEI 563

Query: 557 SHHSHPNTVLEEERICDLLFGELVS 582
           SHHS  NT+L++ERICDLLFGELVS
Sbjct: 564 SHHSRLNTILDDERICDLLFGELVS 588

BLAST of Cla020137 vs. TrEMBL
Match: A0A0D2QLU1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G051500 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 7.9e-179
Identity = 312/554 (56.32%), Postives = 406/554 (73.29%), Query Frame = 1

Query: 24  KALHSFHQYKQEKPTTRFSRKSRKGTKV-VKKEEVDPRLYTRDTVRNICNILRNCSWGSA 83
           K LHS HQ K+  P T+   K  K  K  +K  +V+P++Y RDT+ NI  IL+  +W SA
Sbjct: 22  KFLHSLHQNKRRTPRTK--HKFTKALKTPMKPFDVEPKVYMRDTISNIYKILKYSTWESA 81

Query: 84  QGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLDIFGEAG 143
           +  L+ LPIRWDS+ +NQVLKTHPP+EK WLFFNW  +++ FKHDQ+TYTTMLDIFGEAG
Sbjct: 82  ETQLKQLPIRWDSFTVNQVLKTHPPMEKAWLFFNWVGKVKSFKHDQFTYTTMLDIFGEAG 141

Query: 144 RISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPTVVSYT 203
           R+SSM Y+FQQM+EKG+KIDAVTYTS++HW S SGDV+GA++ W+EM+  GC+PTVVSYT
Sbjct: 142 RVSSMKYLFQQMQEKGLKIDAVTYTSILHWLSKSGDVDGAVETWEEMRGKGCFPTVVSYT 201

Query: 204 AYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFHKMQDA 263
           AY+K+L D  ++KE T  YKE+LQSG+SP+C TYT+LMEYL G GK +EAL+IF KMQ+A
Sbjct: 202 AYMKVLFDNQRVKEGTAVYKEMLQSGISPNCHTYTVLMEYLFGAGKYEEALEIFSKMQEA 261

Query: 264 GVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSCSFSCNL 323
            V PDKAACNIL++KCCK+GE   + QIL+YMKE HLVLRYP+FL A ET K+      L
Sbjct: 262 RVKPDKAACNILVEKCCKAGETWPIIQILQYMKENHLVLRYPIFLLALETFKAAGERDAL 321

Query: 324 LRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLIGTVDKN 383
           LRQV+PHI +E +    VV+   +    PS +D  LV +LLK+  L A+D +L   +DKN
Sbjct: 322 LRQVHPHISVECIDNERVVEYKGNDFEDPSSLDRGLVWVLLKKQNLQAVDSLLTELMDKN 381

Query: 384 IRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSSIYPKLL 443
           I+LDS ++ +I+ VNC H R +GALL F Y  K G+ +ER  YL LIG LIRS+ +  ++
Sbjct: 382 IKLDSELMSAIVHVNCGHCRVDGALLTFKYSVKTGIKLERTAYLALIGCLIRSNTFTDIV 441

Query: 444 EIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEELKCTATYTALVDAYFS 503
           EIV +M   GH LG+Y A+L+++ LG A +P  A K+F+ LP++ KC ATYTALV  YF+
Sbjct: 442 EIVVEMTSTGHSLGVYLASLLIYRLGCARRPTCAAKIFDSLPDDQKCVATYTALVGVYFA 501

Query: 504 AGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVELDIYRREKKSFEISHHSHP 563
           AG++ KGLKIY+TMRKKG  PSLGTY VL+ GL K  RV   + YR+EKKS     +   
Sbjct: 502 AGTADKGLKIYKTMRKKGIYPSLGTYCVLVAGLEKLSRVSNAETYRKEKKSLRKDAYFR- 561

Query: 564 NTVLEEERICDLLF 577
            ++  EE+ICDLLF
Sbjct: 562 ESIPMEEKICDLLF 572

BLAST of Cla020137 vs. TrEMBL
Match: A0A061DFX4_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_000458 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 6.7e-178
Identity = 311/553 (56.24%), Postives = 408/553 (73.78%), Query Frame = 1

Query: 24  KALHSFHQYKQEKPTTRFSRKSRKGTKVVKKEEVDPRLYTRDTVRNICNILRNCSWGSAQ 83
           K LHSF Q+K E PT     K+ K    +K  EV+P++Y RDT+ NI  IL+  +W +A+
Sbjct: 22  KCLHSFDQHKPETPTKYKFTKTLKNP--MKPLEVEPKVYMRDTISNIYKILKYSTWDAAE 81

Query: 84  GHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLDIFGEAGR 143
             L+ L I+WDS+ INQVLKTHPP+EK WLFFNW  +++ FKHDQ+TYTTMLDIFGEAGR
Sbjct: 82  TQLKRLRIKWDSFTINQVLKTHPPMEKAWLFFNWVGKVKGFKHDQFTYTTMLDIFGEAGR 141

Query: 144 ISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPTVVSYTA 203
           +SSM Y+FQQM+EKG+KIDAV YTS++HW S S DV+GA+++W+EM+  GC+PTVVSYTA
Sbjct: 142 VSSMKYLFQQMQEKGLKIDAVAYTSVLHWLSKSRDVDGAVEMWEEMRGKGCFPTVVSYTA 201

Query: 204 YIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFHKMQDAG 263
           Y+K+L D  ++KE TD YKE+LQSG+SP+C TYT+LMEYL   GK +EAL+IF+KMQ+AG
Sbjct: 202 YMKVLFDNKRVKEGTDVYKEMLQSGISPNCHTYTVLMEYLFEAGKSEEALEIFNKMQEAG 261

Query: 264 VYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSCSFSCNLL 323
           V PDKAACNIL++KCCK+ E   MTQIL+YMKE +LVLRYP+FLEA ET K    S  LL
Sbjct: 262 VKPDKAACNILVEKCCKAAETRAMTQILQYMKENYLVLRYPIFLEALETFKVAGESNVLL 321

Query: 324 RQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLIGTVDKNI 383
           R+V+PHI +E +      +   +++  P   D  L+  LLK+  L AID +L   +DKNI
Sbjct: 322 REVHPHISVECIGNETEAEYKGNASEAPLSFDRGLMWALLKKQNLLAIDSLLTELMDKNI 381

Query: 384 RLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSSIYPKLLE 443
           RLDS +I +II++NC H R +G+LLAF Y  K G+N+ER  YL LIG LIRS+ +  ++E
Sbjct: 382 RLDSEMISTIIDINCNHCRLDGSLLAFKYSVKAGINLERAAYLTLIGSLIRSNTFTDVVE 441

Query: 444 IVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEELKCTATYTALVDAYFSA 503
           IV +M   GH  G+Y  +L+++ LG A +P  A K+FN+LP++ KC ATYTALV  YF+A
Sbjct: 442 IVVEMTRAGHSPGVYLGSLLIYRLGCARRPTCAAKIFNLLPDDQKCVATYTALVGVYFAA 501

Query: 504 GSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVELDIYRREKKSFEISHHSHPN 563
           G++ KGLKIY+TMR KG +PSLGTY VLL GL K GRV   + YR+EKKS +   +   +
Sbjct: 502 GTADKGLKIYKTMRSKGISPSLGTYCVLLAGLEKLGRVSTAETYRKEKKSLQKDAYFRES 561

Query: 564 TVLEEERICDLLF 577
             + EE+ICDLLF
Sbjct: 562 IPI-EEKICDLLF 571

BLAST of Cla020137 vs. TrEMBL
Match: F6GWZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01160 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 4.3e-177
Identity = 322/542 (59.41%), Postives = 397/542 (73.25%), Query Frame = 1

Query: 41  FSRKSRKGTKVVKKEEVDPRLYTRDTVRNICNILRNCSWGSAQGHLEMLPIRWDSYLINQ 100
           F R S+K  K  +KE VD ++Y RDT+ NI  ILR  +W SAQ  LE L IRWDSY +NQ
Sbjct: 48  FFRTSQKFRKPTEKENVDHKIYMRDTIGNISKILRYLTWDSAQEQLEKLSIRWDSYTVNQ 107

Query: 101 VLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIK 160
           VLK+HPP+EK WLFFNWASRL+ FKHDQ+TYTTMLDIFGEA RI SMNYVFQQM+EKGIK
Sbjct: 108 VLKSHPPMEKAWLFFNWASRLKGFKHDQFTYTTMLDIFGEARRIESMNYVFQQMQEKGIK 167

Query: 161 IDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPTVVSYTAYIKILLDIGQIKEATDA 220
            DAVTYTSLMHW SN GD+E A++VWKEMKA GC  TVVSYTAY+KIL D  ++KEA D 
Sbjct: 168 TDAVTYTSLMHWFSNDGDIERAVRVWKEMKAKGCCLTVVSYTAYMKILFDNKRVKEAADV 227

Query: 221 YKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFHKMQDAGVYPDKAACNILIQKCCK 280
           YKE+LQSG +P+C TYT+LME+L G GK K AL+IF +MQ+AGV PDKA CNILI+K CK
Sbjct: 228 YKEMLQSGCAPNCYTYTVLMEHLTGSGKYKAALEIFSRMQEAGVQPDKATCNILIEKFCK 287

Query: 281 SGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSCSFSCNLLRQVNPHIEIESVSKGEV 340
           +G+   +TQIL YMK+  LVLRYPV+LEA +TLK    S  LLRQVNPH+ +   SK E+
Sbjct: 288 TGQTWAITQILLYMKDNFLVLRYPVYLEALQTLKVAGESDILLRQVNPHLNVGLSSKEEI 347

Query: 341 VDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLIGTVDKNIRLDSSIILSIIEVNCKH 400
           V+   +   V S +D   V + L +    AID +L G + KN RLDS II  IIEVNC H
Sbjct: 348 VEFKETVADVHSTIDRGFVLLFLTKQNFYAIDCLLTGMIHKNTRLDSVIISQIIEVNCAH 407

Query: 401 NRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSSIYPKLLEIVQKMYMQGHCLGLYYA 460
            R NGALLAF Y  K G+NIER  YL L+G+ IR++ +PK+ +IV+KM   G  LG+Y  
Sbjct: 408 CRINGALLAFEYSVKMGINIERIAYLALMGVFIRANSFPKVADIVEKMVRAGISLGMYLG 467

Query: 461 TLILHSLGKAGKPQYARKVFNMLPEELKCTATYTALVDAYFSAGSSGKGLKIYETMRKKG 520
            L+++ LG A +P  A KVF +LP++ K TA YTAL+ AYFS+G+  KGLKIY+TM++K 
Sbjct: 468 ALLIYRLGCARRPGSAAKVFGLLPDDQKGTAAYTALISAYFSSGNVDKGLKIYKTMQRKR 527

Query: 521 FTPSLGTYNVLLTGLVKNGRVVELDIYRREKKSFEISHHSHPNTVLEEERICDLLF-GEL 580
             P+LGTYN+LL GL K GR  E +IYR+EKK+     HS  + V  +E+IC+LLF G L
Sbjct: 528 IHPALGTYNLLLAGLEKKGRAREAEIYRKEKKTLHTHGHSQ-DIVSMDEKICNLLFSGNL 587

Query: 581 VS 582
           VS
Sbjct: 588 VS 588

BLAST of Cla020137 vs. TrEMBL
Match: A0A0B0PHY7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_31667 PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 7.4e-177
Identity = 304/525 (57.90%), Postives = 395/525 (75.24%), Query Frame = 1

Query: 52  VKKEEVDPRLYTRDTVRNICNILRNCSWGSAQGHLEMLPIRWDSYLINQVLKTHPPLEKT 111
           +K  +V+P++Y RDT+ NIC IL+  +W SA+  L+ LPIRWDS+ +NQVLKTHPP+EK 
Sbjct: 1   MKPFDVEPKVYMRDTISNICKILKYSTWESAETQLKQLPIRWDSFTVNQVLKTHPPMEKA 60

Query: 112 WLFFNWASRLQIFKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMH 171
           WLFFNW  +++ FKHDQ+TYTTMLDIFGEAGR+SSM Y+FQQM+EKG+KIDAVTYTS++H
Sbjct: 61  WLFFNWVGKVKSFKHDQFTYTTMLDIFGEAGRVSSMKYLFQQMQEKGLKIDAVTYTSILH 120

Query: 172 WRSNSGDVEGAIKVWKEMKANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSP 231
           W S S DV+GA++ W+EM+  GC+PTVVSYTAY+K+L D  ++KE T  YKE+LQSG+SP
Sbjct: 121 WLSKSEDVDGAVETWEEMRGKGCFPTVVSYTAYMKVLFDNQRVKEGTAVYKEMLQSGISP 180

Query: 232 SCCTYTILMEYLIGEGKCKEALDIFHKMQDAGVYPDKAACNILIQKCCKSGERLVMTQIL 291
           +C TYT+LMEYL G GK +EAL+IF KMQ+A V PDKAACNIL++KCCK+GE   + QIL
Sbjct: 181 NCHTYTVLMEYLFGAGKYEEALEIFSKMQEARVMPDKAACNILVEKCCKAGETWPIIQIL 240

Query: 292 EYMKEKHLVLRYPVFLEAHETLKSCSFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVP 351
           +YMKE HLVLRYP+FL A ETLK+      LLRQV+PHI +E +  G VV+   +    P
Sbjct: 241 QYMKENHLVLRYPIFLLALETLKAAGERDALLRQVHPHISVECIDNGRVVEYKGNDFEDP 300

Query: 352 SDVDYELVAILLKENKLTAIDYMLIGTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFN 411
           S +D  LV +LLK+  L A+D +L   +DKNI+LDS ++ SI+ VNC H R  GALLAF 
Sbjct: 301 SSLDRGLVWVLLKKLNLQAVDSLLTELMDKNIKLDSELMSSIVHVNCGHCRVGGALLAFK 360

Query: 412 YGFKNGVNIERNLYLCLIGILIRSSIYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAG 471
           Y  K G+ +ER  YL LIG LIRS+ +  ++EIV +M   GH LG+Y A+L+++ LG A 
Sbjct: 361 YSVKTGIKLERTGYLALIGCLIRSNRFTDIVEIVVEMTSTGHSLGVYLASLLIYRLGCAR 420

Query: 472 KPQYARKVFNMLPEELKCTATYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVL 531
           +P  A K+F+ LP++ KC ATYTALV  YF+AG++ KGLKIY+ MRKKG  PSLGTY VL
Sbjct: 421 RPTCAAKIFDSLPDDQKCVATYTALVGVYFAAGTADKGLKIYKAMRKKGIYPSLGTYCVL 480

Query: 532 LTGLVKNGRVVELDIYRREKKSFEISHHSHPNTVLEEERICDLLF 577
           + GL K GRV   + YR+EKKS +   +    ++  EE+ICDLLF
Sbjct: 481 VAGLEKLGRVSNAETYRKEKKSLQKDAYFR-ESIPMEEKICDLLF 524

BLAST of Cla020137 vs. NCBI nr
Match: gi|778670108|ref|XP_011649371.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Cucumis sativus])

HSP 1 Score: 999.2 bits (2582), Expect = 3.0e-288
Identity = 493/565 (87.26%), Postives = 525/565 (92.92%), Query Frame = 1

Query: 17  IYQNISSKALHSFHQYKQEKPTTRFSRKSRKGTKVVKKEEVDPRLYTRDTVRNICNILRN 76
           IYQNISSK LHS HQYK++KP +RFSR+SRKGTKV KKEEV PRLYTRDTVRNICNILRN
Sbjct: 24  IYQNISSKCLHSLHQYKRDKPISRFSRQSRKGTKVAKKEEVIPRLYTRDTVRNICNILRN 83

Query: 77  CSWGSAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLD 136
           CSW SAQ HLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWAS LQ+FKHDQYTYTTMLD
Sbjct: 84  CSWASAQKHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASTLQVFKHDQYTYTTMLD 143

Query: 137 IFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYP 196
           IFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDV+GAIK+WKEMKANGC+P
Sbjct: 144 IFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVDGAIKLWKEMKANGCHP 203

Query: 197 TVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIF 256
           TVVSYTAYIKILLD GQI EAT  YK++LQSGLSP+CCTYTILMEYLIGEGKCKEALDIF
Sbjct: 204 TVVSYTAYIKILLDNGQINEATATYKKMLQSGLSPNCCTYTILMEYLIGEGKCKEALDIF 263

Query: 257 HKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSC 316
            KMQDAGVYPDKAACNILIQKCCKSGERLVMTQILE+MKE   VLRYPVF+EAHETLKSC
Sbjct: 264 SKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEFMKENRFVLRYPVFVEAHETLKSC 323

Query: 317 SFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLI 376
           S S  LL+QVNPH+EIES+SKGEVVDVST SN VP +VD EL+A+LLK+NKLTA+D+MLI
Sbjct: 324 SVSYALLKQVNPHMEIESISKGEVVDVSTGSNTVPPNVDNELLAMLLKDNKLTAVDHMLI 383

Query: 377 GTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSS 436
           G VDKNI+LDSSII SIIEVNCK NRPN ALLAF+Y  KN VNI+R LYL LIGILIRSS
Sbjct: 384 GIVDKNIQLDSSIIYSIIEVNCKSNRPNSALLAFDYCLKNSVNIKRKLYLDLIGILIRSS 443

Query: 437 IYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEELKCTATYTAL 496
           IYPKLLEIVQ+MY QGHCLGLY+ATLIL SLGKAGKPQYARKVFNMLPEELKCTATYTAL
Sbjct: 444 IYPKLLEIVQEMYTQGHCLGLYHATLILCSLGKAGKPQYARKVFNMLPEELKCTATYTAL 503

Query: 497 VDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVELDIYRREKKSFEI 556
           VD YFSAGSSGKGLKI+ETMRKKGFTPSLGTYNVLL GL KNGR VEL+IYRREKKSFEI
Sbjct: 504 VDGYFSAGSSGKGLKIFETMRKKGFTPSLGTYNVLLNGLAKNGRGVELNIYRREKKSFEI 563

Query: 557 SHHSHPNTVLEEERICDLLFGELVS 582
           SHHS  NT+L++ERICDLLFGELVS
Sbjct: 564 SHHSRLNTILDDERICDLLFGELVS 588

BLAST of Cla020137 vs. NCBI nr
Match: gi|659116058|ref|XP_008457878.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Cucumis melo])

HSP 1 Score: 988.0 bits (2553), Expect = 6.9e-285
Identity = 486/565 (86.02%), Postives = 523/565 (92.57%), Query Frame = 1

Query: 17  IYQNISSKALHSFHQYKQEKPTTRFSRKSRKGTKVVKKEEVDPRLYTRDTVRNICNILRN 76
           IYQNIS K LHS HQYK+EKP +RFSR SRKGTKVVKKEEV PR+YTRDTV NICNILRN
Sbjct: 24  IYQNISCKCLHSLHQYKREKPISRFSRNSRKGTKVVKKEEVIPRVYTRDTVCNICNILRN 83

Query: 77  CSWGSAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLD 136
           CSW SAQ HLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRL++FKHDQYTYTTMLD
Sbjct: 84  CSWASAQKHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLKVFKHDQYTYTTMLD 143

Query: 137 IFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYP 196
           IFGEAGRISSMNY+FQQMKEKGIKIDA TYTSLMHWRSNSGDV+GAIKVWKEMKANGC+P
Sbjct: 144 IFGEAGRISSMNYLFQQMKEKGIKIDAATYTSLMHWRSNSGDVDGAIKVWKEMKANGCHP 203

Query: 197 TVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIF 256
           TVVSYTAYIKILLD GQ KEAT  YKE+L++GLSP+CCTYTILMEYLIGEGKCKEALDIF
Sbjct: 204 TVVSYTAYIKILLDNGQSKEATATYKEMLKTGLSPNCCTYTILMEYLIGEGKCKEALDIF 263

Query: 257 HKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSC 316
            KMQDAGVYPDKAACNILIQKCCKSGERLVMTQILE+MKE   VLRYPVF+EAHE LKSC
Sbjct: 264 SKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEFMKENRFVLRYPVFVEAHENLKSC 323

Query: 317 SFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLI 376
           S    LLRQVNPHIEIES+SKGEV+DVST SN VP +VD EL+A+LLK+NKLTAID+MLI
Sbjct: 324 SVGHALLRQVNPHIEIESISKGEVLDVSTGSNTVPPNVDNELLAMLLKDNKLTAIDHMLI 383

Query: 377 GTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSS 436
           G VDKNI+LDSSII SIIEVNCK NRPN A+LAF+Y  KNGVNI R LYL LIGILIRSS
Sbjct: 384 GIVDKNIQLDSSIIYSIIEVNCKSNRPNSAMLAFDYCLKNGVNIGRKLYLDLIGILIRSS 443

Query: 437 IYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEELKCTATYTAL 496
           IYPKLLEIVQ+MY QGHC+GLY+ATLIL+SLG+AGKPQYARKVFN+LPEELKCTATYT+L
Sbjct: 444 IYPKLLEIVQEMYTQGHCIGLYHATLILYSLGRAGKPQYARKVFNILPEELKCTATYTSL 503

Query: 497 VDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVELDIYRREKKSFEI 556
           VDAYFSAGSSGKGLKI+ETMRKKGFTPSLGTYNVLL GL K+GR VEL+IYRREKKSFEI
Sbjct: 504 VDAYFSAGSSGKGLKIFETMRKKGFTPSLGTYNVLLNGLAKSGRGVELNIYRREKKSFEI 563

Query: 557 SHHSHPNTVLEEERICDLLFGELVS 582
           SHHS  NT+L++ERICDLLFGELVS
Sbjct: 564 SHHSRLNTILDDERICDLLFGELVS 588

BLAST of Cla020137 vs. NCBI nr
Match: gi|1009158915|ref|XP_015897536.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Ziziphus jujuba])

HSP 1 Score: 662.1 bits (1707), Expect = 8.7e-187
Identity = 330/566 (58.30%), Postives = 430/566 (75.97%), Query Frame = 1

Query: 12  SFVDGIYQNISSKALHSFHQYKQEKPTTRF-SRKSRKGTKVVKKEEVDPRLYTRDTVRNI 71
           +F + + +N S K +HSF  +KQ K    F  RKSRK  K + KE VDP++Y RDT+  I
Sbjct: 23  TFSNSLVKN-SIKFVHSFDHFKQNKSIKPFLGRKSRKYPKTIAKEAVDPKVYMRDTIGKI 82

Query: 72  CNILRNCSWGSAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYT 131
             ILR  +W SAQ  L+ LP+RWDSY +NQ+LKTHPP+EK WLFFNWA RL+ FKHDQ+T
Sbjct: 83  YKILRYSTWDSAQDQLQGLPVRWDSYTVNQILKTHPPMEKAWLFFNWADRLKGFKHDQFT 142

Query: 132 YTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMK 191
           YTTM+DIFGEAGRISSMN+VF+QM+E+ I+IDAVTYTSLMHW  +SGDV+GA++VW++MK
Sbjct: 143 YTTMIDIFGEAGRISSMNFVFKQMQEREIEIDAVTYTSLMHWIYSSGDVDGAMEVWEQMK 202

Query: 192 ANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCK 251
           ANGC PTVVSYTAY+KIL +  ++++A DAYKE+LQSG SP+C TYT+LMEYLIG GKCK
Sbjct: 203 ANGCKPTVVSYTAYMKILFNSNRVEKAIDAYKEMLQSGCSPNCHTYTVLMEYLIGSGKCK 262

Query: 252 EALDIFHKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAH 311
           EAL+IF KMQ+AGV PDKAACNILI+K C+SG    MTQIL+YMKE H+VLRYPVFLEA 
Sbjct: 263 EALEIFDKMQEAGVQPDKAACNILIKKLCESGATWAMTQILQYMKENHIVLRYPVFLEAC 322

Query: 312 ETLKSCSFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTA 371
           E LK    S +LLRQVNPH   E  S     D   +       +D  L+ ILL++  L A
Sbjct: 323 EILKVSGESDSLLRQVNPHFSNEPGSTDG--DFGKTPAAASFTLDEGLILILLRKENLAA 382

Query: 372 IDYMLIGTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIG 431
           ++ +L   ++KNI+L+S+II +II+VNC H R + ALLAF Y  K G+ IERN YL L+G
Sbjct: 383 VNCLLAEIINKNIKLNSAIISTIIKVNCDHCRLHDALLAFEYSVKIGLIIERNSYLALVG 442

Query: 432 ILIRSSIYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEELKCT 491
            L+R+  + K++++V++M   GH LG+Y AT++++ LG A +P +A ++FN+ P++ KCT
Sbjct: 443 ALVRAKSFTKVMDVVEEMIRAGHSLGIYAATILIYRLGCARRPIFAMRIFNLFPDDHKCT 502

Query: 492 ATYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVELDIYRRE 551
           ATYTAL+ AYFSAG+  KGLKI+ETM+ KG  PSLGTYNVLL+GL K+GRV E++I+R+E
Sbjct: 503 ATYTALIGAYFSAGAVDKGLKIFETMKGKGILPSLGTYNVLLSGLSKSGRVNEVEIFRKE 562

Query: 552 KKSFEISHHSHPNTVLEEERICDLLF 577
           KK  +I  H H + V  +++ICDLLF
Sbjct: 563 KKKLQIDGHPH-DIVPVDKKICDLLF 584

BLAST of Cla020137 vs. NCBI nr
Match: gi|645272910|ref|XP_008241621.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01390 [Prunus mume])

HSP 1 Score: 653.3 bits (1684), Expect = 4.0e-184
Identity = 332/581 (57.14%), Postives = 431/581 (74.18%), Query Frame = 1

Query: 8   LPYLSFVDGIYQN----ISSKALHSFHQYKQEKPTTRFSRKSRKG--TKVVKKEEVDPRL 67
           L +L+   GI+ +     S K++HS ++ KQ +P+   +RKS K       K+E+ DP++
Sbjct: 11  LKHLAAFTGIHDHQCPKSSIKSIHSLNRIKQNEPSKPITRKSTKKHFKSSKKQEDADPKI 70

Query: 68  YTRDTVRNICNILRNCSWGSAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRL 127
           Y R+T+ NI  IL+  +W SAQ  L+ LPIRWDSY ++QVLKTHPP+EK WLFFNW + +
Sbjct: 71  YMRETIGNIYKILKYSTWDSAQDQLQRLPIRWDSYTVSQVLKTHPPMEKAWLFFNWVAGI 130

Query: 128 QIFKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEG 187
           + FKHD +TYTTMLDIFGEAGR+SSM +VF+QM+EK I+IDAVTYTSLMHW S++GDV+G
Sbjct: 131 RGFKHDHFTYTTMLDIFGEAGRVSSMTHVFKQMQEKDIRIDAVTYTSLMHWLSSAGDVDG 190

Query: 188 AIKVWKEMKANGCYPTVVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILME 247
           A+KVW+EM+A GC PTVVSYTAY+K+L +  ++KEATD YKE+LQSG SP+C TYT+LME
Sbjct: 191 AVKVWEEMRAQGCVPTVVSYTAYMKVLFNDNRVKEATDVYKEMLQSGCSPTCHTYTVLME 250

Query: 248 YLIGEGKCKEALDIFHKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVL 307
           YLIG GKCKEAL+IF KMQDAGV PDKAACNILI+  CK GE   M Q+L +MKE  L L
Sbjct: 251 YLIGSGKCKEALEIFGKMQDAGVQPDKAACNILIENLCKVGETWTMNQVLWFMKEHRLAL 310

Query: 308 RYPVFLEAHETLKSCSFSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAI 367
           RYPVFLEA  T K    S +LLRQV+PH  IES ++ E  ++  ++   PS +D  LV I
Sbjct: 311 RYPVFLEAIRTFKIAGVSDSLLRQVHPHFSIESGNQ-ETGELKATAADAPSTMDEWLVMI 370

Query: 368 LLKENKLTAIDYMLIGTVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIE 427
           LLK+  L AID++L G  DKNI+L+S+II +IIEVNC   RP+GALLAF Y  K G+ +E
Sbjct: 371 LLKKENLVAIDHLLAGNEDKNIKLNSAIISTIIEVNCGLGRPDGALLAFEYSVKMGIIVE 430

Query: 428 RNLYLCLIGILIRSSIYPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFN 487
           RN YL LIG LIRS+ +PK++EIV +M   G+  G Y + L+++ LG+A +   A KVFN
Sbjct: 431 RNAYLSLIGALIRSNSFPKVVEIVVEMIRAGYSPGTYLSALLIYRLGRARRTNCAAKVFN 490

Query: 488 MLPEELKCTATYTALVDAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRV 547
           +LP++ KCT TYTAL+  YFSAGS+ +GLKI++ MR +GF P LGTYNVLL GL K GRV
Sbjct: 491 LLPDDHKCTTTYTALMGVYFSAGSADRGLKIFDMMRGEGFLPFLGTYNVLLAGLQKLGRV 550

Query: 548 VELDIYRREKKSFEISHHSHPNTVLEEERICDLLF-GELVS 582
            E ++YR+EKKS +    S  N V  +++ICD LF G++VS
Sbjct: 551 RESEMYRKEKKSLQSDGQSQ-NAVPIDQKICDFLFAGDVVS 589

BLAST of Cla020137 vs. NCBI nr
Match: gi|731387288|ref|XP_010649197.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g01390 isoform X1 [Vitis vinifera])

HSP 1 Score: 650.6 bits (1677), Expect = 2.6e-183
Identity = 334/565 (59.12%), Postives = 413/565 (73.10%), Query Frame = 1

Query: 18  YQNISSKALHSFHQYKQEKPTTRFSRKSRKGTKVVKKEEVDPRLYTRDTVRNICNILRNC 77
           Y   S +ALHS HQ++Q+KP  R S+K RK T+   KE VD ++Y RDT+ NI  ILR  
Sbjct: 28  YWKSSIRALHSLHQFRQKKPVQRTSQKFRKPTE---KENVDHKIYMRDTIGNISKILRYL 87

Query: 78  SWGSAQGHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASRLQIFKHDQYTYTTMLDI 137
           +W SAQ  LE L IRWDSY +NQVLK+HPP+EK WLFFNWASRL+ FKHDQ+TYTTMLDI
Sbjct: 88  TWDSAQEQLEKLSIRWDSYTVNQVLKSHPPMEKAWLFFNWASRLKGFKHDQFTYTTMLDI 147

Query: 138 FGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVEGAIKVWKEMKANGCYPT 197
           FGEA RI SMNYVFQQM+EKGIK DAVTYTSLMHW SN GD+E A++VWKEMKA GC  T
Sbjct: 148 FGEARRIESMNYVFQQMQEKGIKTDAVTYTSLMHWFSNDGDIERAVRVWKEMKAKGCCLT 207

Query: 198 VVSYTAYIKILLDIGQIKEATDAYKELLQSGLSPSCCTYTILMEYLIGEGKCKEALDIFH 257
           VVSYTAY+KIL D  ++KEA D YKE+LQSG +P+C TYT+LME+L G GK K AL+IF 
Sbjct: 208 VVSYTAYMKILFDNKRVKEAADVYKEMLQSGCAPNCYTYTVLMEHLTGSGKYKAALEIFS 267

Query: 258 KMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEYMKEKHLVLRYPVFLEAHETLKSCS 317
           +MQ+AGV PDKA CNILI+K CK+G+   +TQIL YMK+  LVLRYPV+LEA +TLK   
Sbjct: 268 RMQEAGVQPDKATCNILIEKFCKTGQTWAITQILLYMKDNFLVLRYPVYLEALQTLKVAG 327

Query: 318 FSCNLLRQVNPHIEIESVSKGEVVDVSTSSNVVPSDVDYELVAILLKENKLTAIDYMLIG 377
            S  LLRQVNPH+ +   SK E+V+   +   V S +D   V + L +    AID +L G
Sbjct: 328 ESDILLRQVNPHLNVGLSSKEEIVEFKETVADVHSTIDRGFVLLFLTKQNFYAIDCLLTG 387

Query: 378 TVDKNIRLDSSIILSIIEVNCKHNRPNGALLAFNYGFKNGVNIERNLYLCLIGILIRSSI 437
            + KN RLDS II  IIEVNC H R NGALLAF Y  K G+NIER  YL L+G+ IR++ 
Sbjct: 388 MIHKNTRLDSVIISQIIEVNCAHCRINGALLAFEYSVKMGINIERIAYLALMGVFIRANS 447

Query: 438 YPKLLEIVQKMYMQGHCLGLYYATLILHSLGKAGKPQYARKVFNMLPEELKCTATYTALV 497
           +PK+ +IV+KM   G  LG+Y   L+++ LG A +P  A KVF +LP++ K TA YTAL+
Sbjct: 448 FPKVADIVEKMVRAGISLGMYLGALLIYRLGCARRPGSAAKVFGLLPDDQKGTAAYTALI 507

Query: 498 DAYFSAGSSGKGLKIYETMRKKGFTPSLGTYNVLLTGLVKNGRVVELDIYRREKKSFEIS 557
            AYFS+G+  KGLKIY+TM++K   P+LGTYN+LL GL K GR  E +IYR+EKK+    
Sbjct: 508 SAYFSSGNVDKGLKIYKTMQRKRIHPALGTYNLLLAGLEKKGRAREAEIYRKEKKTLHTH 567

Query: 558 HHSHPNTVLEEERICDLLF-GELVS 582
            HS  + V  +E+IC+LLF G LVS
Sbjct: 568 GHSQ-DIVSMDEKICNLLFSGNLVS 588

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP139_ARATH2.5e-15751.52Pentatricopeptide repeat-containing protein At2g01390 OS=Arabidopsis thaliana GN... [more]
PP123_ARATH3.1e-2732.77Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN... [more]
PPR49_ARATH1.3e-2532.87Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN... [more]
PP138_ARATH6.5e-2536.90Pentatricopeptide repeat-containing protein At2g01360 OS=Arabidopsis thaliana GN... [more]
PP344_ARATH4.2e-2426.59Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LJM3_CUCSA2.1e-28887.26Uncharacterized protein OS=Cucumis sativus GN=Csa_2G295410 PE=4 SV=1[more]
A0A0D2QLU1_GOSRA7.9e-17956.32Uncharacterized protein OS=Gossypium raimondii GN=B456_007G051500 PE=4 SV=1[more]
A0A061DFX4_THECC6.7e-17856.24Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0004... [more]
F6GWZ7_VITVI4.3e-17759.41Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01160 PE=4 SV=... [more]
A0A0B0PHY7_GOSAR7.4e-17757.90Uncharacterized protein OS=Gossypium arboreum GN=F383_31667 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778670108|ref|XP_011649371.1|3.0e-28887.26PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Cucumis s... [more]
gi|659116058|ref|XP_008457878.1|6.9e-28586.02PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Cucumis m... [more]
gi|1009158915|ref|XP_015897536.1|8.7e-18758.30PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Ziziphus ... [more]
gi|645272910|ref|XP_008241621.1|4.0e-18457.14PREDICTED: pentatricopeptide repeat-containing protein At2g01390 [Prunus mume][more]
gi|731387288|ref|XP_010649197.1|2.6e-18359.12PREDICTED: pentatricopeptide repeat-containing protein At2g01390 isoform X1 [Vit... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006629 lipid metabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla020137Cla020137.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 234..280
score: 7.0E-11coord: 489..537
score: 5.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 150..207
score: 2.2
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 492..524
score: 1.6E-6coord: 234..267
score: 4.2E-7coord: 164..198
score: 8.5E-9coord: 129..163
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 162..196
score: 11.783coord: 127..161
score: 10.896coord: 386..420
score: 5.174coord: 489..523
score: 10.863coord: 524..558
score: 6.423coord: 267..301
score: 8.232coord: 197..231
score: 9.514coord: 421..455
score: 5.119coord: 456..486
score: 5.733coord: 232..266
score: 10
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 385..550
score: 1.5E-197coord: 14..287
score: 1.5E
NoneNo IPR availablePANTHERPTHR24015:SF600SUBFAMILY NOT NAMEDcoord: 385..550
score: 1.5E-197coord: 14..287
score: 1.5E