Cla018788 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla018788
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	BNR/Asp-box repeat protein (AHRD V1 **-- D4VL61_9BACE); contains Interpro domain(s) IPR011040 Neuraminidase
Location	Chr6 : 22116590 .. 22119239 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAAGGGAGTTATGTTGAAGGGCCCTTGCTAGAGGAGTTTACATTTCCTGCCAATTCCGTTCCTTTCAACAACTGTCATGCTTCTACGATTGTGGAGGTTTGGTTTGATGGACAAACTTCATTTGGTCTTATAATAATGGGGTCCCTGATTTTGTTAGGGGAGAATCTGAGCGTTTTCTTTCTGGATGGAGCAGGTTGATAAAGATCATTACTTGGTTGCATATTTTGGGGGTACATTTGAGGGCGCACCGGATGTGAAGATTTGGTTGCAGACATATAAGGTAAACAAGCCAATCCGATTTTATCACTCCCCAATGCCATTTAATTGGTAAACAAGCATAATTTCTCAAAAACAGAAAACCAAAAACAAAATGGTTATGGAAGAGGGCCTAATTACTTATACATTGTTCTTACCTGAGTTATGTTCTCCGTGCTTGCTTATATGCTTTCTCAAATTATACTGCTATAAAATTCACTCCCCCTCCTTGCCTTTGTTTATGTCAAAACAGGCAGCTGGCCTTTTTATCCATATTATATTTATATTACTTTTAACTTTCCTCATTCATGTTCATTTTTTGCTAGGTTGTCCACTCATAGTTTTATGCTCACGAATTCATTAGAAAGGGGTGTTGACAATTTTACTCGAGTTATGTAGAAAGTTGGACAAGCAATAACTCTTTTTATCTCGCCATGCCCATGTTGAGTCCCTTATTTCTTTTAACGATTTCTTGTTAAAATTATTGGTAAATTTACTTGCAGAACGGCTCCTGGCACTCGCCAATTGTGGCTGATGAGGAGCCTGATGTTCCAATGTGGAACCCTGTCTTGTTCAAACTTCCATCAGATGAGCTGCTTCTGTTTTATAGAGTGGGCCAAGACGTTCAAAGGTATATCTTTTTTAAGCTCATAATAATTTTCTGAAATAACAGCTTTAGACTAGTTAATTAGTTTCTTTTATATTGGATCATACACCTCCCATGGTGGCAATGGCACTGTCTTTTCAGCCAGCAATTGTGAGACGTGATTTGGAATCCATGTCATTTGAAAACATTATTTATCATATCAAAGAGTTCAGTATCAGGGCCAACAAGCCCATGTTAACAGAATGCTTAATCATCAACAGGCTAACAAGCGTTACCAAGGCTATATATAAGATGTCTTATAAATAAAATGATCATAGGAAGTTGATATGCTTAAGTTAGTTGGTTTCATAAATTAAGCTTTCTAAAAAGAGCCTTAATACCTTTTCCTTGAAATCACAGGGACCCTTTTTTTGACTGGTTCACTCCAGTCTTCAATGACCAACTATCTAACATATTGAATAACTTTTTAAGTGAAAAGTTAAACCCTTCTGCTTCCAAGTTTGTTTGATTCTATCTTATGCTGGTGGAGATAACAATCAGATGGAGTGGATGCATGAAGCGGTCATATGACAAAGGCGGTACTTGGACAGCAAGAGAACAGCTTCCTCCTGGTATTTTAGGACCAATAAAGAATAAGGTATAATATATGTGCTGATATCTACCATTCATTTAAACTGTTTTTGCTCAAGCAGCTGTCTTTCTTTGTCTGATGCTGTAGCCAATCTTGCTGGAAAATGGGGTTTTGCTCTGTGGATCTTCGGTTGAAAGTTGGAACTCTTGGGGTGCATGGATGGAGGTTATTATGAATAGTTCTTTAGTTTTGACTTGTCCTAAAATCTGGTGAATGTGGCTGACATGTCAATATAATAGGTCACATCTGATTCAGGTAGAACATGGAGAAAGTTTGGCCCAATATACATGGAAAATCGATCTCTCAGTGTCATTCAACCAGTTCCATACCAGACTGCAAACGGAAACCTGCGTGTTTTACTTCGATCCTTCACAGGTATCAATAGTATTTGTATGTCAGAATCCACTGATGGTGGTCACAACTGGAGCTATGCAAAACCTACAAATCTTCCTAATCCAAACTCAGGTAACATGGCTGAACTACATGCATTACCTGTTTGCAAGCATCTGCATACTATTAGGTAAGCAATTAGGAATATTTAGGGTATATTAGTAACTAGATAGGGAGGTGGTTATGGATTTTAGTTATAAATAGAGGAAGTTAGGCATTTGGTGCATGAAGTACCTCGAATTATTTGTTTCTATCGTAATCTCTTCTTCATATTCCAATATATTAGTTTCATATGTTTTCTGTGATTGGATACTTGACACATACATGAATGTCTAAGGGCAATGATCATTCTTGTGAGCATCTTCATTATGAAATAGAACTACTTCCCAGATTTCTCAATTTCTGATTTTATAAGATTTTCATTCATTCTGTCACAAGCTCTTCTCTAAAAAAAAAAATCATTCTGTCACAAGCGGAGATGACCGATATTACTACAACATCTCATCTTTGAATATGTAATCTCATTGATAGGTATTGATGGAGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACGGTATCGAGAGGCGTGCTTAAGGTTGGCCTGTCTCTGGATGATGGTGACTCATGGCTAGATGTCATGACCTTGGAGGATGAGCCAGGAAAGGAATTCTCATATCCAGCCGTCATTGAGGCTAGTGATGGCTCAGTTCACATCACATACACATACAATAGGCAGCAGATTAAGGTATGA

mRNA sequence

ATGGGAAAAGGGAGTTATGTTGAAGGGCCCTTGCTAGAGGAGTTTACATTTCCTGCCAATTCCGTTCCTTTCAACAACTGTCATGCTTCTACGATTGTGGAGGTTGATAAAGATCATTACTTGGTTGCATATTTTGGGGGTACATTTGAGGGCGCACCGGATGTGAAGATTTGGTTGCAGACATATAAGAACGGCTCCTGGCACTCGCCAATTGTGGCTGATGAGGAGCCTGATGTTCCAATGTGGAACCCTGTCTTGTTCAAACTTCCATCAGATGAGCTGCTTCTGTTTTATAGAGTGGGCCAAGACGTTCAAAGATGGAGTGGATGCATGAAGCGGTCATATGACAAAGGCGGTACTTGGACAGCAAGAGAACAGCTTCCTCCTGGTATTTTAGGACCAATAAAGAATAAGCCAATCTTGCTGGAAAATGGGGTTTTGCTCTGTGGATCTTCGGTTGAAAGTTGGAACTCTTGGGGTGCATGGATGGAGGTCACATCTGATTCAGGTAGAACATGGAGAAAGTTTGGCCCAATATACATGGAAAATCGATCTCTCAGTGTCATTCAACCAGTTCCATACCAGACTGCAAACGGAAACCTGCGTGTTTTACTTCGATCCTTCACAGGTATCAATAGTATTTGTATGTCAGAATCCACTGATGGTGGTCACAACTGGAGCTATGCAAAACCTACAAATCTTCCTAATCCAAACTCAGGTATTGATGGAGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACGGTATCGAGAGGCGTGCTTAAGGTTGGCCTGTCTCTGGATGATGGTGACTCATGGCTAGATGTCATGACCTTGGAGGATGAGCCAGGAAAGGAATTCTCATATCCAGCCGTCATTGAGGCTAGTGATGGCTCAGTTCACATCACATACACATACAATAGGCAGCAGATTAAGGTATGA

Coding sequence (CDS)

ATGGGAAAAGGGAGTTATGTTGAAGGGCCCTTGCTAGAGGAGTTTACATTTCCTGCCAATTCCGTTCCTTTCAACAACTGTCATGCTTCTACGATTGTGGAGGTTGATAAAGATCATTACTTGGTTGCATATTTTGGGGGTACATTTGAGGGCGCACCGGATGTGAAGATTTGGTTGCAGACATATAAGAACGGCTCCTGGCACTCGCCAATTGTGGCTGATGAGGAGCCTGATGTTCCAATGTGGAACCCTGTCTTGTTCAAACTTCCATCAGATGAGCTGCTTCTGTTTTATAGAGTGGGCCAAGACGTTCAAAGATGGAGTGGATGCATGAAGCGGTCATATGACAAAGGCGGTACTTGGACAGCAAGAGAACAGCTTCCTCCTGGTATTTTAGGACCAATAAAGAATAAGCCAATCTTGCTGGAAAATGGGGTTTTGCTCTGTGGATCTTCGGTTGAAAGTTGGAACTCTTGGGGTGCATGGATGGAGGTCACATCTGATTCAGGTAGAACATGGAGAAAGTTTGGCCCAATATACATGGAAAATCGATCTCTCAGTGTCATTCAACCAGTTCCATACCAGACTGCAAACGGAAACCTGCGTGTTTTACTTCGATCCTTCACAGGTATCAATAGTATTTGTATGTCAGAATCCACTGATGGTGGTCACAACTGGAGCTATGCAAAACCTACAAATCTTCCTAATCCAAACTCAGGTATTGATGGAGTCAAACTGAGGGATGGTCGTTTATTACTTGTTTATAACACGGTATCGAGAGGCGTGCTTAAGGTTGGCCTGTCTCTGGATGATGGTGACTCATGGCTAGATGTCATGACCTTGGAGGATGAGCCAGGAAAGGAATTCTCATATCCAGCCGTCATTGAGGCTAGTGATGGCTCAGTTCACATCACATACACATACAATAGGCAGCAGATTAAGGTATGA

Protein sequence

MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQTYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGTWTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIYMENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDGSVHITYTYNRQQIKV

Homology

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BLAST of Cla018788 vs. TrEMBL
Match: A0A0A0LWB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G295130 PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 7.1e-174
Identity = 291/314 (92.68%), Postives = 303/314 (96.50%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           MGKGSYV+GPL EEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGT EGAPDVKIWLQ
Sbjct: 1   MGKGSYVDGPLQEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTLEGAPDVKIWLQ 60

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
            +KNGSWHSPIVADEEPD+PMWNPVLFKLPSDELLLFY+VGQ+VQ+WSGCMKRSYDKG T
Sbjct: 61  AFKNGSWHSPIVADEEPDIPMWNPVLFKLPSDELLLFYKVGQEVQKWSGCMKRSYDKGIT 120

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGR+WRKFGPIY
Sbjct: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRSWRKFGPIY 180

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           M+NRSLSVIQPVPYQTANGNLRVLLRSFTGI+SICMSES DGGHNWS+A PTNLPNPNSG
Sbjct: 181 MKNRSLSVIQPVPYQTANGNLRVLLRSFTGIDSICMSESNDGGHNWSFAIPTNLPNPNSG 240

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSW DVMTLEDEP  EFSYPAVIEASD 
Sbjct: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWQDVMTLEDEPENEFSYPAVIEASDD 300

Query: 301 SVHITYTYNRQQIK 315
           S+HITYTY R+QIK
Sbjct: 301 SIHITYTYRRKQIK 314

[Close]

BLAST of Cla018788 vs. TrEMBL
Match: I1MSV5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G067600 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 4.9e-151
Identity = 250/315 (79.37%), Postives = 277/315 (87.94%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           M     +EGPL+EEFT+ A S PF +CHASTIVEVDKDH+LVAYFGGTFEGAPDVKIW+Q
Sbjct: 34  MASNCSIEGPLVEEFTYQAGSAPFKSCHASTIVEVDKDHFLVAYFGGTFEGAPDVKIWVQ 93

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
           TYKNG W +P++ADEEP+VPMWNP LFKLPSDELLLFY++GQ+VQ+WSG MKRSYDKG T
Sbjct: 94  TYKNGRWQAPVIADEEPNVPMWNPALFKLPSDELLLFYKIGQEVQKWSGFMKRSYDKGKT 153

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WT REQLPPGILGPIKNKPILLENG LLCGSSVESWNSWGAW+EVT+D GR+W K+GPIY
Sbjct: 154 WTGREQLPPGILGPIKNKPILLENGNLLCGSSVESWNSWGAWVEVTTDFGRSWSKYGPIY 213

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           +EN+ LSVIQPVPYQTA+G LRVLLRSF GI  +CMSES+DGG  W YAKPT LPNPNSG
Sbjct: 214 IENKPLSVIQPVPYQTADGKLRVLLRSFDGIGRVCMSESSDGGKTWGYAKPTQLPNPNSG 273

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLL YNTVSR VLKV LS DDGDSW +V+TLED  G EFSYPAVI+ SDG
Sbjct: 274 IDGVKLRDGRLLLAYNTVSRSVLKVALSKDDGDSWCEVLTLEDTSGMEFSYPAVIQDSDG 333

Query: 301 SVHITYTYNRQQIKV 316
            +HITYTYNR QIKV
Sbjct: 334 RIHITYTYNRTQIKV 348

[Close]

BLAST of Cla018788 vs. TrEMBL
Match: A0A0R0F8V6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G067600 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.4e-150
Identity = 249/314 (79.30%), Postives = 276/314 (87.90%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           M     +EGPL+EEFT+ A S PF +CHASTIVEVDKDH+LVAYFGGTFEGAPDVKIW+Q
Sbjct: 24  MASNCSIEGPLVEEFTYQAGSAPFKSCHASTIVEVDKDHFLVAYFGGTFEGAPDVKIWVQ 83

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
           TYKNG W +P++ADEEP+VPMWNP LFKLPSDELLLFY++GQ+VQ+WSG MKRSYDKG T
Sbjct: 84  TYKNGRWQAPVIADEEPNVPMWNPALFKLPSDELLLFYKIGQEVQKWSGFMKRSYDKGKT 143

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WT REQLPPGILGPIKNKPILLENG LLCGSSVESWNSWGAW+EVT+D GR+W K+GPIY
Sbjct: 144 WTGREQLPPGILGPIKNKPILLENGNLLCGSSVESWNSWGAWVEVTTDFGRSWSKYGPIY 203

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           +EN+ LSVIQPVPYQTA+G LRVLLRSF GI  +CMSES+DGG  W YAKPT LPNPNSG
Sbjct: 204 IENKPLSVIQPVPYQTADGKLRVLLRSFDGIGRVCMSESSDGGKTWGYAKPTQLPNPNSG 263

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLL YNTVSR VLKV LS DDGDSW +V+TLED  G EFSYPAVI+ SDG
Sbjct: 264 IDGVKLRDGRLLLAYNTVSRSVLKVALSKDDGDSWCEVLTLEDTSGMEFSYPAVIQDSDG 323

Query: 301 SVHITYTYNRQQIK 315
            +HITYTYNR QIK
Sbjct: 324 RIHITYTYNRTQIK 337

[Close]

BLAST of Cla018788 vs. TrEMBL
Match: I1MSV3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G067600 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.4e-150
Identity = 249/314 (79.30%), Postives = 276/314 (87.90%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           M     +EGPL+EEFT+ A S PF +CHASTIVEVDKDH+LVAYFGGTFEGAPDVKIW+Q
Sbjct: 34  MASNCSIEGPLVEEFTYQAGSAPFKSCHASTIVEVDKDHFLVAYFGGTFEGAPDVKIWVQ 93

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
           TYKNG W +P++ADEEP+VPMWNP LFKLPSDELLLFY++GQ+VQ+WSG MKRSYDKG T
Sbjct: 94  TYKNGRWQAPVIADEEPNVPMWNPALFKLPSDELLLFYKIGQEVQKWSGFMKRSYDKGKT 153

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WT REQLPPGILGPIKNKPILLENG LLCGSSVESWNSWGAW+EVT+D GR+W K+GPIY
Sbjct: 154 WTGREQLPPGILGPIKNKPILLENGNLLCGSSVESWNSWGAWVEVTTDFGRSWSKYGPIY 213

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           +EN+ LSVIQPVPYQTA+G LRVLLRSF GI  +CMSES+DGG  W YAKPT LPNPNSG
Sbjct: 214 IENKPLSVIQPVPYQTADGKLRVLLRSFDGIGRVCMSESSDGGKTWGYAKPTQLPNPNSG 273

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLL YNTVSR VLKV LS DDGDSW +V+TLED  G EFSYPAVI+ SDG
Sbjct: 274 IDGVKLRDGRLLLAYNTVSRSVLKVALSKDDGDSWCEVLTLEDTSGMEFSYPAVIQDSDG 333

Query: 301 SVHITYTYNRQQIK 315
            +HITYTYNR QIK
Sbjct: 334 RIHITYTYNRTQIK 347

[Close]

BLAST of Cla018788 vs. TrEMBL
Match: A0A0B2Q8F7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_005752 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.4e-150
Identity = 250/315 (79.37%), Postives = 276/315 (87.62%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           M     +EGPL+EEFT+ A S PF +CHASTIVEVDKDH+LVAYFGGTFEGAPDVKIW+Q
Sbjct: 24  MASNCSIEGPLVEEFTYQAGSAPFKSCHASTIVEVDKDHFLVAYFGGTFEGAPDVKIWVQ 83

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
           TYKNG W +P++ADEEP+VPMWNP LFKLPSDELLLFY++GQ+VQ+WSG MKRSYDKG T
Sbjct: 84  TYKNGRWQAPVIADEEPNVPMWNPALFKLPSDELLLFYKIGQEVQKWSGFMKRSYDKGKT 143

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WT REQLPPGILGPIKNKPILLENG LLCGSSVESWNSWGAW+EVT+D GR+W K GPIY
Sbjct: 144 WTGREQLPPGILGPIKNKPILLENGNLLCGSSVESWNSWGAWVEVTTDFGRSWSKHGPIY 203

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           +EN+ LSVIQPVPYQTA+G LRVLLRSF GI  +CMSES+DGG  W YAKPT LPNPNSG
Sbjct: 204 IENKPLSVIQPVPYQTADGKLRVLLRSFDGIGRVCMSESSDGGKTWGYAKPTQLPNPNSG 263

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLL YNTVSR VLKV LS DDGDSW +V+TLED  G EFSYPAVI+ SDG
Sbjct: 264 IDGVKLRDGRLLLAYNTVSRSVLKVALSKDDGDSWCEVLTLEDTSGMEFSYPAVIQDSDG 323

Query: 301 SVHITYTYNRQQIKV 316
            +HITYTYNR QIKV
Sbjct: 324 RIHITYTYNRTQIKV 338

[Close]

BLAST of Cla018788 vs. NCBI nr
Match: gi|659107416|ref|XP_008453663.1| (PREDICTED: uncharacterized protein LOC103494313 isoform X1 [Cucumis melo])

HSP 1 Score: 627.5 bits (1617), Expect = 1.3e-176
Identity = 296/314 (94.27%), Postives = 305/314 (97.13%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGT EGAPDVKIWLQ
Sbjct: 93  MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTLEGAPDVKIWLQ 152

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
            +KNGSWHSPIVADEEPD+PMWNPVLFKLPSDELLLFY+VGQDVQ+WSGCMKRSYDKG T
Sbjct: 153 AFKNGSWHSPIVADEEPDIPMWNPVLFKLPSDELLLFYKVGQDVQKWSGCMKRSYDKGIT 212

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGR+WRKFGPIY
Sbjct: 213 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRSWRKFGPIY 272

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           M+NRSLSVIQPVPYQTANGNLRVLLRSFTGI SICMSESTDGGHNWS+A PTNLPNPNSG
Sbjct: 273 MKNRSLSVIQPVPYQTANGNLRVLLRSFTGIGSICMSESTDGGHNWSFAVPTNLPNPNSG 332

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSW DVMTLEDEP  EFSYPAVIEASDG
Sbjct: 333 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWQDVMTLEDEPENEFSYPAVIEASDG 392

Query: 301 SVHITYTYNRQQIK 315
           S+HITYTY R+QIK
Sbjct: 393 SIHITYTYKRKQIK 406

[Close]

BLAST of Cla018788 vs. NCBI nr
Match: gi|659107418|ref|XP_008453664.1| (PREDICTED: uncharacterized protein LOC103494313 isoform X2 [Cucumis melo])

HSP 1 Score: 627.5 bits (1617), Expect = 1.3e-176
Identity = 296/314 (94.27%), Postives = 305/314 (97.13%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGT EGAPDVKIWLQ
Sbjct: 55  MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTLEGAPDVKIWLQ 114

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
            +KNGSWHSPIVADEEPD+PMWNPVLFKLPSDELLLFY+VGQDVQ+WSGCMKRSYDKG T
Sbjct: 115 AFKNGSWHSPIVADEEPDIPMWNPVLFKLPSDELLLFYKVGQDVQKWSGCMKRSYDKGIT 174

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGR+WRKFGPIY
Sbjct: 175 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRSWRKFGPIY 234

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           M+NRSLSVIQPVPYQTANGNLRVLLRSFTGI SICMSESTDGGHNWS+A PTNLPNPNSG
Sbjct: 235 MKNRSLSVIQPVPYQTANGNLRVLLRSFTGIGSICMSESTDGGHNWSFAVPTNLPNPNSG 294

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSW DVMTLEDEP  EFSYPAVIEASDG
Sbjct: 295 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWQDVMTLEDEPENEFSYPAVIEASDG 354

Query: 301 SVHITYTYNRQQIK 315
           S+HITYTY R+QIK
Sbjct: 355 SIHITYTYKRKQIK 368

[Close]

BLAST of Cla018788 vs. NCBI nr
Match: gi|449464334|ref|XP_004149884.1| (PREDICTED: uncharacterized protein LOC101219119 isoform X1 [Cucumis sativus])

HSP 1 Score: 617.8 bits (1592), Expect = 1.0e-173
Identity = 291/314 (92.68%), Postives = 303/314 (96.50%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           MGKGSYV+GPL EEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGT EGAPDVKIWLQ
Sbjct: 73  MGKGSYVDGPLQEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTLEGAPDVKIWLQ 132

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
            +KNGSWHSPIVADEEPD+PMWNPVLFKLPSDELLLFY+VGQ+VQ+WSGCMKRSYDKG T
Sbjct: 133 AFKNGSWHSPIVADEEPDIPMWNPVLFKLPSDELLLFYKVGQEVQKWSGCMKRSYDKGIT 192

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGR+WRKFGPIY
Sbjct: 193 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRSWRKFGPIY 252

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           M+NRSLSVIQPVPYQTANGNLRVLLRSFTGI+SICMSES DGGHNWS+A PTNLPNPNSG
Sbjct: 253 MKNRSLSVIQPVPYQTANGNLRVLLRSFTGIDSICMSESNDGGHNWSFAIPTNLPNPNSG 312

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSW DVMTLEDEP  EFSYPAVIEASD 
Sbjct: 313 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWQDVMTLEDEPENEFSYPAVIEASDD 372

Query: 301 SVHITYTYNRQQIK 315
           S+HITYTY R+QIK
Sbjct: 373 SIHITYTYRRKQIK 386

[Close]

BLAST of Cla018788 vs. NCBI nr
Match: gi|778660367|ref|XP_011656129.1| (PREDICTED: uncharacterized protein LOC101219119 isoform X2 [Cucumis sativus])

HSP 1 Score: 617.8 bits (1592), Expect = 1.0e-173
Identity = 291/314 (92.68%), Postives = 303/314 (96.50%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           MGKGSYV+GPL EEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGT EGAPDVKIWLQ
Sbjct: 1   MGKGSYVDGPLQEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTLEGAPDVKIWLQ 60

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
            +KNGSWHSPIVADEEPD+PMWNPVLFKLPSDELLLFY+VGQ+VQ+WSGCMKRSYDKG T
Sbjct: 61  AFKNGSWHSPIVADEEPDIPMWNPVLFKLPSDELLLFYKVGQEVQKWSGCMKRSYDKGIT 120

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGR+WRKFGPIY
Sbjct: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRSWRKFGPIY 180

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           M+NRSLSVIQPVPYQTANGNLRVLLRSFTGI+SICMSES DGGHNWS+A PTNLPNPNSG
Sbjct: 181 MKNRSLSVIQPVPYQTANGNLRVLLRSFTGIDSICMSESNDGGHNWSFAIPTNLPNPNSG 240

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSW DVMTLEDEP  EFSYPAVIEASD 
Sbjct: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWQDVMTLEDEPENEFSYPAVIEASDD 300

Query: 301 SVHITYTYNRQQIK 315
           S+HITYTY R+QIK
Sbjct: 301 SIHITYTYRRKQIK 314

[Close]

BLAST of Cla018788 vs. NCBI nr
Match: gi|802633446|ref|XP_012077478.1| (PREDICTED: uncharacterized protein LOC105638296 isoform X2 [Jatropha curcas])

HSP 1 Score: 552.4 bits (1422), Expect = 5.2e-154
Identity = 256/314 (81.53%), Postives = 281/314 (89.49%), Query Frame = 1


Query: 1   MGKGSYVEGPLLEEFTFPANSVPFNNCHASTIVEVDKDHYLVAYFGGTFEGAPDVKIWLQ 60
           M K  Y+ GPL +EFTFPA SVPFNNCHASTIVEVDKDH+LVAYFGGT EGAPDVKIWLQ
Sbjct: 15  MRKDCYIGGPLKDEFTFPAKSVPFNNCHASTIVEVDKDHFLVAYFGGTMEGAPDVKIWLQ 74

Query: 61  TYKNGSWHSPIVADEEPDVPMWNPVLFKLPSDELLLFYRVGQDVQRWSGCMKRSYDKGGT 120
           TYK+G W SPI+ DE+P+VP+WNPVLFKLPS+ELLLFY++GQD QRWSGC+KRSYDKG T
Sbjct: 75  TYKSGQWQSPIIVDEQPEVPLWNPVLFKLPSEELLLFYKIGQDFQRWSGCLKRSYDKGVT 134

Query: 121 WTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRTWRKFGPIY 180
           WT REQLPPGILGP KNKPILLENG+LLCGSSVESWNSWGAWMEVT+D+GRTW+K+GPIY
Sbjct: 135 WTEREQLPPGILGPSKNKPILLENGLLLCGSSVESWNSWGAWMEVTADAGRTWKKYGPIY 194

Query: 181 MENRSLSVIQPVPYQTANGNLRVLLRSFTGINSICMSESTDGGHNWSYAKPTNLPNPNSG 240
           +EN  LSVIQPVP+QTA G LRVLLRSF GI+ ICMSES DGG NW YAKPT LPNPNSG
Sbjct: 195 IENTPLSVIQPVPFQTAKGTLRVLLRSFNGIDRICMSESYDGGLNWGYAKPTELPNPNSG 254

Query: 241 IDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWLDVMTLEDEPGKEFSYPAVIEASDG 300
           IDGVKLRDGRLLL YNT+SRGVLKV LS DDGDSW DV+TLE+    EFSYPAVI+ASDG
Sbjct: 255 IDGVKLRDGRLLLAYNTISRGVLKVALSEDDGDSWYDVITLEENLDMEFSYPAVIQASDG 314

Query: 301 SVHITYTYNRQQIK 315
           SVHI+YTYNR QIK
Sbjct: 315 SVHISYTYNRTQIK 328

The following BLAST results are available for this feature:

BLAST of Cla018788 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWB7_CUCSA	7.1e-174	92.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G295130 PE=4 SV=1	[more]
I1MSV5_SOYBN	4.9e-151	79.37	Uncharacterized protein OS=Glycine max GN=GLYMA_17G067600 PE=4 SV=1	[more]
A0A0R0F8V6_SOYBN	1.4e-150	79.30	Uncharacterized protein OS=Glycine max GN=GLYMA_17G067600 PE=4 SV=1	[more]
I1MSV3_SOYBN	1.4e-150	79.30	Uncharacterized protein OS=Glycine max GN=GLYMA_17G067600 PE=4 SV=1	[more]
A0A0B2Q8F7_GLYSO	1.4e-150	79.37	Uncharacterized protein OS=Glycine soja GN=glysoja_005752 PE=4 SV=1	[more]

BLAST of Cla018788 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107416\|ref\|XP_008453663.1\|	1.3e-176	94.27	PREDICTED: uncharacterized protein LOC103494313 isoform X1 [Cucumis melo]	[more]
gi\|659107418\|ref\|XP_008453664.1\|	1.3e-176	94.27	PREDICTED: uncharacterized protein LOC103494313 isoform X2 [Cucumis melo]	[more]
gi\|449464334\|ref\|XP_004149884.1\|	1.0e-173	92.68	PREDICTED: uncharacterized protein LOC101219119 isoform X1 [Cucumis sativus]	[more]
gi\|778660367\|ref\|XP_011656129.1\|	1.0e-173	92.68	PREDICTED: uncharacterized protein LOC101219119 isoform X2 [Cucumis sativus]	[more]
gi\|802633446\|ref\|XP_012077478.1\|	5.2e-154	81.53	PREDICTED: uncharacterized protein LOC105638296 isoform X2 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011040	Sialidase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU41958	watermelon EST collection version 2.0	transcribed_cluster
WMU73754	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla018788	Cla018788.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU41958	WMU41958	transcribed_cluster
WMU73754	WMU73754	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011040	Sialidases	GENE3D	G3DSA:2.120.10.10		coord: 15..314 score: 1.8
IPR011040	Sialidases	PFAM	PF13088	BNR_2	coord: 41..304 score: 1.0
IPR011040	Sialidases	unknown	SSF50939	Sialidases	coord: 17..314 score: 2.44
None	No IPR available	PANTHER	PTHR33307	FAMILY NOT NAMED	coord: 11..315 score: 6.6E
None	No IPR available	PANTHER	PTHR33307:SF2	BNR/ASP-BOX REPEAT FAMILY PROTEIN	coord: 11..315 score: 6.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla018788	Cla97C06G122270	Watermelon (97103) v2	wmwmbB406
Cla018788	Csa1G295130	Cucumber (Chinese Long) v2	cuwmB083
Cla018788	MELO3C017513	Melon (DHL92) v3.5.1	mewmB289
Cla018788	ClCG06G012960	Watermelon (Charleston Gray)	wcgwmB344
Cla018788	CSPI01G18330	Wild cucumber (PI 183967)	cpiwmB086
Cla018788	Cucsa.063760	Cucumber (Gy14) v1	cgywmB058
Cla018788	CmaCh10G004250	Cucurbita maxima (Rimu)	cmawmB071
Cla018788	CmoCh10G004570	Cucurbita moschata (Rifu)	cmowmB063
Cla018788	LsiUNG000940	Bottle gourd (USVL1VR-Ls)	lsiwmB006
Cla018788	Cp4.1LG18g06030	Cucurbita pepo (Zucchini)	cpewmB372
Cla018788	CsGy1G018390	Cucumber (Gy14) v2	cgybwmB079
Cla018788	MELO3C029512.2	Melon (DHL92) v3.6.1	medwmB283
Cla018788	Carg15265	Silver-seed gourd	carwmB0789
Cla018788	CsaV3_1G029530	Cucumber (Chinese Long) v3	cucwmB091
Cla018788	Bhi02G000623	Wax gourd	wgowmB684

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla018788	Cucumber (Chinese Long) v3	cucwmB182
Cla018788	Cucumber (Chinese Long) v3	cucwmB188
Cla018788	Watermelon (97103) v2	wmwmbB391
Cla018788	Watermelon (97103) v2	wmwmbB392
Cla018788	Wax gourd	wgowmB156
Cla018788	Wax gourd	wgowmB153
Cla018788	Watermelon (97103) v1	wmwmB164
Cla018788	Watermelon (97103) v1	wmwmB166
Cla018788	Cucumber (Gy14) v1	cgywmB107
Cla018788	Cucumber (Gy14) v1	cgywmB110
Cla018788	Cucurbita maxima (Rimu)	cmawmB143
Cla018788	Cucurbita moschata (Rifu)	cmowmB128
Cla018788	Melon (DHL92) v3.5.1	mewmB435
Cla018788	Melon (DHL92) v3.5.1	mewmB441
Cla018788	Watermelon (Charleston Gray)	wcgwmB114
Cla018788	Cucumber (Chinese Long) v2	cuwmB169
Cla018788	Cucumber (Chinese Long) v2	cuwmB176
Cla018788	Cucurbita pepo (Zucchini)	cpewmB679
Cla018788	Bottle gourd (USVL1VR-Ls)	lsiwmB121
Cla018788	Bottle gourd (USVL1VR-Ls)	lsiwmB124
Cla018788	Bottle gourd (USVL1VR-Ls)	lsiwmB416
Cla018788	Cucumber (Gy14) v2	cgybwmB160
Cla018788	Cucumber (Gy14) v2	cgybwmB167
Cla018788	Melon (DHL92) v3.6.1	medwmB427
Cla018788	Silver-seed gourd	carwmB0507