Cla017172 (gene) Watermelon (97103) v1

Overview
NameCla017172
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionTryptophan synthase alpha chain (AHRD V1 **** Q8LA83_ARATH); contains Interpro domain(s) IPR002028 Tryptophan synthase, alpha chain
LocationChr10 : 19176395 .. 19181173 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATTGCATTCAAATCTTCGAGGTTTCTTCCGCTCAACAAGATACCCAGTACGCCTGCCTTTTCTTCACGTCCTTGTAAGATTTCAGTCTCCCAATCCAAGCGGTTTGCTCCAATGGCTGCTCTTGCAGCTTCCCCTGCTGTTGGACTGTCCGAAACCTTCAACAAATTGAGAGAACAAGGGAAGGTAAATGTCTCTTTCTACTGTTTACAATGTATCAATAACTTCATCTTTTTCTTTTTTTTTTTTACTCTGCCTTTTCTGTATGAAATCTTTATATGGTTTGTTTGTTTGTTTGAATTTTCAATTGTTTTCATTGGATTATACTTTTTTTGCATTTGGTGTTTTGTTGGTTGGTATTGAAAGGACAAGTTATGTGCTTGTATGTATGGGAGTGATTTTGAAATTGTTGAAATCAACTTTGCATGTTCAAAATAACTTCGAAATATGTCTTTAATCACTGAAAATTAGTTTAATATTTAATTTCAATTTTCATGTAATCAAAATTGGTTTTGAATAATTAAAAACATATTTGAGAGTAATTTTGAAAATGACAAAAGTAATTTTTTGGTATTTGAGAGATTGTCTTTTTGATATCTACTTTAAAAAGTTGTTAAGAACTTATAGGCTTGTGTTTATTTATTCTCTGGACTTTAAAAAGATTATAGTACATTCTTAAACTTGTAAGTAGTTGTTGTTAGCTCCGTCAATTTAAGGCTTGGTTCACCTAATGTTTGAACCGACTTGAAATCAGCTTGCCATCTAATCCGCAAGTAATGCAATCAACATGTCACATAAGCGTTGAATTGACAGAATTGACGATGGAGACCTATTAGACATAAAAGTAAAAGTTTAAGATCTACCAGAAACATTTTGAAGTAATTAGATAGACACAACCTTGAATGGTGAAGGTCCTATTAGAATCTATTTGAAATACTGAGACTAGACTCAACTTCAAATTTATTGGTTCTGTCTGCTACTTTCTATGTGGTCTGATGGGATTTTTTCATTGATCAACGCTGTCCTAACTGCATTCTTGCTTTAAAGGTCGCATTGATCCCCTACATCACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAGGCATTGAAGGTGCTTTCGACTTGTGGATCAGATATAATTGAACTTGGTGTTCCCTATTCGGATCCCTTGGCAGATGGTCCTGTTATACAGGTTACTTTCTTCTCTTTTTTTTTTCCCCTCCCTTTCAATTCTCCATTTCTAATCTATTGTTCCTTATTCGCTGTTTTATGACTGTTTTTCTGTAGGCTGCAGCCACTCGGTCCTTGGCTAGGGAGACAAACTTTAATGCAATCATTTCTATGCTGAAGGGGGTAATATTGTTCTACCATGCAACATGCTGTAAATAATATCAGCTTTTATTCCACTTTGAGGCAATTAGAAAGAATAGCCAAAACTTATTTTGTTCGCTATTTCTATTATGACTTATGATATGACAGATCTTTTTTTTTTCTTTTTTCTTTTTTGGGAAACTAGATATAATGAAGTGTAGTAACGAAATCATTTAGATGATGATGCATTTCGACAGACTGTCAAGTTTAGTACTCAAATTGTTAGGAAACTTGGAGTTTGCATGTTCATTTTTTCACATGGCATCTTCAAATAAAATGTCTATGGAAATATTTACCCAGTACGCTGTGGTTCACTGCCCTTTAGCCTTTCATTCATGAAACATACAGTCTAACATGTTTTTGTTTTGTTTCTGGCTGGTCAGGTGATTCCTGAACTATCTTGTCCAATTTCCCTTTTTACATATTATAACCCAATTCTTAAACGTGGCATTGAGAACTTTATGATGATAATAAAAGATGCTGGTGTGCGAGGTAATTAATGAGCTTGCCAAATTTTCTTCTAATGAATTAGATTTTTTTATAATTAATTTAACACTGTCCTACTTCGAAGATGACATGGTAAAGGCTAGGCCAATGGTTAATTTTGTAAGTATAGGGTTAGGTTACTAGTTAGGTGGTGGTGGCTTGAGCAAGAGGCTACTACCCAATAGGGCAAAATGAATTTACCTTGGAACATTATTTGTGTCTATTTCAATTCCCCGTTGATTATTGAACTTTAGACAATCAACTACATGATTATTTTTCAGGAGCCTAAAATACAACAGTTTAAAAGAATATGCCATTACTCCTAATAGTATTGGATGGGTGCTGATGTTTGAATTCTTTAAAAAACTGGAATATTTTATTTAAAGCTGTATAGAATATTGCATGAGTTTTTCAATATGTTATGAAGTGTTGTCAACCAACCATAACCAACCATAATTCAATGGATAAAGACACCAATTATCATCTCAAATGTCGATGGTTCAATTCCCATGTATTATTACATGTAATGTACAAAATCTTGACTTGGTTTTTCTTTGTTAGAAAGTTCCATGGGAAGTGTGTCATATTTCTCAACATTGGGTTCGTGAATATGTTTGTGGACTGTGCTCACATTTCACTTTCTTACAGGGCTTGTTGTTCCAGATGTTCCTCTTGAGGAGACTGAAATTTTAAGAAAGGAAGCTGTAAAGTACAATATTGAACTGGTAATTTCTTTTTCTCGTAATGGTTGTATAGACTATCTAAATCATTTGCTAGTTTTTAGGTTTTGATATTTATTTCACTTTTACCTTGGGATATTGGACTCTGTGCTTTTAGACCTCTGGAACATGGATGCTGAGCATGTGAAACACTTCACAGATCGTGATAACTGCTTCATTGCAGTTCTTAAAGATTAGTTTTATTAATTGCCTGAACCTGAAGGAAAGACCTTCAGGAGCGGATAATGAGAAGAAACTTTCTGGATCAATTGTTCAACTATACCAACTTGCATTTTTTTCTCTTTATGACCAACTTAATGAGGAAATGAATAGCCAATTCGTTGACTCATTCTTGTTACAGTCACTTTACTATAAGAAAAAAACTTGGTCGTTAAACCTTGAGTTGATTGCTTGTTCTTATGTTTATGTATTTTATATTATTCTTTTACATTGCTAAAGGTACTCTTAACTACACCAACCACGCCAAAAGATAGGATGAAAAACATCGCTGAAGCTTCAGAGGGATTTGTTTATCTTGTAAGGCCTTTTCTGTTTTATCTCTCTTTATATGCTCTAACTATTGATCTTTGTCATCTCATTGGAGCCTACTGGTCTCATTTATAAAAAGATGAAGTTTAGTAATTTTCTTTCTATCTTGAATTTAATATTCAAAATTAATTTAATTCCACACATATTTCTATCACAAAATAAGAAAAGAGGAGTTCATATTGAAGTTCTTTCTTGAAATTATTTTGCTAGCATCATAGAAGCATATCTAGTGTGTTCCCAAGATTCTTTTTTCAGAATGACATTAACAATGTGGGTGTCGATGAGACTTATCCTTTGCCTTATTCCTTCAAATTGACATGCTGGAATGTTGAGAAAGTTTAGACACCTAAGTCTCAGCTCTTATTATACAAGATCATTACCAAAGTTATAGGTAAAAGACTTGAAAGTTCCTTCCAAACTCGATTATTGAATTTCAAAAACCTTTCATTGGGGATTAAAAAGGGGTGAGGTCATTAAGTTGGGCCTCGAAGAAACTGTTGATAAAACTGATTGGAGCTTTTTAAATGCACTTGCTTTGCTGCTTGTCTCTCTGGTGCCAATTCCTCTGTCATTACCCATGGAAAACCAAGAGGGAAGATCAAGGCTTTTCGAGGAATTAAGCCAGGGGACCTCTTCTCCCCTTTTCCTTTGCTCCAAAAGTTAAATGATTCTGAATTAGTGAAAGGATTCAAAGTTGGTAGAAGCAACTTAATTATTTTATCTTATTATACATCTTTTTTATGAGAAACTAAACTTTTGTAGAGATGAATAAAAGGACGAACAATTATGAAAAGAAAATTGCTACTATAAGAGAGACAATGAAATTGAAGAGACCAAAAACGAAAGAAAGTTGCAGTAAAAGGCTCTAATTGTTTCCAAAAGTCTTGATGTTGGATTAACAATATTCCTTTGGGAGAAGAGAGACTGACTTCTGCTTGATGGGAGTATATTGTTCTCGTGGCTTTGTCTTCATGTACAGACAGAATTTTATAGATAGCATAGAGAGAGAGAGAGCAAGGATTTTGATGAGAAAACAATTTTCTCCCTTTATCATTATTGAATTAACGTTTCGTTGTCAAATTAGACTTCTATTGTCATTCACTGTCTTACTTGCGATATGAAATATATTGTTCAAATCGTAGGTGAGCTCCGTTGGAGTTACCGGTACCCGCACATCAGTTAGTGGTAGAGTTCAAACTCTCCTTGAGGAAGTTAAAGAGGTATGTCAATAGTCAATATATGAGGAAGTACTTGCAGTAAATACAAATTTGTACTTGAAAACAAAGTTTTGGACTTCGAAACCTAATGGTGTTTGAAAGGCATTGATTTGCAACTGATGAATAACTTAGACGCCTCACAATCTGCTTTCCACGACAGGTTACGAAAAAACCAGTAGCAGTTGGTTTTGGTATATCAAAACCCGAGCATGTGAAACAGGTAAAGAACTTCCTCACATAACATAACATCCAATCAATTGTACAATCTATTTGATATGTACTTGCTGGTGTTCATAGGTGGCTGACTGGGGGGCAGATGGTATTATTATTGGTAGTGCTATGGTGAAGCTGTTGGGTGAAGCCCAATCCCCTGAGGAAGGATTGAAGGAGCTTGAAAACTTCACCATATCCTTGAAATCTGCACTCTCTTGA

mRNA sequence

ATGGACATTGCATTCAAATCTTCGAGGTTTCTTCCGCTCAACAAGATACCCAGTACGCCTGCCTTTTCTTCACGTCCTTGTAAGATTTCAGTCTCCCAATCCAAGCGGTTTGCTCCAATGGCTGCTCTTGCAGCTTCCCCTGCTGTTGGACTGTCCGAAACCTTCAACAAATTGAGAGAACAAGGGAAGGTCGCATTGATCCCCTACATCACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAGGCATTGAAGGTGCTTTCGACTTGTGGATCAGATATAATTGAACTTGGTGTTCCCTATTCGGATCCCTTGGCAGATGGTCCTGTTATACAGGCTGCAGCCACTCGGTCCTTGGCTAGGGAGACAAACTTTAATGCAATCATTTCTATGCTGAAGGGGGTGATTCCTGAACTATCTTGTCCAATTTCCCTTTTTACATATTATAACCCAATTCTTAAACGTGGCATTGAGAACTTTATGATGATAATAAAAGATGCTGGTGTGCGAGGGCTTGTTGTTCCAGATGTTCCTCTTGAGGAGACTGAAATTTTAAGAAAGGAAGCTGTAAAGTACAATATTGAACTGGTACTCTTAACTACACCAACCACGCCAAAAGATAGGATGAAAAACATCGCTGAAGCTTCAGAGGGATTTGTTTATCTTGTGAGCTCCGTTGGAGTTACCGGTACCCGCACATCAGTTAGTGGTAGAGTTCAAACTCTCCTTGAGGAAGTTAAAGAGGTTACGAAAAAACCAGTAGCAGTTGGTTTTGGTATATCAAAACCCGAGCATGTGAAACAGGTGGCTGACTGGGGGGCAGATGGTATTATTATTGGTAGTGCTATGGTGAAGCTGTTGGGTGAAGCCCAATCCCCTGAGGAAGGATTGAAGGAGCTTGAAAACTTCACCATATCCTTGAAATCTGCACTCTCTTGA

Coding sequence (CDS)

ATGGACATTGCATTCAAATCTTCGAGGTTTCTTCCGCTCAACAAGATACCCAGTACGCCTGCCTTTTCTTCACGTCCTTGTAAGATTTCAGTCTCCCAATCCAAGCGGTTTGCTCCAATGGCTGCTCTTGCAGCTTCCCCTGCTGTTGGACTGTCCGAAACCTTCAACAAATTGAGAGAACAAGGGAAGGTCGCATTGATCCCCTACATCACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAGGCATTGAAGGTGCTTTCGACTTGTGGATCAGATATAATTGAACTTGGTGTTCCCTATTCGGATCCCTTGGCAGATGGTCCTGTTATACAGGCTGCAGCCACTCGGTCCTTGGCTAGGGAGACAAACTTTAATGCAATCATTTCTATGCTGAAGGGGGTGATTCCTGAACTATCTTGTCCAATTTCCCTTTTTACATATTATAACCCAATTCTTAAACGTGGCATTGAGAACTTTATGATGATAATAAAAGATGCTGGTGTGCGAGGGCTTGTTGTTCCAGATGTTCCTCTTGAGGAGACTGAAATTTTAAGAAAGGAAGCTGTAAAGTACAATATTGAACTGGTACTCTTAACTACACCAACCACGCCAAAAGATAGGATGAAAAACATCGCTGAAGCTTCAGAGGGATTTGTTTATCTTGTGAGCTCCGTTGGAGTTACCGGTACCCGCACATCAGTTAGTGGTAGAGTTCAAACTCTCCTTGAGGAAGTTAAAGAGGTTACGAAAAAACCAGTAGCAGTTGGTTTTGGTATATCAAAACCCGAGCATGTGAAACAGGTGGCTGACTGGGGGGCAGATGGTATTATTATTGGTAGTGCTATGGTGAAGCTGTTGGGTGAAGCCCAATCCCCTGAGGAAGGATTGAAGGAGCTTGAAAACTTCACCATATCCTTGAAATCTGCACTCTCTTGA

Protein sequence

MDIAFKSSRFLPLNKIPSTPAFSSRPCKISVSQSKRFAPMAALAASPAVGLSETFNKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLARETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRVQTLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKELENFTISLKSALS
Homology
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BLAST of Cla017172 vs. Swiss-Prot
Match: TRPA2_ARATH (Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana GN=TSA1 PE=1 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.3e-117
Identity = 221/312 (70.83%), Postives = 257/312 (82.37%), Query Frame = 1 

Query: 1   MDIAFKSSRFLPLNKIPSTPAFSSRPCKISVSQSKRFAPMAALA-ASPAVGLSETFNKLR 60
           M IAFKS  F   +         S P   S+S  KRF PMA+L+ +SP +GL++TF +L+
Sbjct: 1   MAIAFKSGVFFLQSPKSQIGFRHSSPPDSSLS-FKRFTPMASLSTSSPTLGLADTFTQLK 60

Query: 61  EQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSL 120
           +QGKVA IPYITAGDPDLSTTAEALKVL  CGSDIIELGVPYSDPLADGPVIQAAATRSL
Sbjct: 61  KQGKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSL 120

Query: 121 ARETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPL 180
            R TN ++I+ ML  V+P++SCPISLFTYYNPILKRG+  FM  I+  GV+GLVVPDVPL
Sbjct: 121 ERGTNLDSILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSSIRAVGVQGLVVPDVPL 180

Query: 181 EETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRV 240
           EETE+LRKEA+  +IELVLLTTPTTP +RMK I +ASEGF+YLVSS+GVTG R+SVSG+V
Sbjct: 181 EETEMLRKEALNNDIELVLLTTPTTPTERMKLIVDASEGFIYLVSSIGVTGARSSVSGKV 240

Query: 241 QTLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKE 300
           Q+LL+++KE T KPVAVGFGISKPEHVKQ+A WGADG+I+GSAMVKLLG+A+SP EGLKE
Sbjct: 241 QSLLKDIKEATDKPVAVGFGISKPEHVKQIAGWGADGVIVGSAMVKLLGDAKSPTEGLKE 300

Query: 301 LENFTISLKSAL 312
           LE  T SLKSAL
Sbjct: 301 LEKLTKSLKSAL 311

[Close]
BLAST of Cla017172 vs. Swiss-Prot
Match: TRPA1_ARATH (Tryptophan synthase alpha chain OS=Arabidopsis thaliana GN=TRPA1 PE=1 SV=2)

HSP 1 Score: 423.3 bits (1087), Expect = 2.3e-117
Identity = 211/266 (79.32%), Postives = 239/266 (89.85%), Query Frame = 1 

Query: 46  SPAVGLSETFNKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPL 105
           S  VGLSETF +L+ QGKVALIPYITAGDPDLSTTA+ALKVL +CGSDIIELGVPYSDPL
Sbjct: 8   SSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSDPL 67

Query: 106 ADGPVIQAAATRSLARETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIK 165
           ADGP IQAAA RSL + TNFN+IISMLK VIP+LSCPI+LFTYYNPIL+RG+EN+M +IK
Sbjct: 68  ADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTVIK 127

Query: 166 DAGVRGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSS 225
           +AGV GL+VPDVPLEETE LR EA K+ IELVLLTTPTTPK+RM  I EASEGF+YLVSS
Sbjct: 128 NAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLVSS 187

Query: 226 VGVTGTRTSVSGRVQTLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVK 285
           VGVTGTR SV+ +VQ+LL+++KE T KPVAVGFGISKPEHVKQVA+WGADG+I+GSAMVK
Sbjct: 188 VGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAMVK 247

Query: 286 LLGEAQSPEEGLKELENFTISLKSAL 312
           +LGE++SPE+GLKELE FT SLKSAL
Sbjct: 248 ILGESESPEQGLKELEFFTKSLKSAL 273

[Close]
BLAST of Cla017172 vs. Swiss-Prot
Match: TRPA_MAIZE (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2)

HSP 1 Score: 319.7 bits (818), Expect = 3.5e-86
Identity = 164/296 (55.41%), Postives = 210/296 (70.95%), Query Frame = 1 

Query: 16  IPSTPAFSSRPCKISVSQSKRFAPMAALAASPAVGLSETFNKLREQGKVALIPYITAGDP 75
           +P+ P  +  P  +   Q+      AA A   +  +S+T   L  +GK A IPYITAGDP
Sbjct: 61  VPAAPPQAPAPAPVPPKQA------AAPAERRSRPVSDTMAALMAKGKTAFIPYITAGDP 120

Query: 76  DLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLARETNFNAIISMLKGV 135
           DL+TTAEAL++L  CG+D+IELGVP SDP  DGP+IQA+  R+LA  T  +A++ ML+ V
Sbjct: 121 DLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREV 180

Query: 136 IPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPLEETEILRKEAVKYNIE 195
            PELSCP+ L +YY PI+ R +      +K+AGV GL+VPD+P      L  EA   N+E
Sbjct: 181 TPELSCPVVLLSYYKPIMSRSLAE----MKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLE 240

Query: 196 LVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRVQTLLEEVKEVTKKPVA 255
           LVLLTTP  P+DRMK I +ASEGFVYLVS  GVTG R +V+ RV++L++EVK+VT KPVA
Sbjct: 241 LVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVA 300

Query: 256 VGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKELENFTISLKSAL 312
           VGFGISKPEHVKQ+A WGADG+IIGSAMV+ LGEA SP++GL+ LE +   +K+AL
Sbjct: 301 VGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKNAL 346

[Close]
BLAST of Cla017172 vs. Swiss-Prot
Match: TRPA_CYAP4 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpA PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 8.4e-80
Identity = 149/264 (56.44%), Postives = 192/264 (72.73%), Query Frame = 1 

Query: 49  VGLSETFNKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADG 108
           V +S  F+ LR++ + ALIP+ITAGDP L  TA+AL+VL   G+D+IELGVPYSDPLADG
Sbjct: 2   VSVSTCFSALRDRAQCALIPFITAGDPSLEITAKALQVLDQQGADLIELGVPYSDPLADG 61

Query: 109 PVIQAAATRSLARETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAG 168
           P IQAAATR+L + T  +A++ M+  V P L  P+ LFTYYNPI  RG+E F+  +  AG
Sbjct: 62  PTIQAAATRALQKGTRLDAVLEMISHVAPNLRSPLILFTYYNPIFHRGVEPFLQQVAQAG 121

Query: 169 VRGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGV 228
           V+GLVVPD+PLEE + +  +A    IEL LL  PTTP+ R+  IAE S+GF+YLVS+ GV
Sbjct: 122 VQGLVVPDLPLEEADTVLTQAAAVGIELTLLVAPTTPRSRIAAIAERSQGFIYLVSTTGV 181

Query: 229 TGTRTSVSGRVQTLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLG 288
           TG R+ V GRV  LL E+++VT KP+ VGFGIS+PEH +QV +WGAD  I+GSA VK L 
Sbjct: 182 TGMRSKVEGRVHELLLELQQVTDKPIGVGFGISQPEHARQVMEWGADAAIVGSAFVKRLA 241

Query: 289 EAQSPEEGLKELENFTISLKSALS 313
           E  +PE+GL  + +F  SLK+AL+
Sbjct: 242 EG-TPEQGLAAIADFCRSLKTALT 264

[Close]
BLAST of Cla017172 vs. Swiss-Prot
Match: TRPA_ACAM1 (Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) GN=trpA PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-79
Identity = 148/261 (56.70%), Postives = 191/261 (73.18%), Query Frame = 1 

Query: 51  LSETFNKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPV 110
           +S+ F +LR++G+ ALIP++TAGDPDL+TTA AL+ L   G+D+IELGVPYSDPLADGPV
Sbjct: 4   VSDCFAQLRDRGQCALIPFLTAGDPDLATTASALRQLDASGADLIELGVPYSDPLADGPV 63

Query: 111 IQAAATRSLARETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVR 170
           IQAAATR+L R T  + ++ M+  + PE+  PI LFTYYNPI  RG+  F+  I  AGVR
Sbjct: 64  IQAAATRALQRGTRLDQVLEMVTELSPEIRAPIILFTYYNPIYHRGVAEFLQQIAKAGVR 123

Query: 171 GLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTG 230
           GLVVPD+PLEE+E L ++A    IE+ LL  PT+ K+R++ IA  S+GF+YLVS+ GVTG
Sbjct: 124 GLVVPDLPLEESENLLQQAADLGIEVTLLVAPTSSKERIEKIALRSQGFIYLVSTTGVTG 183

Query: 231 TRTSVSGRVQTLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEA 290
            RT V  RVQ L+ ++++VT KP+ VGFGIS+ EH +QV DWGAD  I+GSA V  L E 
Sbjct: 184 MRTKVENRVQDLIADLRQVTDKPIGVGFGISRTEHARQVMDWGADAAIVGSAFVNRLSEG 243

Query: 291 QSPEEGLKELENFTISLKSAL 312
            SP +GL  +  F  SLKS+L
Sbjct: 244 -SPSQGLSAISTFCRSLKSSL 263

[Close]
BLAST of Cla017172 vs. TrEMBL
Match: V4TUM1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021275mg PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 9.3e-126
Identity = 229/286 (80.07%), Postives = 253/286 (88.46%), Query Frame = 1 

Query: 26  PCKISVSQSKRFAPMAALAASPAVGLSETFNKLREQGKVALIPYITAGDPDLSTTAEALK 85
           PC  S    KRF PMAAL ASP VGL+ETF +L++QGKVALIPYITAGDPDLSTTAEALK
Sbjct: 25  PCHKSTLSLKRFTPMAALTASPTVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALK 84

Query: 86  VLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLARETNFNAIISMLKGVIPELSCPISL 145
           +L +CGSDIIELGVPYSDPLADGPVIQAAATRSLAR TNFNAI+SMLK V+P++SCPI+L
Sbjct: 85  LLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIAL 144

Query: 146 FTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTP 205
           FTYYNPILKRG++NFM  ++D G+RGLVVPDVPLEETE L+KEA+K  IELVL TTPTTP
Sbjct: 145 FTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTP 204

Query: 206 KDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRVQTLLEEVKEVTKKPVAVGFGISKPEH 265
            DRMK I EASEGFVYLVSS+GVTG R S+SG VQTLL E+KE T KPVAVGFGISKPEH
Sbjct: 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEH 264

Query: 266 VKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKELENFTISLKSAL 312
           V+QVA WGADG+I+GSAMVKLLGEAQSPEEGLKELE F  SLKSAL
Sbjct: 265 VQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 310

[Close]
BLAST of Cla017172 vs. TrEMBL
Match: A0A067FZB6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021527mg PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.7e-125
Identity = 228/286 (79.72%), Postives = 253/286 (88.46%), Query Frame = 1 

Query: 26  PCKISVSQSKRFAPMAALAASPAVGLSETFNKLREQGKVALIPYITAGDPDLSTTAEALK 85
           PC  S    KRF PMAAL ASP VGL+ETF +L++QGKVALIPYITAGDPDLSTTAEALK
Sbjct: 25  PCHKSTLSLKRFTPMAALTASPTVGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALK 84

Query: 86  VLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLARETNFNAIISMLKGVIPELSCPISL 145
           +L +CGSDIIELGVPYSDPLADGPVIQAAATRSLAR TNFNAI+SMLK V+P++SCPI+L
Sbjct: 85  LLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQMSCPIAL 144

Query: 146 FTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTP 205
           FTYYNPILKRG++NFM  ++D G+RGLVVPDVPLEETE L+KEA+K  IELVL TTPTTP
Sbjct: 145 FTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTP 204

Query: 206 KDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRVQTLLEEVKEVTKKPVAVGFGISKPEH 265
            DRMK I EASEGFVYLVSS+GVTG R S+SG VQTLL E+KE + KPVAVGFGISKPEH
Sbjct: 205 TDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEH 264

Query: 266 VKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKELENFTISLKSAL 312
           V+QVA WGADG+I+GSAMVKLLGEAQSPEEGLKELE F  SLKSAL
Sbjct: 265 VQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 310

[Close]
BLAST of Cla017172 vs. TrEMBL
Match: A0A0K9QXB7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_137970 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 5.1e-124
Identity = 238/313 (76.04%), Postives = 260/313 (83.07%), Query Frame = 1 

Query: 1   MDIAFKSSRFLPLNKIPSTPAFSSRPCKISVSQSKRFAPMAALA--ASPAVGLSETFNKL 60
           M IAFKS+ FL  NK   T  F +    I +S  + F  MA+LA  A P VGLSETF KL
Sbjct: 1   MAIAFKSTIFLQ-NKRFETQPFPASSSSIRLSARRTFTTMASLAVAAKPVVGLSETFKKL 60

Query: 61  REQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRS 120
           REQ KVALIPYITAGDPDLSTTAEALKVL +CGSDIIELGVPYSDPLADGPVIQAAATR+
Sbjct: 61  REQNKVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRA 120

Query: 121 LARETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDVP 180
           LA+  N+++IISMLK VIPELSCPI+LFTYYNPILKRG+ENFM  IKD GV GLVVPDVP
Sbjct: 121 LAKGANYDSIISMLKNVIPELSCPIALFTYYNPILKRGVENFMSTIKDIGVHGLVVPDVP 180

Query: 181 LEETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGR 240
           LEETE LRKEA+KY IELVLLTTPTTPKDRMK I +ASEGFVYLVS VGVTG R  V  R
Sbjct: 181 LEETEGLRKEALKYGIELVLLTTPTTPKDRMKAIVDASEGFVYLVSQVGVTGARADVGAR 240

Query: 241 VQTLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLK 300
           V+ LL E+KE T KPVAVGFGISKPEH+KQVA WGADG+I+GSA VK+LGEA SPEEGLK
Sbjct: 241 VEELLAEIKEATTKPVAVGFGISKPEHIKQVAGWGADGVIVGSAFVKILGEASSPEEGLK 300

Query: 301 ELENFTISLKSAL 312
           ELE FT +LKSAL
Sbjct: 301 ELEKFTKTLKSAL 312

[Close]
BLAST of Cla017172 vs. TrEMBL
Match: A0A0J8CDG2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120250 PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.6e-122
Identity = 231/314 (73.57%), Postives = 263/314 (83.76%), Query Frame = 1 

Query: 1   MDIAFKSSRFLPLNKIP--STPAFSSRPCKISVSQSKRFAPMAALA-ASPAVGLSETFNK 60
           M I+ KS+ FL   +I   S P FS  P  ++VS  K F  MA+LA A   VGLSETFN+
Sbjct: 1   MAISLKSACFLQQRRIETQSFPGFSFSPRVVNVSAKKPFTTMASLATAREVVGLSETFNR 60

Query: 61  LREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATR 120
           LR+Q KVALIP+ITAGDPDLSTTAEALKVL +CGSDIIE+GVPYSDPLADGPVIQAAATR
Sbjct: 61  LRQQNKVALIPFITAGDPDLSTTAEALKVLDSCGSDIIEVGVPYSDPLADGPVIQAAATR 120

Query: 121 SLARETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDV 180
           +L + TN++A+ISML+ V+PELSCPI+LFTYYNPILKRG+E FM  IKD GV GLVVPDV
Sbjct: 121 ALLQGTNYDAVISMLRNVVPELSCPIALFTYYNPILKRGVEKFMSTIKDVGVHGLVVPDV 180

Query: 181 PLEETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSG 240
           PLEETE+LRKEA+ + IELVLLTTPTTPKDRMK I EASEGFVYLVS +GVTG R+ VS 
Sbjct: 181 PLEETEVLRKEALSHGIELVLLTTPTTPKDRMKAIVEASEGFVYLVSQIGVTGARSDVST 240

Query: 241 RVQTLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGL 300
           RVQ LL ++KE T KPVAVGFGISKPEHVKQVA WGADG+I+GSA+VK+LGEA SPEEGL
Sbjct: 241 RVQELLNDIKEATSKPVAVGFGISKPEHVKQVAGWGADGVIVGSAIVKVLGEANSPEEGL 300

Query: 301 KELENFTISLKSAL 312
           K+LE F  SLKSAL
Sbjct: 301 KDLEKFIKSLKSAL 314

[Close]
BLAST of Cla017172 vs. TrEMBL
Match: B9S4R8_RICCO (Trytophan synthase alpha subunit, putative OS=Ricinus communis GN=RCOM_0991580 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 5.3e-121
Identity = 230/312 (73.72%), Postives = 260/312 (83.33%), Query Frame = 1 

Query: 1   MDIAFKSSRFLPLNKIPSTPAFSSRPC-KISVSQSKRFAPMAALAASPAVGLSETFNKLR 60
           M +A KS+     ++ P T      P  K +V  ++RFAPMA L A+  + LSETF+ L+
Sbjct: 1   MAVALKSTTSFLHDRKPETHLLIRSPSYKPTVISTRRFAPMATLTAAKNLSLSETFSNLK 60

Query: 61  EQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSL 120
           ++GKVA IPYITAGDPDLSTTAEALK+L +CGSDIIELGVPYSDPLADGPVIQAAATRSL
Sbjct: 61  KRGKVAFIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSL 120

Query: 121 ARETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPL 180
           AR TNF+AI SMLK V+P+LSCPI+LFTYYNPILKRGIE FM  +KD GV GLVVPDVPL
Sbjct: 121 ARGTNFDAITSMLKEVVPQLSCPIALFTYYNPILKRGIEKFMSTVKDIGVHGLVVPDVPL 180

Query: 181 EETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRV 240
           EETE+LR EA K NIELVLLTTPTTP +RMK I EA+EGFVYLVSSVGVTG R SVS RV
Sbjct: 181 EETELLRNEAAKKNIELVLLTTPTTPTERMKAIVEAAEGFVYLVSSVGVTGARASVSDRV 240

Query: 241 QTLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKE 300
           QTLL+E+KE T KPVAVGFGISKPEHVKQVA WGADG+I+GSAMVK+LGEA+SPEEGL+E
Sbjct: 241 QTLLQEIKEATAKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKVLGEAKSPEEGLEE 300

Query: 301 LENFTISLKSAL 312
           L   T SLKSAL
Sbjct: 301 LATLTKSLKSAL 312

[Close]
BLAST of Cla017172 vs. NCBI nr
Match: gi|659130730|ref|XP_008465320.1| (PREDICTED: tryptophan synthase alpha chain-like [Cucumis melo])

HSP 1 Score: 565.1 bits (1455), Expect = 7.7e-158
Identity = 291/312 (93.27%), Postives = 300/312 (96.15%), Query Frame = 1 

Query: 1   MDIAFKSSRFLPLNKIPSTPAFSSRPCKISVSQSKRFAPMAALAASPAVGLSETFNKLRE 60
           MDIAFK SR LPLNKIP+T  FS RPCKISVSQ+KRFAPMAALAA P VGLSETF KLRE
Sbjct: 1   MDIAFKPSRILPLNKIPNTLIFSPRPCKISVSQTKRFAPMAALAAYPVVGLSETFKKLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPLE 180
           RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRG+ENFMMIIKD GVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRVQ 240
           ETE+LRKEAVK+NIELVLLTTPTTPK+RMK I EASEGFVYLVSS+GVTGTRTSVSGRVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKKIVEASEGFVYLVSSIGVTGTRTSVSGRVQ 240

Query: 241 TLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300
           TLLEEVKEVT+KPVAVGFGISKPEHVKQVA+WGADGIIIGSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTISLKSALS 313
           ENFT SLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]
BLAST of Cla017172 vs. NCBI nr
Match: gi|449446897|ref|XP_004141207.1| (PREDICTED: tryptophan synthase alpha chain [Cucumis sativus])

HSP 1 Score: 559.3 bits (1440), Expect = 4.2e-156
Identity = 290/312 (92.95%), Postives = 298/312 (95.51%), Query Frame = 1 

Query: 1   MDIAFKSSRFLPLNKIPSTPAFSSRPCKISVSQSKRFAPMAALAASPAVGLSETFNKLRE 60
           MDIAFKSSR LPLNKIP+T  FS RPCKISVSQSKRFAPMAALAA P VGLSETF  LRE
Sbjct: 1   MDIAFKSSRILPLNKIPNTLIFSPRPCKISVSQSKRFAPMAALAAYPVVGLSETFKNLRE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVALIPYITAGDPDLSTTAEALKVLS CGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVALIPYITAGDPDLSTTAEALKVLSKCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPLE 180
           RETNFNAIISMLKGVIPELS PISLFTYYNPILKRG+ENFMMIIKD GVRGLVVPDVPLE
Sbjct: 121 RETNFNAIISMLKGVIPELSRPISLFTYYNPILKRGVENFMMIIKDTGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRVQ 240
           ETE+LRKEAVK+NIELVLLTTPTTPK+RMKNI EASEGFVYLVSS+GVTGTRTSVS RVQ
Sbjct: 181 ETEVLRKEAVKHNIELVLLTTPTTPKERMKNIVEASEGFVYLVSSIGVTGTRTSVSSRVQ 240

Query: 241 TLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300
           TLLEEVKEVT+KPVAVGFGISKPEHVKQVA+WGADGIIIGSAMVKLLGEAQSPEEGLKEL
Sbjct: 241 TLLEEVKEVTEKPVAVGFGISKPEHVKQVAEWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300

Query: 301 ENFTISLKSALS 313
           ENFT SLKSALS
Sbjct: 301 ENFTRSLKSALS 312

[Close]
BLAST of Cla017172 vs. NCBI nr
Match: gi|659096912|ref|XP_008449352.1| (PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo])

HSP 1 Score: 508.1 bits (1307), Expect = 1.1e-140
Identity = 264/312 (84.62%), Postives = 280/312 (89.74%), Query Frame = 1 

Query: 1   MDIAFKSSRFLPLNKIPSTPAFSSRPCKISVSQSKRFAPMAALAASPAVGLSETFNKLRE 60
           MD    SSR    NKIP+T  F   PCKISV QSKR  PMA+L AS AVGLSETF+KL+E
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVA IPYITAGDPDLSTTAEALKVLST GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPLE 180
           R TNF+AIISMLK VIPELSCPI+LF+YYNPILKRGI NFM+ IKDAGV+GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRVQ 240
           ETEILRKEAVK+NIELVLLTTPTTP+DRMK I EASEGFVYLVSSVGVTG R SVS +VQ
Sbjct: 181 ETEILRKEAVKHNIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT+KPVAVGFGISKPEHVKQV+ WGADGII+GSAMVKLLGEAQSPEEGLK L
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ENFTISLKSALS 313
           ENFT SLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]
BLAST of Cla017172 vs. NCBI nr
Match: gi|449455268|ref|XP_004145375.1| (PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis sativus])

HSP 1 Score: 505.8 bits (1301), Expect = 5.6e-140
Identity = 263/311 (84.57%), Postives = 279/311 (89.71%), Query Frame = 1 

Query: 1   MDIAFKSSRFLPLNKIPSTPAFSSRPCKISVSQSKRFAPMAALAASPAVGLSETFNKLRE 60
           MDI   SSR    NKIP+T  F   PCKISV QSKR  PMA+L AS AVGLSETF+KL+E
Sbjct: 1   MDIVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVA IPYITAGDPDLSTTAEALKVLST GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIENFMMIIKDAGVRGLVVPDVPLE 180
           R TNF+AIISMLK VIPELSCPI+LF+YYNPILKRGI NFM+ IKDAGVRGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGFVYLVSSVGVTGTRTSVSGRVQ 240
           ETEILRKEAVK++IELVLLTTPTTP+DRMK I EASEGFVYLVSSVGVTG R SVS +VQ
Sbjct: 181 ETEILRKEAVKHSIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIIIGSAMVKLLGEAQSPEEGLKEL 300
           TLLEE+KEVT+KPVAVGFGISKPEHVKQV+ WGADGII+GSAMVKLLGEAQSPEEGLK L
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ENFTISLKSAL 312
           ENFT SL SAL
Sbjct: 301 ENFTKSLTSAL 311

[Close]
BLAST of Cla017172 vs. NCBI nr
Match: gi|659096914|ref|XP_008449353.1| (PREDICTED: tryptophan synthase alpha chain-like isoform X2 [Cucumis melo])

HSP 1 Score: 467.2 bits (1201), Expect = 2.2e-128
Identity = 242/273 (88.64%), Postives = 257/273 (94.14%), Query Frame = 1 

Query: 40  MAALAASPAVGLSETFNKLREQGKVALIPYITAGDPDLSTTAEALKVLSTCGSDIIELGV 99
           MA+L AS AVGLSETF+KL+EQGKVA IPYITAGDPDLSTTAEALKVLST GSDIIELGV
Sbjct: 1   MASLTASSAVGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGV 60

Query: 100 PYSDPLADGPVIQAAATRSLARETNFNAIISMLKGVIPELSCPISLFTYYNPILKRGIEN 159
           PYSDPLADGPVIQAAATRSLAR TNF+AIISMLK VIPELSCPI+LF+YYNPILKRGI N
Sbjct: 61  PYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGN 120

Query: 160 FMMIIKDAGVRGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKNIAEASEGF 219
           FM+ IKDAGV+GLVVPDVPLEETEILRKEAVK+NIELVLLTTPTTP+DRMK I EASEGF
Sbjct: 121 FMLTIKDAGVQGLVVPDVPLEETEILRKEAVKHNIELVLLTTPTTPRDRMKAIVEASEGF 180

Query: 220 VYLVSSVGVTGTRTSVSGRVQTLLEEVKEVTKKPVAVGFGISKPEHVKQVADWGADGIII 279
           VYLVSSVGVTG R SVS +VQTLLEE+KEVT+KPVAVGFGISKPEHVKQV+ WGADGII+
Sbjct: 181 VYLVSSVGVTGARASVSNKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIV 240

Query: 280 GSAMVKLLGEAQSPEEGLKELENFTISLKSALS 313
           GSAMVKLLGEAQSPEEGLK LENFT SLKSALS
Sbjct: 241 GSAMVKLLGEAQSPEEGLKALENFTKSLKSALS 273

The following BLAST results are available for this feature:
BLAST of Cla017172 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRPA2_ARATH1.3e-11770.83Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana GN=TSA1 P... [more]
TRPA1_ARATH2.3e-11779.32Tryptophan synthase alpha chain OS=Arabidopsis thaliana GN=TRPA1 PE=1 SV=2[more]
TRPA_MAIZE3.5e-8655.41Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2[more]
TRPA_CYAP48.4e-8056.44Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141)... [more]
TRPA_ACAM11.9e-7956.70Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) GN=t... [more]
BLAST of Cla017172 vs. TrEMBL
Match NameE-valueIdentityDescription
V4TUM1_9ROSI9.3e-12680.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021275mg PE=3 SV=1[more]
A0A067FZB6_CITSI2.7e-12579.72Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021527mg PE=3 SV=1[more]
A0A0K9QXB7_SPIOL5.1e-12476.04Uncharacterized protein OS=Spinacia oleracea GN=SOVF_137970 PE=3 SV=1[more]
A0A0J8CDG2_BETVU3.6e-12273.57Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120250 PE=3 S... [more]
B9S4R8_RICCO5.3e-12173.72Trytophan synthase alpha subunit, putative OS=Ricinus communis GN=RCOM_0991580 P... [more]
BLAST of Cla017172 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659130730|ref|XP_008465320.1|7.7e-15893.27PREDICTED: tryptophan synthase alpha chain-like [Cucumis melo][more]
gi|449446897|ref|XP_004141207.1|4.2e-15692.95PREDICTED: tryptophan synthase alpha chain [Cucumis sativus][more]
gi|659096912|ref|XP_008449352.1|1.1e-14084.62PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo][more]
gi|449455268|ref|XP_004145375.1|5.6e-14084.57PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis sativus][more]
gi|659096914|ref|XP_008449353.1|2.2e-12888.64PREDICTED: tryptophan synthase alpha chain-like isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002028Trp_synthase_suA
IPR011060RibuloseP-bd_barrel
IPR013785Aldolase_TIM
IPR018204Trp_synthase_alpha_AS
Vocabulary: Molecular Function
TermDefinition
GO:0004834tryptophan synthase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006568tryptophan metabolic process
GO:0008152metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0006568 tryptophan metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0004834 tryptophan synthase activity
molecular_function GO:0003824 catalytic activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU56470watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla017172Cla017172.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU56470WMU56470transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002028Tryptophan synthase, alpha chainHAMAPMF_00131Trp_synth_alphacoord: 61..310
score: 35
IPR002028Tryptophan synthase, alpha chainPFAMPF00290Trp_syntAcoord: 55..309
score: 4.2
IPR002028Tryptophan synthase, alpha chainTIGRFAMsTIGR00262TIGR00262coord: 55..308
score: 3.5
IPR011060Ribulose-phosphate binding barrelunknownSSF51366Ribulose-phoshate binding barrelcoord: 51..292
score: 1.13
IPR013785Aldolase-type TIM barrelGENE3DG3DSA:3.20.20.70coord: 51..311
score: 2.5E
IPR018204Tryptophan synthase, alpha chain, active sitePROSITEPS00167TRP_SYNTHASE_ALPHAcoord: 95..108
scor
NoneNo IPR availablePANTHERPTHR10314SER/THR DEHYDRATASE, TRP SYNTHASEcoord: 121..199
score: 2.2E-54coord: 58..98
score: 2.2
NoneNo IPR availablePANTHERPTHR10314:SF88TRYPTOPHAN SYNTHASE ALPHA CHAIN-RELATEDcoord: 121..199
score: 2.2E-54coord: 58..98
score: 2.2