Cla015780 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACTTTATCTTGGTCTTCTCTTCTTTCTGGTTTCTTCTGCCGCTGCTACTACTTGTGATCGTTGTGTTCATCAATCCAAAGTTGCTTATTACTACGATGATACGCCTATTTCACGTAAACATTTTATATTTTTATTGCCATTTTTTTTTTCTTCCACTGTCAAATTAAGACCTTGATGGAATTTGTGTCATCCAAAAAAATGTTTAAAATAGAATGTGACATATTTGATAACTATTTAATTTTACATTTTTAATTTTTTAAAAAATTCCACTTGTATTATTCTTACAACTTTTTTATATGATTTTCATATTTTTTAATGATAGGTTTGAATTCTTAACTAAATTTTAAAACCCAAAAACAAACTTTTAAAGACTTTTTTTTCTTAAACCTGACTTTTTTTTTAAAAAAAAAATTTCTAAAAAGTAAATAAATAAAAGGAAAATCACCTTTTTAGTTCCCAAATTTTGAAAAATTCGTGTGTTTGGTCACTAAATTTTCAAAACATATCTTCTTTGTCTCCAAATTTTCAAGAATAGGTGAATTATGGTCCTTAAGTTTTTAAATTGTATCTTTTTCGTCCCTGAATTATTAAAAATTAGGTTTAAAAGGTCTTGCAGTATTTTTTTTTCTTATTTCTAAATTAGAAAAATAATTTTTTAAAAAATACCTCCCTTTCTAAAATTAAACTTATTTTTTAGTTCAAAATTCATATAATTATACAAAATAATAATAGTAAATAGACTTTTTAAACATATTTATAAAAATTTACATTTTGAAAACTCATGAACCGAATGCACATACCTATTCTAAAAAACTCAGGGACGAAAAAAATATGTTTAGAAAACTCATGAACCAAACAAACCTATTTTTTTAAACTTGGAGACTAATAAAGTAATTTTTCGAAAAAATTGATAAGTGAAATTTTAAAAATAAAAAATAAGAAATCACACATTGATCAAATGGTCTTATTGATTTAATATATAATGCAGATGGGGCATGTGGATATGGGCCTTTGGCATTTGAATTATCCAATGGATATGTTGCTGCTGTTGTCCCTTCCCTTTACAAACAGGGAGCTGGATGTGGTGCCTGTTTCCAGGTCAAATATTTTCCACTTTATTTATTTGTTATTATTTTTTTATTATTTTTATTTTTTAATCTTATGATCACTTCAACTTGTTTTCAAATATAATAAAATGAGGCAACTTATTTGCAAATATAACAAAATATACTAATAGATGGTCATAGACACCGTAGACTACTAGCTATCATCTATTCAAATATTTTTAGTAGTTTTATTATTTAAAATAATTACCCTTTAATTTATTTATTAAATATAATAAGTTTTTTTTTTCTTTTTTTTTGGTAAAGGTAAGGTGTAAGGATAAGAGATTTTGCAGCAGTGTTGGAACTAAAGTGGTTGCAACAGATCAAAATTATGATAACAGATATGACTTTGTTCTCAGCAAAAAAGCATACTCTTCAATGGCTTTAAAGAACAAGACTAAACAACTTGTCAATCTTGGGACTGTTGATGTGGAATATAAGAGGTGATAATGCATTAACATTATATATTATTGCTTTATTATTCATTTCATTCTAAACCAAGTTAAGTTTTGATCAAAACTAAAAAAAAAAAAAAAAGAAAAAAAAGTGATTTTGTCATTATAATTTGACTATTTTAAATTCAAGTATTTCTCGAGAGGGAAACAAACATAAAGCTCAAAAATATAAAACTCAAAAAATGAAATTGTTATCGAATGAAGCCATAAAATTATATTATGAAAGAAGTAACTAATGTATCTTTATGAAGTGTTGTTATCTTTTTGATAATATGAGATCCTCAACATGCCCTTTGAATGGTAGATCTTTGGACCATTCACCATATTCTTGAGTCGGATCCAAATTTTTAAAACCGAATACCCATATGTTGGCGTTTATAAATTTTGATACCATATTAGATAAATATGAGATCCTATCTCAAAACGAATTCACAATCGGAGGAGTAACTCATGTATCTTAATATTGTGAGCTCTTTTCATCTTGCCATGTGAGATTATTTGATTCTCCTACCCCACGTATTGTCAAAAAAAAAAAAAAATTGATTTTGGCTTCCACATAAAAATATAAACTAATTTTGGTGAGTTTGATGTTGCATGAAGGATACCTTGTACATACAGAAACAAGAATTTGTTGGTGAGAGTGGAAGAATGGAGCCAAAAGCCATACTATTTGGCCCTTAAATTCCTTTACCAAGGTGGGCAGACAGAAATAACAAGAGTTGAAATAGCTGAAGTAAGTTGAAAAAACTCAACACACAAAAGCAATAAAAGCTTAATTGATCGTAAAACTCAATAAGTGTTTGAAATGAAATAATTGAGATTTGTTTTTCATGAATTTTTTGTAGGTTGGTTCAGATGATTGGGAAAGCATGAAGAGAAATTATGGAGCAATTTGGGATGTAAACAAACAACTTGAGGGAGCATTGCAATTGAAGATAGTTGTAACTTCAGAGAACAATAAAAATGAGAATCTATATTGGGCAAGTAATGATCTTCCTGAGGATTGGCAAAATGGAGAGATTTATGATACTGGAATTCAAATTAATAACATTGCTAAAGAAACATGCCCAAGAAATCAGTGTGGTGATTTTCCATGGAAGTAA ATGGCACTTTATCTTGGTCTTCTCTTCTTTCTGGTTTCTTCTGCCGCTGCTACTACTTGTGATCGTTGTGTTCATCAATCCAAAGTTGCTTATTACTACGATGATACGCCTATTTCACATGGGGCATGTGGATATGGGCCTTTGGCATTTGAATTATCCAATGGATATGTTGCTGCTGTTGTCCCTTCCCTTTACAAACAGGGAGCTGGATGTGGTGCCTGTTTCCAGGTAAGGTGTAAGGATAAGAGATTTTGCAGCAGTGTTGGAACTAAAGTGGTTGCAACAGATCAAAATTATGATAACAGATATGACTTTGTTCTCAGCAAAAAAGCATACTCTTCAATGGCTTTAAAGAACAAGACTAAACAACTTGTCAATCTTGGGACTGTTGATGTGGAATATAAGAGAAACAAGAATTTGTTGGTGAGAGTGGAAGAATGGAGCCAAAAGCCATACTATTTGGCCCTTAAATTCCTTTACCAAGGTGGGCAGACAGAAATAACAAGAGTTGAAATAGCTGAAGTTGGTTCAGATGATTGGGAAAGCATGAAGAGAAATTATGGAGCAATTTGGGATGTAAACAAACAACTTGAGGGAGCATTGCAATTGAAGATAGTTGTAACTTCAGAGAACAATAAAAATGAGAATCTATATTGGGCAAGTAATGATCTTCCTGAGGATTGGCAAAATGGAGAGATTTATGATACTGGAATTCAAATTAATAACATTGCTAAAGAAACATGCCCAAGAAATCAGTGTGGTGATTTTCCATGGAAGTAA ATGGCACTTTATCTTGGTCTTCTCTTCTTTCTGGTTTCTTCTGCCGCTGCTACTACTTGTGATCGTTGTGTTCATCAATCCAAAGTTGCTTATTACTACGATGATACGCCTATTTCACATGGGGCATGTGGATATGGGCCTTTGGCATTTGAATTATCCAATGGATATGTTGCTGCTGTTGTCCCTTCCCTTTACAAACAGGGAGCTGGATGTGGTGCCTGTTTCCAGGTAAGGTGTAAGGATAAGAGATTTTGCAGCAGTGTTGGAACTAAAGTGGTTGCAACAGATCAAAATTATGATAACAGATATGACTTTGTTCTCAGCAAAAAAGCATACTCTTCAATGGCTTTAAAGAACAAGACTAAACAACTTGTCAATCTTGGGACTGTTGATGTGGAATATAAGAGAAACAAGAATTTGTTGGTGAGAGTGGAAGAATGGAGCCAAAAGCCATACTATTTGGCCCTTAAATTCCTTTACCAAGGTGGGCAGACAGAAATAACAAGAGTTGAAATAGCTGAAGTTGGTTCAGATGATTGGGAAAGCATGAAGAGAAATTATGGAGCAATTTGGGATGTAAACAAACAACTTGAGGGAGCATTGCAATTGAAGATAGTTGTAACTTCAGAGAACAATAAAAATGAGAATCTATATTGGGCAAGTAATGATCTTCCTGAGGATTGGCAAAATGGAGAGATTTATGATACTGGAATTCAAATTAATAACATTGCTAAAGAAACATGCCCAAGAAATCAGTGTGGTGATTTTCCATGGAAGTAA MALYLGLLFFLVSSAAATTCDRCVHQSKVAYYYDDTPISHGACGYGPLAFELSNGYVAAVVPSLYKQGAGCGACFQVRCKDKRFCSSVGTKVVATDQNYDNRYDFVLSKKAYSSMALKNKTKQLVNLGTVDVEYKRNKNLLVRVEEWSQKPYYLALKFLYQGGQTEITRVEIAEVGSDDWESMKRNYGAIWDVNKQLEGALQLKIVVTSENNKNENLYWASNDLPEDWQNGEIYDTGIQINNIAKETCPRNQCGDFPWK
BLAST of Cla015780 vs. Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 5.4e-64 Identity = 126/260 (48.46%), Postives = 168/260 (64.62%), Query Frame = 1
BLAST of Cla015780 vs. Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.0e-62 Identity = 121/255 (47.45%), Postives = 170/255 (66.67%), Query Frame = 1
BLAST of Cla015780 vs. Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 5.0e-62 Identity = 122/265 (46.04%), Postives = 166/265 (62.64%), Query Frame = 1
BLAST of Cla015780 vs. Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 9.2e-56 Identity = 115/266 (43.23%), Postives = 159/266 (59.77%), Query Frame = 1
BLAST of Cla015780 vs. Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 3.5e-55 Identity = 116/265 (43.77%), Postives = 157/265 (59.25%), Query Frame = 1
BLAST of Cla015780 vs. TrEMBL
Match: A0A0A0K4T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019330 PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 4.7e-83 Identity = 173/265 (65.28%), Postives = 188/265 (70.94%), Query Frame = 1
BLAST of Cla015780 vs. TrEMBL
Match: V4SA67_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029088mg PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 8.6e-77 Identity = 144/265 (54.34%), Postives = 188/265 (70.94%), Query Frame = 1
BLAST of Cla015780 vs. TrEMBL
Match: A0A067FLN8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024895mg PE=3 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.1e-76 Identity = 144/265 (54.34%), Postives = 188/265 (70.94%), Query Frame = 1
BLAST of Cla015780 vs. TrEMBL
Match: A0A0D2NI99_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G257500 PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 8.1e-75 Identity = 147/261 (56.32%), Postives = 186/261 (71.26%), Query Frame = 1
BLAST of Cla015780 vs. TrEMBL
Match: A0A0B0P1I4_GOSAR (Expansin-like A1 OS=Gossypium arboreum GN=F383_05840 PE=3 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 5.2e-74 Identity = 145/261 (55.56%), Postives = 183/261 (70.11%), Query Frame = 1
BLAST of Cla015780 vs. NCBI nr
Match: gi|449454265|ref|XP_004144876.1| (PREDICTED: expansin-like A2 [Cucumis sativus]) HSP 1 Score: 484.2 bits (1245), Expect = 1.4e-133 Identity = 235/266 (88.35%), Postives = 245/266 (92.11%), Query Frame = 1
BLAST of Cla015780 vs. NCBI nr
Match: gi|659094118|ref|XP_008447893.1| (PREDICTED: expansin-like A2 [Cucumis melo]) HSP 1 Score: 478.8 bits (1231), Expect = 6.0e-132 Identity = 231/268 (86.19%), Postives = 245/268 (91.42%), Query Frame = 1
BLAST of Cla015780 vs. NCBI nr
Match: gi|659094529|ref|XP_008448110.1| (PREDICTED: expansin-like A1 [Cucumis melo]) HSP 1 Score: 346.7 bits (888), Expect = 3.6e-92 Identity = 163/256 (63.67%), Postives = 193/256 (75.39%), Query Frame = 1
BLAST of Cla015780 vs. NCBI nr
Match: gi|659094108|ref|XP_008447888.1| (PREDICTED: expansin-like A3 isoform X3 [Cucumis melo]) HSP 1 Score: 336.7 bits (862), Expect = 3.7e-89 Identity = 167/266 (62.78%), Postives = 200/266 (75.19%), Query Frame = 1
BLAST of Cla015780 vs. NCBI nr
Match: gi|449454380|ref|XP_004144933.1| (PREDICTED: expansin-like A1 [Cucumis sativus]) HSP 1 Score: 336.3 bits (861), Expect = 4.8e-89 Identity = 170/269 (63.20%), Postives = 200/269 (74.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|