Cla015662 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCAATGTTAGCAATCCAATTCTCATAGACCAAGAGTATTGCCCATGGAATCAGTGCAATCGCAAGGTATTGATCACATTCCAAAAACTTTGATTTCAAAATTCTTCATGTCAATTTCACAAATAAACTTTAATTTTGTTTTTTATTTTTCAGGTTCCATCGAAGATTAAGATTAGTAAAGTGAGTTTCAAGAACATTAGAGGAAGTTCCGCAACTCCAATGGCAGTCAAACTTATTTGTAGTAGCAACCTGCCATGTGACGAAGTAAAAGTAGCCAACATTGACCTCGTTTACAATGGAATAGAGGGTTCTATTACATCTCAATGTATGAATGTGAAACCCATCATTTCAGGGATACAAAATCCTCAAATGTGCTCTTCCCCTTAA ATGGTCAATGTTAGCAATCCAATTCTCATAGACCAAGAGTATTGCCCATGGAATCAGTGCAATCGCAAGGTTCCATCGAAGATTAAGATTAGTAAAGTGAGTTTCAAGAACATTAGAGGAAGTTCCGCAACTCCAATGGCAGTCAAACTTATTTGTAGTAGCAACCTGCCATGTGACGAAGTAAAAGTAGCCAACATTGACCTCGTTTACAATGGAATAGAGGGTTCTATTACATCTCAATGTATGAATGTGAAACCCATCATTTCAGGGATACAAAATCCTCAAATGTGCTCTTCCCCTTAA ATGGTCAATGTTAGCAATCCAATTCTCATAGACCAAGAGTATTGCCCATGGAATCAGTGCAATCGCAAGGTTCCATCGAAGATTAAGATTAGTAAAGTGAGTTTCAAGAACATTAGAGGAAGTTCCGCAACTCCAATGGCAGTCAAACTTATTTGTAGTAGCAACCTGCCATGTGACGAAGTAAAAGTAGCCAACATTGACCTCGTTTACAATGGAATAGAGGGTTCTATTACATCTCAATGTATGAATGTGAAACCCATCATTTCAGGGATACAAAATCCTCAAATGTGCTCTTCCCCTTAA MVNVSNPILIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGSSATPMAVKLICSSNLPCDEVKVANIDLVYNGIEGSITSQCMNVKPIISGIQNPQMCSSP
BLAST of Cla015662 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-29 Identity = 60/100 (60.00%), Postives = 75/100 (75.00%), Query Frame = 1
BLAST of Cla015662 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 6.3e-29 Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 1
BLAST of Cla015662 vs. Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.0e-27 Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 1
BLAST of Cla015662 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.7e-26 Identity = 51/97 (52.58%), Postives = 74/97 (76.29%), Query Frame = 1
BLAST of Cla015662 vs. Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.3e-26 Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = 1
BLAST of Cla015662 vs. TrEMBL
Match: A0A0A0K3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 1.2e-45 Identity = 89/99 (89.90%), Postives = 97/99 (97.98%), Query Frame = 1
BLAST of Cla015662 vs. TrEMBL
Match: E3VSV7_CUCPE (Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 2.4e-35 Identity = 70/100 (70.00%), Postives = 85/100 (85.00%), Query Frame = 1
BLAST of Cla015662 vs. TrEMBL
Match: A0A0D2NBK5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G193800 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 6.0e-34 Identity = 68/99 (68.69%), Postives = 82/99 (82.83%), Query Frame = 1
BLAST of Cla015662 vs. TrEMBL
Match: W9SBW1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020040 PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 8.6e-33 Identity = 67/99 (67.68%), Postives = 79/99 (79.80%), Query Frame = 1
BLAST of Cla015662 vs. TrEMBL
Match: Q9MBB7_SALGI (Polygalacturonase OS=Salix gilgiana GN=SgPG4 PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 2.8e-31 Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = 1
BLAST of Cla015662 vs. NCBI nr
Match: gi|659111053|ref|XP_008455553.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo]) HSP 1 Score: 191.0 bits (484), Expect = 9.7e-46 Identity = 89/99 (89.90%), Postives = 97/99 (97.98%), Query Frame = 1
BLAST of Cla015662 vs. NCBI nr
Match: gi|778730103|ref|XP_011659699.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 1.7e-45 Identity = 89/99 (89.90%), Postives = 97/99 (97.98%), Query Frame = 1
BLAST of Cla015662 vs. NCBI nr
Match: gi|700188231|gb|KGN43464.1| (hypothetical protein Csa_7G037910 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 1.7e-45 Identity = 89/99 (89.90%), Postives = 97/99 (97.98%), Query Frame = 1
BLAST of Cla015662 vs. NCBI nr
Match: gi|659067859|ref|XP_008441641.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo]) HSP 1 Score: 169.1 bits (427), Expect = 4.0e-39 Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = 1
BLAST of Cla015662 vs. NCBI nr
Match: gi|659097569|ref|XP_008449697.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo]) HSP 1 Score: 168.3 bits (425), Expect = 6.8e-39 Identity = 77/100 (77.00%), Postives = 89/100 (89.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |