Cla015626 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla015626
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Knotted-1-like homeobox protein H1 (AHRD V1 ***- Q8GUS6_TOBAC); contains Interpro domain(s) IPR005541 KNOX2
Location	Chr2 : 2135292 .. 2139207 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGGAGGATCCAGTGGAAGCAGCTGTTCATTCATGGCTACTTGTAACAGCACCAACAACAATAATACTAACACACCCATGATGATGATGATCAATAGTACTAATAATCCTCAAACGTTGGACAACAATAACAACAACAACAACAACAACAAGATGTTCTTGCCTTTGTCTTGGTCTTCTACTTCTTCCAACAATAATGCTCAAACTCAAAGGGTTTCTGCTTTTGTTCCTCAATCTAATACCAATAATAATGATCTTCTTACCACTTCCACTTCCAAAGCTAAAATTATGGCTCATCCTCTCTTCCCTCGCCTCCTCGCTGCCTACGTCAACTGCCAAAAGGTTCGTAATTAAATTTACCCTAATTCATCGCCTTCATTTAAAAAAAAAAAAAATTAAAGAGTTATCTTTTCTTATTTCTTTGTCATTTTTGGTATGGTTAGTCAATACAACTGTCAATAATTAATAGTAACTCTTAAGCTTTTGGGTTGGTAACTTTTTCTCTTTTAGGTCTTCTTTTGATTTCCCCTAATTTAAAGTGAAAAAAAAAAATGTAAGAAGATGAAGTATAGAAAGTAAATTTTTTTTTCTCTCTTATTCTAACCTATTTGTTGTTATTTCTTCTTGAGTACTATATATTAGGTCTTTTTTTTTTTCTAATTTCCAGTAATTTAAAATCAAATAAGGAATTTAGGAAGATGAGTAAAGAAAGTAAATTTGGTGGTAGATTTCTTTTTCTTATTCTAACCTATTTGTTGTTATTTTTTCCTTCTTGATTATCATTTATCAGGTCTTCCTTTAATTTCTCATAATCTAAAATAAAAATAAGTGGAGGCTTATTTTTTTTTAATTTTTTTTTAAAGATGAGTAAAAAAAAAAAAAATATCATCACTTGTTAGCTTAAACTTTTGGTCGACCGATTTGTATGACCATAATTTCATGTGGGTGTGGGTGGAAAAATGTTGTTGGTCCAGGTGGGTGCGCCGCCGGAAGTGGTGGCGAGGCTAGAGCAGGCGTGTGCCGTGGCGACGGGAAGCTGTAGGGCGGCGGGACGTGGGGATGATCCAGCGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGACCAAATATGAACAAGAGTTGACCAAACCTTTTAAAGAAGCAATGCTCTTCTTCTCAAGAATTGAGTCTCAGCTGAAAACCCTAGCAGTTTCTTCTGATGGTCACTCTCTTTCTCTCTATTATTATTATTCTAGAAATCTCATAGTTTAATTTTATATAATTATTATTATATTATATGATATATTGTCCTTTTGCCCTTCTATTAGATTTAGCTGATGGTTTTGGCCTCTGATGTGTCCTTTTTATTCATGTTTTAATTGCACATCAAATCAAAGTTCAGAAACGAGTACTGATCACAAAAGCTTGAATCCAAAAGGAGATTAAGACAAGGATTTTTTTTTTTTTGGGGGGTAATTTTTTTAATGTTGTGCTTGAGTCCATAATTGGATGTGTTGAGGGTTGCTCAAAGCTTATGAAAAACTAAACCTGCATTGTAGGTTAATTAATGCTTAATTTGTTTGTGTGTGATCAATAATAGGGTAGAATTGAAGCCTTTCAAGTTGGTTTTGGTTTTTCTTCATTTGAGGGAAATGATTGGCTAGCTACAATAGAGAAGTGTTCTCTAATTATGTGTCCTTATGATTTGGTGAGTTTAAATTTTTTCAGCAATATAAATGTGTGGGAAGCAGGGATTTGAATCTCCCACCTTAACAGAATGAGTAGATCTATGGGTTAGATAGTTTGATAATGATCTGTTAGCTTTTGAAATTTGTGTTTGCTTTCTCTCAACTTTTTTACAATAATTTTCATTCTTCTTAAGAATAGATTTGAATTCAATCGAAACAAAATTTTTTAAACTAAAAAAGAAACAAGTTTTTGAAAACTACTTTTTTAACTTTGAAACCTTGGTTTGAATTTTGAAAACATTTGTAAAAGGTAGATAACTAAGAAAGCAACTCATAGTTGGAAGTAACACTTGCAAGCTTAATTTTTTATAAGGTCCGGTTCACGATTTTGTTTTTAGTTTTTAATTTTTCAGATTTTTTGAGTAACTCATAGGTGGAAGTGATGCTTACAAGCTTAGTTTTTTATAAGGTCTAGTTCCATGACGATTTTGTTTTTTTTATTTTCAAATTTTCAAATTTATGCCCGTTTCCTTTAAATTTTCTTACCATAGTTTTCATATTATTGTTAAAAAATATTTGGATTCTTAGTCAGATTCTAAAAACAAAAACAAGTTCCAGTTAGTACTTTTAGTTTCCAAAACTTGATCTACCTCAATACATTGATAGAAAGTGAGTAACGGAATGAAGAAACTTAACAGCGGGAATGTTGTTTATTGACATAAACTTTTAAAATCAAATGGTTATTAAACTAGATTTGAAAAGTTATAAAATAGAGTCTTTTAACTGTTAAGAGCTATATCTACGCTGACACTAATTAGAGTGTTGTGTAAGTGTAAAGTTTTATAATTTTATAGGTTTGGATCTTTTCTACTTTGCTTATGCAGTACTATTTTATTAAATAATAATAATAATAGTATTTGTTAAGTGAGTTACTGCTTTCTACTACTACACATTTGTTGTGGGATCTTTTTGTGAACAATTTCTCTGAAATGATAAGATGGGATTTTCAGAAGAAATGTGTTTATTAAAGATAGATTTGTGTTGAGTTGAAAGAACAATTTATTTAGGAACTTATGTTAGAATGACTATATTAAGGAGAATTTATTAAAAAATGTGACTGCCATTCAAATAACAGCCATGTCATAGAAATTGAATTTTTTTTTTTTTTTTGATAAATAAAAATCATACATGGAATATGGTTGATCACTTTTGACCTATTTCTTGTTCATTATCTACTAATTTCACCATTGAAAGTTCAAATCTTGACTCATTAGATGCTGTCTTTAGCTTGGTTTCAAGCTTTATAAAGTGAAAGGAGAATGATTTCTCTTTTAAAATGATTATTCATTTTGAATATAAATTCTCCCATGAAGAAAGTTTTAAACTTATGATGTGACTCAATTTTTATTGGTTTAGTTAATATTATATTTAATAGTCAATAAATTTTCTCTACAACATTAATAATCAATAAAATTAGGTCAGCTAATTTACTAATTTTGTCATGTTGAAACATTAATTGTTAGGTTAGGGCACACATGGATTAGTTAACTTAAATAATACTTCAATTTCTTGCGATGGCTGGACTGTGTTCAAATGTGTGTAATGTTGTTTCTTCTTGCATGAGGCATAAGTATTTAGGTGTTAAGAATATGAATGGTTGTGTTAGGTTTCGAGTTGGTTGGGCAAAACGAGTGCTCGAAGGAGATTGAGGTGGATATGAACGAAAACTACATAGACCCTCAAGCCGAAGAGAAGGAACTCAAAGGCCAACTTCTACGCAAATACAGCGGATATCTTGGGAGCCTAAAACAAGAGTTTTTGAAGAAGAAAAAGAATGGGAAGTTGCCAAAAGAAGCTAGACAACAATTGCTCGACTGGTGGAGTCGACACTACAAATGGCCATATCCCTCGGTATCTCATACTTTAATGAAACGACTACATGCATTAGAATTATATGTATACATAGTTGTTTACTAGGAACTCTTGTTAACTTTCTCGTGTGGTTGGCACATATCGTTTGCGAATCGAGTGCAGGAGTCGCAAAAGGTGGCGTTGGCGGAGTCGACGGGGCTAGACTTGAAGCAGATCAATAATTGGTTTATTAACCAAAGAAAGCGCCATTGGAAGCCATCAGAGGATATGCAGTTTGTGGTGATGGATGCTGCTCATCCACATTACTATTTGGACAATGTCATATGCAATCCTTTCTCTATGGATTGTTCTTCTACTCTTTTCTGA

mRNA sequence

ATGGAAGGAGGAGGATCCAGTGGAAGCAGCTGTTCATTCATGGCTACTTGTAACAGCACCAACAACAATAATACTAACACACCCATGATGATGATGATCAATAGTACTAATAATCCTCAAACGTTGGACAACAATAACAACAACAACAACAACAACAAGATGTTCTTGCCTTTGTCTTGGTCTTCTACTTCTTCCAACAATAATGCTCAAACTCAAAGGGTTTCTGCTTTTGTTCCTCAATCTAATACCAATAATAATGATCTTCTTACCACTTCCACTTCCAAAGCTAAAATTATGGCTCATCCTCTCTTCCCTCGCCTCCTCGCTGCCTACGTCAACTGCCAAAAGGTGGGTGCGCCGCCGGAAGTGGTGGCGAGGCTAGAGCAGGCGTGTGCCGTGGCGACGGGAAGCTGTAGGGCGGCGGGACGTGGGGATGATCCAGCGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGACCAAATATGAACAAGAGTTGACCAAACCTTTTAAAGAAGCAATGCTCTTCTTCTCAAGAATTGAGTCTCAGCTGAAAACCCTAGCAGTTTCTTCTGATGGTTTCGAGTTGGTTGGGCAAAACGAGTGCTCGAAGGAGATTGAGGTGGATATGAACGAAAACTACATAGACCCTCAAGCCGAAGAGAAGGAACTCAAAGGCCAACTTCTACGCAAATACAGCGGATATCTTGGGAGCCTAAAACAAGAGTTTTTGAAGAAGAAAAAGAATGGGAAGTTGCCAAAAGAAGCTAGACAACAATTGCTCGACTGGTGGAGTCGACACTACAAATGGCCATATCCCTCGGAGTCGCAAAAGGTGGCGTTGGCGGAGTCGACGGGGCTAGACTTGAAGCAGATCAATAATTGGTTTATTAACCAAAGAAAGCGCCATTGGAAGCCATCAGAGGATATGCAGTTTGTGGTGATGGATGCTGCTCATCCACATTACTATTTGGACAATGTCATATGCAATCCTTTCTCTATGGATTGTTCTTCTACTCTTTTCTGA

Coding sequence (CDS)

ATGGAAGGAGGAGGATCCAGTGGAAGCAGCTGTTCATTCATGGCTACTTGTAACAGCACCAACAACAATAATACTAACACACCCATGATGATGATGATCAATAGTACTAATAATCCTCAAACGTTGGACAACAATAACAACAACAACAACAACAACAAGATGTTCTTGCCTTTGTCTTGGTCTTCTACTTCTTCCAACAATAATGCTCAAACTCAAAGGGTTTCTGCTTTTGTTCCTCAATCTAATACCAATAATAATGATCTTCTTACCACTTCCACTTCCAAAGCTAAAATTATGGCTCATCCTCTCTTCCCTCGCCTCCTCGCTGCCTACGTCAACTGCCAAAAGGTGGGTGCGCCGCCGGAAGTGGTGGCGAGGCTAGAGCAGGCGTGTGCCGTGGCGACGGGAAGCTGTAGGGCGGCGGGACGTGGGGATGATCCAGCGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGACCAAATATGAACAAGAGTTGACCAAACCTTTTAAAGAAGCAATGCTCTTCTTCTCAAGAATTGAGTCTCAGCTGAAAACCCTAGCAGTTTCTTCTGATGGTTTCGAGTTGGTTGGGCAAAACGAGTGCTCGAAGGAGATTGAGGTGGATATGAACGAAAACTACATAGACCCTCAAGCCGAAGAGAAGGAACTCAAAGGCCAACTTCTACGCAAATACAGCGGATATCTTGGGAGCCTAAAACAAGAGTTTTTGAAGAAGAAAAAGAATGGGAAGTTGCCAAAAGAAGCTAGACAACAATTGCTCGACTGGTGGAGTCGACACTACAAATGGCCATATCCCTCGGAGTCGCAAAAGGTGGCGTTGGCGGAGTCGACGGGGCTAGACTTGAAGCAGATCAATAATTGGTTTATTAACCAAAGAAAGCGCCATTGGAAGCCATCAGAGGATATGCAGTTTGTGGTGATGGATGCTGCTCATCCACATTACTATTTGGACAATGTCATATGCAATCCTTTCTCTATGGATTGTTCTTCTACTCTTTTCTGA

Protein sequence

MEGGGSSGSSCSFMATCNSTNNNNTNTPMMMMINSTNNPQTLDNNNNNNNNNKMFLPLSWSSTSSNNNAQTQRVSAFVPQSNTNNNDLLTTSTSKAKIMAHPLFPRLLAAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGRGDDPALDQFMEAYCEMLTKYEQELTKPFKEAMLFFSRIESQLKTLAVSSDGFELVGQNECSKEIEVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSSTLF

Homology

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BLAST of Cla015626 vs. Swiss-Prot
Match: HSBH1_SOYBN (Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.4e-112
Identity = 216/341 (63.34%), Postives = 251/341 (73.61%), Query Frame = 1


Query: 9   SSCSFMATCNSTNNNNTNTPMMMMINSTNNPQTLDNNNNNNNNNKMFLPLSWSSTSSNNN 68
           ++C F+  C+    N+T TP +M+ N+ NN +T D++NNNN        L +    S+++
Sbjct: 54  TNCLFIPNCS----NSTGTPSIMLHNNHNNNKTDDDDNNNNTG------LGYYFMESDHH 113

Query: 69  AQTQRVSAFVPQSNTNNNDLLTTSTS---KAKIMAHPLFPRLLAAYVNCQKVGAPPEVVA 128
                        N NNN   ++S+S   KAKIMAHP + RLLAAYVNCQKVGAPPEVVA
Sbjct: 114 HHHH--------GNNNNNGSSSSSSSSAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVA 173

Query: 129 RLEQACAVAT---GSCRAAGR---GDDPALDQFMEAYCEMLTKYEQELTKPFKEAMLFFS 188
           RLE+ACA A    G   AAG    G+DPALDQFMEAYCEMLTKYEQEL+KP KEAMLF  
Sbjct: 174 RLEEACASAATMAGGDAAAGSSCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQ 233

Query: 189 RIESQLKTLAVSSDGFELV--GQNECSKEIEVDMNENYIDPQAEEKELKGQLLRKYSGYL 248
           RIE Q K L +SS  F     G    S E +VD++ N IDPQAE+++LKGQLLRKYSGYL
Sbjct: 234 RIECQFKNLTISSSDFASNEGGDRNGSSEEDVDLH-NMIDPQAEDRDLKGQLLRKYSGYL 293

Query: 249 GSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWF 308
           GSLKQEF+KK+K GKLPKEARQQLL+WW+RHYKWPYPSESQK+ALAESTGLD KQINNWF
Sbjct: 294 GSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWF 353

Query: 309 INQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCS 339
           INQRKRHWKPSEDMQFVVMD +HPHYY+DNV+ NPF MD S
Sbjct: 354 INQRKRHWKPSEDMQFVVMDPSHPHYYMDNVLGNPFPMDLS 375

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BLAST of Cla015626 vs. Swiss-Prot
Match: LET6_SOLLC (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum GN=LET6 PE=2 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-112
Identity = 220/372 (59.14%), Postives = 261/372 (70.16%), Query Frame = 1


Query: 1   MEGG--GSSGSSCSFMATCNSTNNNNTNT----------------PMMMMINSTNNPQTL 60
           MEGG  G++ +SC  M       NNN N                 PMMMM+     P +L
Sbjct: 1   MEGGSSGNTSTSCLMMMGYGDHENNNNNNGNGNGNGNGNVTICAPPMMMMMPPP--PPSL 60

Query: 61  DNNNN--NNNNNKMFLPLSWSSTSSNNNAQTQRVSAFVPQSNTNNNDLLTTSTSKAKIMA 120
            NNNN   +NNN +FLP  +   ++NNN          PQ + N++    +S+ K+KIMA
Sbjct: 61  TNNNNAETSNNNILFLP--FMDNNNNNN----------PQEDNNSS----SSSIKSKIMA 120

Query: 121 HPLFPRLLAAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGR------GDDPALDQFME 180
           HP + RLL AY+NCQK+GAPPEVVARLE+ CA +    R++        G+DPALDQFME
Sbjct: 121 HPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFME 180

Query: 181 AYCEMLTKYEQELTKPFKEAMLFFSRIESQLK--TLAVSSDGFELVGQ---NECSKEIEV 240
           AYCEMLTKYEQEL+KPFKEAM+F SRIE Q K  TLA +S     +G+      S + EV
Sbjct: 181 AYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNGSSDEEV 240

Query: 241 DMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHY 300
           D+N ++IDPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQL+DWW RH 
Sbjct: 241 DVNNSFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHI 300

Query: 301 KWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVI 342
           KWPYPSESQK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYY+DNV+
Sbjct: 301 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVL 354

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BLAST of Cla015626 vs. Swiss-Prot
Match: STM_ARATH (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM PE=1 SV=2)

HSP 1 Score: 380.6 bits (976), Expect = 1.9e-104
Identity = 190/265 (71.70%), Postives = 216/265 (81.51%), Query Frame = 1


Query: 90  TTSTSKAKIMAHPLFPRLLAAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGR----GD 149
           ++++ KAKIMAHP + RLLAAYVNCQKVGAPPEVVARLE+AC+ A  +  + G     G+
Sbjct: 117 SSASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGE 176

Query: 150 DPALDQFMEAYCEMLTKYEQELTKPFKEAMLFFSRIESQLKTLAVSS-DGFELVGQ---- 209
           DP LDQFMEAYCEML KYEQEL+KPFKEAM+F  R+E Q K+L++SS   F   G+    
Sbjct: 177 DPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAID 236

Query: 210 --NECSKEIEVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEAR 269
             N  S E EVDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEAR
Sbjct: 237 RNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEAR 296

Query: 270 QQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDA 329
           QQLLDWWSRHYKWPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA
Sbjct: 297 QQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA 356

Query: 330 AHP-HYYLDNVICNPFSMD-CSSTL 342
            HP HY++DNV+ NPF MD  SST+
Sbjct: 357 THPHHYFMDNVLGNPFPMDHISSTM 381

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BLAST of Cla015626 vs. Swiss-Prot
Match: STM_BRAOL (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.2e-100
Identity = 181/260 (69.62%), Postives = 206/260 (79.23%), Query Frame = 1


Query: 88  LLTTSTSKAKIMAHPLFPRLLAAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGR---- 147
           +L++   KAKIMAHP + RLL AYVNCQKVGAPPEV ARLE+ C+ A  +  + G     
Sbjct: 117 VLSSLLVKAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTGSL 176

Query: 148 GDDPALDQFMEAYCEMLTKYEQELTKPFKEAMLFFSRIESQLKTLAVSSDGFELVGQ--- 207
           G+DP LDQFMEAYCEML KYEQEL+KPFKEAM+F   +E Q K+L++SS      G+   
Sbjct: 177 GEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAAI 236

Query: 208 ---NECSKEIEVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEA 267
              N  S E EVDMN  ++DPQAE++ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEA
Sbjct: 237 ERNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEA 296

Query: 268 RQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMD 327
           RQQLLDWWSRHYKWPYPSE QK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMD
Sbjct: 297 RQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 356

Query: 328 AAHP-HYYLDNVICNPFSMD 337
           A HP HY++ NV+ NPF +D
Sbjct: 357 ATHPLHYFMGNVLGNPFPID 376

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BLAST of Cla015626 vs. Swiss-Prot
Match: KNAT1_ARATH (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.0e-82
Identity = 177/349 (50.72%), Postives = 222/349 (63.61%), Query Frame = 1


Query: 6   SSGSSCSFMATCNSTNNNNTNTPMMMMIN-STNNPQTLDN-----NNNNNNNNKMFLPLS 65
           ++ +S ++    N+TNNNN +   M+  + S+  PQT +N     ++  NNNN   +   
Sbjct: 39  NNNNSSNYGPGYNNTNNNNHHHQHMLFPHMSSLLPQTTENCFRSDHDQPNNNNNPSVKSE 98

Query: 66  WSSTSSNNNAQTQRVSAFVPQSNTNNNDLLT-TSTSKAKIMAHPLFPRLLAAYVNCQKVG 125
            SS+  N+ +   R      ++N NNND ++     KAKI+AHP +  LL AY++CQK+G
Sbjct: 99  ASSSRINHYSMLMRAIHNTQEANNNNNDNVSDVEAMKAKIIAHPHYSTLLQAYLDCQKIG 158

Query: 126 APPEVVARL-------EQACAVATGSCRAAGRGDDPALDQFMEAYCEMLTKYEQELTKPF 185
           APP+VV R+       E     +T S  A+ R  DP LDQFMEAYC+ML KY +ELT+P 
Sbjct: 159 APPDVVDRITAARQDFEARQQRSTPSVSASSR--DPELDQFMEAYCDMLVKYREELTRPI 218

Query: 186 KEAMLFFSRIESQLKTLAVSS----DGFELVGQNECSKEIEVDMNEN------YIDPQAE 245
           +EAM F  RIESQL  L  S     +  +    N  S + E + N         IDP+AE
Sbjct: 219 QEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDNMGSSDEEQENNSGGETELPEIDPRAE 278

Query: 246 EKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVA 305
           ++ELK  LL+KYSGYL SLKQE  KKKK GKLPKEARQ+LL WW  HYKWPYPSES+KVA
Sbjct: 279 DRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVA 338

Query: 306 LAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDA-AHPHY---YLD 327
           LAESTGLD KQINNWFINQRKRHWKPSEDMQF+VMD   HPH+   Y+D
Sbjct: 339 LAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMD 385

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BLAST of Cla015626 vs. TrEMBL
Match: A0A0A0K5G5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041370 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 1.4e-167
Identity = 305/352 (86.65%), Postives = 317/352 (90.06%), Query Frame = 1


Query: 1   MEGGGSSGSSCSFMATCNST-NNNNTNTP--MMMMINST-NNPQTLDNNNNNNNNNKMFL 60
           MEGGGSSGSSCSFMATCNST NNNN+N    MMMMIN T NNPQT DN        KMFL
Sbjct: 1   MEGGGSSGSSCSFMATCNSTTNNNNSNNTSMMMMMINKTHNNPQTFDN--------KMFL 60

Query: 61  PLSWSSTSSNNN----AQTQR-VSAFVPQSNTNNND---LLTTSTSKAKIMAHPLFPRLL 120
           PLSWSS++SNNN     QTQ  +SAF+PQ +TNN++   +  TSTSKAKIMAHPLFPRLL
Sbjct: 61  PLSWSSSTSNNNNNNNVQTQTPLSAFLPQPHTNNSNDHVVPPTSTSKAKIMAHPLFPRLL 120

Query: 121 AAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGRGDDPALDQFMEAYCEMLTKYEQELT 180
            AYVNCQKVGAPPEVVARLEQACAVATGSCRAAG G+DPALDQFMEAYCEMLTKYEQELT
Sbjct: 121 TAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGHGNDPALDQFMEAYCEMLTKYEQELT 180

Query: 181 KPFKEAMLFFSRIESQLKTLAVSSDGFELVGQNECSKEIEVDMNENYIDPQAEEKELKGQ 240
           KPFKEAMLFFSRIESQLK  AVSSDGFELVGQNECSKEIEVDMNENYIDPQAE KELKGQ
Sbjct: 181 KPFKEAMLFFSRIESQLKAEAVSSDGFELVGQNECSKEIEVDMNENYIDPQAEVKELKGQ 240

Query: 241 LLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 300
           LLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL
Sbjct: 241 LLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 300

Query: 301 DLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSST 341
           DLKQINNWFINQRKRHWKP+EDMQFVVMDA HPHYYLDNVICNPFSMDCSS+
Sbjct: 301 DLKQINNWFINQRKRHWKPTEDMQFVVMDAGHPHYYLDNVICNPFSMDCSSS 344

[Close]

BLAST of Cla015626 vs. TrEMBL
Match: V9LXM5_TOBAC (Shoot meristemless OS=Nicotiana tabacum GN=STM PE=2 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 5.4e-119
Identity = 225/359 (62.67%), Postives = 267/359 (74.37%), Query Frame = 1


Query: 1   MEGGGSSGSSCSFMATCNSTNNNNTNT------PMMMMIN-----STNNPQTLDNNNNNN 60
           MEGGGSSG++   M   +  NNNN+        PMMMM+      + NN ++ +N   NN
Sbjct: 1   MEGGGSSGNTSCLMGYGDDNNNNNSGNAALCPPPMMMMMMPPPPINNNNGESSNNIGGNN 60

Query: 61  NNNKMFLPLSWSSTSSNNNAQTQRVSAFVPQSNTNNNDLLTTSTSKAKIMAHPLFPRLLA 120
           NNN +FLP  +   ++NNN          P  + N +   ++S+ K+KIMAHP +PRLL+
Sbjct: 61  NNNILFLP--FMDNNNNNN----------PHEDANCS---SSSSIKSKIMAHPHYPRLLS 120

Query: 121 AYVNCQKVGAPPEVVARLEQACAVATGSCRAAGR--GDDPALDQFMEAYCEMLTKYEQEL 180
           AYVNCQK+GAPPEVVARLE+ CA +    R +G   G+DPALDQFMEAYCEMLTKYEQEL
Sbjct: 121 AYVNCQKIGAPPEVVARLEEVCATSATIGRNSGGIIGEDPALDQFMEAYCEMLTKYEQEL 180

Query: 181 TKPFKEAMLFFSRIESQLKTLAVSSDGFELVGQNEC-----SKEIEVDMNENYIDPQAEE 240
           +KPFKEAM+F SRIE Q K L ++S    +    E      S E EVD+N  +IDPQAE+
Sbjct: 181 SKPFKEAMVFLSRIECQFKALTLTSSSESVAALGEAIDRNGSSEEEVDVNNGFIDPQAED 240

Query: 241 KELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVAL 300
           +ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDWW+RHYKWPYPSESQK+AL
Sbjct: 241 QELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLAL 300

Query: 301 AESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSSTL 342
           AESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYY+DNV+ NPF MD + TL
Sbjct: 301 AESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLGNPFPMDITPTL 344

[Close]

BLAST of Cla015626 vs. TrEMBL
Match: A5C6E1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033719 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.5e-118
Identity = 234/365 (64.11%), Postives = 269/365 (73.70%), Query Frame = 1


Query: 3   GGGSSGSSCSFMATCNSTNNNNTNTPMMMMINSTNNPQTLDNNNNNNNNNKMFLPLS-WS 62
           GGG   S+ S M    + +N  ++  MMM + S++N +T          +K+FLPL  W+
Sbjct: 5   GGGGGPSTTSCMMGFGNNSNGLSSMVMMMPLMSSSNAET----------SKVFLPLPFWN 64

Query: 63  STSSNNNAQ---TQRVSAFVPQ-----------------SNTNNNDLLTTSTSKAKIMAH 122
           + +S+NN     +Q+VSA +PQ                 SNT NN   T+ + KAKIMAH
Sbjct: 65  NNNSSNNPNQQSSQKVSALMPQGSCNHNNSGCYFMEGSNSNTTNNHDCTSCSMKAKIMAH 124

Query: 123 PLFPRLLAAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGR--GDDPALDQFMEAYCEM 182
           P +PRLLAAYVNCQKVGAPPEVVARLE+ACA      R+A    G+DPALDQFMEAYCEM
Sbjct: 125 PHYPRLLAAYVNCQKVGAPPEVVARLEEACASEEAMGRSATSCVGEDPALDQFMEAYCEM 184

Query: 183 LTKYEQELTKPFKEAMLFFSRIESQLKTLAVS-SDGF--ELVGQNECSKEIEVDMNENYI 242
           LTKYEQELTKPFKEAMLF SRIE Q K L V+ SD       G+   S+E EVD N+  I
Sbjct: 185 LTKYEQELTKPFKEAMLFLSRIECQFKALTVAPSDSVCGSYAGRVGSSEE-EVDGNDTCI 244

Query: 243 DPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSE 302
           DPQAE++ELKGQLLRKYSGYLGSLKQEFLKKKK GKLPKEARQQLLDWWSRHYKWPYPSE
Sbjct: 245 DPQAEDRELKGQLLRKYSGYLGSLKQEFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSE 304

Query: 303 SQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMD 342
           SQK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HPHYY+D+V+ NPF MD
Sbjct: 305 SQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYMDSVMGNPFPMD 358

[Close]

BLAST of Cla015626 vs. TrEMBL
Match: F6HIE0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g01190 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.5e-118
Identity = 234/365 (64.11%), Postives = 269/365 (73.70%), Query Frame = 1


Query: 3   GGGSSGSSCSFMATCNSTNNNNTNTPMMMMINSTNNPQTLDNNNNNNNNNKMFLPLS-WS 62
           GGG   S+ S M    + +N  ++  MMM + S++N +T          +K+FLPL  W+
Sbjct: 7   GGGGGPSTTSCMMGFGNNSNGLSSMVMMMPLMSSSNAET----------SKVFLPLPFWN 66

Query: 63  STSSNNNAQ---TQRVSAFVPQ-----------------SNTNNNDLLTTSTSKAKIMAH 122
           + +S+NN     +Q+VSA +PQ                 SNT NN   T+ + KAKIMAH
Sbjct: 67  NNNSSNNPNQQSSQKVSALMPQGSCNHNNSGCYFMEGSNSNTTNNHDCTSCSMKAKIMAH 126

Query: 123 PLFPRLLAAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGR--GDDPALDQFMEAYCEM 182
           P +PRLLAAYVNCQKVGAPPEVVARLE+ACA      R+A    G+DPALDQFMEAYCEM
Sbjct: 127 PHYPRLLAAYVNCQKVGAPPEVVARLEEACASEEAMGRSATSCVGEDPALDQFMEAYCEM 186

Query: 183 LTKYEQELTKPFKEAMLFFSRIESQLKTLAVS-SDGF--ELVGQNECSKEIEVDMNENYI 242
           LTKYEQELTKPFKEAMLF SRIE Q K L V+ SD       G+   S+E EVD N+  I
Sbjct: 187 LTKYEQELTKPFKEAMLFLSRIECQFKALTVAPSDSVCGSYAGRVGSSEE-EVDGNDTCI 246

Query: 243 DPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSE 302
           DPQAE++ELKGQLLRKYSGYLGSLKQEFLKKKK GKLPKEARQQLLDWWSRHYKWPYPSE
Sbjct: 247 DPQAEDRELKGQLLRKYSGYLGSLKQEFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSE 306

Query: 303 SQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMD 342
           SQK+ALAESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDA HPHYY+D+V+ NPF MD
Sbjct: 307 SQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPHYYMDSVMGNPFPMD 360

[Close]

BLAST of Cla015626 vs. TrEMBL
Match: O64415_TOBAC (NTH15 protein OS=Nicotiana tabacum GN=NTH15 PE=2 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 8.6e-117
Identity = 225/358 (62.85%), Postives = 265/358 (74.02%), Query Frame = 1


Query: 1   MEGGGSSGSSCSFMATCNSTNNNNTN------TPMMMM----INSTNNPQTLDNNNNNNN 60
           M GGGSSG++ S +      NNNN +       P MMM    IN+ NN ++ +N   NNN
Sbjct: 1   MGGGGSSGNTSSCLMGYGDDNNNNNSGNAALCPPPMMMPPPPINN-NNGESSNNIGGNNN 60

Query: 61  NNKMFLPLSWSSTSSNNNAQTQRVSAFVPQSNTNNNDLLTTSTSKAKIMAHPLFPRLLAA 120
           NN +FLP      ++NNN          P  + N +   ++S+ K+KIMAHP +PRLL+A
Sbjct: 61  NNILFLPFM---ANNNNN----------PHEDANCS---SSSSIKSKIMAHPHYPRLLSA 120

Query: 121 YVNCQKVGAPPEVVARLEQACAVATGSCRAAGR--GDDPALDQFMEAYCEMLTKYEQELT 180
           YVNCQK+GAPPEVVARLE+ CA +    R +G   G+DPALDQFMEAYCEMLTKYEQEL+
Sbjct: 121 YVNCQKIGAPPEVVARLEEVCATSATIGRNSGGIIGEDPALDQFMEAYCEMLTKYEQELS 180

Query: 181 KPFKEAMLFFSRIESQLKTLAVSSDGFELVGQNEC-----SKEIEVDMNENYIDPQAEEK 240
           KPFKEAM+F SRIE Q K L ++S    +    E      S E EVD+N  +IDPQAE++
Sbjct: 181 KPFKEAMVFLSRIECQFKALTLTSSSESVAALGEAIDRNGSSEEEVDVNNGFIDPQAEDQ 240

Query: 241 ELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALA 300
           ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDWW+RHYKWPYPSESQK+ALA
Sbjct: 241 ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLALA 300

Query: 301 ESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSSTL 342
           ESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYY+DNV+ NPF MD + TL
Sbjct: 301 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLGNPFPMDITPTL 341

[Close]

BLAST of Cla015626 vs. NCBI nr
Match: gi|449453537|ref|XP_004144513.1| (PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis sativus])

HSP 1 Score: 597.0 bits (1538), Expect = 2.0e-167
Identity = 305/352 (86.65%), Postives = 317/352 (90.06%), Query Frame = 1


Query: 1   MEGGGSSGSSCSFMATCNST-NNNNTNTP--MMMMINST-NNPQTLDNNNNNNNNNKMFL 60
           MEGGGSSGSSCSFMATCNST NNNN+N    MMMMIN T NNPQT DN        KMFL
Sbjct: 1   MEGGGSSGSSCSFMATCNSTTNNNNSNNTSMMMMMINKTHNNPQTFDN--------KMFL 60

Query: 61  PLSWSSTSSNNN----AQTQR-VSAFVPQSNTNNND---LLTTSTSKAKIMAHPLFPRLL 120
           PLSWSS++SNNN     QTQ  +SAF+PQ +TNN++   +  TSTSKAKIMAHPLFPRLL
Sbjct: 61  PLSWSSSTSNNNNNNNVQTQTPLSAFLPQPHTNNSNDHVVPPTSTSKAKIMAHPLFPRLL 120

Query: 121 AAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGRGDDPALDQFMEAYCEMLTKYEQELT 180
            AYVNCQKVGAPPEVVARLEQACAVATGSCRAAG G+DPALDQFMEAYCEMLTKYEQELT
Sbjct: 121 TAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGHGNDPALDQFMEAYCEMLTKYEQELT 180

Query: 181 KPFKEAMLFFSRIESQLKTLAVSSDGFELVGQNECSKEIEVDMNENYIDPQAEEKELKGQ 240
           KPFKEAMLFFSRIESQLK  AVSSDGFELVGQNECSKEIEVDMNENYIDPQAE KELKGQ
Sbjct: 181 KPFKEAMLFFSRIESQLKAEAVSSDGFELVGQNECSKEIEVDMNENYIDPQAEVKELKGQ 240

Query: 241 LLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 300
           LLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL
Sbjct: 241 LLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 300

Query: 301 DLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSST 341
           DLKQINNWFINQRKRHWKP+EDMQFVVMDA HPHYYLDNVICNPFSMDCSS+
Sbjct: 301 DLKQINNWFINQRKRHWKPTEDMQFVVMDAGHPHYYLDNVICNPFSMDCSSS 344

[Close]

BLAST of Cla015626 vs. NCBI nr
Match: gi|659110904|ref|XP_008455471.1| (PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis melo])

HSP 1 Score: 592.0 bits (1525), Expect = 6.5e-166
Identity = 302/354 (85.31%), Postives = 314/354 (88.70%), Query Frame = 1


Query: 1   MEGGGSSGSSCSFMATCNST-NNNNTNTP--MMMMINSTNN-PQTLDNNNNNNNNNKMFL 60
           MEGGGSSGSSCSFMATCNST NNNN+N    MMMMIN TNN PQT DN        KMFL
Sbjct: 1   MEGGGSSGSSCSFMATCNSTTNNNNSNNTSMMMMMINKTNNNPQTFDN--------KMFL 60

Query: 61  PLSWSSTSSNNN----AQTQR-VSAFVPQSNTNNN---DLLTTSTSKAKIMAHPLFPRLL 120
           PLSWSS++SNNN     QTQ  +S F+PQ +TNN+   D   TSTSKAKIMAHPLFPRLL
Sbjct: 61  PLSWSSSTSNNNNNNNVQTQTPLSTFLPQPHTNNSNDHDAPPTSTSKAKIMAHPLFPRLL 120

Query: 121 AAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGRGDDPALDQFMEAYCEMLTKYEQELT 180
            AYVNCQKVGAPPEVVARLEQACAVATGSCRAAG G+DPALDQFMEAYCEMLTKYEQELT
Sbjct: 121 TAYVNCQKVGAPPEVVARLEQACAVATGSCRAAGHGNDPALDQFMEAYCEMLTKYEQELT 180

Query: 181 KPFKEAMLFFSRIESQLKTLAVSSDGFELVGQNECSKEIEVDMNENYIDPQAEEKELKGQ 240
           KPFKEAMLFFSRIESQLK  AVSSDGF+LV QN+CSKEIEVDMNENYIDPQAE KELKGQ
Sbjct: 181 KPFKEAMLFFSRIESQLKAQAVSSDGFDLVAQNDCSKEIEVDMNENYIDPQAEVKELKGQ 240

Query: 241 LLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 300
           LLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL
Sbjct: 241 LLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGL 300

Query: 301 DLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSSTLF 343
           DLKQINNWFINQRKRHWKP+EDMQFVVMD  HPHYYLDNVICNPFSMDCSS+ F
Sbjct: 301 DLKQINNWFINQRKRHWKPTEDMQFVVMDTGHPHYYLDNVICNPFSMDCSSSHF 346

[Close]

BLAST of Cla015626 vs. NCBI nr
Match: gi|698582227|ref|XP_009777770.1| (PREDICTED: homeobox protein knotted-1-like LET6 isoform X2 [Nicotiana sylvestris])

HSP 1 Score: 436.8 bits (1122), Expect = 3.5e-119
Identity = 225/357 (63.03%), Postives = 268/357 (75.07%), Query Frame = 1


Query: 1   MEGGGSSGSSCSFMATCNSTNNNNTNT------PMMMMIN-----STNNPQTLDNNNNNN 60
           MEGGGSSG++   M   +  NNNN+        PMMMM+      + NN ++ +N   NN
Sbjct: 1   MEGGGSSGNTSCLMGYGDDNNNNNSGNAALCPPPMMMMMMPPPPINNNNGESSNNIGGNN 60

Query: 61  NNNKMFLPLSWSSTSSNNNAQTQRVSAFVPQSNTNNNDLLTTSTSKAKIMAHPLFPRLLA 120
           NNN +FLP  +   ++NNN          P  + N +   ++S+ K+KIMAHP +PRLL+
Sbjct: 61  NNNILFLP--FMDNNNNNN----------PHEDANCS---SSSSIKSKIMAHPHYPRLLS 120

Query: 121 AYVNCQKVGAPPEVVARLEQACAVATGSCRAAGR--GDDPALDQFMEAYCEMLTKYEQEL 180
           AYVNCQK+GAPPEVVARLE+ CA +    R +G   G+DPALDQFMEAYCEMLTKYEQEL
Sbjct: 121 AYVNCQKIGAPPEVVARLEEVCATSATIGRNSGGIIGEDPALDQFMEAYCEMLTKYEQEL 180

Query: 181 TKPFKEAMLFFSRIESQLKTLAVSSDGFELVGQ---NECSKEIEVDMNENYIDPQAEEKE 240
           +KPFKEAM+F SRIE Q K L ++S     +G+      S E EVD+N  +IDPQAE++E
Sbjct: 181 SKPFKEAMVFLSRIECQFKALTLTSSSESALGEAIDRNGSSEEEVDVNNGFIDPQAEDQE 240

Query: 241 LKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAE 300
           LKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDWW+RHYKWPYPSESQK+ALAE
Sbjct: 241 LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLALAE 300

Query: 301 STGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSSTL 342
           STGLD KQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYY+DNV+ NPF MD + TL
Sbjct: 301 STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLGNPFPMDITPTL 342

[Close]

BLAST of Cla015626 vs. NCBI nr
Match: gi|698582224|ref|XP_009777769.1| (PREDICTED: homeobox protein knotted-1-like LET6 isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 435.6 bits (1119), Expect = 7.8e-119
Identity = 225/359 (62.67%), Postives = 267/359 (74.37%), Query Frame = 1


Query: 1   MEGGGSSGSSCSFMATCNSTNNNNTNT------PMMMMIN-----STNNPQTLDNNNNNN 60
           MEGGGSSG++   M   +  NNNN+        PMMMM+      + NN ++ +N   NN
Sbjct: 1   MEGGGSSGNTSCLMGYGDDNNNNNSGNAALCPPPMMMMMMPPPPINNNNGESSNNIGGNN 60

Query: 61  NNNKMFLPLSWSSTSSNNNAQTQRVSAFVPQSNTNNNDLLTTSTSKAKIMAHPLFPRLLA 120
           NNN +FLP  +   ++NNN          P  + N +   ++S+ K+KIMAHP +PRLL+
Sbjct: 61  NNNILFLP--FMDNNNNNN----------PHEDANCS---SSSSIKSKIMAHPHYPRLLS 120

Query: 121 AYVNCQKVGAPPEVVARLEQACAVATGSCRAAGR--GDDPALDQFMEAYCEMLTKYEQEL 180
           AYVNCQK+GAPPEVVARLE+ CA +    R +G   G+DPALDQFMEAYCEMLTKYEQEL
Sbjct: 121 AYVNCQKIGAPPEVVARLEEVCATSATIGRNSGGIIGEDPALDQFMEAYCEMLTKYEQEL 180

Query: 181 TKPFKEAMLFFSRIESQLKTLAVSSDGFELVGQNEC-----SKEIEVDMNENYIDPQAEE 240
           +KPFKEAM+F SRIE Q K L ++S    +    E      S E EVD+N  +IDPQAE+
Sbjct: 181 SKPFKEAMVFLSRIECQFKALTLTSSSESVAALGEAIDRNGSSEEEVDVNNGFIDPQAED 240

Query: 241 KELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVAL 300
           +ELKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDWW+RHYKWPYPSESQK+AL
Sbjct: 241 QELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLAL 300

Query: 301 AESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSSTL 342
           AESTGLD KQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYY+DNV+ NPF MD + TL
Sbjct: 301 AESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLGNPFPMDITPTL 344

[Close]

BLAST of Cla015626 vs. NCBI nr
Match: gi|697119447|ref|XP_009613678.1| (PREDICTED: homeobox protein knotted-1-like LET6 isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 434.1 bits (1115), Expect = 2.3e-118
Identity = 227/357 (63.59%), Postives = 263/357 (73.67%), Query Frame = 1


Query: 1   MEGGGSSGSSCSFMATCNSTNNNNTNT------PMMMMIN----STNNPQTLDNNNNNNN 60
           MEGGGSSG++   M      NNNN+        PMMMM+     + NN ++ +N   NNN
Sbjct: 1   MEGGGSSGNTSCLMGYNGDDNNNNSGNAALCPPPMMMMMMPPPINNNNAESSNNIGGNNN 60

Query: 61  NNKMFLPLSWSSTSSNNNAQTQRVSAFVPQSNTNNNDLLTTSTS-KAKIMAHPLFPRLLA 120
           NN +FLP        NNN             N  + D   +STS K+KIMAHP +PRLL+
Sbjct: 61  NNILFLPFM-----DNNN-------------NNPHEDANCSSTSIKSKIMAHPHYPRLLS 120

Query: 121 AYVNCQKVGAPPEVVARLEQACAVATGSCRAAGR--GDDPALDQFMEAYCEMLTKYEQEL 180
           AYVNCQK+GAPPEVVARLE+ CA +    R +G   G+DPALDQFMEAYCEMLTKYEQEL
Sbjct: 121 AYVNCQKIGAPPEVVARLEEVCATSATIGRNSGGIIGEDPALDQFMEAYCEMLTKYEQEL 180

Query: 181 TKPFKEAMLFFSRIESQLKTLAVSSDGFELVGQ---NECSKEIEVDMNENYIDPQAEEKE 240
           +KPFKEAM+F SRIE Q K L ++S     +G+      S E EVD+N  +IDPQAE++E
Sbjct: 181 SKPFKEAMVFLSRIECQFKALTLTSSCESALGEAIDRNGSSEEEVDVNNGFIDPQAEDQE 240

Query: 241 LKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAE 300
           LKGQLLRKYSGYLGSLKQEF+KK+K GKLPKEARQQLLDWW+RHYKWPYPSESQK+ALAE
Sbjct: 241 LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLALAE 300

Query: 301 STGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICNPFSMDCSSTL 342
           STGLD KQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYY+DNV+ NPF MD + TL
Sbjct: 301 STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYMDNVLGNPFPMDMTPTL 339

The following BLAST results are available for this feature:

BLAST of Cla015626 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSBH1_SOYBN	1.4e-112	63.34	Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1	[more]
LET6_SOLLC	2.4e-112	59.14	Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum GN=LET6 PE=2 SV=1	[more]
STM_ARATH	1.9e-104	71.70	Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM PE=1 SV=2	[more]
STM_BRAOL	1.2e-100	69.62	Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM PE=2 SV=1	[more]
KNAT1_ARATH	2.0e-82	50.72	Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1 PE=1 SV=1	[more]

BLAST of Cla015626 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5G5_CUCSA	1.4e-167	86.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G041370 PE=4 SV=1	[more]
V9LXM5_TOBAC	5.4e-119	62.67	Shoot meristemless OS=Nicotiana tabacum GN=STM PE=2 SV=1	[more]
A5C6E1_VITVI	3.5e-118	64.11	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033719 PE=4 SV=1	[more]
F6HIE0_VITVI	3.5e-118	64.11	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g01190 PE=4 SV=...	[more]
O64415_TOBAC	8.6e-117	62.85	NTH15 protein OS=Nicotiana tabacum GN=NTH15 PE=2 SV=1	[more]

BLAST of Cla015626 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453537\|ref\|XP_004144513.1\|	2.0e-167	86.65	PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis sativus]	[more]
gi\|659110904\|ref\|XP_008455471.1\|	6.5e-166	85.31	PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis melo]	[more]
gi\|698582227\|ref\|XP_009777770.1\|	3.5e-119	63.03	PREDICTED: homeobox protein knotted-1-like LET6 isoform X2 [Nicotiana sylvestris...	[more]
gi\|698582224\|ref\|XP_009777769.1\|	7.8e-119	62.67	PREDICTED: homeobox protein knotted-1-like LET6 isoform X1 [Nicotiana sylvestris...	[more]
gi\|697119447\|ref\|XP_009613678.1\|	2.3e-118	63.59	PREDICTED: homeobox protein knotted-1-like LET6 isoform X2 [Nicotiana tomentosif...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001356	Homeobox_dom
IPR005539	ELK_dom
IPR005540	KNOX1
IPR005541	KNOX2
IPR008422	Homeobox_KN_domain
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048440	carpel development
biological_process	GO:0009934	regulation of meristem structural organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla015626	Cla015626.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 246..311 score: 1.4
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 244..307 score: 1
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 224..245 score: 2.1
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 224..245 score: 1.
IPR005539	ELK domain	PROFILE	PS51213	ELK	coord: 224..244 score: 11
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 95..132 score: 7.7
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 92..136 score: 2.1
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 144..188 score: 7.1
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 139..190 score: 2.2
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 264..303 score: 5.6
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 249..309 score: 4.6
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 246..321 score: 1.97
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 282..305 scor
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 14..336 score: 2.7E
None	No IPR available	PANTHER	PTHR11850:SF100	HOMEOBOX PROTEIN SHOOT MERISTEMLESS	coord: 14..336 score: 2.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla015626	Cla97C02G028600	Watermelon (97103) v2	wmwmbB317
Cla015626	Csa7G041370	Cucumber (Chinese Long) v2	cuwmB604
Cla015626	MELO3C018844	Melon (DHL92) v3.5.1	mewmB241
Cla015626	ClCG02G002200	Watermelon (Charleston Gray)	wcgwmB198
Cla015626	CSPI07G03420	Wild cucumber (PI 183967)	cpiwmB624
Cla015626	Cucsa.148830	Cucumber (Gy14) v1	cgywmB260
Cla015626	CmaCh11G018050	Cucurbita maxima (Rimu)	cmawmB129
Cla015626	CmoCh11G018800	Cucurbita moschata (Rifu)	cmowmB117
Cla015626	Lsi11G014220	Bottle gourd (USVL1VR-Ls)	lsiwmB106
Cla015626	Cp4.1LG04g03800	Cucurbita pepo (Zucchini)	cpewmB675
Cla015626	CsGy7G003090	Cucumber (Gy14) v2	cgybwmB566
Cla015626	MELO3C018844.2	Melon (DHL92) v3.6.1	medwmB233
Cla015626	Carg27156	Silver-seed gourd	carwmB0296
Cla015626	CsaV3_7G003300	Cucumber (Chinese Long) v3	cucwmB634
Cla015626	Bhi05G001210	Wax gourd	wgowmB272

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla015626	Cucurbita maxima (Rimu)	cmawmB503
Cla015626	Cucurbita moschata (Rifu)	cmowmB496
Cla015626	Watermelon (Charleston Gray)	wcgwmB079
Cla015626	Cucumber (Chinese Long) v2	cuwmB603
Cla015626	Cucurbita pepo (Zucchini)	cpewmB268
Cla015626	Bottle gourd (USVL1VR-Ls)	lsiwmB105
Cla015626	Cucumber (Gy14) v2	cgybwmB565
Cla015626	Cucumber (Chinese Long) v3	cucwmB633