Cla015175 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAACTTGACATTCTCTTCAATTCTAACGCTTGAAATCTCCAACTTTGACAACGTAATGGTGACCAATGTCCGTGGGGTATGTTTTATATATTGAAGCATGCAATTAACTCCAAATTTAAGTTGATGGGCTACAATATGTAAATTTTGTATTTTTTTCACTTTTTGGCAAAGGTGGTTGCGACGATCAAACACGCCGGACGAGTAACAGTAGAGAGAACGATACGAGGATCAATCATTTGTGCCGTGAGCGTGGCGGCGGTAAGTGCTTGGACAACACCATTAGCATACACAAACTCAAAGCATGCGATGTTGGGGGTAGTGAGGTCGAGCTGCGAGGAGCTCGAGGCGTATGGGATTAGGGTTAATTGCATTGTCACCGCAGGGGGTGGCGACGCGGTTGGCTTGTCGGGGTTTGAAGTTGGAAGAGAGTGA ATGAAAAACTTGACATTCTCTTCAATTCTAACGCTTGAAATCTCCAACTTTGACAACGTAATGGTGACCAATGTCCGTGGGGTGGTTGCGACGATCAAACACGCCGGACGAGTAACAGTAGAGAGAACGATACGAGGATCAATCATTTGTGCCGTGAGCGTGGCGGCGGTAAGTGCTTGGACAACACCATTAGCATACACAAACTCAAAGCATGCGATGTTGGGGGTAGTGAGGTCGAGCTGCGAGGAGCTCGAGGCGTATGGGATTAGGGTTAATTGCATTGTCACCGCAGGGGGTGGCGACGCGGTTGGCTTGTCGGGGTTTGAAGTTGGAAGAGAGTGA ATGAAAAACTTGACATTCTCTTCAATTCTAACGCTTGAAATCTCCAACTTTGACAACGTAATGGTGACCAATGTCCGTGGGGTGGTTGCGACGATCAAACACGCCGGACGAGTAACAGTAGAGAGAACGATACGAGGATCAATCATTTGTGCCGTGAGCGTGGCGGCGGTAAGTGCTTGGACAACACCATTAGCATACACAAACTCAAAGCATGCGATGTTGGGGGTAGTGAGGTCGAGCTGCGAGGAGCTCGAGGCGTATGGGATTAGGGTTAATTGCATTGTCACCGCAGGGGGTGGCGACGCGGTTGGCTTGTCGGGGTTTGAAGTTGGAAGAGAGTGA MKNLTFSSILTLEISNFDNVMVTNVRGVVATIKHAGRVTVERTIRGSIICAVSVAAVSAWTTPLAYTNSKHAMLGVVRSSCEELEAYGIRVNCIVTAGGGDAVGLSGFEVGRE
BLAST of Cla015175 vs. Swiss-Prot
Match: SDR3B_ARATH (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.0e-18 Identity = 48/105 (45.71%), Postives = 62/105 (59.05%), Query Frame = 1
BLAST of Cla015175 vs. Swiss-Prot
Match: SDR4_ARATH (Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 7.4e-18 Identity = 46/93 (49.46%), Postives = 55/93 (59.14%), Query Frame = 1
BLAST of Cla015175 vs. Swiss-Prot
Match: SDR3A_ARATH (Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-17 Identity = 46/85 (54.12%), Postives = 52/85 (61.18%), Query Frame = 1
BLAST of Cla015175 vs. Swiss-Prot
Match: SDR5_ARATH (Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17 Identity = 51/101 (50.50%), Postives = 59/101 (58.42%), Query Frame = 1
BLAST of Cla015175 vs. Swiss-Prot
Match: SDR3C_ARATH (Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 7.7e-15 Identity = 41/85 (48.24%), Postives = 51/85 (60.00%), Query Frame = 1
BLAST of Cla015175 vs. TrEMBL
Match: A0A0A0K5W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414470 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 4.7e-27 Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 1
BLAST of Cla015175 vs. TrEMBL
Match: A0A0A0K851_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414460 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-24 Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 1
BLAST of Cla015175 vs. TrEMBL
Match: A0A0A0KBA9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414480 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24 Identity = 62/95 (65.26%), Postives = 76/95 (80.00%), Query Frame = 1
BLAST of Cla015175 vs. TrEMBL
Match: A0A0A0K9K9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G414490 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.8e-24 Identity = 61/105 (58.10%), Postives = 79/105 (75.24%), Query Frame = 1
BLAST of Cla015175 vs. TrEMBL
Match: B9I9D8_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0014s11070g PE=4 SV=2) HSP 1 Score: 115.9 bits (289), Expect = 3.1e-23 Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 1
BLAST of Cla015175 vs. NCBI nr
Match: gi|449436383|ref|XP_004135972.1| (PREDICTED: short-chain dehydrogenase reductase 3b-like isoform X1 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 6.7e-27 Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 1
BLAST of Cla015175 vs. NCBI nr
Match: gi|778728359|ref|XP_011659411.1| (PREDICTED: short-chain dehydrogenase reductase 3b-like isoform X2 [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 6.7e-27 Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 1
BLAST of Cla015175 vs. NCBI nr
Match: gi|720084271|ref|XP_010243159.1| (PREDICTED: short-chain dehydrogenase reductase 3b-like [Nelumbo nucifera]) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24 Identity = 60/92 (65.22%), Postives = 71/92 (77.17%), Query Frame = 1
BLAST of Cla015175 vs. NCBI nr
Match: gi|659122936|ref|XP_008461400.1| (PREDICTED: short-chain dehydrogenase reductase 3b-like isoform X1 [Cucumis melo]) HSP 1 Score: 119.8 bits (299), Expect = 3.1e-24 Identity = 62/105 (59.05%), Postives = 79/105 (75.24%), Query Frame = 1
BLAST of Cla015175 vs. NCBI nr
Match: gi|778728353|ref|XP_004136145.2| (PREDICTED: short-chain dehydrogenase reductase 3b-like [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 3.1e-24 Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |