Cla014666 (gene) Watermelon (97103) v1

Overview
NameCla014666
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionTransducin family protein (AHRD V1 ***- D7LZI0_ARALL)
LocationChr7 : 18908916 .. 18909608 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCGATGGTGGTCACTGGGATCTGTATGGTGGGAGAAACTAAGCCGCAACTTTGTTCCTGTTCAATGCACAAAAGTGATATTTGTTCCTCCATGGGAAGGATTTTCGCCCAATTCTTCGAGGTTAAGCATTATGGCGAGTGCAACAGAACATCATAGGCAAGCAGATGTGCAGGTAATTTCTTCCCTTCGACGATATACAAATAAAACCTAAATTTGTAAATTCCCAAATTCATTTTCTCTTTACCTCAGGTTTGATGGAACTTTACTTGAGTTGTTCTATTATAACATCTTTTATAGCTATCTGGTCCATGATTTGGTGAAAGCACTCCATGCAAATTCTTAGAGAGCATGTGGAATCTTGTTTCTACGTTGTAGTTGCACTTGCACCTCTTTTTGTTGGTTGCTCTCCGGGTTTCTTTGCCAAGAGTTTCTAGGAATGTTTAATCCCTTTACTATAAGTAATAGATGTGTTCAGTTTTTAAAATTTTCCCTTTTTCAGCCATGTACGAGCACCGTATTAAGATGAATTGATTTCCTTGCGCAGGACAATGTAAGGGGCTTGAGTCATGCAGACTTTTTGAAGATTTTGATTCACAGTCTCGATCTTTCTTATCGGCTAGAATGGACTGATGAGCGAAAAGTAAAACTCACACGACATGGCAATGAGTTGGGAACTTTTCAAATATAA

mRNA sequence

ATGATCCGATGGTGGTCACTGGGATCTGTATGGTGGGAGAAACTAAGCCGCAACTTTGTTCCTGTTCAATGCACAAAAGTGATATTTGTTCCTCCATGGGAAGGATTTTCGCCCAATTCTTCGAGGTTAAGCATTATGGCGAGTGCAACAGAACATCATAGGCAAGCAGATGTGCAGGACAATGTAAGGGGCTTGAGTCATGCAGACTTTTTGAAGATTTTGATTCACAGTCTCGATCTTTCTTATCGGCTAGAATGGACTGATGAGCGAAAAGTAAAACTCACACGACATGGCAATGAGTTGGGAACTTTTCAAATATAA

Coding sequence (CDS)

ATGATCCGATGGTGGTCACTGGGATCTGTATGGTGGGAGAAACTAAGCCGCAACTTTGTTCCTGTTCAATGCACAAAAGTGATATTTGTTCCTCCATGGGAAGGATTTTCGCCCAATTCTTCGAGGTTAAGCATTATGGCGAGTGCAACAGAACATCATAGGCAAGCAGATGTGCAGGACAATGTAAGGGGCTTGAGTCATGCAGACTTTTTGAAGATTTTGATTCACAGTCTCGATCTTTCTTATCGGCTAGAATGGACTGATGAGCGAAAAGTAAAACTCACACGACATGGCAATGAGTTGGGAACTTTTCAAATATAA

Protein sequence

MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQADVQDNVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI
Homology
[Close]
BLAST of Cla014666 vs. TrEMBL
Match: A0A0A0KY82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G050140 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.8e-50
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQA-DVQ 60
            MIRWWS+GSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATE   QA DVQ
Sbjct: 1435 MIRWWSVGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATERDTQAVDVQ 1494

Query: 61   DNVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
            DNVRGLSHAD LKILI SLDLSYRLEWTDERKVKLTRHGNELGTFQI
Sbjct: 1495 DNVRGLSHADILKILIQSLDLSYRLEWTDERKVKLTRHGNELGTFQI 1541

[Close]
BLAST of Cla014666 vs. TrEMBL
Match: M5WZ68_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000184mg PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 5.3e-41
Identity = 82/106 (77.36%), Postives = 91/106 (85.85%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQADVQD 60
            MIRWWSLGSV+WEKLSRN VPVQCTK+IFVPPWEGFSPNSSR SIMAS   H RQ +VQ+
Sbjct: 1401 MIRWWSLGSVFWEKLSRNLVPVQCTKLIFVPPWEGFSPNSSRSSIMASIMGHDRQVNVQE 1460

Query: 61   NVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
              +GLS AD LK+LIH+LDLSYRLEW  ERKV LTRHG+ELGTF +
Sbjct: 1461 GTKGLSQADNLKLLIHNLDLSYRLEWVGERKVLLTRHGHELGTFPL 1506

[Close]
BLAST of Cla014666 vs. TrEMBL
Match: A0A151SV26_CAJCA (WD repeat-containing protein 7 OS=Cajanus cajan GN=KK1_014066 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 7.7e-40
Identity = 78/106 (73.58%), Postives = 89/106 (83.96%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQADVQD 60
            +IRWWSLGS WWEKLSRNFVPVQCTK+IFVPPWEGFSPNSSR SIMA+  E  RQ + QD
Sbjct: 1331 LIRWWSLGSFWWEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMANILETDRQLNFQD 1390

Query: 61   NVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
            N +  +H D LK L+H+LDLSYRLEW + RKV LTRHG+ELGTFQ+
Sbjct: 1391 NAKDSNHGDCLKQLLHNLDLSYRLEWAEGRKVLLTRHGHELGTFQL 1436

[Close]
BLAST of Cla014666 vs. TrEMBL
Match: W9SJ52_9ROSA (WD repeat-containing protein 7 OS=Morus notabilis GN=L484_006701 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-39
Identity = 76/106 (71.70%), Postives = 89/106 (83.96%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQADVQD 60
            MIRWWSLGSVWWEKL+RNFVPV CTK+IFVPPWEGFSPNSSR SIM S   H +Q + QD
Sbjct: 1384 MIRWWSLGSVWWEKLTRNFVPVHCTKLIFVPPWEGFSPNSSRASIMGSIMGHDKQVNFQD 1443

Query: 61   NVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
            N++  SH D LK+LIH++DLSYRLEW  +RKV LTRHG+ELGT+ +
Sbjct: 1444 NLKVSSHPDSLKLLIHNIDLSYRLEWVGDRKVLLTRHGHELGTYPL 1489

[Close]
BLAST of Cla014666 vs. TrEMBL
Match: A0A072U5K6_MEDTR (Transducin/WD-like repeat-protein OS=Medicago truncatula GN=MTR_8g098950 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-39
Identity = 78/106 (73.58%), Postives = 90/106 (84.91%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQADVQD 60
            MIRWWSLGS W+EKLSRNFVPVQCTK+IFVPPWEGFSPNSSR SIMAS  +  +Q ++Q+
Sbjct: 1337 MIRWWSLGSFWYEKLSRNFVPVQCTKLIFVPPWEGFSPNSSRSSIMASILDTEKQLNLQN 1396

Query: 61   NVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
            N +  +H D LK L+H+LDLSYRLEW  ERKV LTRHGNELGTFQ+
Sbjct: 1397 NAKDSNHVDSLKQLLHNLDLSYRLEWVAERKVLLTRHGNELGTFQL 1442

[Close]
BLAST of Cla014666 vs. NCBI nr
Match: gi|659102195|ref|XP_008452001.1| (PREDICTED: uncharacterized protein LOC103493139 isoform X1 [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-50
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQA-DVQ 60
            MIRWWS+GSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATE H QA DVQ
Sbjct: 1392 MIRWWSVGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATERHSQAVDVQ 1451

Query: 61   DNVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
            DNVR LSHAD LKILIHSLDLSYRLEW DERKVKLTRHGNELGTFQI
Sbjct: 1452 DNVRALSHADILKILIHSLDLSYRLEWIDERKVKLTRHGNELGTFQI 1498

[Close]
BLAST of Cla014666 vs. NCBI nr
Match: gi|659102197|ref|XP_008452002.1| (PREDICTED: uncharacterized protein LOC103493139 isoform X2 [Cucumis melo])

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-50
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQA-DVQ 60
            MIRWWS+GSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATE H QA DVQ
Sbjct: 1331 MIRWWSVGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATERHSQAVDVQ 1390

Query: 61   DNVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
            DNVR LSHAD LKILIHSLDLSYRLEW DERKVKLTRHGNELGTFQI
Sbjct: 1391 DNVRALSHADILKILIHSLDLSYRLEWIDERKVKLTRHGNELGTFQI 1437

[Close]
BLAST of Cla014666 vs. NCBI nr
Match: gi|778690919|ref|XP_011653193.1| (PREDICTED: uncharacterized protein LOC101221785 isoform X1 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-50
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQA-DVQ 60
            MIRWWS+GSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATE   QA DVQ
Sbjct: 1392 MIRWWSVGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATERDTQAVDVQ 1451

Query: 61   DNVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
            DNVRGLSHAD LKILI SLDLSYRLEWTDERKVKLTRHGNELGTFQI
Sbjct: 1452 DNVRGLSHADILKILIQSLDLSYRLEWTDERKVKLTRHGNELGTFQI 1498

[Close]
BLAST of Cla014666 vs. NCBI nr
Match: gi|700198199|gb|KGN53357.1| (hypothetical protein Csa_4G050140 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-50
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQA-DVQ 60
            MIRWWS+GSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATE   QA DVQ
Sbjct: 1435 MIRWWSVGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATERDTQAVDVQ 1494

Query: 61   DNVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
            DNVRGLSHAD LKILI SLDLSYRLEWTDERKVKLTRHGNELGTFQI
Sbjct: 1495 DNVRGLSHADILKILIQSLDLSYRLEWTDERKVKLTRHGNELGTFQI 1541

[Close]
BLAST of Cla014666 vs. NCBI nr
Match: gi|764580940|ref|XP_011463926.1| (PREDICTED: uncharacterized protein LOC101292709 [Fragaria vesca subsp. vesca])

HSP 1 Score: 178.3 bits (451), Expect = 6.9e-42
Identity = 81/106 (76.42%), Postives = 93/106 (87.74%), Query Frame = 1 

Query: 1    MIRWWSLGSVWWEKLSRNFVPVQCTKVIFVPPWEGFSPNSSRLSIMASATEHHRQADVQD 60
            MIRWWSLGSVWWEKLSRN VPVQCTK+IFVPPWEGFSPNS R SIMAS   H  QA++Q+
Sbjct: 1381 MIRWWSLGSVWWEKLSRNLVPVQCTKLIFVPPWEGFSPNSMRSSIMASIMGHDGQANIQE 1440

Query: 61   NVRGLSHADFLKILIHSLDLSYRLEWTDERKVKLTRHGNELGTFQI 107
            N +GLS AD LK+LIH+L+LSY+LEW  ERKV+LTRHG+ELGTFQ+
Sbjct: 1441 NAKGLSQADNLKLLIHNLELSYQLEWVGERKVRLTRHGHELGTFQL 1486

The following BLAST results are available for this feature:
BLAST of Cla014666 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY82_CUCSA2.8e-5093.46Uncharacterized protein OS=Cucumis sativus GN=Csa_4G050140 PE=4 SV=1[more]
M5WZ68_PRUPE5.3e-4177.36Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000184mg PE=4 SV=1[more]
A0A151SV26_CAJCA7.7e-4073.58WD repeat-containing protein 7 OS=Cajanus cajan GN=KK1_014066 PE=4 SV=1[more]
W9SJ52_9ROSA1.0e-3971.70WD repeat-containing protein 7 OS=Morus notabilis GN=L484_006701 PE=4 SV=1[more]
A0A072U5K6_MEDTR1.7e-3973.58Transducin/WD-like repeat-protein OS=Medicago truncatula GN=MTR_8g098950 PE=4 SV... [more]
BLAST of Cla014666 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102195|ref|XP_008452001.1|1.1e-5093.46PREDICTED: uncharacterized protein LOC103493139 isoform X1 [Cucumis melo][more]
gi|659102197|ref|XP_008452002.1|1.1e-5093.46PREDICTED: uncharacterized protein LOC103493139 isoform X2 [Cucumis melo][more]
gi|778690919|ref|XP_011653193.1|4.0e-5093.46PREDICTED: uncharacterized protein LOC101221785 isoform X1 [Cucumis sativus][more]
gi|700198199|gb|KGN53357.1|4.0e-5093.46hypothetical protein Csa_4G050140 [Cucumis sativus][more]
gi|764580940|ref|XP_011463926.1|6.9e-4276.42PREDICTED: uncharacterized protein LOC101292709 [Fragaria vesca subsp. vesca][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006486 protein glycosylation
cellular_component GO:0005829 cytosol
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU64573watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014666Cla014666.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU64573WMU64573transcribed_cluster