Cla013551 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013551
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unconventional prefoldin RPB5 interactor (AHRD V1 -- E2AYJ7_CAMFO); contains Interpro domain(s) IPR004127 Prefoldin alpha-like
Location	Chr2 : 28130909 .. 28134656 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAGGACGAGCAAAGGGAACGGTGACGCCGTTGTCCTCTTTATTTCCGGCTCAGGATGCCCACAAGGCAGCGACGCGTGTCCAAGATGCGATTTCTGAGAAGCAGAGGGAGCTTGAGCATCTCCTCGGTTTCATCTCTGATAATGCCAACCTCATCAACCTCGTCCAGAAATTACCTGAAGAGCTTCACCACGAAGTCATGGTACTTTTGCTTCTTCCTTTGTGTTGGGTGTGATAGAAAAATAAATTTATGTTTGGTTGAGATAGTGTTGATCGTTTGATGAATTTACTTGTGGGTTCGTTGTGATTGTTGTTTTGAAGGTACCATTTGGGAAGGCGGCGTTTTTCCCAGGGCGTTTGATTCATACTAACGAGTTTCTGGTAATGTATTGAACTATCTAATAACTTGCACCTTGGAAACTTATCTTCTGTTTGATTGATAATAAGGATCAAGGTTATTATACGCCCATGAATTCATTAAGTAGATGTTCCTGTTGGTTTTCGAGTAGTAAAAGCCTATTTTAGTGGAGGACATGGGACTTGGTCCTATCGTCTTTCTTCTGTTCTGTTCACTAGCCTAATGACGCACGTTACTCTCTACGGACATCGTTAAAGCCCCTTGTACAACTTTTAACTCTGGTGCAAAATTAAGGGAAAAAGAGTGAGAGTGCATTACTGGGTTTAACAAGATCACTGTTTATGTTTGTTTTGATCACTAAATTGGAAATGTTTGTGGCCGAGTTCTGGACAGAATATTTGGGAAGGTTTTCTTTTCAAGACATCAAGTTGAGAACCAGACTTAAATCCAAGTGCAGGTTCTTCTCGGAGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATCTTGAAAAGGAGAGGCAAATCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGACAATCTTAAAGCTGAGGCCTCATTTTTTGATGCTACAGCTTCTGAAGCTGAGGTAAGTTTAGCAATCAATTGGTGAGCTATACCACAACGTGAAGTTAATAAAATTTTGTTTTTCGAAATTTTGGTGTCTTGTTCAAAGCCTTAGATTCTATTTGTTAGGTAGACGCATTTTCTCCTGTAGAGAGAGAGGGAAAGGTTGAGTGGATAAGGATTATGAGGTATACTTGGGAATTGCATTTACAGTTAAGTTTCTTGTTTGATAGGATTGAATTTTGTTTCTCTTTTAAAATAACTAGGATATAGTCTAAGTTGATGTTCTGAGAGAAATGAAGAAAAGGAGAAAGACTAATCTGGGACGTTAAAAATGGATGAAGAGCGTGAAACTGGTACTTAAGGATCTCTGCTCGACAATTTTGTTAATTGGCATTGAAATAATTGAATGGAAATTACTATTATAGTTACTCTTTCTTATTCAACAAATACTGGTTTCTAAAAAGTCTTGCACTATGACATTATTGACATGTAAAAAAAAGTTATAATAAAGTAACTCTAGTTGGCTTGAATAAAAAGGAGAAAAAAAAAGAGTAATTGCAAAGGTGTTTAGGCAATGAGCTTTACCTAGAAGCTAGAACATGTACTTTTGCTATGTTGACCAGATTATCATACACTACTGATGTTGATGTTCATTTTATATTTCTATCAGGAGGGTCTAGTCGAGATAAGGGAGGAATATGTGGAAGGAAACTTTAGTGAGCAGGAATCTGGATCAGGTTGGCTCTTATACCTTTCCTTCCTTTTGTTGCAATGTTATGTTTTGGTTGAGATTGAGACTTCATTGGTTAAGAGCTTAAGACTTCCTGGTGGCTGGTGGTATGAGTTTTCCTTCAAGTTAATCTTGGGTTGAATGTGTGAGTTAAGCTGAAATTTGACTTTTTTCCAATTTGACTCCTCATCTCCATCGTACTCTTTATGAAATTTCTCTATGAAATATCTCTGGATTGACAAGTTGACATTGTAAGACGCGTGAGGGCATGTCTACCATATTACACATATGAATAAATGTACTTAGGGGCTGTTTGGAGAGTTGGAACGTAATAGAATCACTGGGAATCAGAGGAGTATTGAAATGCATGAGGAATCGAGGACGAAACGAAAATGAGATTGTGAAGCATGAAAGTGGTGAGAAATAAGGTTGGGTTGAAAATTGTCGGAACGGAATGAGTTTTGTATTACAAATCGAGCTCAAAATGCTCAATCTAAATATTGATTTTAGATTACATTACATTACAATCTCATTCTATTACGGTCCCCCAAACACCCCCTTAGCTTTTGGAGTTGTCACCTCCTTTGTATGCATCATAATTGGGTTTGGATATTTATAAGAACTACTTGTAAGCATAGGTAAAACTGATGAATTATGATGATGTTAATGTTTCTTTTCAGGAGTAAACAAGCAAGATGTTCCTAGTGTTTCTGGAGTTGACGGGGCAAAGATTGTAGAAGAGGATGCAGAATATGCCCGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGTGACCAAAGTGATGAAGAAGATGAGGAAGAGAAAGAAACTGCAGATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAAAGGTAGTGTCAGGATTAAATGCCTTGACTTAGAGATTTAAAGCTCATTGAAACACATGGTCATCAACAAGCTTACTAGAAGGATTAGTGATGTATCATTAACCATTTCTGATGATTGCTTTCCTTGAAACTTTTTCAGGGAAGTACTTCTACGTGGCTGAGGGATGAAAATGTAGGAAGTAAAGAGCTACTGGATAAGTATCAACAACAAGAAGAGGCTTCTACCAATCCATCAAATGTGACCAAACTCTTATTTACTCATTCTTTTGCTTTTCTATCTATTACTATGTATTTTTGTTATTTAGTGAATATAATTGGTTTGCTAAAACAGCAGTCAGTCTCAAATTATGTACATTTTATCATGCAGTGTTCAGGGTTGTCGGTACAATCTTCATCCAAAGGTTAGTCTTCACCTCTTTACTTCCCTTCACTTGTCCAGTATCAATGTTATTTGCCATGTACGCGTGGCGGCATTATTTCATGTTTTATATCAGTTATAGGATGATAAACTATTCTTACCGCCATATCTTATCCATTCCAACTATACTTGTTAGAATGATTTCCCTGGTTTCCAAAAATAACATAGAATAAATGCTAAACTGGTAAAATGGTTTCTCTGTCAACTTTTCAGAAGACGTGTCAAGTGGCAAAAATTCTTTGGGTCAGACTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAACGTTCGCTGAAGTAAAAGAAAAGAATCAAAGATTGCCTCCATCTACCAGTGAGGTACTTAAAGCTTTTTTATCATATAGAACTTTTAGGTGCCCCGTTGGGCCAATATGGATTTACCCTTAATTTTGAGGTTGTTAATATCAGATAACTTCGAGGCTAGTTATAATTTTTGGCCTCATTAATCCATGTTGTATCCTTTCTCTCGGGTGTAGGCTTTCACAGGATCCATAATTGAGCGCCCTCCTGCTATACCAAAAAATTCTAAACAAGAAACAGAAACTCCATTGCAGGTGGGTTTGCTTAGTTTACGCCATTCTTATTGCCATCATCTTACTCTTTAAATCATTGATGCAATAGCTAATTACTTTTTGATTTGGCAGCCTTCTGGTTCTCAACCTTCAAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAG

mRNA sequence

ATGGAAGCAGGACGAGCAAAGGGAACGGTGACGCCGTTGTCCTCTTTATTTCCGGCTCAGGATGCCCACAAGGCAGCGACGCGTGTCCAAGATGCGATTTCTGAGAAGCAGAGGGAGCTTGAGCATCTCCTCGGTTTCATCTCTGATAATGCCAACCTCATCAACCTCGTCCAGAAATTACCTGAAGAGCTTCACCACGAAGTCATGGTACCATTTGGGAAGGCGGCGTTTTTCCCAGGGCGTTTGATTCATACTAACGAGTTTCTGGTTCTTCTCGGAGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATCTTGAAAAGGAGAGGCAAATCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGACAATCTTAAAGCTGAGGCCTCATTTTTTGATGCTACAGCTTCTGAAGCTGAGGAGGGTCTAGTCGAGATAAGGGAGGAATATGTGGAAGGAAACTTTAGTGAGCAGGAATCTGGATCAGGAGTAAACAAGCAAGATGTTCCTAGTGTTTCTGGAGTTGACGGGGCAAAGATTGTAGAAGAGGATGCAGAATATGCCCGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGTGACCAAAGTGATGAAGAAGATGAGGAAGAGAAAGAAACTGCAGATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAAAGGGAAGTACTTCTACGTGGCTGAGGGATGAAAATGTAGGAAGTAAAGAGCTACTGGATAAGTATCAACAACAAGAAGAGGCTTCTACCAATCCATCAAATTGTTCAGGGTTGTCGGTACAATCTTCATCCAAAGAAGACGTGTCAAGTGGCAAAAATTCTTTGGGTCAGACTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAACGTTCGCTGAAGTAAAAGAAAAGAATCAAAGATTGCCTCCATCTACCAGTGAGGCTTTCACAGGATCCATAATTGAGCGCCCTCCTGCTATACCAAAAAATTCTAAACAAGAAACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCTTCAAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAG

Coding sequence (CDS)

ATGGAAGCAGGACGAGCAAAGGGAACGGTGACGCCGTTGTCCTCTTTATTTCCGGCTCAGGATGCCCACAAGGCAGCGACGCGTGTCCAAGATGCGATTTCTGAGAAGCAGAGGGAGCTTGAGCATCTCCTCGGTTTCATCTCTGATAATGCCAACCTCATCAACCTCGTCCAGAAATTACCTGAAGAGCTTCACCACGAAGTCATGGTACCATTTGGGAAGGCGGCGTTTTTCCCAGGGCGTTTGATTCATACTAACGAGTTTCTGGTTCTTCTCGGAGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATCTTGAAAAGGAGAGGCAAATCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGACAATCTTAAAGCTGAGGCCTCATTTTTTGATGCTACAGCTTCTGAAGCTGAGGAGGGTCTAGTCGAGATAAGGGAGGAATATGTGGAAGGAAACTTTAGTGAGCAGGAATCTGGATCAGGAGTAAACAAGCAAGATGTTCCTAGTGTTTCTGGAGTTGACGGGGCAAAGATTGTAGAAGAGGATGCAGAATATGCCCGTATAATGTCCAGATTGGATGAACTTGAGAAGGAAGAAGAACTTGCTGCCGCAAATGGTGACCAAAGTGATGAAGAAGATGAGGAAGAGAAAGAAACTGCAGATCAATCTTTAGAGAAGTTTTATGATGATAAGCAGAGCTATTCAAAGGGAAGTACTTCTACGTGGCTGAGGGATGAAAATGTAGGAAGTAAAGAGCTACTGGATAAGTATCAACAACAAGAAGAGGCTTCTACCAATCCATCAAATTGTTCAGGGTTGTCGGTACAATCTTCATCCAAAGAAGACGTGTCAAGTGGCAAAAATTCTTTGGGTCAGACTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTGTAACGTTCGCTGAAGTAAAAGAAAAGAATCAAAGATTGCCTCCATCTACCAGTGAGGCTTTCACAGGATCCATAATTGAGCGCCCTCCTGCTATACCAAAAAATTCTAAACAAGAAACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCTTCAAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAG

Protein sequence

MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

Homology

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BLAST of Cla013551 vs. Swiss-Prot
Match: RMP_DICDI (RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideum GN=rmp PE=3 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 3.5e-24
Identity = 80/268 (29.85%), Postives = 131/268 (48.88%), Query Frame = 1


Query: 28  RVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNE 87
           + +  + E Q  +E L    +D   LI+ +Q LP+ L  ++MVP GK AFF G L +TNE
Sbjct: 9   KYEQKVVEYQDHIEELKSTKNDYKQLIDTLQHLPDTLQPKIMVPMGKLAFFEGNLKNTNE 68

Query: 88  FLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEAS----FFDATASE 147
            L+LLG+ Y+A+R+SKQT++I++RR K +D+ ++ L+  +  LK   S       A   +
Sbjct: 69  ILILLGDNYFAKRSSKQTIDIIQRRDKDIDTSINDLREQIKGLKQRVSMTTDLSKALHEK 128

Query: 148 AEEGLVEIREEYVEGNFSEQESGSGVNKQ-----DVPSVSGVDGAKIVEE-------DAE 207
             + +VEI+EEY      E+E       Q        + +  D  K  EE       D E
Sbjct: 129 EYDNIVEIKEEYNSDEEREKEKKRKQKPQKSTTTTTTTTTSKDKPKTEEEKKKSKEMDEE 188

Query: 208 YARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSL---EKFYDDKQSYSKGSTST 267
           + +++ RL  LE++E      GD  DEE+  +K      +   ++ YDD  +Y+  +   
Sbjct: 189 FDKMLKRLSILEEKEN---KMGDDYDEEEFNKKFNKKLDITGSDEEYDD-DNYNNNNDD- 248

Query: 268 WLRDENVGSKELLDKYQQQEEASTNPSN 277
              D++    +  + YQ++      P N
Sbjct: 249 ---DDDNDEDDDREYYQEEGFEDEKPEN 268

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BLAST of Cla013551 vs. Swiss-Prot
Match: RMP_HUMAN (Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens GN=URI1 PE=1 SV=3)

HSP 1 Score: 100.9 bits (250), Expect = 3.1e-20
Identity = 73/259 (28.19%), Postives = 126/259 (48.65%), Query Frame = 1


Query: 12  PLSSLFP--AQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVM 71
           P  +L P  A D  +     +  ++  Q  ++H     +D   L   +  LP++L + +M
Sbjct: 18  PAPALVPLRAPDVARLREEQEKVVTNCQERIQHWKKVDNDYNALRERLSTLPDKLSYNIM 77

Query: 72  VPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDN 131
           VPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D LK +M N
Sbjct: 78  VPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKN 137

Query: 132 LKAEASFFD--ATASEAEEGLVEIREEYVEGNFSEQESGSGVNK-QDVPSVSGVDGAKIV 191
            ++   F +     S+A   +V+IREE ++ +F  +      +K    P  S +  A I 
Sbjct: 138 FESRVEFTEDLQKMSDAAGDIVDIREE-IKCDFEFKAKHRIAHKPHSKPKTSDIFEADIA 197

Query: 192 EEDAEY-----ARIMSRLDELEKEEEL----------AAANGDQ--SDEEDEEEKETADQ 249
            +           + +RL+ELE++EEL            ANG+   S EE++E++ T   
Sbjct: 198 NDVKSKDLLADKELWARLEELERQEELLGELDSKPDTVIANGEDTTSSEEEKEDRNTNVN 257

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BLAST of Cla013551 vs. Swiss-Prot
Match: RMP_MOUSE (Unconventional prefoldin RPB5 interactor OS=Mus musculus GN=Uri1 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 7.7e-19
Identity = 65/218 (29.82%), Postives = 112/218 (51.38%), Query Frame = 1


Query: 30  QDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFL 89
           +  ++  Q +++H     +D + L   ++ LP++L ++VMVPFG  AF PG+L+HTNE  
Sbjct: 36  EKVVTNCQEKIQHWEKVDNDYSALQERLRTLPDKLSYDVMVPFGPLAFMPGKLVHTNEVT 95

Query: 90  VLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFD--ATASEAEEG 149
           VLLG+ ++A+ ++KQ V +++ R + +   +D  K ++ N ++   F +     S+A   
Sbjct: 96  VLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDFKKVLKNFESRVEFTEDLQKMSDAAGD 155

Query: 150 LVEIREEYVEGNFS-------EQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD 209
            V+IREE ++ +F          +  S     D+      +G K  +   +   + +RL+
Sbjct: 156 FVDIREE-IKSDFEFKGKQRIAHKPHSKPKTSDIFEADFENGVK-PKNTFDADELWARLE 215

Query: 210 ELEKEEEL----------AAANGDQSDEEDEEEKETAD 229
           ELE++EEL            ANG+      EEEKE AD
Sbjct: 216 ELERQEELLGELESKPDTVIANGEDR-VSSEEEKEGAD 250

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BLAST of Cla013551 vs. Swiss-Prot
Match: RMP_BOVIN (Unconventional prefoldin RPB5 interactor OS=Bos taurus GN=URI1 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-18
Identity = 64/225 (28.44%), Postives = 114/225 (50.67%), Query Frame = 1


Query: 30  QDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFL 89
           +  ++  Q +++H     +D   L   +  LP++L + +MVPFG  AF PG+L+HTNE  
Sbjct: 30  EKVVTNCQEKIQHWKKVDNDYNALQERLSTLPDKLSYNIMVPFGPFAFMPGKLVHTNEVT 89

Query: 90  VLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFD--ATASEAEEG 149
           VLLG+ ++A+ ++KQ V +++ R + +   +D LK +M N ++   F +     S+A   
Sbjct: 90  VLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGD 149

Query: 150 LVEIREEYVEGNFSEQESGSGVNK-QDVPSVSGVDGAKIVEE--------DAEYARIMSR 209
           +V+IREE ++ +F  +      +K    P  S +  A+   +        D E   +  R
Sbjct: 150 IVDIREE-IKTDFEFKAKHRIAHKPHSKPKTSDIFEAEFANDLKSKDLLADKE---LWDR 209

Query: 210 LDELEKEEEL------------AAANGDQSDEEDEEEKETADQSL 232
           L+ELE++EEL              ANG+    E+E+E +  + ++
Sbjct: 210 LEELERQEELLGEIDIDSKPDTVIANGEDVSSEEEKEDQNINVNM 250

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BLAST of Cla013551 vs. Swiss-Prot
Match: URI_DROME (Unconventional prefoldin RPB5 interactor-like protein OS=Drosophila melanogaster GN=uri PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.9e-12
Identity = 74/289 (25.61%), Postives = 124/289 (42.91%), Query Frame = 1


Query: 32  AISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVL 91
           A+     E E    F  DN + I  + K  + L  EVMVP G+ A  PG LIHTNE LV 
Sbjct: 11  ALQTNASETERWEAFKRDNESTIRNLDKFAKNLSVEVMVPIGRKALMPGELIHTNELLVG 70

Query: 92  LGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMD--NLKAEASFFDATASEAEEGLV 151
             EGY++  +S +  EI + R K  + Q+  L    D    K    F +      ++  V
Sbjct: 71  HYEGYFSACSSHKAKEICQYRLKLAEEQLKKLAVENDLWQKKLHTPFAEGAVPSGDQ--V 130

Query: 152 EIREEYVEGNFSEQESGSGVNKQDVPSVSGVD-GAKIVEEDAEYARIMSRLDELEKEEEL 211
           EI E++ E + ++  +      +       ++  A+ V++D E   ++ +L+E E  EEL
Sbjct: 131 EIVEDFNEESHNKWLAEHRKRMRQQKQKERLEREAEPVKKDNE---VLRKLEEREMMEEL 190

Query: 212 AAANGDQSDEE------DEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLD 271
              + D  DE+      ++E  ++ ++S  K    ++         W + E     E  D
Sbjct: 191 -GLDPDNIDEDQLHDMLNQEPLKSTNESSPKSLTQEE-----EDELWKKLEAEEQNE-AD 250

Query: 272 KYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQTQRVRNPNPAAK 312
           +   + E S   ++     + S   E  SS K + G  + V   +P ++
Sbjct: 251 ELSSEAEESLKTTDNLVRQLMSGETETPSSKKRTAGTNRNVEIQDPISE 287

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BLAST of Cla013551 vs. TrEMBL
Match: A0A0A0KB27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127400 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 2.8e-177
Identity = 323/375 (86.13%), Postives = 346/375 (92.27%), Query Frame = 1


Query: 1   MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKL 60
           ME+GR KGTVT L+SLFPAQDA KAA+RVQDAISEKQRELE L GFI+DN NLI LVQKL
Sbjct: 82  MESGRVKGTVTSLASLFPAQDARKAASRVQDAISEKQRELEQLRGFITDNDNLIKLVQKL 141

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT EILKRRGK+LDSQV
Sbjct: 142 PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTAEILKRRGKALDSQV 201

Query: 121 DSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGV 180
           DSLKAMMDNLKAEASFFDATASEAE+GLVEI+EEYVE NF EQES SGVNKQDVPSVSGV
Sbjct: 202 DSLKAMMDNLKAEASFFDATASEAEDGLVEIKEEYVEENFCEQESTSGVNKQDVPSVSGV 261

Query: 181 DGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQS 240
           D AKI E DAEYAR+M+R DELEKEEELAAANG++SD+EDEEEK T +QSLE+FY DKQS
Sbjct: 262 DKAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKGTQNQSLERFYGDKQS 321

Query: 241 YSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT 300
            SKGSTSTW RDENV SKELL+KYQ+Q+EASTNPSNCSGLSVQ+S KEDV+SG NSL ++
Sbjct: 322 LSKGSTSTWPRDENVSSKELLNKYQKQQEASTNPSNCSGLSVQTSPKEDVTSGNNSLTES 381

Query: 301 QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSG 360
           QRV NPNPAAKSVTFAEVKEKNQ LPPST++AFTGSIIERPP IPK SKQETET LQPSG
Sbjct: 382 QRVINPNPAAKSVTFAEVKEKNQTLPPSTNQAFTGSIIERPPIIPKTSKQETETTLQPSG 441

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 442 SQPSKPVSRFKMQRR 456

[Close]

BLAST of Cla013551 vs. TrEMBL
Match: E0CTF6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g03430 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.1e-93
Identity = 209/391 (53.45%), Postives = 255/391 (65.22%), Query Frame = 1


Query: 7   KGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHH 66
           KGTVTPL+SLFP ++A KA+ RVQDA++++Q EL+ L GFI+DN  L+NLVQ+LP+ELHH
Sbjct: 6   KGTVTPLASLFPPEEAQKASKRVQDALADRQSELDRLQGFIADNTALVNLVQRLPDELHH 65

Query: 67  EVM------------VPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGK 126
           ++M            VPFGKAAFFPGRL+HTNEFLVLLGEGYYAERTSKQTVEIL RRGK
Sbjct: 66  DIMARKNPPQPNQTVVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILDRRGK 125

Query: 127 SLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDV 186
           +L+SQVDSLKAMM +LKAE SFFDATA+EA EGLVEIRE+YVE + SE+    G  K D 
Sbjct: 126 ALESQVDSLKAMMKDLKAEVSFFDATAAEAVEGLVEIREDYVEESSSERVIERGPPKPDS 185

Query: 187 PSVSGVDGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKF 246
           P  SG D  K+  ED EYAR+M R DELEK EELAA +GD+ D EDE  +   D SL + 
Sbjct: 186 PRFSGEDSMKVAAEDEEYARMMLRFDELEK-EELAAGSGDEHD-EDEHNEADVDHSLSQL 245

Query: 247 YDDKQSYSKGSTST-----WLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSK-- 306
             D    S             +DE   ++ELL K Q  EE   N     GL  QS  K  
Sbjct: 246 SGDHVLGSLEERQVRKPLHHSKDEYATTEELLSK-QHFEEDFANQLKLEGLKEQSVPKDS 305

Query: 307 EDVSSGK---NSLGQTQRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAI 366
           +DVS GK   N   Q+      N  A   + AE   ++ +    + +AFTGSI+E    I
Sbjct: 306 DDVSHGKSFANRATQSSSHGKDNIQALPTSKAETSVQSSKPATDSLKAFTGSIVEHTRNI 365

Query: 367 PKNSKQETETPLQPSGSQPSKPVSRFKMQRR 376
             N +++  +  Q SGSQP+KPVSRFKMQRR
Sbjct: 366 QMNPREQAASSSQSSGSQPTKPVSRFKMQRR 393

[Close]

BLAST of Cla013551 vs. TrEMBL
Match: V4U8Q6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015278mg PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.3e-93
Identity = 214/406 (52.71%), Postives = 262/406 (64.53%), Query Frame = 1


Query: 1   MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKL 60
           ME   AKGTVT +SS+FP  D  KAA RVQDA+SEKQ+ELE +  FISDN NLINLVQKL
Sbjct: 38  MEEPTAKGTVTSISSMFPVDDVQKAAKRVQDALSEKQQELERVKEFISDNTNLINLVQKL 97

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQV 120
           PEELHH++MVPFGKAAFFPGRLIHTNEF+VLLGEGYYAERTSKQTVEILKRRGK LDSQV
Sbjct: 98  PEELHHDIMVPFGKAAFFPGRLIHTNEFMVLLGEGYYAERTSKQTVEILKRRGKVLDSQV 157

Query: 121 DSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGV 180
           DSLKAMM +L+AEASFFD TASEA EGLVEIREEY E N SE+ S SG+ KQD   +S  
Sbjct: 158 DSLKAMMKDLQAEASFFDTTASEAAEGLVEIREEYGEENLSERTSESGLLKQDSSRLSEA 217

Query: 181 DGAKIVEEDAEYARIMSRLDELEKEE-----ELAAANGDQS-----------DEEDE-EE 240
           D  K  +ED  YARIMSRLDELEKEE     E  +A   Q+           DE++E EE
Sbjct: 218 DNLK--DEDELYARIMSRLDELEKEELAWEIENGSAESKQNNVAKSDNAKYGDEDNELEE 277

Query: 241 KETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTN--PSNCSGLS 300
            E A ++  +  ++KQ+ + GS +    DE   +  + D++  Q     N   S C+GL+
Sbjct: 278 AELAAETENRSDENKQNNAAGSDNENNEDEQANT--VSDQFSNQISLDHNLRHSECTGLT 337

Query: 301 VQSSSKEDVSSGKNSLGQTQRV------------RNPNPAAKSVTFAEVKEKNQRLPPST 360
           VQ ++ ED      SL     V            +  N A   ++  E+  +  +     
Sbjct: 338 VQ-AALEDAKPRTKSLATNVNVEANSAEKALVLPKEDNVATAPLSIQEISAQASKPEFDR 397

Query: 361 SEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR 376
            +AFT SIIE    +  + +++     +PSGSQ SKPVSRFKMQR+
Sbjct: 398 YKAFTESIIEHNYNLQTDQQEQIRNTSKPSGSQSSKPVSRFKMQRK 438

[Close]

BLAST of Cla013551 vs. TrEMBL
Match: A0A059DGM5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01831 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 5.8e-90
Identity = 201/389 (51.67%), Postives = 250/389 (64.27%), Query Frame = 1


Query: 1   MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKL 60
           ME G A GTVTPL+S+FPA +A KAA RVQDAI+EK+REL+ + GF +DNA L+NLVQKL
Sbjct: 1   MEEG-ANGTVTPLASMFPADEAQKAAGRVQDAIAEKRRELDRVRGFAADNAALVNLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQV 120
           PEELHH+VMVPFGKAAFFPGRLIHTNEF VLLGEGYYAERTSKQTVEILKRRGK+L++ V
Sbjct: 61  PEELHHDVMVPFGKAAFFPGRLIHTNEFTVLLGEGYYAERTSKQTVEILKRRGKALETHV 120

Query: 121 DSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGV 180
           DSLK+++++LK EASFFD TASEA EGLVEIREE + G  S++ S     K+D PS+S  
Sbjct: 121 DSLKSIIEDLKTEASFFDKTASEAAEGLVEIREE-LSGEESDEGSSELGQKEDAPSISAE 180

Query: 181 DGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDD-KQ 240
           D  KI+ ED EY R+MS+LDELEK EELAA   D  +EE  E           F+ + K 
Sbjct: 181 DKGKILNEDEEYDRLMSKLDELEK-EELAAEAADNIEEETNEVDPDVVSDQSSFHQNLKD 240

Query: 241 SYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQ 300
                S       E   S E   +  +Q+       N S  ++ SS K+  S G + L  
Sbjct: 241 LEGSHSCMPPSHSERQASNEEFLRQTRQQPTLVEKLNPSDFTIASSQKDKTSHGNDPL-- 300

Query: 301 TQRVRNPNPAAKSVTFAEVKE------KNQRLP-------PSTSEAFTGSIIERPPAIPK 360
              ++ PN A KS     ++E       N  +P         +  AFTGSIIE  P +P 
Sbjct: 301 -WNLKGPNIADKSPKLPALEENDHAGSSNNEVPIQPPKPKVDSLRAFTGSIIEHSPNLPI 360

Query: 361 NSKQETETPLQPSGSQPSKPVSRFKMQRR 376
           N  + + T  +  GSQ SKP+SRF+MQR+
Sbjct: 361 NPGEPSATSSKVPGSQSSKPLSRFRMQRK 383

[Close]

BLAST of Cla013551 vs. TrEMBL
Match: A0A0D2NGY1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G019600 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 9.9e-90
Identity = 199/393 (50.64%), Postives = 259/393 (65.90%), Query Frame = 1


Query: 1   MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKL 60
           M     KG VT LSS+FPA++  KAA  V++ +SEKQ E+  L  FI+DN +LINLVQKL
Sbjct: 1   MGKSEVKGMVTSLSSMFPAEEVQKAAKMVEEKLSEKQNEMNQLKEFIADNTSLINLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQV 120
           P+ELHH++MVPFGKAAFFPGRLIHTNEFLVLLGE YY ERT+KQTVEILKRRGKSL+S+V
Sbjct: 61  PDELHHDIMVPFGKAAFFPGRLIHTNEFLVLLGESYYTERTAKQTVEILKRRGKSLESKV 120

Query: 121 DSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGV 180
           D+LKA+M +LKAEASFFD+TASEA EGLVEIR EY E N +E+ S SG  + + PSV+  
Sbjct: 121 DALKAVMQDLKAEASFFDSTASEAAEGLVEIR-EYEEDNSTERASQSGSLELETPSVAEA 180

Query: 181 DGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEE----EKETADQSLEK--- 240
           D      ED EY RIMSRL+ELEKEE  A  N +  ++EDE+    E ++ +  L K   
Sbjct: 181 DNKMGASEDDEYERIMSRLEELEKEELAAEDNEENLEDEDEDANAVESDSNEDELTKAAF 240

Query: 241 ---------FYDDKQSYSKGSTSTWLRDENVGS--KELLDKYQQQEEASTNPSNCSGLSV 300
                    + D  Q YS+  +   L+  N     +E+ DKY+ Q+   TN    +GL+ 
Sbjct: 241 HRKKDECYSYLDHGQRYSESQSRKQLQQFNGKEPIEEMSDKYKHQD--LTNQFASTGLTE 300

Query: 301 QSSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPP 360
           +  +K ++S G+  + Q  +  +P+  A S  F +   +  +    +S+AFTGSI+E   
Sbjct: 301 EPVTKGEISHGR-IIQQDTKTLSPSINA-SAPFEKKSVQTSKTEFDSSKAFTGSIVEHTQ 360

Query: 361 AIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR 376
            + K+S     T LQ SGSQPSKPVSRFKMQR+
Sbjct: 361 NLDKSSVGTNTTSLQSSGSQPSKPVSRFKMQRK 388

[Close]

BLAST of Cla013551 vs. NCBI nr
Match: gi|659094920|ref|XP_008448307.1| (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cucumis melo])

HSP 1 Score: 633.6 bits (1633), Expect = 2.1e-178
Identity = 325/375 (86.67%), Postives = 345/375 (92.00%), Query Frame = 1


Query: 1   MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKL 60
           MEAGR KGTVTPLSSLFPAQDA KAA+RVQ AISE Q++LE L GFI+DN N+I LVQKL
Sbjct: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGK+LDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120

Query: 121 DSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGV 180
           DSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVE NF EQE  SGVNKQDV  VSGV
Sbjct: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTSGVNKQDVTRVSGV 180

Query: 181 DGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQS 240
           D AKI E DAEYAR+M+R DELEKEEELAAANG++SD+EDEEEKET +QSLEKFYDDKQS
Sbjct: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240

Query: 241 YSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT 300
           YS+GSTS WLRDENV SKELLDKYQ+Q+EASTNPSNCSGLSVQSS KEDV+SG +SL Q+
Sbjct: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300

Query: 301 QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSG 360
           QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPK SKQETETPLQPSG
Sbjct: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 375

[Close]

BLAST of Cla013551 vs. NCBI nr
Match: gi|449444368|ref|XP_004139947.1| (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog [Cucumis sativus])

HSP 1 Score: 629.4 bits (1622), Expect = 4.0e-177
Identity = 323/375 (86.13%), Postives = 346/375 (92.27%), Query Frame = 1


Query: 1   MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKL 60
           ME+GR KGTVT L+SLFPAQDA KAA+RVQDAISEKQRELE L GFI+DN NLI LVQKL
Sbjct: 1   MESGRVKGTVTSLASLFPAQDARKAASRVQDAISEKQRELEQLRGFITDNDNLIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT EILKRRGK+LDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTAEILKRRGKALDSQV 120

Query: 121 DSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGV 180
           DSLKAMMDNLKAEASFFDATASEAE+GLVEI+EEYVE NF EQES SGVNKQDVPSVSGV
Sbjct: 121 DSLKAMMDNLKAEASFFDATASEAEDGLVEIKEEYVEENFCEQESTSGVNKQDVPSVSGV 180

Query: 181 DGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQS 240
           D AKI E DAEYAR+M+R DELEKEEELAAANG++SD+EDEEEK T +QSLE+FY DKQS
Sbjct: 181 DKAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKGTQNQSLERFYGDKQS 240

Query: 241 YSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT 300
            SKGSTSTW RDENV SKELL+KYQ+Q+EASTNPSNCSGLSVQ+S KEDV+SG NSL ++
Sbjct: 241 LSKGSTSTWPRDENVSSKELLNKYQKQQEASTNPSNCSGLSVQTSPKEDVTSGNNSLTES 300

Query: 301 QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSG 360
           QRV NPNPAAKSVTFAEVKEKNQ LPPST++AFTGSIIERPP IPK SKQETET LQPSG
Sbjct: 301 QRVINPNPAAKSVTFAEVKEKNQTLPPSTNQAFTGSIIERPPIIPKTSKQETETTLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 375

[Close]

BLAST of Cla013551 vs. NCBI nr
Match: gi|700191524|gb|KGN46728.1| (hypothetical protein Csa_6G127400 [Cucumis sativus])

HSP 1 Score: 629.4 bits (1622), Expect = 4.0e-177
Identity = 323/375 (86.13%), Postives = 346/375 (92.27%), Query Frame = 1


Query: 1   MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKL 60
           ME+GR KGTVT L+SLFPAQDA KAA+RVQDAISEKQRELE L GFI+DN NLI LVQKL
Sbjct: 82  MESGRVKGTVTSLASLFPAQDARKAASRVQDAISEKQRELEQLRGFITDNDNLIKLVQKL 141

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT EILKRRGK+LDSQV
Sbjct: 142 PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTAEILKRRGKALDSQV 201

Query: 121 DSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGV 180
           DSLKAMMDNLKAEASFFDATASEAE+GLVEI+EEYVE NF EQES SGVNKQDVPSVSGV
Sbjct: 202 DSLKAMMDNLKAEASFFDATASEAEDGLVEIKEEYVEENFCEQESTSGVNKQDVPSVSGV 261

Query: 181 DGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQS 240
           D AKI E DAEYAR+M+R DELEKEEELAAANG++SD+EDEEEK T +QSLE+FY DKQS
Sbjct: 262 DKAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKGTQNQSLERFYGDKQS 321

Query: 241 YSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT 300
            SKGSTSTW RDENV SKELL+KYQ+Q+EASTNPSNCSGLSVQ+S KEDV+SG NSL ++
Sbjct: 322 LSKGSTSTWPRDENVSSKELLNKYQKQQEASTNPSNCSGLSVQTSPKEDVTSGNNSLTES 381

Query: 301 QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSG 360
           QRV NPNPAAKSVTFAEVKEKNQ LPPST++AFTGSIIERPP IPK SKQETET LQPSG
Sbjct: 382 QRVINPNPAAKSVTFAEVKEKNQTLPPSTNQAFTGSIIERPPIIPKTSKQETETTLQPSG 441

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 442 SQPSKPVSRFKMQRR 456

[Close]

BLAST of Cla013551 vs. NCBI nr
Match: gi|659094922|ref|XP_008448308.1| (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis melo])

HSP 1 Score: 626.7 bits (1615), Expect = 2.6e-176
Identity = 324/375 (86.40%), Postives = 344/375 (91.73%), Query Frame = 1


Query: 1   MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKL 60
           MEAGR KGTVTPLSSLFPAQDA KAA+RVQ AISE Q++LE L GFI+DN N+I LVQKL
Sbjct: 1   MEAGRVKGTVTPLSSLFPAQDARKAASRVQAAISENQKKLEQLQGFITDNENMIKLVQKL 60

Query: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQV 120
           PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGK+LDSQV
Sbjct: 61  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKALDSQV 120

Query: 121 DSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGV 180
           DSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVE NF EQE  S VNKQDV  VSGV
Sbjct: 121 DSLKATMDNLKAEASFFDATASEAEEGLVEIKEEYVEENFCEQELTS-VNKQDVTRVSGV 180

Query: 181 DGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQS 240
           D AKI E DAEYAR+M+R DELEKEEELAAANG++SD+EDEEEKET +QSLEKFYDDKQS
Sbjct: 181 DEAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKETPNQSLEKFYDDKQS 240

Query: 241 YSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT 300
           YS+GSTS WLRDENV SKELLDKYQ+Q+EASTNPSNCSGLSVQSS KEDV+SG +SL Q+
Sbjct: 241 YSEGSTSAWLRDENVSSKELLDKYQKQQEASTNPSNCSGLSVQSSPKEDVTSGNSSLTQS 300

Query: 301 QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSG 360
           QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPK SKQETETPLQPSG
Sbjct: 301 QRVRNPNPAAKSVKFAEVKEKTQTLPPSTSQAFTGSIIERPPIIPKTSKQETETPLQPSG 360

Query: 361 SQPSKPVSRFKMQRR 376
           SQPSKPVSRFKMQRR
Sbjct: 361 SQPSKPVSRFKMQRR 374

[Close]

BLAST of Cla013551 vs. NCBI nr
Match: gi|731408803|ref|XP_010656985.1| (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Vitis vinifera])

HSP 1 Score: 361.3 bits (926), Expect = 2.0e-96
Identity = 206/380 (54.21%), Postives = 256/380 (67.37%), Query Frame = 1


Query: 7   KGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHH 66
           KGTVTPL+SLFP ++A KA+ RVQDA++++Q EL+ L GFI+DN  L+NLVQ+LP+ELHH
Sbjct: 6   KGTVTPLASLFPPEEAQKASKRVQDALADRQSELDRLQGFIADNTALVNLVQRLPDELHH 65

Query: 67  EVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAM 126
           ++MVPFGKAAFFPGRL+HTNEFLVLLGEGYYAERTSKQTVEIL RRGK+L+SQVDSLKAM
Sbjct: 66  DIMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILDRRGKALESQVDSLKAM 125

Query: 127 MDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIV 186
           M +LKAE SFFDATA+EA EGLVEIRE+YVE + SE+    G  K D P  SG D  K+ 
Sbjct: 126 MKDLKAEVSFFDATAAEAVEGLVEIREDYVEESSSERVIERGPPKPDSPRFSGEDSMKVA 185

Query: 187 EEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGST 246
            ED EYAR+M R DELEK EELAA +GD+ D EDE  +   D SL +   D    S    
Sbjct: 186 AEDEEYARMMLRFDELEK-EELAAGSGDEHD-EDEHNEADVDHSLSQLSGDHVLGSLEER 245

Query: 247 ST-----WLRDENVGSKELLDKYQQQEEAST---NPSNCSGLSVQSSSKEDVSSGK---N 306
                    +DE   ++ELL K   +E+ +    +     GL  QS  K+DVS GK   N
Sbjct: 246 QVRKPLHHSKDEYATTEELLSKQHFEEDFANQLKSKIQLEGLKEQSVPKDDVSHGKSFAN 305

Query: 307 SLGQTQRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETP 366
              Q+      N  A   + AE   ++ +    + +AFTGSI+E    I  N +++  + 
Sbjct: 306 RATQSSSHGKDNIQALPTSKAETSVQSSKPATDSLKAFTGSIVEHTRNIQMNPREQAASS 365

Query: 367 LQPSGSQPSKPVSRFKMQRR 376
            Q SGSQP+KPVSRFKMQRR
Sbjct: 366 SQSSGSQPTKPVSRFKMQRR 383

The following BLAST results are available for this feature:

BLAST of Cla013551 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RMP_DICDI	3.5e-24	29.85	RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideu...	[more]
RMP_HUMAN	3.1e-20	28.19	Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens GN=URI1 PE=1 SV=3	[more]
RMP_MOUSE	7.7e-19	29.82	Unconventional prefoldin RPB5 interactor OS=Mus musculus GN=Uri1 PE=1 SV=2	[more]
RMP_BOVIN	1.0e-18	28.44	Unconventional prefoldin RPB5 interactor OS=Bos taurus GN=URI1 PE=2 SV=1	[more]
URI_DROME	6.9e-12	25.61	Unconventional prefoldin RPB5 interactor-like protein OS=Drosophila melanogaster...	[more]

BLAST of Cla013551 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB27_CUCSA	2.8e-177	86.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127400 PE=4 SV=1	[more]
E0CTF6_VITVI	1.1e-93	53.45	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g03430 PE=4 SV=...	[more]
V4U8Q6_9ROSI	3.3e-93	52.71	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015278mg PE=4 SV=1	[more]
A0A059DGM5_EUCGR	5.8e-90	51.67	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01831 PE=4 SV=1	[more]
A0A0D2NGY1_GOSRA	9.9e-90	50.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G019600 PE=4 SV=1	[more]

BLAST of Cla013551 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094920\|ref\|XP_008448307.1\|	2.1e-178	86.67	PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cuc...	[more]
gi\|449444368\|ref\|XP_004139947.1\|	4.0e-177	86.13	PREDICTED: RNA polymerase II subunit 5-mediating protein homolog [Cucumis sativu...	[more]
gi\|700191524\|gb\|KGN46728.1\|	4.0e-177	86.13	hypothetical protein Csa_6G127400 [Cucumis sativus]	[more]
gi\|659094922\|ref\|XP_008448308.1\|	2.6e-176	86.40	PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cuc...	[more]
gi\|731408803\|ref\|XP_010656985.1\|	2.0e-96	54.21	PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Vit...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004127	Prefoldin_subunit_alpha
IPR009053	Prefoldin
IPR011599	PFD_alpha_archaea

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016272	prefoldin complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0051082	unfolded protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0010923	negative regulation of phosphatase activity
biological_process	GO:0000122	negative regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0019212	phosphatase inhibitor activity
molecular_function	GO:0003714	transcription corepressor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla013551	Cla013551.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 30..143 score: 2.2
IPR009053	Prefoldin	GENE3D	G3DSA:1.10.287.370		coord: 26..141 score: 1.4
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 28..137 score: 2.88
IPR011599	Prefoldin alpha subunit, archaea-type	TIGRFAMs	TIGR00293	TIGR00293	coord: 24..142 score: 1.0
None	No IPR available	unknown	Coil	Coil	coord: 185..212 score: -coord: 113..133 scor
None	No IPR available	PANTHER	PTHR15111	RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3	coord: 2..372 score: 4.9
None	No IPR available	PANTHER	PTHR15111:SF0	UNCONVENTIONAL PREFOLDIN RPB5 INTERACTOR 1	coord: 2..372 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla013551	Cla97C02G043510	Watermelon (97103) v2	wmwmbB316
Cla013551	Csa6G127400	Cucumber (Chinese Long) v2	cuwmB527
Cla013551	MELO3C013631	Melon (DHL92) v3.5.1	mewmB109
Cla013551	ClCG02G017750	Watermelon (Charleston Gray)	wcgwmB197
Cla013551	CSPI06G10320	Wild cucumber (PI 183967)	cpiwmB545
Cla013551	Cucsa.119220	Cucumber (Gy14) v1	cgywmB183
Cla013551	CmaCh20G002070	Cucurbita maxima (Rimu)	cmawmB524
Cla013551	CmoCh20G002270	Cucurbita moschata (Rifu)	cmowmB513
Cla013551	Lsi10G016070	Bottle gourd (USVL1VR-Ls)	lsiwmB078
Cla013551	Cp4.1LG16g07690	Cucurbita pepo (Zucchini)	cpewmB303
Cla013551	CsGy6G010410	Cucumber (Gy14) v2	cgybwmB490
Cla013551	MELO3C013631.2	Melon (DHL92) v3.6.1	medwmB108
Cla013551	Carg18460	Silver-seed gourd	carwmB0412
Cla013551	CsaV3_6G012810	Cucumber (Chinese Long) v3	cucwmB550
Cla013551	Bhi10G000847	Wax gourd	wgowmB396

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla013551	Cucurbita maxima (Rimu)	cmawmB125
Cla013551	Cucurbita maxima (Rimu)	cmawmB500
Cla013551	Cucurbita maxima (Rimu)	cmawmB593
Cla013551	Cucurbita moschata (Rifu)	cmowmB112
Cla013551	Cucurbita moschata (Rifu)	cmowmB199
Cla013551	Cucurbita moschata (Rifu)	cmowmB493
Cla013551	Cucurbita moschata (Rifu)	cmowmB586
Cla013551	Melon (DHL92) v3.5.1	mewmB132
Cla013551	Melon (DHL92) v3.5.1	mewmB248
Cla013551	Watermelon (Charleston Gray)	wcgwmB388
Cla013551	Cucumber (Chinese Long) v2	cuwmB598
Cla013551	Cucurbita pepo (Zucchini)	cpewmB054
Cla013551	Cucurbita pepo (Zucchini)	cpewmB265
Cla013551	Cucurbita pepo (Zucchini)	cpewmB668
Cla013551	Cucurbita pepo (Zucchini)	cpewmB724
Cla013551	Cucumber (Gy14) v2	cgybwmB561
Cla013551	Melon (DHL92) v3.6.1	medwmB126
Cla013551	Melon (DHL92) v3.6.1	medwmB239
Cla013551	Silver-seed gourd	carwmB0030
Cla013551	Silver-seed gourd	carwmB0719
Cla013551	Cucumber (Chinese Long) v3	cucwmB627
Cla013551	Watermelon (97103) v2	wmwmbB347
Cla013551	Wax gourd	wgowmB277
Cla013551	Watermelon (97103) v1	wmwmB109