Cla012934 (gene) Watermelon (97103) v1

Overview
NameCla012934
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- D7M078_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr9 : 21269725 .. 21271053 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCTTAAAGGGTATTGTCCCAGTTCATTCTCCTTCAACAATGTATTGGGTTTACTTGCTAAATCAGGCAATTTGGATAGAACTTGGTGGTTCTTCACTGAATTTCTGGGGAGGACTCACTTTGATGTGTATAGTTTTGGGATAACGATTAAAGCCTTTTGCGAAAATGGCAATGTAAGTCAAGGTTTTGAGCTTTTGGCTCAAATGGAGAGGATGGGCATGTCTCCAAATGTTGTTATATACACTATCTTGATTGATGCTTGTTCCAAAAATGGTGACATTGAACAGGCTAAAGTATTGTTTTCTAAGATGGATGATCTTGGTTTGGTTGCTAACCAATATACTTATACTGTCATGATCAATGGATTTTTCAAGAAAGGTTATAAGAAAGATGGTTTTGAGCTTTATGAGAAGATGAAGCTTGTTGGGGTGTTTCCTAGTTTATATACTTACAACAGTCTTATTAATGAATATTGTAAGGATGGGAAGTTGAGCATTGCATTTAAGTTGTTTAATGAAATGTCTACAAGAGGGGTTTCATGTAATGTAGTCACATATAATATTCTAATTGGTGGGTTATGTCGTAAGAGACAAGTGTCAAAAGCTGAACGGCTATTAGAAGAAATGAAACAAGCTCATATAAATCCAACTATTAGAACATTTAACCTGTTGATGGATGGGTTGTGTAATACTGGAAAGTTGGACAAGGCCTTAAGTTATTTTGAGAAGCTGAAGTTGATTGGTCAGTCTCCAACTTCAGTGACCTACAACATTTTGATTGCAGGTTTCTCTAAAGCAGGAAATTCTTTTGTAGTTTCTGAGTTAGTGAGAGAGATGGAGGACAGAGGCATTTCTCCCTCCAAAGTTACATATACAATTCTGATGGATGCATTTGTCCGATCTGATGATGTCGAAAAAGCCTATCAGATGTTTCATCTCATGAAGAGAATTGGTTCGGTCCCAGATCAGCATACGTATGGTGTCCTAATCCATGGTTTGTGTATGAAAGGTAATATGGTAGAGGCATCAAAACTGTACAAATCAATGGTAGAGATGCATTTGGAGCCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAAGAATGCAATTCTTACAAGGCCTTAAAATTTCTTGAAGAGATGATTAAAAAAGGAGTAACTCCAAGTCTGGCTAGTTACGGTTTCACCATTGAAGTCCTTTGCAATGAAGGGAAGTCGACCGAGGCGAAACATTTACTTAAAGAGATGATCGAAGCTGGGTTGAAGCCATCAGAATCTCTCTGTAGTAAAGTTGGTTATGCCAAATCCTGTGCATAA

mRNA sequence

ATGGTCCTTAAAGGGTATTGTCCCAGTTCATTCTCCTTCAACAATGTATTGGGTTTACTTGCTAAATCAGGCAATTTGGATAGAACTTGGTGGTTCTTCACTGAATTTCTGGGGAGGACTCACTTTGATGTGTATAGTTTTGGGATAACGATTAAAGCCTTTTGCGAAAATGGCAATGTAAGTCAAGGTTTTGAGCTTTTGGCTCAAATGGAGAGGATGGGCATGTCTCCAAATGTTGTTATATACACTATCTTGATTGATGCTTGTTCCAAAAATGGTGACATTGAACAGGCTAAAGTATTGTTTTCTAAGATGGATGATCTTGGTTTGGTTGCTAACCAATATACTTATACTGTCATGATCAATGGATTTTTCAAGAAAGGTTATAAGAAAGATGGTTTTGAGCTTTATGAGAAGATGAAGCTTGTTGGGGTGTTTCCTAGTTTATATACTTACAACAGTCTTATTAATGAATATTGTAAGGATGGGAAGTTGAGCATTGCATTTAAGTTGTTTAATGAAATGTCTACAAGAGGGGTTTCATGTAATGTAGTCACATATAATATTCTAATTGGTGGGTTATGTCGTAAGAGACAAGTGTCAAAAGCTGAACGGCTATTAGAAGAAATGAAACAAGCTCATATAAATCCAACTATTAGAACATTTAACCTGTTGATGGATGGGTTGTGTAATACTGGAAAGTTGGACAAGGCCTTAAGTTATTTTGAGAAGCTGAAGTTGATTGGTCAGTCTCCAACTTCAGTGACCTACAACATTTTGATTGCAGGTTTCTCTAAAGCAGGAAATTCTTTTGTAGTTTCTGAGTTAGTGAGAGAGATGGAGGACAGAGGCATTTCTCCCTCCAAAGTTACATATACAATTCTGATGGATGCATTTGTCCGATCTGATGATGTCGAAAAAGCCTATCAGATGTTTCATCTCATGAAGAGAATTGGTTCGGTCCCAGATCAGCATACGTATGGTGTCCTAATCCATGGTTTGTGTATGAAAGGTAATATGGTAGAGGCATCAAAACTGTACAAATCAATGGTAGAGATGCATTTGGAGCCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAAGAATGCAATTCTTACAAGGCCTTAAAATTTCTTGAAGAGATGATTAAAAAAGGAGTAACTCCAAGTCTGGCTAGTTACGGTTTCACCATTGAAGTCCTTTGCAATGAAGGGAAGTCGACCGAGGCGAAACATTTACTTAAAGAGATGATCGAAGCTGGGTTGAAGCCATCAGAATCTCTCTGTAGTAAAGTTGGTTATGCCAAATCCTGTGCATAA

Coding sequence (CDS)

ATGGTCCTTAAAGGGTATTGTCCCAGTTCATTCTCCTTCAACAATGTATTGGGTTTACTTGCTAAATCAGGCAATTTGGATAGAACTTGGTGGTTCTTCACTGAATTTCTGGGGAGGACTCACTTTGATGTGTATAGTTTTGGGATAACGATTAAAGCCTTTTGCGAAAATGGCAATGTAAGTCAAGGTTTTGAGCTTTTGGCTCAAATGGAGAGGATGGGCATGTCTCCAAATGTTGTTATATACACTATCTTGATTGATGCTTGTTCCAAAAATGGTGACATTGAACAGGCTAAAGTATTGTTTTCTAAGATGGATGATCTTGGTTTGGTTGCTAACCAATATACTTATACTGTCATGATCAATGGATTTTTCAAGAAAGGTTATAAGAAAGATGGTTTTGAGCTTTATGAGAAGATGAAGCTTGTTGGGGTGTTTCCTAGTTTATATACTTACAACAGTCTTATTAATGAATATTGTAAGGATGGGAAGTTGAGCATTGCATTTAAGTTGTTTAATGAAATGTCTACAAGAGGGGTTTCATGTAATGTAGTCACATATAATATTCTAATTGGTGGGTTATGTCGTAAGAGACAAGTGTCAAAAGCTGAACGGCTATTAGAAGAAATGAAACAAGCTCATATAAATCCAACTATTAGAACATTTAACCTGTTGATGGATGGGTTGTGTAATACTGGAAAGTTGGACAAGGCCTTAAGTTATTTTGAGAAGCTGAAGTTGATTGGTCAGTCTCCAACTTCAGTGACCTACAACATTTTGATTGCAGGTTTCTCTAAAGCAGGAAATTCTTTTGTAGTTTCTGAGTTAGTGAGAGAGATGGAGGACAGAGGCATTTCTCCCTCCAAAGTTACATATACAATTCTGATGGATGCATTTGTCCGATCTGATGATGTCGAAAAAGCCTATCAGATGTTTCATCTCATGAAGAGAATTGGTTCGGTCCCAGATCAGCATACGTATGGTGTCCTAATCCATGGTTTGTGTATGAAAGGTAATATGGTAGAGGCATCAAAACTGTACAAATCAATGGTAGAGATGCATTTGGAGCCTAATGATGTTATCTATAATACAATGATAAATGGGTACTGCAAAGAATGCAATTCTTACAAGGCCTTAAAATTTCTTGAAGAGATGATTAAAAAAGGAGTAACTCCAAGTCTGGCTAGTTACGGTTTCACCATTGAAGTCCTTTGCAATGAAGGGAAGTCGACCGAGGCGAAACATTTACTTAAAGAGATGATCGAAGCTGGGTTGAAGCCATCAGAATCTCTCTGTAGTAAAGTTGGTTATGCCAAATCCTGTGCATAA

Protein sequence

MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNVSQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVMINGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGVSCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALSYFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFVRSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEMIEAGLKPSESLCSKVGYAKSCA
Homology
[Close]
BLAST of Cla012934 vs. Swiss-Prot
Match: PP306_ARATH (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 5.1e-139
Identity = 243/440 (55.23%), Postives = 322/440 (73.18%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           MV  G+ P S  FN +L  +  S + ++ W FF E   +   DVYSFGI IK  CE G +
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEI 179

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
            + F+LL ++   G SPNVVIYT LID C K G+IE+AK LF +M  LGLVAN+ TYTV+
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           ING FK G KK GFE+YEKM+  GVFP+LYTYN ++N+ CKDG+   AF++F+EM  RGV
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           SCN+VTYN LIGGLCR+ ++++A +++++MK   INP + T+N L+DG C  GKL KALS
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
               LK  G SP+ VTYNIL++GF + G++   +++V+EME+RGI PSKVTYTIL+D F 
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           RSD++EKA Q+   M+ +G VPD HTY VLIHG C+KG M EAS+L+KSMVE + EPN+V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           IYNTMI GYCKE +SY+ALK L+EM +K + P++ASY + IEVLC E KS EA+ L+++M
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539

Query: 421 IEAGLKPSESLCSKVGYAKS 441
           I++G+ PS S+ S +  AK+
Sbjct: 540 IDSGIDPSTSILSLISRAKN 559

[Close]
BLAST of Cla012934 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.3e-62
Identity = 134/433 (30.95%), Postives = 222/433 (51.27%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHF--DVYSFGITIKAFCENG 60
           M LKGY P   S++ V+    + G LD+ W    E + R     + Y +G  I   C   
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLI-EVMKRKGLKPNSYIYGSIIGLLCRIC 331

Query: 61  NVSQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYT 120
            +++  E  ++M R G+ P+ V+YT LID   K GDI  A   F +M    +  +  TYT
Sbjct: 332 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 391

Query: 121 VMINGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTR 180
            +I+GF + G   +  +L+ +M   G+ P   T+  LIN YCK G +  AF++ N M   
Sbjct: 392 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 451

Query: 181 GVSCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKA 240
           G S NVVTY  LI GLC++  +  A  LL EM +  + P I T+N +++GLC +G +++A
Sbjct: 452 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 511

Query: 241 LSYFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDA 300
           +    + +  G +  +VTY  L+  + K+G      E+++EM  +G+ P+ VT+ +LM+ 
Sbjct: 512 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 571

Query: 301 FVRSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPN 360
           F     +E   ++ + M   G  P+  T+  L+   C++ N+  A+ +YK M    + P+
Sbjct: 572 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 631

Query: 361 DVIYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLK 420
              Y  ++ G+CK  N  +A    +EM  KG + S+++Y   I+      K  EA+ +  
Sbjct: 632 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 691

Query: 421 EMIEAGLKPSESL 432
           +M   GL   + +
Sbjct: 692 QMRREGLAADKEI 703


HSP 2 Score: 189.5 bits (480), Expect = 7.8e-47
Identity = 106/383 (27.68%), Postives = 200/383 (52.22%), Query Frame = 1 

Query: 47  FGITIKAFCENGNVSQGFELLAQMERMGMSPNVVIYTILIDACSKNG-DIEQAKVLFSKM 106
           F +  +   + G + +   +  +M   G+  +V    + +   SK+      A ++F + 
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237

Query: 107 DDLGLVANQYTYTVMINGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKL 166
            ++G+  N  +Y ++I+   + G  K+   L   M+L G  P + +Y++++N YC+ G+L
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297

Query: 167 SIAFKLFNEMSTRGVSCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLL 226
              +KL   M  +G+  N   Y  +IG LCR  ++++AE    EM +  I P    +  L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357

Query: 227 MDGLCNTGKLDKALSYFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGI 286
           +DG C  G +  A  +F ++     +P  +TY  +I+GF + G+     +L  EM  +G+
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417

Query: 287 SPSKVTYTILMDAFVRSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASK 346
            P  VT+T L++ + ++  ++ A+++ + M + G  P+  TY  LI GLC +G++  A++
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477

Query: 347 LYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLC 406
           L   M ++ L+PN   YN+++NG CK  N  +A+K + E    G+     +Y   ++  C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537

Query: 407 NEGKSTEAKHLLKEMIEAGLKPS 429
             G+  +A+ +LKEM+  GL+P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPT 560

[Close]
BLAST of Cla012934 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.7e-60
Identity = 141/427 (33.02%), Postives = 217/427 (50.82%), Query Frame = 1 

Query: 5   GYCPSSFSFNNVLGLLAKSG-NLDRTWWFFTEFL-GRTHFDVYSFGITIKAFCENGNVSQ 64
           G+ P   S+N VL    +S  N+      F E L  +   +V+++ I I+ FC  GN+  
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223

Query: 65  GFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVMIN 124
              L  +ME  G  PNVV Y  LID   K   I+    L   M   GL  N  +Y V+IN
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 125 GFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGVSC 184
           G  ++G  K+   +  +M   G      TYN+LI  YCK+G    A  +  EM   G++ 
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 185 NVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALSYF 244
           +V+TY  LI  +C+   +++A   L++M+   + P  RT+  L+DG    G +++A    
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 245 EKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFVRS 304
            ++   G SP+ VTYN LI G    G       ++ +M+++G+SP  V+Y+ ++  F RS
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 305 DDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDVIY 364
            DV++A ++   M   G  PD  TY  LI G C +    EA  LY+ M+ + L P++  Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 365 NTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEMIE 424
             +IN YC E +  KAL+   EM++KGV P + +Y   I  L  + ++ EAK LL ++  
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583

Query: 425 AGLKPSE 430
               PS+
Sbjct: 584 EESVPSD 590


HSP 2 Score: 226.5 bits (576), Expect = 5.8e-58
Identity = 125/436 (28.67%), Postives = 230/436 (52.75%), Query Frame = 1 

Query: 8   PSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHF-DVYSFGITIKAFCENGNVSQGFEL 67
           P+ F++N ++     +GN+D     F +   +    +V ++   I  +C+   +  GF+L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262

Query: 68  LAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVMINGFFK 127
           L  M   G+ PN++ Y ++I+   + G +++   + ++M+  G   ++ TY  +I G+ K
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322

Query: 128 KGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGVSCNVVT 187
           +G       ++ +M   G+ PS+ TY SLI+  CK G ++ A +  ++M  RG+  N  T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382

Query: 188 YNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALSYFEKLK 247
           Y  L+ G  +K  +++A R+L EM     +P++ T+N L++G C TGK++ A++  E +K
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442

Query: 248 LIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFVRSDDVE 307
             G SP  V+Y+ +++GF ++ +      + REM ++GI P  +TY+ L+  F      +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 308 KAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDVIYNTMI 367
           +A  ++  M R+G  PD+ TY  LI+  CM+G++ +A +L+  MVE  + P+ V Y+ +I
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562

Query: 368 NGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIE---------------VLCNEGKST 427
           NG  K+  + +A + L ++  +   PS  +Y   IE                 C +G  T
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622


HSP 3 Score: 187.2 bits (474), Expect = 3.9e-46
Identity = 120/422 (28.44%), Postives = 206/422 (48.82%), Query Frame = 1 

Query: 4   KGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFL--GRTHFDVYSFGITIKAFCENGNVS 63
           +GY     ++N ++    K GN  +      E L  G T   V ++   I + C+ GN++
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP-SVITYTSLIHSMCKAGNMN 363

Query: 64  QGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVMI 123
           +  E L QM   G+ PN   YT L+D  S+ G + +A  +  +M+D G   +  TY  +I
Sbjct: 364 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 423

Query: 124 NGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGVS 183
           NG    G  +D   + E MK  G+ P + +Y+++++ +C+   +  A ++  EM  +G+ 
Sbjct: 424 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 483

Query: 184 CNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALSY 243
            + +TY+ LI G C +R+  +A  L EEM +  + P   T+  L++  C  G L+KAL  
Sbjct: 484 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 543

Query: 244 FEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFVR 303
             ++   G  P  VTY++LI G +K   +     L+ ++      PS VTY  L++    
Sbjct: 544 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE---N 603

Query: 304 SDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDVI 363
             ++E         K + S         LI G CMKG M EA ++++SM+  + +P+   
Sbjct: 604 CSNIE--------FKSVVS---------LIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 663

Query: 364 YNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEMI 423
           YN MI+G+C+  +  KA    +EM+K G      +    ++ L  EGK  E   ++  ++
Sbjct: 664 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 704

[Close]
BLAST of Cla012934 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-59
Identity = 133/430 (30.93%), Postives = 214/430 (49.77%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           +++ GYC +    NN L +L +                    DV ++   +++ C++G +
Sbjct: 177 VMISGYCKAG-EINNALSVLDRMS---------------VSPDVVTYNTILRSLCDSGKL 236

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
            Q  E+L +M +    P+V+ YTILI+A  ++  +  A  L  +M D G   +  TY V+
Sbjct: 237 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 296

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           +NG  K+G   +  +    M   G  P++ T+N ++   C  G+   A KL  +M  +G 
Sbjct: 297 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 356

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           S +VVT+NILI  LCRK  + +A  +LE+M Q    P   ++N L+ G C   K+D+A+ 
Sbjct: 357 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 416

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
           Y E++   G  P  VTYN ++    K G      E++ ++  +G SP  +TY  ++D   
Sbjct: 417 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 476

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           ++    KA ++   M+     PD  TY  L+ GL  +G + EA K +     M + PN V
Sbjct: 477 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 536

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
            +N+++ G CK   + +A+ FL  MI +G  P+  SY   IE L  EG + EA  LL E+
Sbjct: 537 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 590

Query: 421 IEAGLKPSES 431
              GL    S
Sbjct: 597 CNKGLMKKSS 590


HSP 2 Score: 208.0 bits (528), Expect = 2.1e-52
Identity = 116/377 (30.77%), Postives = 190/377 (50.40%), Query Frame = 1 

Query: 51  IKAFCENGNVSQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGL 110
           ++     G + +GF+ L  M   G  P+++  T LI    + G   +A  +   ++  G 
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 111 VANQYTYTVMINGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFK 170
           V +  TY VMI+G+ K G   +   + ++M    V P + TYN+++   C  GKL  A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 228

Query: 171 LFNEMSTRGVSCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLC 230
           + + M  R    +V+TY ILI   CR   V  A +LL+EM+     P + T+N+L++G+C
Sbjct: 229 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 288

Query: 231 NTGKLDKALSYFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKV 290
             G+LD+A+ +   +   G  P  +T+NI++      G      +L+ +M  +G SPS V
Sbjct: 289 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 348

Query: 291 TYTILMDAFVRSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSM 350
           T+ IL++   R   + +A  +   M + G  P+  +Y  L+HG C +  M  A +  + M
Sbjct: 349 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 408

Query: 351 VEMHLEPNDVIYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKS 410
           V     P+ V YNTM+   CK+     A++ L ++  KG +P L +Y   I+ L   GK+
Sbjct: 409 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 468

Query: 411 TEAKHLLKEMIEAGLKP 428
            +A  LL EM    LKP
Sbjct: 469 GKAIKLLDEMRAKDLKP 482

[Close]
BLAST of Cla012934 vs. Swiss-Prot
Match: PPR36_ARATH (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.2e-58
Identity = 133/436 (30.50%), Postives = 220/436 (50.46%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGR-THFDVYSFGITIKAFCENGN 60
           MV  G+ P   + N ++  L  SG          + +      +  ++G  +   C++G 
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243

Query: 61  VSQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTV 120
            +   ELL +ME   +  + V Y+I+ID   K+G ++ A  LF++M+  G+  N  TY +
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303

Query: 121 MINGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRG 180
           +I GF   G   DG +L   M    + P++ T++ LI+ + K+GKL  A +L  EM  RG
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363

Query: 181 VSCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKAL 240
           ++ + +TY  LI G C++  + KA ++++ M     +P IRTFN+L++G C   ++D  L
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423

Query: 241 SYFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAF 300
             F K+ L G    +VTYN LI GF + G   V  EL +EM  R + P+ VTY IL+D  
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483

Query: 301 VRSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPND 360
             + + EKA ++F  +++     D   Y ++IHG+C    + +A  L+ S+    ++P  
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543

Query: 361 VIYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKE 420
             YN MI G CK+    +A     +M + G  P   +Y   I     +G +T++  L++E
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 603

Query: 421 MIEAGLKPSESLCSKV 436
           +   G     S    V
Sbjct: 604 LKRCGFSVDASTIKMV 619


HSP 2 Score: 218.0 bits (554), Expect = 2.1e-55
Identity = 119/415 (28.67%), Postives = 208/415 (50.12%), Query Frame = 1 

Query: 8   PSSFSFNNVLGLLAKSGNLDRTWWFFT--EFLGRTHFDVYSFGITIKAFCENGNVSQGFE 67
           P+   F+ +   +AK+   D         E  G  H ++Y+  I I  FC    +   F 
Sbjct: 86  PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIMINCFCRCRKLCLAFS 145

Query: 68  LLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVMINGFF 127
            + ++ ++G  PN + ++ LI+     G + +A  L  +M ++G   +  T   ++NG  
Sbjct: 146 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 205

Query: 128 KKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGVSCNVV 187
             G + +   L +KM   G  P+  TY  ++N  CK G+ ++A +L  +M  R +  + V
Sbjct: 206 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 265

Query: 188 TYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALSYFEKL 247
            Y+I+I GLC+   +  A  L  EM+   I   I T+N+L+ G CN G+ D        +
Sbjct: 266 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 325

Query: 248 KLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFVRSDDV 307
                +P  VT+++LI  F K G      EL +EM  RGI+P  +TYT L+D F + + +
Sbjct: 326 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 385

Query: 308 EKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDVIYNTM 367
           +KA QM  LM   G  P+  T+ +LI+G C    + +  +L++ M    +  + V YNT+
Sbjct: 386 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 445

Query: 368 INGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 421
           I G+C+      A +  +EM+ + V P++ +Y   ++ LC+ G+S +A  + +++
Sbjct: 446 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499

[Close]
BLAST of Cla012934 vs. TrEMBL
Match: D7SKF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g04770 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 1.1e-148
Identity = 265/439 (60.36%), Postives = 339/439 (77.22%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           M+ +G  P S +FNN+L LL KS   ++ W  F E  G    DVYSFGI IK  CE G +
Sbjct: 121 MIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYL 180

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
            +GFE+L QME MG+SPNVV+YT LID C KNGDIE+ K LF KM +L +VANQYTYTV+
Sbjct: 181 DKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVL 240

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           INGFFK G KKDG ELYEKMKL G+ P++YTYNS+I   C DGKL+ AF+LF+EM  RGV
Sbjct: 241 INGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGV 300

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           +CNVVTYN LIGGLC++R+V +AERL+  MK+  ++P + ++N L+DG C+ G LDKA S
Sbjct: 301 ACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASS 360

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
            F ++K  GQSP+  TYNILIAGFS+A NS  V+++VREME RG+SPSKVTYTILMDA V
Sbjct: 361 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 420

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           RSD++EKA+Q++  M++ G V D + YGVLIHGLC+ G+M EASKL+KS+ EMHL+PNDV
Sbjct: 421 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 480

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           IYNTMI GYCKE +SY+AL+ L+EM + G+ P++ASY  TI++LC + K TEA+ LLK+M
Sbjct: 481 IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDM 540

Query: 421 IEAGLKPSESLCSKVGYAK 440
           IE GLKPS S+ + +  A+
Sbjct: 541 IELGLKPSISIWNMISKAR 559

[Close]
BLAST of Cla012934 vs. TrEMBL
Match: A5C2B0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019486 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 2.5e-148
Identity = 265/439 (60.36%), Postives = 338/439 (76.99%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           M+ +G  P S +FNN+L LL KS   ++ W  F E  G    DVYSFGI IK  CE G +
Sbjct: 108 MIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYL 167

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
            +GFE+L QME MG+SPNVV+YT LID C KNGDIE+ K LF KM +L +VANQYTYTV+
Sbjct: 168 DKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVL 227

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           INGFFK G KKDG ELYEKMKL G+ P++YTYNS+I   C DGKL+ AF+LF+EM  RGV
Sbjct: 228 INGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGV 287

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           +CNVVTYN LIGGLC++R+V +AERL+  MK+  ++P + ++N L+DG C+ G LDKA S
Sbjct: 288 ACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASS 347

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
            F ++K  GQSP+  TYNILIAGFS+A NS  V+++VREME RG+SPSKVTYTILMDA V
Sbjct: 348 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 407

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           RSD++EKA+Q++  M++ G V D + YGVLIHGLC+ G+M EASKL+KS+ EMHL+PNDV
Sbjct: 408 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 467

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           IYNTMI GYCKE +SY+AL+ L+EM + G+ P++ASY  TI +LC + K TEA+ LLK+M
Sbjct: 468 IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDM 527

Query: 421 IEAGLKPSESLCSKVGYAK 440
           IE GLKPS S+ + +  A+
Sbjct: 528 IELGLKPSISIWNMISKAR 546

[Close]
BLAST of Cla012934 vs. TrEMBL
Match: A0A067GBV0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043999mg PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 3.6e-147
Identity = 266/440 (60.45%), Postives = 339/440 (77.05%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           M+  G  P S +FN++L  + KS + D+ W FF+E   +   DVYSFGI IK  CE G++
Sbjct: 132 MLDSGVRPRSNTFNSLLIFVIKSCSFDKGWLFFSENRCKVELDVYSFGILIKGCCEAGDL 191

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
           ++ FE+L Q+E MG SPNVVIYT LID C KNGDIE+AK+LF K+ +LGLVA Q+TYTV+
Sbjct: 192 NKAFEVLNQLEEMGFSPNVVIYTSLIDGCCKNGDIERAKMLFRKIGELGLVATQHTYTVL 251

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           I G FK G +KDGFE YEKM+L GV PSLYTYN LI+EYC +GK+S  FKLF+EM  R V
Sbjct: 252 ICGLFKNGLQKDGFEFYEKMQLNGVSPSLYTYNCLIHEYCNEGKVSEGFKLFDEMRHREV 311

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           +CNVVTYN LI GLC++ +V +AERLL++MK A I+P + T+N L+DG C+ G+ DKA  
Sbjct: 312 ACNVVTYNTLICGLCKEMRVQEAERLLDQMKMAGISPNVITYNKLIDGFCDAGETDKAFR 371

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
            F +LK  GQSP+ VTYN+LI  FSKAGNS + S+LVREME+RGI+PS+VTYTIL+D+FV
Sbjct: 372 LFNQLKSNGQSPSVVTYNVLIRAFSKAGNSKMASDLVREMEERGITPSEVTYTILIDSFV 431

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           RSDD+EKA++M+ LM++ G  PD +TYGVLIHGLCMKGNM EASKL+ SM E  LEPNDV
Sbjct: 432 RSDDMEKAFEMYSLMQKSGFSPDVYTYGVLIHGLCMKGNMKEASKLFNSMWETKLEPNDV 491

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           +YN MI GYCKE NSY+AL+ L EM +KG+ P++ASY  TI VLC +GK  EA+ LL +M
Sbjct: 492 VYNMMIFGYCKEGNSYRALRLLGEMNEKGLVPNIASYSSTIGVLCQDGKWPEAEVLLNQM 551

Query: 421 IEAGLKPSESLCSKVGYAKS 441
           ++ GLKPS SL + +  AK+
Sbjct: 552 LKLGLKPSVSLYNILYRAKN 571

[Close]
BLAST of Cla012934 vs. TrEMBL
Match: U5FJB2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02730g PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 7.9e-147
Identity = 259/440 (58.86%), Postives = 336/440 (76.36%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           MV KG       FN++LG L +S   ++ W FF E   R  FDVYSFGI IK  CENGN+
Sbjct: 119 MVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNL 178

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
            + F+LL  ++ MG+SPNVVIYT LID C KNGDIE+A++ F KM ++GLVANQYT+TV+
Sbjct: 179 DKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVL 238

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           ING FKKG KKDGF+L+EKMK+ G+FP+LYTYN L+NEYC +GK+  AF LF+EM  RGV
Sbjct: 239 INGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGV 298

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
             NVVTYN LIGG+CR+ +V +AE+L+++MK+A ++P + T+N L+ G C+ G LDKA S
Sbjct: 299 EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLISGFCDVGNLDKASS 358

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
             ++LK  G SP+ VTYNILI G+SKAGN   V++L REME RGISPSKVT T+L+DA+V
Sbjct: 359 LLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYV 418

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           R  ++EKA+Q++  M++ G VPD + YGVLIHGLCMKGNM E+SKL++SM EMH+EP+DV
Sbjct: 419 RLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDV 478

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           IYNTMI+GYCKE NSY+AL+ L EM  KG+ P++ASY   I VLC +GK  EA+ LL +M
Sbjct: 479 IYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538

Query: 421 IEAGLKPSESLCSKVGYAKS 441
           IE  LKPS S+ + +  AK+
Sbjct: 539 IELQLKPSASILNMISKAKN 558

[Close]
BLAST of Cla012934 vs. TrEMBL
Match: U5FJB2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02730g PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31
Identity = 89/285 (31.23%), Postives = 143/285 (50.18%), Query Frame = 1 

Query: 147 PSLYT---YNSLINEYCKDGKLSIAFKLFNEMSTRGVSCNVVTYNILIGGLCRKRQVSKA 206
           PS+ T   Y S+IN + K   L  A   FNEM  +G+      +N L+G L R     KA
Sbjct: 88  PSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKA 147

Query: 207 ERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALSYFEKLKLIGQSPTSVTYNILIAG 266
                E+K+  +   + +F +++ G C  G LDK+      L+ +G SP  V Y  LI G
Sbjct: 148 WLFFNELKE-RVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDG 207

Query: 267 FSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFVRSDDVEKAYQMFHLMKRIGSVPD 326
             K G+         +M + G+  ++ T+T+L++   +    +  + +F  MK  G  P+
Sbjct: 208 CCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPN 267

Query: 327 QHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDVIYNTMINGYCKECNSYKALKFLE 386
            +TY  L++  C +G +  A  L+  M E  +E N V YNT+I G C+E   ++A K ++
Sbjct: 268 LYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVD 327

Query: 387 EMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEMIEAGLKPS 429
           +M K  V+P+L +Y   I   C+ G   +A  LL ++   GL PS
Sbjct: 328 QMKKAAVSPNLITYNTLISGFCDVGNLDKASSLLDQLKSNGLSPS 371


HSP 2 Score: 526.2 bits (1354), Expect = 3.9e-146
Identity = 254/428 (59.35%), Postives = 335/428 (78.27%), Query Frame = 1 

Query: 12  SFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNVSQGFELLAQME 71
           + NN+L  L K  + D+ W  FT+  GR   DVYSFGI IK  CE G++S+ FELL Q+E
Sbjct: 133 TLNNILSFLIKFDSFDKAWMLFTKSKGRVKLDVYSFGIMIKGCCEAGDLSKSFELLGQVE 192

Query: 72  RMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVMINGFFKKGYKK 131
            +G+SPNVV+YT LID C KNGD EQAK+LF +M++LGLV N+YTYTV+INGFFKKG KK
Sbjct: 193 ELGLSPNVVLYTTLIDGCCKNGDFEQAKMLFCRMEELGLVPNEYTYTVLINGFFKKGLKK 252

Query: 132 DGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGVSCNVVTYNILI 191
           DGF LYEKM+L GV P+LYTYN ++ EYC +GK+S AF++F EM  RGV+CNVVTYNILI
Sbjct: 253 DGFLLYEKMQLNGVIPNLYTYNCVMTEYCSEGKVSKAFEMFGEMRERGVACNVVTYNILI 312

Query: 192 GGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALSYFEKLKLIGQS 251
           GGLCR+ +V  AE+L+++M +A I+P + T+N L+DG CN GKL+KA+  F +LK  GQS
Sbjct: 313 GGLCRETKVWDAEKLVDQMTRAGISPNLITYNSLIDGFCNVGKLEKAMYLFNQLKTKGQS 372

Query: 252 PTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFVRSDDVEKAYQM 311
           P+ VTYNILI+GFS+A +S  V+ LV+EME+RGI PSKVT+TI++ AF+RS++ E+A ++
Sbjct: 373 PSLVTYNILISGFSRARDSAAVAGLVKEMEERGIRPSKVTHTIVIHAFIRSENTERAVEL 432

Query: 312 FHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDVIYNTMINGYCK 371
           +  M++ G VPD +T+GVLIHGLC KGNM EA KL KSM EM L+PNDVIYNTMI+GYCK
Sbjct: 433 YLFMQKAGLVPDVYTFGVLIHGLCTKGNMKEAWKLIKSMDEMQLKPNDVIYNTMIHGYCK 492

Query: 372 ECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEMIEAGLKPSESL 431
           E +SY+AL+ L+EM +KG+ P++ASY  TI +L  +GK  EA+ LLKE++E+GLKP+ S+
Sbjct: 493 EGSSYRALRLLQEMCEKGLVPNVASYSSTIGLLYKDGKWQEAEALLKEIVESGLKPTVSI 552

Query: 432 CSKVGYAK 440
              +   K
Sbjct: 553 YKLISKPK 560

[Close]
BLAST of Cla012934 vs. NCBI nr
Match: gi|449438586|ref|XP_004137069.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Cucumis sativus])

HSP 1 Score: 767.3 bits (1980), Expect = 1.5e-218
Identity = 374/442 (84.62%), Postives = 407/442 (92.08%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           MVLKG+ PSSFSFNN L LLAKSGNLDRTW FFTE+LGRT FDVYSFGITIKAFCENGNV
Sbjct: 64  MVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIKAFCENGNV 123

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
           S+GFELLAQME MG+SPNV IYTILI+AC +NGDI+QAKV+FS+MDDLGL ANQY YT+M
Sbjct: 124 SKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIM 183

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           INGFFKKGYKKDGFELY+KMKLVGV P+LYTYNSLI EYC+DGKLS+AFK+F+E+S RGV
Sbjct: 184 INGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGV 243

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           +CN VTYNILIGGLCRK QVSKAE LLE MK+AHINPT RTFN+LMDGLCNTG+LDKALS
Sbjct: 244 ACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALS 303

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
           Y EKLKLIG  PT VTYNILI+GFSK GNS VVSELVREMEDRGISPSKVTYTILM+ FV
Sbjct: 304 YLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFV 363

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           RSDD+EKAY+MFHLMKRIG VPDQHTYGVLIHGLC+KGNMVEASKLYKSMVEMHL+PNDV
Sbjct: 364 RSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDV 423

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           IYNTMINGYCKECNSYKALKFLEEM+K GVTP++ASY  TI++LC +GKS EAK LLKEM
Sbjct: 424 IYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEM 483

Query: 421 IEAGLKPSESLCSKVGYAKSCA 443
            EAGLKP ESLCSKVG AKSCA
Sbjct: 484 TEAGLKPPESLCSKVGQAKSCA 505

[Close]
BLAST of Cla012934 vs. NCBI nr
Match: gi|659110247|ref|XP_008455127.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Cucumis melo])

HSP 1 Score: 766.5 bits (1978), Expect = 2.5e-218
Identity = 376/436 (86.24%), Postives = 405/436 (92.89%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           MVLKG+ PSS+SFNNVL LLAKSGNLDRTWWFFTE+LGRT FDVYSFGITIKAFCENGNV
Sbjct: 69  MVLKGHSPSSYSFNNVLDLLAKSGNLDRTWWFFTEYLGRTQFDVYSFGITIKAFCENGNV 128

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
           S+GFELLAQME MG+SPNV IYTILI+AC KNGDI+QAKV+FS+MDDLGL A+QY YTVM
Sbjct: 129 SKGFELLAQMETMGVSPNVFIYTILIEACCKNGDIDQAKVMFSRMDDLGLAADQYIYTVM 188

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           INGFFKKGYKKDGFELYEKMKL+GV P+LYTYNSLI EYC+DGKLS+AFKLF+E+S RGV
Sbjct: 189 INGFFKKGYKKDGFELYEKMKLMGVLPNLYTYNSLITEYCRDGKLSLAFKLFDEISKRGV 248

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           +CN VTYNILIGGLCRK QV KAE LLE MK+AHINPT RTFNLLMDGLCNTGKLDKALS
Sbjct: 249 ACNAVTYNILIGGLCRKGQVLKAEGLLERMKRAHINPTTRTFNLLMDGLCNTGKLDKALS 308

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
           Y +KLKLIGQSPT VTYNILI+GFSK GNS VVSELVREMEDRGISPSKVTYTILMDAFV
Sbjct: 309 YLDKLKLIGQSPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMDAFV 368

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           RSDD+EKAY+MFHLMKRIG VPDQHTYGVLIHGLC++GNMVEASKLYKSMVEMHLEPNDV
Sbjct: 369 RSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIRGNMVEASKLYKSMVEMHLEPNDV 428

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           IYNTMINGYCKECNSYKALKFLEEM+K GVTP++ASY  TI+VLC +GKS EAK LLKEM
Sbjct: 429 IYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQVLCKDGKSIEAKRLLKEM 488

Query: 421 IEAGLKPSESLCSKVG 437
            EAGLKP ESL SKVG
Sbjct: 489 TEAGLKPPESLRSKVG 504

[Close]
BLAST of Cla012934 vs. NCBI nr
Match: gi|645216993|ref|XP_008223610.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Prunus mume])

HSP 1 Score: 545.8 bits (1405), Expect = 6.9e-152
Identity = 269/439 (61.28%), Postives = 343/439 (78.13%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           MV +G  P S +FNN+LG L KS +  + WW F EF GR   DVYSFGI IK+ CE G++
Sbjct: 121 MVDQGLVPRSNTFNNLLGFLVKSKDFGKAWWVFNEFKGRVELDVYSFGIMIKSCCEAGDL 180

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
            +GFELL Q+E MG+SPNVVI++ LID C KNGD+E+AK +F KM++LGLVANQYTYT +
Sbjct: 181 DRGFELLVQLEEMGLSPNVVIFSTLIDGCCKNGDLERAKKMFGKMEELGLVANQYTYTSL 240

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           I+G FKKG+KKDGFELY+KMK  GV P++ TYN LINE C DGK+S A +LF+EM  RGV
Sbjct: 241 IDGLFKKGHKKDGFELYDKMKSNGVVPNVCTYNCLINERCNDGKMSRALELFDEMRERGV 300

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           +CNVV +N +I GLCR+ ++ +AE+   +M +  I+P   TFN L++G CN GKLDKALS
Sbjct: 301 ACNVVAFNTVICGLCREIRMWEAEKFFNQMIREGISPNTVTFNTLINGFCNLGKLDKALS 360

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
            F++LK  GQSP+ VTYN+LI GF++A NS  V++LVREM DRG+SPSKVTYTIL+DA V
Sbjct: 361 LFDQLKSNGQSPSLVTYNVLIQGFARAQNSARVADLVREMNDRGVSPSKVTYTILIDALV 420

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           RS D+E+A+Q+F  M++ G VPD HTYGVLIHGLCMKG+M EASKL+KSM + +LEPNDV
Sbjct: 421 RSGDMERAFQIFFSMEKAGMVPDTHTYGVLIHGLCMKGDMKEASKLFKSMSDTNLEPNDV 480

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           IYN MI+GYCKE +SY+AL+ L+EM K  + P++ASY  TI VLCN+GK  EA+ LLKEM
Sbjct: 481 IYNMMIHGYCKEGSSYRALRLLKEMRKNRMIPNVASYSSTIVVLCNDGKWEEAEFLLKEM 540

Query: 421 IEAGLKPSESLCSKVGYAK 440
           IE+ L+PS SL + +  AK
Sbjct: 541 IESDLRPSVSLYNILSKAK 559

[Close]
BLAST of Cla012934 vs. NCBI nr
Match: gi|297746072|emb|CBI16128.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 534.6 bits (1376), Expect = 1.6e-148
Identity = 265/439 (60.36%), Postives = 339/439 (77.22%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           M+ +G  P S +FNN+L LL KS   ++ W  F E  G    DVYSFGI IK  CE G +
Sbjct: 121 MIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYL 180

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
            +GFE+L QME MG+SPNVV+YT LID C KNGDIE+ K LF KM +L +VANQYTYTV+
Sbjct: 181 DKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVL 240

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           INGFFK G KKDG ELYEKMKL G+ P++YTYNS+I   C DGKL+ AF+LF+EM  RGV
Sbjct: 241 INGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGV 300

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           +CNVVTYN LIGGLC++R+V +AERL+  MK+  ++P + ++N L+DG C+ G LDKA S
Sbjct: 301 ACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASS 360

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
            F ++K  GQSP+  TYNILIAGFS+A NS  V+++VREME RG+SPSKVTYTILMDA V
Sbjct: 361 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 420

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           RSD++EKA+Q++  M++ G V D + YGVLIHGLC+ G+M EASKL+KS+ EMHL+PNDV
Sbjct: 421 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 480

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           IYNTMI GYCKE +SY+AL+ L+EM + G+ P++ASY  TI++LC + K TEA+ LLK+M
Sbjct: 481 IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDM 540

Query: 421 IEAGLKPSESLCSKVGYAK 440
           IE GLKPS S+ + +  A+
Sbjct: 541 IELGLKPSISIWNMISKAR 559

[Close]
BLAST of Cla012934 vs. NCBI nr
Match: gi|731392192|ref|XP_010651016.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Vitis vinifera])

HSP 1 Score: 534.6 bits (1376), Expect = 1.6e-148
Identity = 265/439 (60.36%), Postives = 339/439 (77.22%), Query Frame = 1 

Query: 1   MVLKGYCPSSFSFNNVLGLLAKSGNLDRTWWFFTEFLGRTHFDVYSFGITIKAFCENGNV 60
           M+ +G  P S +FNN+L LL KS   ++ W  F E  G    DVYSFGI IK  CE G +
Sbjct: 121 MIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYL 180

Query: 61  SQGFELLAQMERMGMSPNVVIYTILIDACSKNGDIEQAKVLFSKMDDLGLVANQYTYTVM 120
            +GFE+L QME MG+SPNVV+YT LID C KNGDIE+ K LF KM +L +VANQYTYTV+
Sbjct: 181 DKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVL 240

Query: 121 INGFFKKGYKKDGFELYEKMKLVGVFPSLYTYNSLINEYCKDGKLSIAFKLFNEMSTRGV 180
           INGFFK G KKDG ELYEKMKL G+ P++YTYNS+I   C DGKL+ AF+LF+EM  RGV
Sbjct: 241 INGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGV 300

Query: 181 SCNVVTYNILIGGLCRKRQVSKAERLLEEMKQAHINPTIRTFNLLMDGLCNTGKLDKALS 240
           +CNVVTYN LIGGLC++R+V +AERL+  MK+  ++P + ++N L+DG C+ G LDKA S
Sbjct: 301 ACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASS 360

Query: 241 YFEKLKLIGQSPTSVTYNILIAGFSKAGNSFVVSELVREMEDRGISPSKVTYTILMDAFV 300
            F ++K  GQSP+  TYNILIAGFS+A NS  V+++VREME RG+SPSKVTYTILMDA V
Sbjct: 361 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 420

Query: 301 RSDDVEKAYQMFHLMKRIGSVPDQHTYGVLIHGLCMKGNMVEASKLYKSMVEMHLEPNDV 360
           RSD++EKA+Q++  M++ G V D + YGVLIHGLC+ G+M EASKL+KS+ EMHL+PNDV
Sbjct: 421 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDV 480

Query: 361 IYNTMINGYCKECNSYKALKFLEEMIKKGVTPSLASYGFTIEVLCNEGKSTEAKHLLKEM 420
           IYNTMI GYCKE +SY+AL+ L+EM + G+ P++ASY  TI++LC + K TEA+ LLK+M
Sbjct: 481 IYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDM 540

Query: 421 IEAGLKPSESLCSKVGYAK 440
           IE GLKPS S+ + +  A+
Sbjct: 541 IELGLKPSISIWNMISKAR 559

The following BLAST results are available for this feature:
BLAST of Cla012934 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP306_ARATH5.1e-13955.23Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN... [more]
PPR12_ARATH1.3e-6230.95Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
PP407_ARATH4.7e-6033.02Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PPR28_ARATH1.4e-5930.93Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... [more]
PPR36_ARATH1.2e-5830.50Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
BLAST of Cla012934 vs. TrEMBL
Match NameE-valueIdentityDescription
D7SKF2_VITVI1.1e-14860.36Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g04770 PE=4 SV=... [more]
A5C2B0_VITVI2.5e-14860.36Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019486 PE=4 SV=1[more]
A0A067GBV0_CITSI3.6e-14760.45Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043999mg PE=4 SV=1[more]
U5FJB2_POPTR7.9e-14758.86Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02730g PE=4 SV=1[more]
U5FJB2_POPTR1.1e-3131.23Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02730g PE=4 SV=1[more]
BLAST of Cla012934 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438586|ref|XP_004137069.1|1.5e-21884.62PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Cucumis sativu... [more]
gi|659110247|ref|XP_008455127.1|2.5e-21886.24PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Cucumis melo][more]
gi|645216993|ref|XP_008223610.1|6.9e-15261.28PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Prunus mume][more]
gi|297746072|emb|CBI16128.3|1.6e-14860.36unnamed protein product [Vitis vinifera][more]
gi|731392192|ref|XP_010651016.1|1.6e-14860.36PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Vitis vinifera... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0080156 mitochondrial mRNA modification
biological_process GO:0009737 response to abscisic acid
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU75851watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012934Cla012934.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU75851WMU75851transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 46..74
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 217..266
score: 1.6E-11coord: 290..335
score: 2.2E-13coord: 77..126
score: 2.4E-15coord: 147..196
score: 2.2E-20coord: 357..406
score: 2.5
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 290..323
score: 2.3E-8coord: 80..113
score: 1.9E-7coord: 255..288
score: 2.2E-7coord: 325..358
score: 6.0E-8coord: 401..429
score: 1.3E-4coord: 115..148
score: 1.3E-5coord: 221..245
score: 1.7E-5coord: 150..184
score: 6.7E-9coord: 47..79
score: 2.3E-5coord: 360..393
score: 3.8E-10coord: 185..218
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 148..182
score: 12.233coord: 218..252
score: 11.027coord: 43..77
score: 11.312coord: 183..217
score: 13.055coord: 78..112
score: 11.257coord: 113..147
score: 11.159coord: 323..357
score: 11.63coord: 253..287
score: 11.323coord: 288..322
score: 11.509coord: 393..427
score: 10.391coord: 358..392
score: 12.825coord: 9..39
score:
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 150..428
score: 3.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 8..428
score: 3.3E
NoneNo IPR availablePANTHERPTHR24015:SF362SUBFAMILY NOT NAMEDcoord: 8..428
score: 3.3E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 299..428
score: 3.92E-8coord: 82..260
score: 7.3