Cla012373 (gene) Watermelon (97103) v1

Overview
NameCla012373
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
Descriptionclass IV heat shock protein (AHRD V1 ***- B6TXB5_MAIZE); contains Interpro domain(s) IPR002068 Heat shock protein Hsp20
LocationChr8 : 2725497 .. 2726063 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAACTTCAAGGCAGTACAACTCTTCTTGTTCGCAATTTTCATCTCTGCTTTTCTTCTTACCCCATCCGAACCCTCTCTTCTTCCATTCATCGACCCATTTGGGATTCTGGAACAAACCCCATTTGGGTTCCCAGAAAAAGAAAACAGAGATGCTCTGCAGCAGCCACTCCCGCCGGCGAGAGTTGACTGGAAAGAGACGCCAGAGAGCCACGTGATCATGCTGGATGTGCCAGGAATGAACAAGGAGGAGATGAAGATCGAATTGGACGAGGAAAACAGGATTCTGAAAGTGATCGGAGAGAGGAAAAGGGAAGAGGAGAAACAGAGTGAGCATTGGCATAGATTGGAACGAAGCTATGGAAAATTCTGGAGGCAGTTTCGACTGCCCAGTAATGCGGATATGGAATCTGTTAAAGCTCAGCTTCAGAATGGGGTTCTTAAGGTGACTTTGTCGAAGCTTTCGCCGGAGAAGATTAAGGGTCCGAGAGTGGTCGGCATTTTGGATGAACAACCGCCGGCCGGGGAGCTGAACAAGTCCGGCGGGCCCAGGCAGGAGCTGTGA

mRNA sequence

ATGGCAAACTTCAAGGCAGTACAACTCTTCTTGTTCGCAATTTTCATCTCTGCTTTTCTTCTTACCCCATCCGAACCCTCTCTTCTTCCATTCATCGACCCATTTGGGATTCTGGAACAAACCCCATTTGGGTTCCCAGAAAAAGAAAACAGAGATGCTCTGCAGCAGCCACTCCCGCCGGCGAGAGTTGACTGGAAAGAGACGCCAGAGAGCCACGTGATCATGCTGGATGTGCCAGGAATGAACAAGGAGGAGATGAAGATCGAATTGGACGAGGAAAACAGGATTCTGAAAGTGATCGGAGAGAGGAAAAGGGAAGAGGAGAAACAGAGTGAGCATTGGCATAGATTGGAACGAAGCTATGGAAAATTCTGGAGGCAGTTTCGACTGCCCAGTAATGCGGATATGGAATCTGTTAAAGCTCAGCTTCAGAATGGGGTTCTTAAGGTGACTTTGTCGAAGCTTTCGCCGGAGAAGATTAAGGGTCCGAGAGTGGTCGGCATTTTGGATGAACAACCGCCGGCCGGGGAGCTGAACAAGTCCGGCGGGCCCAGGCAGGAGCTGTGA

Coding sequence (CDS)

ATGGCAAACTTCAAGGCAGTACAACTCTTCTTGTTCGCAATTTTCATCTCTGCTTTTCTTCTTACCCCATCCGAACCCTCTCTTCTTCCATTCATCGACCCATTTGGGATTCTGGAACAAACCCCATTTGGGTTCCCAGAAAAAGAAAACAGAGATGCTCTGCAGCAGCCACTCCCGCCGGCGAGAGTTGACTGGAAAGAGACGCCAGAGAGCCACGTGATCATGCTGGATGTGCCAGGAATGAACAAGGAGGAGATGAAGATCGAATTGGACGAGGAAAACAGGATTCTGAAAGTGATCGGAGAGAGGAAAAGGGAAGAGGAGAAACAGAGTGAGCATTGGCATAGATTGGAACGAAGCTATGGAAAATTCTGGAGGCAGTTTCGACTGCCCAGTAATGCGGATATGGAATCTGTTAAAGCTCAGCTTCAGAATGGGGTTCTTAAGGTGACTTTGTCGAAGCTTTCGCCGGAGAAGATTAAGGGTCCGAGAGTGGTCGGCATTTTGGATGAACAACCGCCGGCCGGGGAGCTGAACAAGTCCGGCGGGCCCAGGCAGGAGCTGTGA

Protein sequence

MANFKAVQLFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGFPEKENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAGELNKSGGPRQEL
Homology
[Close]
BLAST of Cla012373 vs. Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-51
Identity = 100/158 (63.29%), Postives = 119/158 (75.32%), Query Frame = 1 

Query: 31  FIDPFGILEQTPFGFPEKENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIEL 90
           F DPF +LE  PFG     ++D     + PARVDWKETPE HVIMLDVPG+ +EE+K+E+
Sbjct: 41  FPDPFRVLEHIPFGV----DKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEV 100

Query: 91  DEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKV 150
            EENR+L+V GERK+EEEK+ +HWHR+ERSYGKFWRQFRLP N D++SVKA+L+NGVL +
Sbjct: 101 -EENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTL 160

Query: 151 TLSKLSPEKIKGPRVVGILDEQPPAGELNKSGGPRQEL 189
           TL KLSP KIKGPRVV I  E    G LN  G  +QEL
Sbjct: 161 TLDKLSPGKIKGPRVVSIAGEDHQQGNLNNDGA-KQEL 192

[Close]
BLAST of Cla012373 vs. Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-46
Identity = 93/151 (61.59%), Postives = 114/151 (75.50%), Query Frame = 1 

Query: 31  FIDPFGILEQTPFGFPEKENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIEL 90
           F DPF ILE+ P G  E++   AL     PARVDWKET E H IMLD+PG+ K+E+KIE+
Sbjct: 46  FPDPFKILERIPLGL-ERDTSVALS----PARVDWKETAEGHEIMLDIPGLKKDEVKIEV 105

Query: 91  DEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKV 150
            EEN +L+V GERKREEEK+ + WHR+ERSYGKFWRQF+LP N DMESVKA+L+NGVL +
Sbjct: 106 -EENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 165

Query: 151 TLSKLSPEKIKGPRVVGILDEQPPAGELNKS 182
            L+KLSPEK+KGPRVV I  E+    +++ S
Sbjct: 166 NLTKLSPEKVKGPRVVNIAAEEDQTAKISSS 190

[Close]
BLAST of Cla012373 vs. Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-46
Identity = 97/178 (54.49%), Postives = 125/178 (70.22%), Query Frame = 1 

Query: 10  FLFAIFISAFLLTPSEPSLLPFID----------------PFGILEQTPFGFPEKENRDA 69
           FL  I  + F L  ++ SLLPFID                PF +LEQ P+G  + E    
Sbjct: 13  FLLLILAADFPLK-AKASLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSIT 72

Query: 70  LQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEH 129
           L      ARVDWKETPE HVIM+DVPG+ K+++KIE+ EENR+L+V GERK+EE+K+ +H
Sbjct: 73  LSH----ARVDWKETPEGHVIMVDVPGLKKDDIKIEV-EENRVLRVSGERKKEEDKKGDH 132

Query: 130 WHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDE 172
           WHR+ERSYGKFWRQF+LP N D++SVKA+++NGVL +TL KLS +KIKGPR+V I++E
Sbjct: 133 WHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKGPRMVSIVEE 184

[Close]
BLAST of Cla012373 vs. Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 2.6e-39
Identity = 84/163 (51.53%), Postives = 109/163 (66.87%), Query Frame = 1 

Query: 25  EPSLLPFIDPFGILEQTPFGFPEKENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKE 84
           E  LL   DPF ILE  PFGF    +RD +   L  ARVDW+ET ++H +++DVPGM KE
Sbjct: 45  ELGLLAAADPFRILEHVPFGF----DRDDVAM-LSMARVDWRETGDAHEVVVDVPGMRKE 104

Query: 85  EMKIELDEENRILKVIGERKREEEKQS----EHWHRLERSYGKFWRQFRLPSNADMESVK 144
           ++++E+ E+NR+L++ GER+REE  +     +HWHR ERSYG+FWRQ RLP NAD++S+ 
Sbjct: 105 DLRVEV-EDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIA 164

Query: 145 AQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAGELNKSGG 184
           A L NGVL V   KL+P++IKGPRVVGI       G     GG
Sbjct: 165 ASLDNGVLTVRFRKLAPDQIKGPRVVGIASAGGDDGGKKSIGG 201

[Close]
BLAST of Cla012373 vs. Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 68/139 (48.92%), Postives = 92/139 (66.19%), Query Frame = 1 

Query: 33  DPFGILEQTPF---GFPEKENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIE 92
           DPF I    PF   GFP   + ++        R+DWKETPE HV  +D+PG+ KEE+K+E
Sbjct: 18  DPFSIDVFDPFRELGFPSTNSGES--SAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVE 77

Query: 93  LDEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLK 152
           + EE+R+L++ GER  E+E +++ WHR+ERS GKF R+FRLP NA M+ VKA ++NGVL 
Sbjct: 78  V-EEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLT 137

Query: 153 VTLSKLSPEKIKGPRVVGI 169
           VT+ K   E++K P V  I
Sbjct: 138 VTVPK---EEVKKPEVKSI 150

[Close]
BLAST of Cla012373 vs. TrEMBL
Match: H6TB46_CITLA (HSP20.3 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.2e-93
Identity = 172/176 (97.73%), Postives = 173/176 (98.30%), Query Frame = 1 

Query: 1   MANFKAVQLFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGFPEKENRDALQQPLPP 60
           MANFKAVQLFLFAIFIS+FLLTPSEPSLLPFIDPFGILEQTPFG  E ENRDALQQPLPP
Sbjct: 1   MANFKAVQLFLFAIFISSFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPP 60

Query: 61  ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS 120
           ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS
Sbjct: 61  ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS 120

Query: 121 YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAG 177
           YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAG
Sbjct: 121 YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAG 176

[Close]
BLAST of Cla012373 vs. TrEMBL
Match: A0A0A0KSN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646740 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.0e-82
Identity = 154/189 (81.48%), Postives = 167/189 (88.36%), Query Frame = 1 

Query: 1   MANFKAVQLFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGFPEKENRDAL-QQPLP 60
           MA  KA+QL    IFI AFLLT S PSLLPFIDPFGILEQTPFG  E EN+D L QQPLP
Sbjct: 1   MAESKAIQLIFSTIFIFAFLLTSSHPSLLPFIDPFGILEQTPFGLLENENKDVLQQQPLP 60

Query: 61  PARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLER 120
           PARVDWKET ESH IM+DVPGMNKEE+KIELDEENR+LKVIGERKREEEKQS+HWHRLER
Sbjct: 61  PARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLER 120

Query: 121 SYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAGELN 180
           SYGKFWRQ RLP NAD+ESVKA+L+NGVLK++L KLS EKIKGPRVVGILDEQPPAGE+N
Sbjct: 121 SYGKFWRQLRLPVNADLESVKAKLENGVLKISLLKLSQEKIKGPRVVGILDEQPPAGEMN 180

Query: 181 KSGGPRQEL 189
           KSG  +QEL
Sbjct: 181 KSGAAKQEL 189

[Close]
BLAST of Cla012373 vs. TrEMBL
Match: V7BHH5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G113700g PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-51
Identity = 113/197 (57.36%), Postives = 138/197 (70.05%), Query Frame = 1 

Query: 8   QLFLFAIFISAFLLTPSEPSLLPFIDP----------------FGILEQTPFGFPEKENR 67
           QL LF + +   L+T +  SLLPFIDP                F +LEQ PFG      +
Sbjct: 5   QLILFLLLL---LVTKANGSLLPFIDPPRGVLAELLSDRFPDPFHVLEQIPFGV----EK 64

Query: 68  DALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQS 127
           D     + PARVDWKETPE HV+MLDVPGM +EE+KIE+ EENR+L+V GERKREEEK+ 
Sbjct: 65  DEQSMVMSPARVDWKETPEGHVMMLDVPGMKREEIKIEV-EENRVLRVSGERKREEEKKG 124

Query: 128 EHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDE 187
           +HWHR+ERSYGKFWRQFRLP N D++SVKA+L+NGVL +TL KLSPEKIKGPRVV I  E
Sbjct: 125 DHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPEKIKGPRVVSIAGE 184

Query: 188 QPPAGELNKSGGPRQEL 189
                +L+ + G +QEL
Sbjct: 185 DQQQAKLS-TDGAKQEL 192

[Close]
BLAST of Cla012373 vs. TrEMBL
Match: A0A0B2RDT3_GLYSO (22.0 kDa class IV heat shock protein OS=Glycine soja GN=glysoja_029966 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-51
Identity = 110/197 (55.84%), Postives = 136/197 (69.04%), Query Frame = 1 

Query: 8   QLFLFAIFISAFLLTPSEPSLLPFIDP----------------FGILEQTPFGFPEKENR 67
           QL LF +      +  +  SLLPFIDP                F +LEQ PFG     ++
Sbjct: 5   QLNLFLVSFLLLFVARANGSLLPFIDPPTTLLADLWSDRFPDPFRVLEQIPFGV----DK 64

Query: 68  DALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQS 127
           D     + PARVDWKETPE HVIMLDVPG+ +EE+KIE+ EENR+L+V GERK+EEEK+ 
Sbjct: 65  DEPSMAMSPARVDWKETPEGHVIMLDVPGLKREEIKIEV-EENRVLRVSGERKKEEEKKG 124

Query: 128 EHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDE 187
           +HWHR+ERSYGKFWRQFRLP N D++SVKA+++NGVL +TL KLSP+KIKGPR+V I  E
Sbjct: 125 DHWHRVERSYGKFWRQFRLPQNVDLDSVKAKMENGVLTLTLDKLSPDKIKGPRLVSIAGE 184

Query: 188 QPPAGELNKSGGPRQEL 189
               G LN S G +QEL
Sbjct: 185 DQQQGNLN-SDGVKQEL 195

[Close]
BLAST of Cla012373 vs. TrEMBL
Match: I1LC12_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G176400 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-51
Identity = 110/197 (55.84%), Postives = 136/197 (69.04%), Query Frame = 1 

Query: 8   QLFLFAIFISAFLLTPSEPSLLPFIDP----------------FGILEQTPFGFPEKENR 67
           QL LF +      +  +  SLLPFIDP                F +LEQ PFG     ++
Sbjct: 5   QLNLFLVSFLLLFVARANGSLLPFIDPPTTLLADLWSDRFPDPFRVLEQIPFGV----DK 64

Query: 68  DALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQS 127
           D     + PARVDWKETPE HVIMLDVPG+ +EE+KIE+ EENR+L+V GERK+EEEK+ 
Sbjct: 65  DEPSMAMSPARVDWKETPEGHVIMLDVPGLKREEIKIEV-EENRVLRVSGERKKEEEKKG 124

Query: 128 EHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDE 187
           +HWHR+ERSYGKFWRQFRLP N D++SVKA+++NGVL +TL KLSP+KIKGPR+V I  E
Sbjct: 125 DHWHRVERSYGKFWRQFRLPQNVDLDSVKAKMENGVLTLTLDKLSPDKIKGPRLVSIAGE 184

Query: 188 QPPAGELNKSGGPRQEL 189
               G LN S G +QEL
Sbjct: 185 DQQQGNLN-SDGVKQEL 195

[Close]
BLAST of Cla012373 vs. NCBI nr
Match: gi|315932726|gb|ADU55793.1| (HSP20.3 [Citrullus lanatus])

HSP 1 Score: 348.2 bits (892), Expect = 8.9e-93
Identity = 172/176 (97.73%), Postives = 173/176 (98.30%), Query Frame = 1 

Query: 1   MANFKAVQLFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGFPEKENRDALQQPLPP 60
           MANFKAVQLFLFAIFIS+FLLTPSEPSLLPFIDPFGILEQTPFG  E ENRDALQQPLPP
Sbjct: 1   MANFKAVQLFLFAIFISSFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPP 60

Query: 61  ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS 120
           ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS
Sbjct: 61  ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS 120

Query: 121 YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAG 177
           YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAG
Sbjct: 121 YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAG 176

[Close]
BLAST of Cla012373 vs. NCBI nr
Match: gi|659119141|ref|XP_008459498.1| (PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 2.6e-84
Identity = 156/189 (82.54%), Postives = 171/189 (90.48%), Query Frame = 1 

Query: 1   MANFKAVQLFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGFPEKENRDAL-QQPLP 60
           MA  KA+QL    +FI AFL+T S+PSLLPFIDPFGILEQTPFG  E EN+DAL QQPLP
Sbjct: 1   MAESKAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLP 60

Query: 61  PARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLER 120
           PARVDWKET ESH IM+DVPGMNKEE+KIELDEENR+LKVIGERKREEEKQS+HWHRLER
Sbjct: 61  PARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLER 120

Query: 121 SYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAGELN 180
           SYGKFWRQ RLP NAD+ESVKA+L+NGVLK+TLSKLSPEKIKGPRVVGILDEQPPAGE+N
Sbjct: 121 SYGKFWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDEQPPAGEIN 180

Query: 181 KSGGPRQEL 189
           KSG  +QEL
Sbjct: 181 KSGAAKQEL 189

[Close]
BLAST of Cla012373 vs. NCBI nr
Match: gi|449447525|ref|XP_004141518.1| (PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 7.1e-82
Identity = 154/189 (81.48%), Postives = 167/189 (88.36%), Query Frame = 1 

Query: 1   MANFKAVQLFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGFPEKENRDAL-QQPLP 60
           MA  KA+QL    IFI AFLLT S PSLLPFIDPFGILEQTPFG  E EN+D L QQPLP
Sbjct: 1   MAESKAIQLIFSTIFIFAFLLTSSHPSLLPFIDPFGILEQTPFGLLENENKDVLQQQPLP 60

Query: 61  PARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLER 120
           PARVDWKET ESH IM+DVPGMNKEE+KIELDEENR+LKVIGERKREEEKQS+HWHRLER
Sbjct: 61  PARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLER 120

Query: 121 SYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPAGELN 180
           SYGKFWRQ RLP NAD+ESVKA+L+NGVLK++L KLS EKIKGPRVVGILDEQPPAGE+N
Sbjct: 121 SYGKFWRQLRLPVNADLESVKAKLENGVLKISLLKLSQEKIKGPRVVGILDEQPPAGEMN 180

Query: 181 KSGGPRQEL 189
           KSG  +QEL
Sbjct: 181 KSGAAKQEL 189

[Close]
BLAST of Cla012373 vs. NCBI nr
Match: gi|593686502|ref|XP_007143922.1| (hypothetical protein PHAVU_007G113700g [Phaseolus vulgaris])

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-51
Identity = 113/197 (57.36%), Postives = 138/197 (70.05%), Query Frame = 1 

Query: 8   QLFLFAIFISAFLLTPSEPSLLPFIDP----------------FGILEQTPFGFPEKENR 67
           QL LF + +   L+T +  SLLPFIDP                F +LEQ PFG      +
Sbjct: 5   QLILFLLLL---LVTKANGSLLPFIDPPRGVLAELLSDRFPDPFHVLEQIPFGV----EK 64

Query: 68  DALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQS 127
           D     + PARVDWKETPE HV+MLDVPGM +EE+KIE+ EENR+L+V GERKREEEK+ 
Sbjct: 65  DEQSMVMSPARVDWKETPEGHVMMLDVPGMKREEIKIEV-EENRVLRVSGERKREEEKKG 124

Query: 128 EHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDE 187
           +HWHR+ERSYGKFWRQFRLP N D++SVKA+L+NGVL +TL KLSPEKIKGPRVV I  E
Sbjct: 125 DHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPEKIKGPRVVSIAGE 184

Query: 188 QPPAGELNKSGGPRQEL 189
                +L+ + G +QEL
Sbjct: 185 DQQQAKLS-TDGAKQEL 192

[Close]
BLAST of Cla012373 vs. NCBI nr
Match: gi|734398571|gb|KHN30529.1| (22.0 kDa class IV heat shock protein [Glycine soja])

HSP 1 Score: 209.9 bits (533), Expect = 3.8e-51
Identity = 110/197 (55.84%), Postives = 136/197 (69.04%), Query Frame = 1 

Query: 8   QLFLFAIFISAFLLTPSEPSLLPFIDP----------------FGILEQTPFGFPEKENR 67
           QL LF +      +  +  SLLPFIDP                F +LEQ PFG     ++
Sbjct: 5   QLNLFLVSFLLLFVARANGSLLPFIDPPTTLLADLWSDRFPDPFRVLEQIPFGV----DK 64

Query: 68  DALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQS 127
           D     + PARVDWKETPE HVIMLDVPG+ +EE+KIE+ EENR+L+V GERK+EEEK+ 
Sbjct: 65  DEPSMAMSPARVDWKETPEGHVIMLDVPGLKREEIKIEV-EENRVLRVSGERKKEEEKKG 124

Query: 128 EHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDE 187
           +HWHR+ERSYGKFWRQFRLP N D++SVKA+++NGVL +TL KLSP+KIKGPR+V I  E
Sbjct: 125 DHWHRVERSYGKFWRQFRLPQNVDLDSVKAKMENGVLTLTLDKLSPDKIKGPRLVSIAGE 184

Query: 188 QPPAGELNKSGGPRQEL 189
               G LN S G +QEL
Sbjct: 185 DQQQGNLN-SDGVKQEL 195

The following BLAST results are available for this feature:
BLAST of Cla012373 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HSP41_SOYBN1.3e-5163.2922.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1[more]
HSP22_ARATH1.3e-4661.5922.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1[more]
HSP41_PEA1.7e-4654.4922.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1[more]
HS232_ORYSJ2.6e-3951.5323.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2[more]
HSP11_SOLLC1.4e-2948.9217.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1[more]
BLAST of Cla012373 vs. TrEMBL
Match NameE-valueIdentityDescription
H6TB46_CITLA6.2e-9397.73HSP20.3 OS=Citrullus lanatus PE=2 SV=1[more]
A0A0A0KSN3_CUCSA5.0e-8281.48Uncharacterized protein OS=Cucumis sativus GN=Csa_5G646740 PE=3 SV=1[more]
V7BHH5_PHAVU1.2e-5157.36Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G113700g PE=3 SV=1[more]
A0A0B2RDT3_GLYSO2.7e-5155.8422.0 kDa class IV heat shock protein OS=Glycine soja GN=glysoja_029966 PE=3 SV=1[more]
I1LC12_SOYBN2.7e-5155.84Uncharacterized protein OS=Glycine max GN=GLYMA_10G176400 PE=3 SV=1[more]
BLAST of Cla012373 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|315932726|gb|ADU55793.1|8.9e-9397.73HSP20.3 [Citrullus lanatus][more]
gi|659119141|ref|XP_008459498.1|2.6e-8482.54PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo][more]
gi|449447525|ref|XP_004141518.1|7.1e-8281.48PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis sativus][more]
gi|593686502|ref|XP_007143922.1|1.7e-5157.36hypothetical protein PHAVU_007G113700g [Phaseolus vulgaris][more]
gi|734398571|gb|KHN30529.1|3.8e-5155.8422.0 kDa class IV heat shock protein [Glycine soja][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0050896 response to stimulus
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0006950 response to stress
biological_process GO:0009408 response to heat
biological_process GO:0009987 cellular process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005788 endoplasmic reticulum lumen
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU77421watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012373Cla012373.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU77421WMU77421transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 64..165
score: 1.3
IPR002068Alpha crystallin/Hsp20 domainPROFILEPS01031HSP20coord: 64..154
score: 23
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 33..163
score: 5.7
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 58..165
score: 1.26
NoneNo IPR availablePANTHERPTHR11527:SF13522.0 KDA HEAT SHOCK PROTEINcoord: 31..176
score: 8.8