CsaV3_5G039380 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G039380
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr5 : 31145647 .. 31149580 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCGGTTCTTCTATTTGACCGATTCATAACTTCAAAACGTCTCCGGGTTTGGTTGAGTTTAAGAATTATTTCGAAGGCAATTGGAAGAAGCATGTCGTCGGTTTCAATACATCCCCATTTGAATCAATTGTTTGTAGCAGCGCTTGAAAAATGCAGTAATCTCAATCATCTCAAGCAACTTCAAGGATTTCTTATTTCACACGGTCATTCACAAACGCAGTTCTTCGCCTTCAAGCTTGTTCGCTTTTGCAACCTTACTCTTGCTGACTTATGTTATGCTCGCTACATTTTTGATAATCTAACTTCCCCAAATGTTTTTCTCTATACTGCAATGATCACAGCTTATGCCTCATATCCCGATCCTAAAGCCGCGTTTCTTTTGTACCGTAATATGGTCCGCCGTGGAGCCATTCGACCGAACAATTTTATCTACCCCCATGTCCTTAGATCTTGCCCTGATGTTTTGGGGTCCAATGCCACGAAAATGGTTCATACCCAGGTTCTGAAATCTGGATTTGGTGGATACCCAGTTGTTCAAACGGCCATTGTTGATTCCTATTCGCGGTTCTCTTCGGATATTGGGAGTGCAAGACAGATGTTCGATGAAATGCTAGAGAGAACTGTAGTGTCTTGGACGGCCATGATTTCAGGGTATGCGAGGCTTGGGAACTTTGATAGTGCAATTGAGTTGTTTGAAAGTATGCCGGAGAGGGATGTCCCTGCTTGGAATGCTCTTATTGCTGGTTGTGCTCAAAATGGATTCTTCTGTGAAGCGATTTGGTTGTTCAAAAGAATGGTTTTATTGGCACTAGAGGGTAATAATAATGATCGTGAAAATAAGCCGAATAAGACCACACTTGGATCTGCACTATCAGCTTGTGGACATACTGGGATGCTTCATCTTGGTAAGTGGATTCATGGTTATGTTTTCAAAACTTATCCTGGTCAGGATTCGTTTATCTCAAATGCTTTGCTAGATATGTATGGAAAATGTGGCAATTTAAAAGTTGCGAGGAGAGTTTTTGACATGATTACTTTAAAAAACTTGACATCATGGAATTCCTTGATAAATTGTCTTGCACTCCATGGCCATAGTGGAAGTGCAATTGATTTGTTTGCAGAGTTGATTCATTGTGGGGATGGTGTAAAACCAAATGAGGTTACCTTTGTGGGTGTGTTGAATGCTTGTACTCACGGAGGATTAGTTGAAAAAGGTTACTCATACTTTGAAATGATGAGGCGGGATTACGATATCGAGCCTCAGATTGAACACTTTGGGTGCTTGATAGACCTTCTGGGCCGTGCAGGGCGGTTTGAGGAAGCAATGGAAGTTGTGCGCGGCATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAATGCATGCAAAATCCATGGTCGTTCAGATTTAGCTGAATACTCGGTGAAAAAGTTGATCGAGATGGATCCAAAAAATGGCGGTTATAGAATTATGCTAGCTAATATATATGCCGAGTTTGGAAAGTGGGATGAGGTTCGGAAGGTTCGTAGGCTTTTGAAGGAGAAAAATGCTTATAAAACACCAGGTTGCAGTTGGATTGAGGTAGATAATCAGGTTTATCAGTTCTATTCTTTTGACATGTCACATCCCAGTGTAGAAGAAATATACAAAACTTTAGAAAGTATGATCAGCTTTATGTAAAAAGAAAATGAAGATTTGCTTCAAATTGAAGCATTTTCGACATTCCATGCTATTGCTGATCGGCTGATCGCCATTTATCAGATGAGAAAGTCGAACCACGAGAGGATCATGAAGCTCTACCAACCTTCTCTCTCCTTCCAGTTGCACAGTCTTCTTTGAGGTCTATAAAAAAAAAAAGCTCCATGAGAGAAGAATTATCTATTCTAAGCTTGAATTGGAGTATTGTTTTCTAAGTACATGACAATTGACAACATGAGCAAAACAGAAGAACAGCAATTGGAGGCAATTAAGTGATAGTTTAGACTTCAGAGATTTTTGCAAGCAACTTTGAACAAATTGTGTCTTCAATTTATATGCTTGTGTTGACCCTGAAACAACATGAAGGTAGTAGTATGATTCAATTGCTGATGATGATAAATAAAATGGCCAACCGGGAAAGGTTTCTGGAGTTCTGTGAACAAATTAATGACTCTAAGTCCTAAGGTATGTGACTGCTTTAGTTATGTCTACCACCAAGTTGTTCATGGACAACGAACATCTATCAATTCCTAAGTTTGAAGAATTGATATCTCAACGGTGAAATTTTCCATTTGGGAGATTGCTTTTTGTAGATGTTTTTGATAAGTTACAAAGAATAAGGCCCAGAATTTTTTGACTCCATTATATTTCTTTGATGTCCTTTGGAGGGGAAACCCACAATTTTTTTTTATGGGAAAAGGGAGAGATTTTGTATTTATTTTATGGAAAATGTTTTTTCTTATTTCAGCAAATTCATCAAAAAAAATTTGGTTGACTTTTGTACATCACAATTAAGAAAAAATACTTAAGATCCATAAATTATTTTAAAAATTAATAAAATAAATGGACTAATACAAAAAAATGAAATATGTAAATCAAATGATAAAATAACAAACTTAAAACAAGAAAGAACAATTAAAAAAAAAACCATGAGAAGACTTTGAAATAAATTTATATATATAAATCATTTGAAGAAAATGTAACTAAACATATTGATTTTATTTTTAGATTAAAAATGGCATTTTAGAAAACACTTTCTTTGTAAGTTAATCTGAAAAGTCCCTAAACCTATAATAAAATTCATAGTTTTGAGCTTTTCTTGTCCTAACTAATATTGATATTCAAACAATAATAAGATGAAACTTTCTCAACACATCTTAAATTATGAACAAAATAGTTCGATAGGATGCAAAAGATAGGTGAAGTGAAAAAAAATATTTCTTTTAAGTGCCTCTCAACTCCTAAGTGACACCTATTTTTAGCATTCAACAAATTCATCCATTCATAATTTGCCATTCGAAACAGTTTGTCTTTTCTTACAAAAAAAGAAAAAAAGAGGATCAATTTCTTTCATATGAAGTGGTGGAAAGAATGCAAAATGATGATATCATAGTATTAAATTTAACGTGTCGATGTTTCCATGTTGATATGTAACTAATCTAAATAACAAACATATTTGCTTATTTGATATTTGAAGATAATGATATGGTTTTTTAGCATCAGAAATGTCGAGAAGCAACCGGAGAACTCAGTCTCTCTGTTCCACTTTCCAACTAAATCCCGAATCTTCCATCTTCTTCTTCCTTAGAATTCCCTAGAAACTACCACAAAAGAGCCTATAAATCCCATTACCAATCGCAAATACCGCAAAAAAATGGCAGAATCAAAGGCAATACAACTCATCTTCTCCACAATCTTCATCTTTGCTTTTCTACTTACCTCATCCCATCCTTCCCTTCTTCCATTCATCGACCCTTTTGGGATTCTGGAACAAACCCCATTTGGATTACTCGAAAACGAAAACAAAGATGTTCTGCAACAACAACCACTCCCGCCGGCTAGAGTTGACTGGAAAGAGACCGCGGAGAGTCACGAGATCATGGTGGATGTGCCGGGAATGAACAAGGAGGAGCTGAAGATTGAATTAGACGAAGAAAACAGGGTTCTGAAAGTGATAGGAGAGAGGAAAAGAGAAGAGGAGAAACAGAGTGATCATTGGCATAGATTGGAACGAAGCTATGGAAAATTCTGGAGGCAATTGCGGTTGCCCGTTAATGCGGATTTGGAGTCCGTTAAAGCAAAGCTTGAGAATGGGGTTCTTAAGATCAGTTTGTTGAAGCTTTCGCAGGAGAAGATTAAGGGTCCGAGAGTGGTGGGGATTTTGGATGAACAACCGCCGGCGGGAGAGATGAACAAATCCGGTGCGGCCAAGCAGGAGTTGTGA

mRNA sequence

ATGGGTTCGGTTCTTCTATTTGACCGATTCATAACTTCAAAACGTCTCCGGGTTTGGTTGAGTTTAAGAATTATTTCGAAGGCAATTGGAAGAAGCATGTCGTCGGTTTCAATACATCCCCATTTGAATCAATTGTTTGTAGCAGCGCTTGAAAAATGCAGTAATCTCAATCATCTCAAGCAACTTCAAGGATTTCTTATTTCACACGGTCATTCACAAACGCAGTTCTTCGCCTTCAAGCTTGTTCGCTTTTGCAACCTTACTCTTGCTGACTTATGTTATGCTCGCTACATTTTTGATAATCTAACTTCCCCAAATGTTTTTCTCTATACTGCAATGATCACAGCTTATGCCTCATATCCCGATCCTAAAGCCGCGTTTCTTTTGTACCGTAATATGGTCCGCCGTGGAGCCATTCGACCGAACAATTTTATCTACCCCCATGTCCTTAGATCTTGCCCTGATGTTTTGGGGTCCAATGCCACGAAAATGGTTCATACCCAGGTTCTGAAATCTGGATTTGGTGGATACCCAGTTGTTCAAACGGCCATTGTTGATTCCTATTCGCGGTTCTCTTCGGATATTGGGAGTGCAAGACAGATGTTCGATGAAATGCTAGAGAGAACTGTAGTGTCTTGGACGGCCATGATTTCAGGGTATGCGAGGCTTGGGAACTTTGATAGTGCAATTGAGTTGTTTGAAAGTATGCCGGAGAGGGATGTCCCTGCTTGGAATGCTCTTATTGCTGGTTGTGCTCAAAATGGATTCTTCTGTGAAGCGATTTGGTTGTTCAAAAGAATGGTTTTATTGGCACTAGAGGGTAATAATAATGATCGTGAAAATAAGCCGAATAAGACCACACTTGGATCTGCACTATCAGCTTGTGGACATACTGGGATGCTTCATCTTGGTAAGTGGATTCATGGTTATGTTTTCAAAACTTATCCTGGTCAGGATTCGTTTATCTCAAATGCTTTGCTAGATATGTATGGAAAATGTGGCAATTTAAAAGTTGCGAGGAGAGTTTTTGACATGATTACTTTAAAAAACTTGACATCATGGAATTCCTTGATAAATTGTCTTGCACTCCATGGCCATAGTGGAAGTGCAATTGATTTGTTTGCAGAGTTGATTCATTGTGGGGATGGTGTAAAACCAAATGAGGTTACCTTTGTGGGTGTGTTGAATGCTTGTACTCACGGAGGATTAGTTGAAAAAGGTTACTCATACTTTGAAATGATGAGGCGGGATTACGATATCGAGCCTCAGATTGAACACTTTGGGTGCTTGATAGACCTTCTGGGCCGTGCAGGGCGGTTTGAGGAAGCAATGGAAGTTGTGCGCGGCATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAATGCATGCAAAATCCATGGTCGTTCAGATTTAGCTGAATACTCGGTGAAAAAGTTGATCGAGATGGATCCAAAAAATGGCGGTTATAGAATTATGCTAGCTAATATATATGCCGAGTTTGGAAAGTGGGATGAGGTTCGGAAGGTTCGTAGGCTTTTGAAGGAGAAAAATGCTTATAAAACACCAGGTTGCAGTTGGATTGAGGTAGATAATCAGAATTCCCTAGAAACTACCACAAAAGAGCCTATAAATCCCATTACCAATCGCAAATACCGCAAAAAAATGGCAGAATCAAAGGCAATACAACTCATCTTCTCCACAATCTTCATCTTTGCTTTTCTACTTACCTCATCCCATCCTTCCCTTCTTCCATTCATCGACCCTTTTGGGATTCTGGAACAAACCCCATTTGGATTACTCGAAAACGAAAACAAAGATGTTCTGCAACAACAACCACTCCCGCCGGCTAGAGTTGACTGGAAAGAGACCGCGGAGAGTCACGAGATCATGGTGGATGTGCCGGGAATGAACAAGGAGGAGCTGAAGATTGAATTAGACGAAGAAAACAGGGTTCTGAAAGTGATAGGAGAGAGGAAAAGAGAAGAGGAGAAACAGAGTGATCATTGGCATAGATTGGAACGAAGCTATGGAAAATTCTGGAGGCAATTGCGGTTGCCCGTTAATGCGGATTTGGAGTCCGTTAAAGCAAAGCTTGAGAATGGGGTTCTTAAGATCAGTTTGTTGAAGCTTTCGCAGGAGAAGATTAAGGGTCCGAGAGTGGTGGGGATTTTGGATGAACAACCGCCGGCGGGAGAGATGAACAAATCCGGTGCGGCCAAGCAGGAGTTGTGA

Coding sequence (CDS)

ATGGGTTCGGTTCTTCTATTTGACCGATTCATAACTTCAAAACGTCTCCGGGTTTGGTTGAGTTTAAGAATTATTTCGAAGGCAATTGGAAGAAGCATGTCGTCGGTTTCAATACATCCCCATTTGAATCAATTGTTTGTAGCAGCGCTTGAAAAATGCAGTAATCTCAATCATCTCAAGCAACTTCAAGGATTTCTTATTTCACACGGTCATTCACAAACGCAGTTCTTCGCCTTCAAGCTTGTTCGCTTTTGCAACCTTACTCTTGCTGACTTATGTTATGCTCGCTACATTTTTGATAATCTAACTTCCCCAAATGTTTTTCTCTATACTGCAATGATCACAGCTTATGCCTCATATCCCGATCCTAAAGCCGCGTTTCTTTTGTACCGTAATATGGTCCGCCGTGGAGCCATTCGACCGAACAATTTTATCTACCCCCATGTCCTTAGATCTTGCCCTGATGTTTTGGGGTCCAATGCCACGAAAATGGTTCATACCCAGGTTCTGAAATCTGGATTTGGTGGATACCCAGTTGTTCAAACGGCCATTGTTGATTCCTATTCGCGGTTCTCTTCGGATATTGGGAGTGCAAGACAGATGTTCGATGAAATGCTAGAGAGAACTGTAGTGTCTTGGACGGCCATGATTTCAGGGTATGCGAGGCTTGGGAACTTTGATAGTGCAATTGAGTTGTTTGAAAGTATGCCGGAGAGGGATGTCCCTGCTTGGAATGCTCTTATTGCTGGTTGTGCTCAAAATGGATTCTTCTGTGAAGCGATTTGGTTGTTCAAAAGAATGGTTTTATTGGCACTAGAGGGTAATAATAATGATCGTGAAAATAAGCCGAATAAGACCACACTTGGATCTGCACTATCAGCTTGTGGACATACTGGGATGCTTCATCTTGGTAAGTGGATTCATGGTTATGTTTTCAAAACTTATCCTGGTCAGGATTCGTTTATCTCAAATGCTTTGCTAGATATGTATGGAAAATGTGGCAATTTAAAAGTTGCGAGGAGAGTTTTTGACATGATTACTTTAAAAAACTTGACATCATGGAATTCCTTGATAAATTGTCTTGCACTCCATGGCCATAGTGGAAGTGCAATTGATTTGTTTGCAGAGTTGATTCATTGTGGGGATGGTGTAAAACCAAATGAGGTTACCTTTGTGGGTGTGTTGAATGCTTGTACTCACGGAGGATTAGTTGAAAAAGGTTACTCATACTTTGAAATGATGAGGCGGGATTACGATATCGAGCCTCAGATTGAACACTTTGGGTGCTTGATAGACCTTCTGGGCCGTGCAGGGCGGTTTGAGGAAGCAATGGAAGTTGTGCGCGGCATGAATATTGAACCAGATGAGGTTGTATGGGGTTCTTTACTAAATGCATGCAAAATCCATGGTCGTTCAGATTTAGCTGAATACTCGGTGAAAAAGTTGATCGAGATGGATCCAAAAAATGGCGGTTATAGAATTATGCTAGCTAATATATATGCCGAGTTTGGAAAGTGGGATGAGGTTCGGAAGGTTCGTAGGCTTTTGAAGGAGAAAAATGCTTATAAAACACCAGGTTGCAGTTGGATTGAGGTAGATAATCAGAATTCCCTAGAAACTACCACAAAAGAGCCTATAAATCCCATTACCAATCGCAAATACCGCAAAAAAATGGCAGAATCAAAGGCAATACAACTCATCTTCTCCACAATCTTCATCTTTGCTTTTCTACTTACCTCATCCCATCCTTCCCTTCTTCCATTCATCGACCCTTTTGGGATTCTGGAACAAACCCCATTTGGATTACTCGAAAACGAAAACAAAGATGTTCTGCAACAACAACCACTCCCGCCGGCTAGAGTTGACTGGAAAGAGACCGCGGAGAGTCACGAGATCATGGTGGATGTGCCGGGAATGAACAAGGAGGAGCTGAAGATTGAATTAGACGAAGAAAACAGGGTTCTGAAAGTGATAGGAGAGAGGAAAAGAGAAGAGGAGAAACAGAGTGATCATTGGCATAGATTGGAACGAAGCTATGGAAAATTCTGGAGGCAATTGCGGTTGCCCGTTAATGCGGATTTGGAGTCCGTTAAAGCAAAGCTTGAGAATGGGGTTCTTAAGATCAGTTTGTTGAAGCTTTCGCAGGAGAAGATTAAGGGTCCGAGAGTGGTGGGGATTTTGGATGAACAACCGCCGGCGGGAGAGATGAACAAATCCGGTGCGGCCAAGCAGGAGTTGTGA

Protein sequence

MGSVLLFDRFITSKRLRVWLSLRIISKAIGRSMSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQNSLETTTKEPINPITNRKYRKKMAESKAIQLIFSTIFIFAFLLTSSHPSLLPFIDPFGILEQTPFGLLENENKDVLQQQPLPPARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLERSYGKFWRQLRLPVNADLESVKAKLENGVLKISLLKLSQEKIKGPRVVGILDEQPPAGEMNKSGAAKQEL
Homology
[Close]
BLAST of CsaV3_5G039380 vs. NCBI nr
Match: KGN52599.1 (hypothetical protein Csa_5G646730 [Cucumis sativus])

HSP 1 Score: 991.5 bits (2562), Expect = 1.6e-285
Identity = 532/536 (99.25%), Postives = 533/536 (99.44%), Query Frame = 0 

Query: 1   MGSVLLFDRFITSKRLRVWLSLRIISKAIGRSMSSVSIHPHLNQLFVAALEKCSNLNHLK 60
           MGSVLLFDRFITSKRLRVWLSLRIISKAIGRSMSSVSIHPHLNQLFVAALEKCSNLNHLK
Sbjct: 1   MGSVLLFDRFITSKRLRVWLSLRIISKAIGRSMSSVSIHPHLNQLFVAALEKCSNLNHLK 60

Query: 61  QLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYASY 120
           QLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYASY
Sbjct: 61  QLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYASY 120

Query: 121 PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVV 180
           PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVV
Sbjct: 121 PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVV 180

Query: 181 QTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNXXXXXXXXXXXXXXX 240
           QTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNXXXXXXXXXXXXXXX
Sbjct: 181 QTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNKTTLGSALSACGHTGM 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNKTTLGSALSACGHTGM
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNKTTLGSALSACGHTGM 300

Query: 301 LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINC 360
           LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINC
Sbjct: 301 LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINC 360

Query: 361 LALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI 420
           LALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI
Sbjct: 361 LALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI 420

Query: 421 EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK 480
           EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK
Sbjct: 421 EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK 480

Query: 481 KLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQN 537
           KLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIE+   N
Sbjct: 481 KLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEMRKSN 536

[Close]
BLAST of CsaV3_5G039380 vs. NCBI nr
Match: XP_004141609.2 (PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Cucumis sativus])

HSP 1 Score: 939.9 bits (2428), Expect = 5.4e-270
Identity = 503/503 (100.00%), Postives = 503/503 (100.00%), Query Frame = 0 

Query: 33  MSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADL 92
           MSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADL
Sbjct: 1   MSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADL 60

Query: 93  CYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRS 152
           CYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRS
Sbjct: 61  CYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRS 120

Query: 153 CPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVS 212
           CPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVS
Sbjct: 121 CPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVS 180

Query: 213 WTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLAL 272
           WTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLAL
Sbjct: 181 WTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLAL 240

Query: 273 EGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK 332
           EGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK
Sbjct: 241 EGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK 300

Query: 333 CGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFV 392
           CGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFV
Sbjct: 301 CGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFV 360

Query: 393 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 452
           GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420

Query: 453 EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKV 512
           EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKV
Sbjct: 421 EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKV 480

Query: 513 RRLLKEKNAYKTPGCSWIEVDNQ 536
           RRLLKEKNAYKTPGCSWIEVDNQ
Sbjct: 481 RRLLKEKNAYKTPGCSWIEVDNQ 503

[Close]
BLAST of CsaV3_5G039380 vs. NCBI nr
Match: XP_008459497.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Cucumis melo])

HSP 1 Score: 920.6 bits (2378), Expect = 3.4e-264
Identity = 497/535 (92.90%), Postives = 510/535 (95.33%), Query Frame = 0 

Query: 1   MGSVLLFDRFITSKRLRVWLSLRIISKAIGRSMSSVSIHPHLNQLFVAALEKCSNLNHLK 60
           MG V LFDRFI SKRLRV       SK IGR+MSSVSI PHL QL VAALEKCSNLNHLK
Sbjct: 1   MGLVRLFDRFINSKRLRV-------SKVIGRNMSSVSIQPHLYQLVVAALEKCSNLNHLK 60

Query: 61  QLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYASY 120
           QLQGFLISHGHSQTQFFAFKLVRFCNLTL DLCYARYIFDNLTSPNV+LYTAMITAYA+Y
Sbjct: 61  QLQGFLISHGHSQTQFFAFKLVRFCNLTLTDLCYARYIFDNLTSPNVYLYTAMITAYAAY 120

Query: 121 PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVV 180
           PDPKAAFLLYRNMVR GAIRPN+FIYPHVL+SCPDVLGSNATKMVHTQVLKSGFG YPVV
Sbjct: 121 PDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKSCPDVLGSNATKMVHTQVLKSGFGRYPVV 180

Query: 181 QTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNXXXXXXXXXXXXXXX 240
           QTAIVDSYSRFSS IG+ARQMFDEM+ER+VVSWTAMISGYARLGN  XXXXXXXXXXXXX
Sbjct: 181 QTAIVDSYSRFSSVIGNARQMFDEMVERSVVSWTAMISGYARLGNFDXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNKTTLGSALSACGHTGM 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXX  LALEGNNNDRENKPNKTTL SALSACG+TGM
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSLALEGNNNDRENKPNKTTLASALSACGNTGM 300

Query: 301 LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINC 360
           LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLK+LTSWNSLINC
Sbjct: 301 LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKSLTSWNSLINC 360

Query: 361 LALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI 420
           LALHGHSGSAIDLFAEL+ CGDGVKP+EVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI
Sbjct: 361 LALHGHSGSAIDLFAELVQCGDGVKPDEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI 420

Query: 421 EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK 480
           EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK
Sbjct: 421 EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK 480

Query: 481 KLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQ 536
           KLIEMDPKNGGYRIMLANIYAE GKWDEVRKVR+LLKEKNAYKTPGCSWIEVDNQ
Sbjct: 481 KLIEMDPKNGGYRIMLANIYAELGKWDEVRKVRKLLKEKNAYKTPGCSWIEVDNQ 528

[Close]
BLAST of CsaV3_5G039380 vs. NCBI nr
Match: XP_022974048.1 (pentatricopeptide repeat-containing protein At1g33350 [Cucurbita maxima])

HSP 1 Score: 806.6 bits (2082), Expect = 7.1e-230
Identity = 437/502 (87.05%), Postives = 468/502 (93.23%), Query Frame = 0 

Query: 33  MSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADL 92
           M+SV + PHLNQL ++ LEKCS+LNHLKQLQGFLIS GHSQTQF+AFKLVRFCNLTL DL
Sbjct: 1   MASVPMQPHLNQLVLSVLEKCSHLNHLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDL 60

Query: 93  CYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRS 152
           CY+R+IFD+L+SPNV+LYTAMITAYAS PD KAAFLLYRNMVRRGA  PN+FIYPHVL+S
Sbjct: 61  CYSRFIFDHLSSPNVYLYTAMITAYASEPDSKAAFLLYRNMVRRGAPLPNHFIYPHVLKS 120

Query: 153 CPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVS 212
           CP++L SN TKMVH QVLKSGFGGYPVVQTAIVD+YSRF +DIG ARQ+FDEMLER+VVS
Sbjct: 121 CPELLESNGTKMVHAQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVS 180

Query: 213 WTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLAL 272
           WTAMISGYARLG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LAL
Sbjct: 181 WTAMISGYARLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAL 240

Query: 273 EGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK 332
           EG N +RE KPNK T+ SALS+CGHTGMLHLGKWIHGYVFKTY GQDSFISNALLDMYGK
Sbjct: 241 EG-NKERETKPNKITVASALSSCGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGK 300

Query: 333 CGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFV 392
           CGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSGSAIDLF EL+ C DGV+P+ VTFV
Sbjct: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCRDGVQPDAVTFV 360

Query: 393 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 452
           GVLNACTHGGLVEKGYSYF+MMR+DYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 420

Query: 453 EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKV 512
           EPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP+NGGYRIMLANIYAE   WDEVRKV
Sbjct: 421 EPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRKV 480

Query: 513 RRLLKEKNAYKTPGCSWIEVDN 535
           R+LLKE+NAYK PGCSWIEVDN
Sbjct: 481 RKLLKEQNAYKIPGCSWIEVDN 501

[Close]
BLAST of CsaV3_5G039380 vs. NCBI nr
Match: XP_023521314.1 (pentatricopeptide repeat-containing protein At1g33350-like [Cucurbita pepo subsp. pepo] >XP_023536054.1 pentatricopeptide repeat-containing protein At1g33350-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 803.1 bits (2073), Expect = 7.9e-229
Identity = 436/503 (86.68%), Postives = 467/503 (92.84%), Query Frame = 0 

Query: 33  MSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADL 92
           M+SV I PHLNQL ++ LEKCS+LN LKQLQGFLIS GHSQTQF+AFKLVRFCNLTL DL
Sbjct: 1   MASVPIQPHLNQLVLSVLEKCSHLNQLKQLQGFLISLGHSQTQFYAFKLVRFCNLTLTDL 60

Query: 93  CYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRS 152
           CY+R+IFD+L+SPNV+LYTAMITAYAS  D KAAFLLYRNMVRRG   PN+FIYPHVL+S
Sbjct: 61  CYSRFIFDHLSSPNVYLYTAMITAYASESDSKAAFLLYRNMVRRGDPLPNHFIYPHVLKS 120

Query: 153 CPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVS 212
           CP++L SN TKMVHTQVLKSGFGGYPVVQTAIVD+YSRF +DIG ARQ+FDEMLER+VVS
Sbjct: 121 CPELLESNGTKMVHTQVLKSGFGGYPVVQTAIVDAYSRFRTDIGIARQVFDEMLERSVVS 180

Query: 213 WTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLAL 272
           WTAM+SGYARLG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LAL
Sbjct: 181 WTAMVSGYARLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAL 240

Query: 273 EGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGK 332
           EG N +RE KPNK T+ SALSACGHTGMLHLGKWIHGYVFKTY GQDSFISNALLDMYGK
Sbjct: 241 EG-NKERETKPNKVTVASALSACGHTGMLHLGKWIHGYVFKTYLGQDSFISNALLDMYGK 300

Query: 333 CGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFV 392
           CGNLKVARRVFDMITLK+LTSWNSLINCLALHGHSGSAIDLF EL+ C DGVKP+ VTFV
Sbjct: 301 CGNLKVARRVFDMITLKSLTSWNSLINCLALHGHSGSAIDLFLELVQCEDGVKPDGVTFV 360

Query: 393 GVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNI 452
           GVLNACTHGGLVEKGYSYF+MMR+DYDIEPQIEHFGCLIDLLGRAGRFEEAMEVV+GMNI
Sbjct: 361 GVLNACTHGGLVEKGYSYFKMMRQDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVKGMNI 420

Query: 453 EPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKV 512
           EPDEVVWGSLLN CKIHGR DLAEYSVKKLIEMDP+NGGYRIMLANIYAE   WDEVR+V
Sbjct: 421 EPDEVVWGSLLNGCKIHGRLDLAEYSVKKLIEMDPENGGYRIMLANIYAELENWDEVRRV 480

Query: 513 RRLLKEKNAYKTPGCSWIEVDNQ 536
           R+LLKE+NAYK PGCSWIEVDNQ
Sbjct: 481 RKLLKEQNAYKIPGCSWIEVDNQ 502

[Close]
BLAST of CsaV3_5G039380 vs. TAIR10
Match: AT1G33350.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 400.6 bits (1028), Expect = 2.1e-111
Identity = 248/497 (49.90%), Postives = 315/497 (63.38%), Query Frame = 0 

Query: 42  LNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDN 101
           LNQ   A + K  +LNHLKQ+Q F+I  G S + F  FKL+                   
Sbjct: 23  LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLXXXXXXXXXXXXXXXXXXX 82

Query: 102 LTSPNVFLYTAMITAYASY--PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGS 161
              PN  LY A++TAY+S       +AF  +R MV R   RPN+FIYP VL+S P +  +
Sbjct: 83  XXXPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA 142

Query: 162 NATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISG 221
            +T +VHT + KSGF  Y VVQTA++ SY+   S I  ARQ+FDEM ER VVSWTAM+SG
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSG 202

Query: 222 YARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDR 281
           YAR G        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            
Sbjct: 203 YARSG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 262

Query: 282 ENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVA 341
                       LSAC  TG L L K IH + ++     D F+SN+L+D+YGKCGNL+ A
Sbjct: 263 XXXXXXXXXVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 322

Query: 342 RRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCG-DGVKPNEVTFVGVLNAC 401
             VF M + K+LT+WNS                   E++    + +KP+ +TF+G+LNAC
Sbjct: 323 SSVFKMASKKSLTAWNSXXXXXXXXXXXXXXXXXXEEMMKLNINDIKPDHITFIGLLNAC 382

Query: 402 THGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVV 461
           THGGLV KG  YF++M   + IEP+IEH+GCLIDLLGRAGRF+EA+EV+  M ++ DE +
Sbjct: 383 THGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAI 442

Query: 462 WGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKE 521
           WGSLLNACKIHG  DLAE +VK L+ ++P NGGY  M+AN+Y E G W+E R+ R+++K 
Sbjct: 443 WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 502

Query: 522 KNAYKTPGCSWIEVDNQ 536
           +NAYK PG S IE+DN+
Sbjct: 503 QNAYKPPGWSRIEIDNE 511

[Close]
BLAST of CsaV3_5G039380 vs. TAIR10
Match: AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-85
Identity = 212/505 (41.98%), Postives = 310/505 (61.39%), Query Frame = 0 

Query: 31  RSMSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLA 90
           R   S ++     +  ++ L  C N+ H+  +   +I   H Q  F  F+L+R C+ TL 
Sbjct: 17  RDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLD 76

Query: 91  DLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVL 150
            + YA  +F  +++PNV+LYTAMI  + S         LY  M+   ++ P+N++   VL
Sbjct: 77  SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMI-HNSVLPDNYVITSVL 136

Query: 151 RSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTV 210
           ++C         + +H QVLK GFG    V   +++ Y + S ++ +A++MFDEM +R  
Sbjct: 137 KAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGK-SGELVNAKKMFDEMPDRDH 196

Query: 211 VSWTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLL 270
           V+ T           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 197 VAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 256

Query: 271 ALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMY 330
            +           N+ T    LSAC   G L LG+W+H +V        +F+ NAL++MY
Sbjct: 257 XVSA---------NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMY 316

Query: 331 GKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVT 390
            +CG++  ARRVF ++  K++ S+N++I+ LA+HG S  AI+ F ++++   G +PN+VT
Sbjct: 317 SRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVN--RGFRPNQVT 376

Query: 391 FVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGM 450
            V +LNAC+HGGL++ G   F  M+R +++EPQIEH+GC++DLLGR GR EEA   +  +
Sbjct: 377 LVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI 436

Query: 451 NIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVR 510
            IEPD ++ G+LL+ACKIHG  +L E   K+L E +  + G  ++L+N+YA  GKW E  
Sbjct: 437 PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKEST 496

Query: 511 KVRRLLKEKNAYKTPGCSWIEVDNQ 536
           ++R  +++    K PGCS IEVDNQ
Sbjct: 497 EIRESMRDSGIEKEPGCSTIEVDNQ 503

[Close]
BLAST of CsaV3_5G039380 vs. TAIR10
Match: AT2G20540.1 (mitochondrial editing factor 21)

HSP 1 Score: 313.9 bits (803), Expect = 2.6e-85
Identity = 204/489 (41.72%), Postives = 311/489 (63.60%), Query Frame = 0 

Query: 46  FVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSP 105
           F+  L++  + N  K++   +I HG SQ+ F   K+V FC+  + D+ YA  +F+ +++P
Sbjct: 13  FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNP 72

Query: 106 NVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMV 165
           NVFLY ++I AY           +Y+ ++R+    P+ F +P + +SC  +      K V
Sbjct: 73  NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 132

Query: 166 HTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGN 225
           H  + K G   + V + A++D Y +F  D+  A ++FDEM ER                 
Sbjct: 133 HGHLCKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDXXXXXXXXXXXXXXXX 192

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNK 285
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   L  +E         P++
Sbjct: 193 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQLAGIE---------PDE 252

Query: 286 TTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDM 345
            +L S L +C   G L LGKWIH Y  +    + + + NAL++MY KCG +  A ++F  
Sbjct: 253 ISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 312

Query: 346 ITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVE 405
           +  K++ SW+++I+  A HG++  AI+ F E+      VKPN +TF+G+L+AC+H G+ +
Sbjct: 313 MEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRA--KVKPNGITFLGLLSACSHVGMWQ 372

Query: 406 KGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNA 465
           +G  YF+MMR+DY IEP+IEH+GCLID+L RAG+ E A+E+ + M ++PD  +WGSLL++
Sbjct: 373 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 432

Query: 466 CKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTP 525
           C+  G  D+A  ++  L+E++P++ G  ++LANIYA+ GKW++V ++R++++ +N  KTP
Sbjct: 433 CRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTP 488

Query: 526 GCSWIEVDN 535
           G S IEV+N
Sbjct: 493 GGSLIEVNN 488

[Close]
BLAST of CsaV3_5G039380 vs. TAIR10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 303.5 bits (776), Expect = 3.5e-82
Identity = 178/528 (33.71%), Postives = 275/528 (52.08%), Query Frame = 0 

Query: 44  QLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLT 103
           +L +      S+L+   ++   ++ +G  Q  F A KL+   +  L  + YAR +FD   
Sbjct: 81  ELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYS-DLGSVDYARKVFDKTR 140

Query: 104 SPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNAT- 163
              ++++ A+  A       +    LY  M R G +  + F Y +VL++C   + S  T 
Sbjct: 141 KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIG-VESDRFTYTYVLKAC---VASECTV 200

Query: 164 ------KMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAM 223
                 K +H  + + G+  +  + T +VD Y+RF   +  A  +F  M  R VVSW+AM
Sbjct: 201 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC-VDYASYVFGGMPVRNVVSWSAM 260

Query: 224 ISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNN 283
           I+ YA+ G                                                E   
Sbjct: 261 IACYAKNGKAFEALRTFR--------------------------------------EMMR 320

Query: 284 NDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSF--ISNALLDMYGKCG 343
             +++ PN  T+ S L AC     L  GK IHGY+ +   G DS   + +AL+ MYG+CG
Sbjct: 321 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR--GLDSILPVISALVTMYGRCG 380

Query: 344 NLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGV 403
            L+V +RVFD +  +++ SWNSLI+   +HG+   AI +F E++   +G  P  VTFV V
Sbjct: 381 KLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML--ANGASPTPVTFVSV 440

Query: 404 LNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEP 463
           L AC+H GLVE+G   FE M RD+ I+PQIEH+ C++DLLGRA R +EA ++V+ M  EP
Sbjct: 441 LGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEP 500

Query: 464 DEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRR 523
              VWGSLL +C+IHG  +LAE + ++L  ++PKN G  ++LA+IYAE   WDEV++V++
Sbjct: 501 GPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKK 559

Query: 524 LLKEKNAYKTPGCSWIEVDNQNSLETTTKEPINPITNR--KYRKKMAE 561
           LL+ +   K PG  W+EV  +      + +  NP+  +   +  K+AE
Sbjct: 561 LLEHRGLQKLPGRCWMEV-RRKMYSFVSVDEFNPLMEQIHAFLVKLAE 559

[Close]
BLAST of CsaV3_5G039380 vs. TAIR10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 301.2 bits (770), Expect = 1.8e-81
Identity = 177/539 (32.84%), Postives = 279/539 (51.76%), Query Frame = 0 

Query: 32  SMSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLI--SHGHSQTQFFAFKLVRFCNLTL 91
           S  S S   + +Q   +  E CS+++ LKQL  F +  ++       F +  +   + + 
Sbjct: 37  SSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSF 96

Query: 92  ADLCYARYIFDNLTSPNVFLYTAMITAYASYPDPK-AAFLLYRNMVRRGAIRPNNFIYPH 151
           +D+ YA  +FD++ + + F++  +I A A     K  AF+LYR M+ RG   P+   +P 
Sbjct: 97  SDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPF 156

Query: 152 VLRSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLER 211
           VL++C  + G +  K VH Q++K GFGG   V   ++  Y      +  AR++FDEM ER
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC-LDLARKVFDEMPER 216

Query: 212 TVVSWTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 271
           ++VSW +MI    R G                                            
Sbjct: 217 SLVSWNSMIDALVRFGEYDSALQLF----------------------------------- 276

Query: 272 LLALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYP---GQDSFISNA 331
                     R  +P+  T+ S LSAC   G L LG W H ++ +        D  + N+
Sbjct: 277 ------REMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 336

Query: 332 LLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVK 391
           L++MY KCG+L++A +VF  +  ++L SWN++I   A HG +  A++ F  ++   + V+
Sbjct: 337 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 396

Query: 392 PNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAME 451
           PN VTFVG+L AC H G V KG  YF+MM RDY IEP +EH+GC++DL+ RAG   EA++
Sbjct: 397 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 456

Query: 452 VVRGMNIEPDEVVWGSLLNACKIHGRS-DLAEYSVKKLI----EMDPKNG---GYRIMLA 511
           +V  M ++PD V+W SLL+AC   G S +L+E   + +I    + +  NG   G  ++L+
Sbjct: 457 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 516

Query: 512 NIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQNSLETTTKEPINPITNRKYRK 557
            +YA   +W++V  VR+L+ E    K PGCS IE+ N  S E    +  +P T + Y++
Sbjct: 517 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI-NGISHEFFAGDTSHPQTKQIYQQ 532

[Close]
BLAST of CsaV3_5G039380 vs. Swiss-Prot
Match: sp|Q9C501|PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E57 PE=2 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 3.8e-110
Identity = 248/497 (49.90%), Postives = 315/497 (63.38%), Query Frame = 0 

Query: 42  LNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDN 101
           LNQ   A + K  +LNHLKQ+Q F+I  G S + F  FKL+                   
Sbjct: 23  LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLXXXXXXXXXXXXXXXXXXX 82

Query: 102 LTSPNVFLYTAMITAYASY--PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGS 161
              PN  LY A++TAY+S       +AF  +R MV R   RPN+FIYP VL+S P +  +
Sbjct: 83  XXXPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA 142

Query: 162 NATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISG 221
            +T +VHT + KSGF  Y VVQTA++ SY+   S I  ARQ+FDEM ER VVSWTAM+SG
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSG 202

Query: 222 YARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDR 281
           YAR G        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            
Sbjct: 203 YARSG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 262

Query: 282 ENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVA 341
                       LSAC  TG L L K IH + ++     D F+SN+L+D+YGKCGNL+ A
Sbjct: 263 XXXXXXXXXVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 322

Query: 342 RRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCG-DGVKPNEVTFVGVLNAC 401
             VF M + K+LT+WNS                   E++    + +KP+ +TF+G+LNAC
Sbjct: 323 SSVFKMASKKSLTAWNSXXXXXXXXXXXXXXXXXXEEMMKLNINDIKPDHITFIGLLNAC 382

Query: 402 THGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVV 461
           THGGLV KG  YF++M   + IEP+IEH+GCLIDLLGRAGRF+EA+EV+  M ++ DE +
Sbjct: 383 THGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAI 442

Query: 462 WGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKE 521
           WGSLLNACKIHG  DLAE +VK L+ ++P NGGY  M+AN+Y E G W+E R+ R+++K 
Sbjct: 443 WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 502

Query: 522 KNAYKTPGCSWIEVDNQ 536
           +NAYK PG S IE+DN+
Sbjct: 503 QNAYKPPGWSRIEIDNE 511

[Close]
BLAST of CsaV3_5G039380 vs. Swiss-Prot
Match: sp|Q9FIF7|PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.8e-84
Identity = 212/505 (41.98%), Postives = 310/505 (61.39%), Query Frame = 0 

Query: 31  RSMSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLA 90
           R   S ++     +  ++ L  C N+ H+  +   +I   H Q  F  F+L+R C+ TL 
Sbjct: 17  RDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCS-TLD 76

Query: 91  DLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVL 150
            + YA  +F  +++PNV+LYTAMI  + S         LY  M+   ++ P+N++   VL
Sbjct: 77  SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMI-HNSVLPDNYVITSVL 136

Query: 151 RSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTV 210
           ++C         + +H QVLK GFG    V   +++ Y + S ++ +A++MFDEM +R  
Sbjct: 137 KAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGK-SGELVNAKKMFDEMPDRDH 196

Query: 211 VSWTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLL 270
           V+ T           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 197 VAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 256

Query: 271 ALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMY 330
            +           N+ T    LSAC   G L LG+W+H +V        +F+ NAL++MY
Sbjct: 257 XVSA---------NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMY 316

Query: 331 GKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVT 390
            +CG++  ARRVF ++  K++ S+N++I+ LA+HG S  AI+ F ++++   G +PN+VT
Sbjct: 317 SRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVN--RGFRPNQVT 376

Query: 391 FVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGM 450
            V +LNAC+HGGL++ G   F  M+R +++EPQIEH+GC++DLLGR GR EEA   +  +
Sbjct: 377 LVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI 436

Query: 451 NIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVR 510
            IEPD ++ G+LL+ACKIHG  +L E   K+L E +  + G  ++L+N+YA  GKW E  
Sbjct: 437 PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKEST 496

Query: 511 KVRRLLKEKNAYKTPGCSWIEVDNQ 536
           ++R  +++    K PGCS IEVDNQ
Sbjct: 497 EIRESMRDSGIEKEPGCSTIEVDNQ 503

[Close]
BLAST of CsaV3_5G039380 vs. Swiss-Prot
Match: sp|Q9SIL5|PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.7e-84
Identity = 204/489 (41.72%), Postives = 311/489 (63.60%), Query Frame = 0 

Query: 46  FVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSP 105
           F+  L++  + N  K++   +I HG SQ+ F   K+V FC+  + D+ YA  +F+ +++P
Sbjct: 13  FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCD-KIEDMDYATRLFNQVSNP 72

Query: 106 NVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMV 165
           NVFLY ++I AY           +Y+ ++R+    P+ F +P + +SC  +      K V
Sbjct: 73  NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 132

Query: 166 HTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGN 225
           H  + K G   + V + A++D Y +F  D+  A ++FDEM ER                 
Sbjct: 133 HGHLCKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDXXXXXXXXXXXXXXXX 192

Query: 226 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNK 285
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   L  +E         P++
Sbjct: 193 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMQLAGIE---------PDE 252

Query: 286 TTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDM 345
            +L S L +C   G L LGKWIH Y  +    + + + NAL++MY KCG +  A ++F  
Sbjct: 253 ISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 312

Query: 346 ITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVE 405
           +  K++ SW+++I+  A HG++  AI+ F E+      VKPN +TF+G+L+AC+H G+ +
Sbjct: 313 MEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRA--KVKPNGITFLGLLSACSHVGMWQ 372

Query: 406 KGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNA 465
           +G  YF+MMR+DY IEP+IEH+GCLID+L RAG+ E A+E+ + M ++PD  +WGSLL++
Sbjct: 373 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 432

Query: 466 CKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTP 525
           C+  G  D+A  ++  L+E++P++ G  ++LANIYA+ GKW++V ++R++++ +N  KTP
Sbjct: 433 CRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTP 488

Query: 526 GCSWIEVDN 535
           G S IEV+N
Sbjct: 493 GGSLIEVNN 488

[Close]
BLAST of CsaV3_5G039380 vs. Swiss-Prot
Match: sp|Q9STF3|PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 6.4e-81
Identity = 178/528 (33.71%), Postives = 275/528 (52.08%), Query Frame = 0 

Query: 44  QLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLT 103
           +L +      S+L+   ++   ++ +G  Q  F A KL+   +  L  + YAR +FD   
Sbjct: 81  ELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYS-DLGSVDYARKVFDKTR 140

Query: 104 SPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNAT- 163
              ++++ A+  A       +    LY  M R G +  + F Y +VL++C   + S  T 
Sbjct: 141 KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIG-VESDRFTYTYVLKAC---VASECTV 200

Query: 164 ------KMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAM 223
                 K +H  + + G+  +  + T +VD Y+RF   +  A  +F  M  R VVSW+AM
Sbjct: 201 NHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC-VDYASYVFGGMPVRNVVSWSAM 260

Query: 224 ISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNN 283
           I+ YA+ G                                                E   
Sbjct: 261 IACYAKNGKAFEALRTFR--------------------------------------EMMR 320

Query: 284 NDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSF--ISNALLDMYGKCG 343
             +++ PN  T+ S L AC     L  GK IHGY+ +   G DS   + +AL+ MYG+CG
Sbjct: 321 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR--GLDSILPVISALVTMYGRCG 380

Query: 344 NLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGV 403
            L+V +RVFD +  +++ SWNSLI+   +HG+   AI +F E++   +G  P  VTFV V
Sbjct: 381 KLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML--ANGASPTPVTFVSV 440

Query: 404 LNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEP 463
           L AC+H GLVE+G   FE M RD+ I+PQIEH+ C++DLLGRA R +EA ++V+ M  EP
Sbjct: 441 LGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEP 500

Query: 464 DEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRR 523
              VWGSLL +C+IHG  +LAE + ++L  ++PKN G  ++LA+IYAE   WDEV++V++
Sbjct: 501 GPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKK 559

Query: 524 LLKEKNAYKTPGCSWIEVDNQNSLETTTKEPINPITNR--KYRKKMAE 561
           LL+ +   K PG  W+EV  +      + +  NP+  +   +  K+AE
Sbjct: 561 LLEHRGLQKLPGRCWMEV-RRKMYSFVSVDEFNPLMEQIHAFLVKLAE 559

[Close]
BLAST of CsaV3_5G039380 vs. Swiss-Prot
Match: sp|Q0WQW5|PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 301.2 bits (770), Expect = 3.2e-80
Identity = 177/539 (32.84%), Postives = 279/539 (51.76%), Query Frame = 0 

Query: 32  SMSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLI--SHGHSQTQFFAFKLVRFCNLTL 91
           S  S S   + +Q   +  E CS+++ LKQL  F +  ++       F +  +   + + 
Sbjct: 37  SSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSF 96

Query: 92  ADLCYARYIFDNLTSPNVFLYTAMITAYASYPDPK-AAFLLYRNMVRRGAIRPNNFIYPH 151
           +D+ YA  +FD++ + + F++  +I A A     K  AF+LYR M+ RG   P+   +P 
Sbjct: 97  SDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPF 156

Query: 152 VLRSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLER 211
           VL++C  + G +  K VH Q++K GFGG   V   ++  Y      +  AR++FDEM ER
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC-LDLARKVFDEMPER 216

Query: 212 TVVSWTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 271
           ++VSW +MI    R G                                            
Sbjct: 217 SLVSWNSMIDALVRFGEYDSALQLF----------------------------------- 276

Query: 272 LLALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYP---GQDSFISNA 331
                     R  +P+  T+ S LSAC   G L LG W H ++ +        D  + N+
Sbjct: 277 ------REMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 336

Query: 332 LLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVK 391
           L++MY KCG+L++A +VF  +  ++L SWN++I   A HG +  A++ F  ++   + V+
Sbjct: 337 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 396

Query: 392 PNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAME 451
           PN VTFVG+L AC H G V KG  YF+MM RDY IEP +EH+GC++DL+ RAG   EA++
Sbjct: 397 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 456

Query: 452 VVRGMNIEPDEVVWGSLLNACKIHGRS-DLAEYSVKKLI----EMDPKNG---GYRIMLA 511
           +V  M ++PD V+W SLL+AC   G S +L+E   + +I    + +  NG   G  ++L+
Sbjct: 457 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 516

Query: 512 NIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQNSLETTTKEPINPITNRKYRK 557
            +YA   +W++V  VR+L+ E    K PGCS IE+ N  S E    +  +P T + Y++
Sbjct: 517 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI-NGISHEFFAGDTSHPQTKQIYQQ 532

[Close]
BLAST of CsaV3_5G039380 vs. TrEMBL
Match: tr|A0A0A0KUN2|A0A0A0KUN2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646730 PE=4 SV=1)

HSP 1 Score: 991.5 bits (2562), Expect = 1.0e-285
Identity = 532/536 (99.25%), Postives = 533/536 (99.44%), Query Frame = 0 

Query: 1   MGSVLLFDRFITSKRLRVWLSLRIISKAIGRSMSSVSIHPHLNQLFVAALEKCSNLNHLK 60
           MGSVLLFDRFITSKRLRVWLSLRIISKAIGRSMSSVSIHPHLNQLFVAALEKCSNLNHLK
Sbjct: 1   MGSVLLFDRFITSKRLRVWLSLRIISKAIGRSMSSVSIHPHLNQLFVAALEKCSNLNHLK 60

Query: 61  QLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYASY 120
           QLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYASY
Sbjct: 61  QLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYASY 120

Query: 121 PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVV 180
           PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVV
Sbjct: 121 PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVV 180

Query: 181 QTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNXXXXXXXXXXXXXXX 240
           QTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNXXXXXXXXXXXXXXX
Sbjct: 181 QTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNKTTLGSALSACGHTGM 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNKTTLGSALSACGHTGM
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNKTTLGSALSACGHTGM 300

Query: 301 LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINC 360
           LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINC
Sbjct: 301 LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINC 360

Query: 361 LALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI 420
           LALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI
Sbjct: 361 LALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI 420

Query: 421 EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK 480
           EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK
Sbjct: 421 EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK 480

Query: 481 KLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQN 537
           KLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIE+   N
Sbjct: 481 KLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEMRKSN 536

[Close]
BLAST of CsaV3_5G039380 vs. TrEMBL
Match: tr|A0A1S3CAA7|A0A1S3CAA7_CUCME (pentatricopeptide repeat-containing protein At1g33350 OS=Cucumis melo OX=3656 GN=LOC103498615 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 2.2e-264
Identity = 497/535 (92.90%), Postives = 510/535 (95.33%), Query Frame = 0 

Query: 1   MGSVLLFDRFITSKRLRVWLSLRIISKAIGRSMSSVSIHPHLNQLFVAALEKCSNLNHLK 60
           MG V LFDRFI SKRLRV       SK IGR+MSSVSI PHL QL VAALEKCSNLNHLK
Sbjct: 1   MGLVRLFDRFINSKRLRV-------SKVIGRNMSSVSIQPHLYQLVVAALEKCSNLNHLK 60

Query: 61  QLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITAYASY 120
           QLQGFLISHGHSQTQFFAFKLVRFCNLTL DLCYARYIFDNLTSPNV+LYTAMITAYA+Y
Sbjct: 61  QLQGFLISHGHSQTQFFAFKLVRFCNLTLTDLCYARYIFDNLTSPNVYLYTAMITAYAAY 120

Query: 121 PDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVV 180
           PDPKAAFLLYRNMVR GAIRPN+FIYPHVL+SCPDVLGSNATKMVHTQVLKSGFG YPVV
Sbjct: 121 PDPKAAFLLYRNMVRHGAIRPNHFIYPHVLKSCPDVLGSNATKMVHTQVLKSGFGRYPVV 180

Query: 181 QTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNXXXXXXXXXXXXXXX 240
           QTAIVDSYSRFSS IG+ARQMFDEM+ER+VVSWTAMISGYARLGN  XXXXXXXXXXXXX
Sbjct: 181 QTAIVDSYSRFSSVIGNARQMFDEMVERSVVSWTAMISGYARLGNFDXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDRENKPNKTTLGSALSACGHTGM 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXX  LALEGNNNDRENKPNKTTL SALSACG+TGM
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSLALEGNNNDRENKPNKTTLASALSACGNTGM 300

Query: 301 LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINC 360
           LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLK+LTSWNSLINC
Sbjct: 301 LHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKSLTSWNSLINC 360

Query: 361 LALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI 420
           LALHGHSGSAIDLFAEL+ CGDGVKP+EVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI
Sbjct: 361 LALHGHSGSAIDLFAELVQCGDGVKPDEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDI 420

Query: 421 EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK 480
           EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK
Sbjct: 421 EPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVK 480

Query: 481 KLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQ 536
           KLIEMDPKNGGYRIMLANIYAE GKWDEVRKVR+LLKEKNAYKTPGCSWIEVDNQ
Sbjct: 481 KLIEMDPKNGGYRIMLANIYAELGKWDEVRKVRKLLKEKNAYKTPGCSWIEVDNQ 528

[Close]
BLAST of CsaV3_5G039380 vs. TrEMBL
Match: tr|A0A2I4FR92|A0A2I4FR92_9ROSI (pentatricopeptide repeat-containing protein At1g33350 OS=Juglans regia OX=51240 GN=LOC109001376 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 9.3e-186
Identity = 365/505 (72.28%), Postives = 424/505 (83.96%), Query Frame = 0 

Query: 31  RSMSSVSIHPHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLA 90
           R+M SV   P LNQ  +A L KC++LNHLKQLQ FL + GHSQTQF+AFKLVRFC L+LA
Sbjct: 27  RTMHSVRNQPDLNQHVLAILAKCNHLNHLKQLQAFLTTLGHSQTQFYAFKLVRFCALSLA 86

Query: 91  DLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVL 150
           +  YAR+IFD L SPNV+LYTAMITAYAS PD ++AF+LYRNMV RG   PN+F+YPHVL
Sbjct: 87  NFSYARFIFDQLHSPNVYLYTAMITAYASRPDHESAFVLYRNMVSRGRPPPNHFVYPHVL 146

Query: 151 RSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTV 210
           +SCP+   S+ TKMVH Q+LKSGFG Y VV+TA+VDSYSR  SDI SARQ FDEM ++ V
Sbjct: 147 QSCPEAWESHGTKMVHAQILKSGFGRYSVVETALVDSYSRICSDIISARQAFDEMYDKNV 206

Query: 211 VSWTAMISGYARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLL 270
           VSWTAMISGY RLG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 207 VSWTAMISGYTRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNF 266

Query: 271 ALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMY 330
           ALEG +  R N+PN+ T+  AL ACGHTGML LGKWIHGYV+K     ++ ISNAL+DMY
Sbjct: 267 ALEGQH--RGNRPNQITVICALPACGHTGMLQLGKWIHGYVYKNRINNNTLISNALVDMY 326

Query: 331 GKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVT 390
           GKCG+L+ ARRVFDM + K +TSWNS+IN  ALHG S  AI++F E++ C D V+P+EVT
Sbjct: 327 GKCGSLEEARRVFDMTSKKTVTSWNSMINSFALHGQSERAINMFVEMMQCEDDVRPDEVT 386

Query: 391 FVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGM 450
           FVG+LNAC HGGL+EKG SYFE+M +DY IEP+IEHFGCLIDLLGRAGRFEEAMEV R M
Sbjct: 387 FVGLLNACAHGGLIEKGLSYFELMTQDYRIEPKIEHFGCLIDLLGRAGRFEEAMEVARRM 446

Query: 451 NIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVR 510
           ++EPDEVVWGSLLN CKIHGR+DLAE++VKKLIE+DP NGGY IMLANIY E G+WDEVR
Sbjct: 447 SMEPDEVVWGSLLNGCKIHGRTDLAEFAVKKLIEIDPNNGGYGIMLANIYGELGRWDEVR 506

Query: 511 KVRRLLKEKNAYKTPGCSWIEVDNQ 536
           KVR+ L+E+++YKTPGCSWIEVDNQ
Sbjct: 507 KVRKKLQEQSSYKTPGCSWIEVDNQ 529

[Close]
BLAST of CsaV3_5G039380 vs. TrEMBL
Match: tr|A0A2R6QRA6|A0A2R6QRA6_ACTCH (Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14269 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.6e-182
Identity = 357/496 (71.98%), Postives = 418/496 (84.27%), Query Frame = 0 

Query: 40  PHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIF 99
           P LN   +A LE+C+++NHLKQLQ FLI+ GH  TQFFAFKLVRFC L L +L YAR IF
Sbjct: 9   PTLNHHVLAILERCNHINHLKQLQAFLIALGHGHTQFFAFKLVRFCTLALVNLPYARSIF 68

Query: 100 DNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGS 159
           D+LTSPNVFLYTAM+TAY+S  D K+A LLYR+MVRR + RPN+FI+PHVL+SCP+VLGS
Sbjct: 69  DHLTSPNVFLYTAMVTAYSSRSDHKSALLLYRDMVRRKSPRPNHFIFPHVLKSCPEVLGS 128

Query: 160 NATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISG 219
             T++VHTQ++KSGF  YPVVQTA++DSYSRF SD+G+AR++FDEM ER VVSWTAM+SG
Sbjct: 129 RGTELVHTQIVKSGFAQYPVVQTALLDSYSRFCSDLGTARKVFDEMSERNVVSWTAMVSG 188

Query: 220 YARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDR 279
           YARL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +       + 
Sbjct: 189 YARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTM-------EE 248

Query: 280 ENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVA 339
           +N+PN+ T+  +LSACGHTGML LG+ IHGY+++   G DSFISNAL+DMYGKCGNLK A
Sbjct: 249 DNRPNQVTVVCSLSACGHTGMLQLGRCIHGYIYRYGLGSDSFISNALVDMYGKCGNLKEA 308

Query: 340 RRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACT 399
           RRVFD  + ++LTSWNS+INC ALHG S  AI +F E++ C D V P+ VTFVG+LNACT
Sbjct: 309 RRVFDKTSKRSLTSWNSMINCFALHGQSEGAIRVFEEMMECVDDVIPDGVTFVGLLNACT 368

Query: 400 HGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVW 459
           HGGLVE+G  YFE M RDY IEPQIEH+GCLIDLLGRAGRFEEAM VVRGM + PDEVVW
Sbjct: 369 HGGLVEQGQFYFESMIRDYRIEPQIEHYGCLIDLLGRAGRFEEAMGVVRGMRMPPDEVVW 428

Query: 460 GSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEK 519
           GSLLN CKIHGR DLAE++VKKL+E+DPKNGGY  MLAN+Y E GKWDEVR VR++LKE+
Sbjct: 429 GSLLNGCKIHGRIDLAEFAVKKLVEIDPKNGGYGAMLANVYVESGKWDEVRTVRQMLKEQ 488

Query: 520 NAYKTPGCSWIEVDNQ 536
           NAYKTPGCSWIEVDN+
Sbjct: 489 NAYKTPGCSWIEVDNR 497

[Close]
BLAST of CsaV3_5G039380 vs. TrEMBL
Match: tr|A0A067KNV4|A0A067KNV4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06694 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.3e-179
Identity = 354/496 (71.37%), Postives = 415/496 (83.67%), Query Frame = 0 

Query: 40  PHLNQLFVAALEKCSNLNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIF 99
           P+LNQL +A L KC+N +HLKQLQ FL + GHSQTQF+AFKLVRFC L L DL YARYIF
Sbjct: 10  PNLNQLVLAILSKCNNFSHLKQLQSFLTALGHSQTQFYAFKLVRFCILKLCDLNYARYIF 69

Query: 100 DNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGS 159
           D+L  PN++L TAM+TAYAS PD  +AF LYRNMVR G  +PN+FI+PHVL+SC      
Sbjct: 70  DHLYYPNIYLCTAMVTAYASKPDHLSAFELYRNMVRGGHPKPNHFIFPHVLKSC------ 129

Query: 160 NATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISG 219
             TK+VH Q+ KSGF  YPVVQTA+VDSYSR  SDIG AR++FDEM ER VVSWTAMISG
Sbjct: 130 QTTKLVHAQIAKSGFSQYPVVQTALVDSYSRSPSDIGFARKLFDEMSERNVVSWTAMISG 189

Query: 220 YARLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLALEGNNNDR 279
           YAR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVL++    +  +
Sbjct: 190 YARFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVSQTAEH--Q 249

Query: 280 ENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVA 339
           +++PN+ T+  ALSACGHTGML LGKWIHGYV++   G  SF+S+AL+DMYGKCG+LK A
Sbjct: 250 QDRPNQVTVVCALSACGHTGMLQLGKWIHGYVYRNNLGYGSFVSSALMDMYGKCGSLKEA 309

Query: 340 RRVFDMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACT 399
           RRVFDM + K+LTSWNS+INC ALHG S  AI +F E++  GD V+P+EVTFVG+LNAC 
Sbjct: 310 RRVFDMTSKKSLTSWNSMINCFALHGQSERAIGIFEEMMQHGDDVRPDEVTFVGLLNACN 369

Query: 400 HGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVW 459
           HGGLVEKG SYF MM ++Y +EPQIEH+GCLID+LGRAGRFEEA+EVVR M IEPDEVVW
Sbjct: 370 HGGLVEKGRSYFHMMTQNYGLEPQIEHYGCLIDILGRAGRFEEALEVVRRMKIEPDEVVW 429

Query: 460 GSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEK 519
           GSLLN CK+HG +DLAE+SVKKLIE++PKNGGY  MLAN+Y + GKWDEVRKVR++LKE+
Sbjct: 430 GSLLNGCKVHGHTDLAEFSVKKLIEINPKNGGYGTMLANLYGQLGKWDEVRKVRKMLKEQ 489

Query: 520 NAYKTPGCSWIEVDNQ 536
           NAYKTPGCSWIEVDN+
Sbjct: 490 NAYKTPGCSWIEVDNE 497

The following BLAST results are available for this feature:
BLAST of CsaV3_5G039380 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52599.11.6e-28599.25hypothetical protein Csa_5G646730 [Cucumis sativus][more]
XP_004141609.25.4e-270100.00PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Cucumis sativu... [more]
XP_008459497.13.4e-26492.90PREDICTED: pentatricopeptide repeat-containing protein At1g33350 [Cucumis melo][more]
XP_022974048.17.1e-23087.05pentatricopeptide repeat-containing protein At1g33350 [Cucurbita maxima][more]
XP_023521314.17.9e-22986.68pentatricopeptide repeat-containing protein At1g33350-like [Cucurbita pepo subsp... [more]
BLAST of CsaV3_5G039380 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G33350.12.1e-11149.90Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G59200.11.5e-8541.98Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G20540.12.6e-8541.72mitochondrial editing factor 21[more]
AT3G46790.13.5e-8233.71Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G59720.11.8e-8132.84Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsaV3_5G039380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C501|PPR70_ARATH3.8e-11049.90Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana OX... [more]
sp|Q9FIF7|PP435_ARATH2.8e-8441.98Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS... [more]
sp|Q9SIL5|PP165_ARATH4.7e-8441.72Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
sp|Q9STF3|PP265_ARATH6.4e-8133.71Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
sp|Q0WQW5|PPR85_ARATH3.2e-8032.84Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
BLAST of CsaV3_5G039380 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KUN2|A0A0A0KUN2_CUCSA1.0e-28599.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G646730 PE=4 SV=1[more]
tr|A0A1S3CAA7|A0A1S3CAA7_CUCME2.2e-26492.90pentatricopeptide repeat-containing protein At1g33350 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2I4FR92|A0A2I4FR92_9ROSI9.3e-18672.28pentatricopeptide repeat-containing protein At1g33350 OS=Juglans regia OX=51240 ... [more]
tr|A0A2R6QRA6|A0A2R6QRA6_ACTCH1.6e-18271.98Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensi... [more]
tr|A0A067KNV4|A0A067KNV4_JATCU1.3e-17971.37Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06694 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR008978HSP20-like_chaperone
IPR002885Pentatricopeptide_repeat
IPR002068A-crystallin/Hsp20_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0050896 response to stimulus
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G039380.1CsaV3_5G039380.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 641..661
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 40..537
NoneNo IPR availablePANTHERPTHR24015:SF1010SUBFAMILY NOT NAMEDcoord: 40..537
NoneNo IPR availableCDDcd06472ACD_ScHsp26_likecoord: 620..712
e-value: 9.97322E-46
score: 157.467
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 622..722
e-value: 2.7E-25
score: 88.4
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 610..729
score: 24.285
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 109..137
e-value: 0.27
score: 11.5
coord: 211..240
e-value: 5.8E-9
score: 35.5
coord: 389..417
e-value: 0.059
score: 13.6
coord: 243..268
e-value: 1.4E-4
score: 21.8
coord: 324..347
e-value: 0.096
score: 12.9
coord: 427..450
e-value: 0.01
score: 15.9
coord: 353..381
e-value: 9.7E-4
score: 19.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 353..381
e-value: 0.002
score: 16.2
coord: 427..450
e-value: 9.4E-4
score: 17.2
coord: 389..422
e-value: 0.0022
score: 16.1
coord: 211..241
e-value: 4.4E-8
score: 30.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 244..274
score: 6.489
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..417
score: 7.684
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 423..453
score: 7.377
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 106..140
score: 8.714
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 354..384
score: 5.163
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 209..243
score: 12.189
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 455..489
score: 6.654
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 319..353
score: 8.495
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 177..208
score: 6.643
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 588..725
e-value: 2.2E-32
score: 113.8
IPR008978HSP20-like chaperoneSUPERFAMILYSSF49764HSP20-like chaperonescoord: 617..722
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 159..315
e-value: 5.3E-25
score: 90.4
coord: 321..548
e-value: 2.7E-40
score: 140.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 220..264
coord: 462..511