Cla011582 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla011582
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Vesicle-associated membrane protein-associated protein (AHRD V1 ***- Q1ANA7_WHEAT); contains Interpro domain(s) IPR016763 Vesicle-associated membrane protein
Location	Chr1 : 4046943 .. 4050353 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTGTGAGTTCATCTTTTTTTTTTTTCTTTTCTTTTCTGGGAGATTTCCTTCTTGTGGATCTGTTTTCAGGGTTCTTTTTTGTCTTTTGTTTTGATTTCATTTCTGCTTAATTTGTTTTTGTTTTCTTTGTTTCTTTCTCGTTAGTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGTGTGTTTTGTTTCTTTCTGTTTGAATCCTTCTGGGTTTGATTCAATTTGTTTGATTTGCGTAATTGATCTTTTCTACTGTGAAATGCTTTGGTACTCGTAGTATTAAGCTGTTCTGTATTTGGAATGTAGGCGTCTGCACTCTTTTTTCTCATTTCTTTCGCCCTTCTCTCTTGATGTATCTGTCTGGCGTCAGATCATGTTGTGAAATTTGTTAATTTCGTCCATTTTCAATTAGCTTGTATTTGAATACTTTGTTCTATGTGTTTTGTCCACTTAAATTAAATTGATCCTTTTCTAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGGTGCCAAATGCCAATATCACTTATTGTCATTCGTAGTTTTAAATTTTCAAATTAGTTTTTTGGTTACTGATATAGAGAGTACTTTGTTGTCTAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGGTATATTTAGTGTGAATGTTTAAAGCTTCTGGTTAGTATTAGCATTCTACTTTTATTTATGGGCGTGGGGTTTGCAGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGTGAGTAGTTGGGTTCTCTTTTTTTCCTATTCGTTCTTCTGCACAGTTGATTGACACACCTTCACCTTCTGTTTGTAGGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGTAAAATAATAGGAAGATTGTTGGTTTTCTATAGGTGTAAAGTTTTATGTCTGCAGATAATATAGATGATTCTCTCTTTTCTTTTTGGTAATTCTGATGCCTGATTTATGTGCTCTCTCTTTTCTATTCGGTAATTCTGATGCCTGATTTATGTGCATAGCTTGTGATGTAATTAAAATTTTCTCCTCCAAATTTCCATTTCTCTTATTATTATTATTATTATTTTTTATTAGATAGAACTCAATGCTAATGTGTGACCTTGTGATTGAAGTGTCACTCTGAGCAGTGAACAATAAAATTTTCTCGGGGCAGTATTCTATAGTAGTTAACTGTACACTTGTGAAGTTTTGGGTGAACTTGTTACATGATAGAAGTATTTGTTTTGTAAAGACTGCTCAAAATGGTTAGCTATACTTTAAGCATATTTTGTTGCATTCTAATCTTAAATGAAATCATTATGTTTCATTGTAGTTCTTAGTGTTAACATACAGGTGGATGCAACTTCCTTGGCATAATATTTGTAATACTTGAAGATTTACTTTTGAAATTTTGTTTAAACATGCTGAGTGCTTATTTTGTATGGATTTCTTATAATGGTTCGGTCATGTATATGATCTTTGATCATATTTCCTAACTTTAACGGAACCAGTATTACATGATAACAGTATTTTCATCACAAAACAATAAATTTAACATGATACTGCTATTGTTAATCTATGCATGGATACTGTTGGCATAATCTCGTCCCCAAGTATTGCAATATTGGGATAGAACTACCAAGAATTGCCTAGCAGGAAGAGGTAAAAGTGGATATTTTTGATGTCATAAGTTCAAGCCAGGATTATTTTTCCTTTTCTCCAGTGCCAAATAAAGAGTTAGGATAGGATACATCCACTTGGAGAGAACCTTCCTGAACTGTTGACTTGAACGATCCTTTACCTATGAAAGAATGATGCTATATTCTTGTTTTGCTGCTGTGTATTAAACTCTTTCCAAAGTTTCCTGGCAACTAATCGATTCTCCAAAGTATGTTTTATGCATTCAGTTCGGTTTGCTTCTTCGTTGAATGTTGTAAAATTCCCCATCTGTTCCTTGGCATGACTATCCAGTTAAATTTTCTAACACAGCTAATCAATCAGTTCTCTTTGCCAAAAGATAACTAAGCTAAGCTCAGGACCACCACACCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCACCCAATAATAGACAGAAACTGCTTCAATCTTTCAAGATATAATTTCTTTTATGTGGTACTTCGTCCCTTTCCTGCAGAACTTTTTGTTGATACCTGAAAGTACTGTAATTCACAAGTCCAGTGACCCATGGATCTCTCGTTCTTGTTTCTTTAAACAAAAATGTTGATTTTCTTCTTTGTTTGTGCAATGTCCTCAAACTTTTATCATGGTTCTCAGATGTTTTTAAATTATTCGGCACTATGAAGATGGTTTGATTGACTAAATCCTGGGCCACTGCAGCTATTTGTGTACGTGTGTGTGCGTTTTCATGTATGCATATACTGTACTTTTTACTTCTAGCAGGATGCTTATTGACGGCTACTTAATATGTGCAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGTAAGAAGAATGATTTGAAGCTTCACTAGATGCAGTTTTGCTCAAGAAGTTTCATATATGATTCCATTGGAAACAACGCCTTTACTTTTGAGATATACTTGCTAAATCTCTAGCTCTCATTGCCTGAATAATACCACCTTTTGACGATTACGCAAAGGAAATATTTACTATAACATTTAACTTTCTTTGTACGGTTTCAAATAAGATTATACTCAATGATTCTCATTTTCTTGGAATATTAGAATAACAGGGTTGCATTAGTTTCTTATGGTCGAGGTTTGCATTTTGCAGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGA

mRNA sequence

ATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGA

Coding sequence (CDS)

ATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGA

Protein sequence

MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKKT

Homology

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BLAST of Cla011582 vs. Swiss-Prot
Match: VAP12_ARATH (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12 PE=1 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 8.5e-88
Identity = 160/240 (66.67%), Postives = 197/240 (82.08%), Query Frame = 1


Query: 3   TGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVSPR 62
           + ELL+I+P++L+FPFELKKQISCSL L NKT++YVAFKVKTTNPKKYCVRPNTG+V PR
Sbjct: 2   SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61

Query: 63  STCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLK 122
           S+ +V+VTMQAQKEAPAD+QCKDKFLLQ V    GAT KD+  EMF+KEAGH VEE KL+
Sbjct: 62  SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121

Query: 123 VVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARA 182
           VVYV+PP+PPSPV EGSEEGSSPR SVS+NG  N +D   A R   +R + QD S+EARA
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNG--NASDFTAAPRFSADRVDAQDNSSEARA 181

Query: 183 LIAKLTEEKNNAIQQNNKLRQELELLKHDG-RKNAGGVSFLFVILVGLIGIFFGYIIKKT 242
           L+ KLTEEKN+A+Q NN+L+QEL+ L+ +  R  +GG+ F++V+LVGLIG+  GYI+K+T
Sbjct: 182 LVTKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

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BLAST of Cla011582 vs. Swiss-Prot
Match: VAP11_ARATH (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11 PE=1 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.5e-84
Identity = 157/243 (64.61%), Postives = 199/243 (81.89%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MS  ELL++EPL+L+FPFELKKQISCSL L+NKT++ VAFKVKTTNPKKYCVRPNTG+V 
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTC+V+VTMQAQKEAP+DMQCKDKFLLQ V    G TAK++  EMF+KEAGH VEE K
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVE-RSEPQDKSAE 180
           L+V YV+PP+PPSPV EGSEEGSSPR SVS+NG+ ++       R  V+ ++  Q+ ++E
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFE---RFIVDNKAGHQENTSE 196

Query: 181 ARALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKN-AGGVSFLFVILVGLIGIFFGYII 240
           ARALI KLTEEK +AIQ NN+L++EL+ L+ + +K+ +GG+ F++V+LVGLIG+  GYI+
Sbjct: 197 ARALITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIM 256

Query: 241 KKT 242
           K+T
Sbjct: 257 KRT 256

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BLAST of Cla011582 vs. Swiss-Prot
Match: VAP13_ARATH (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-74
Identity = 144/242 (59.50%), Postives = 187/242 (77.27%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESY-VAFKVKTTNPKKYCVRPNTGIV 60
           M+TG+L++I P ELKFPFELKKQ SCS+QL+NKT +  VAFKVKTTNP+KYCVRPNTG+V
Sbjct: 1   MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60

Query: 61  SPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEF 120
            P  +C+V VTMQAQKEAP DMQCKDKFL+Q+V   DG T+K++ AEMFNKEAG V+E+F
Sbjct: 61  LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120

Query: 121 KLKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAE 180
           KL+VVY+ P  PPSPVPEGSEEG+SP  S+++  + + +  +  +R + E SE   KS+E
Sbjct: 121 KLRVVYI-PANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSE---KSSE 180

Query: 181 ARALIAKLTEEKNNAIQQNNKLRQELELL-KHDGRKNAGGVSFLFVILVGLIGIFFGYII 240
           A ++I+KLTEEK +A QQ+ KLR ELE+L K   +K +GG S L ++LVGL+G   GY++
Sbjct: 181 AWSMISKLTEEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLL 238

[Close]

BLAST of Cla011582 vs. Swiss-Prot
Match: VAP14_ARATH (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.6e-55
Identity = 102/154 (66.23%), Postives = 125/154 (81.17%), Query Frame = 1


Query: 5   ELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVSPRST 64
           ELL I+P++++FP EL K++SCSL L+NKTE+YVAFK KTTN KKY VRPN G+V PRS+
Sbjct: 175 ELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSS 234

Query: 65  CDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVV 124
           C+V+V MQA KEAPADMQC+DK L Q        TAKD+ +EMF+KEAGH  EE +LKV+
Sbjct: 235 CEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVM 294

Query: 125 YVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDA 159
           YV+PPQPPSPV EG+EEGSSPR SVS+NGN ++A
Sbjct: 295 YVTPPQPPSPVQEGTEEGSSPRASVSDNGNASEA 328

HSP 2 Score: 196.1 bits (497), Expect = 4.6e-49
Identity = 92/157 (58.60%), Postives = 118/157 (75.16%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MST ELL+ + ++++FP EL KQ SCSL L+NKT++YVAFK +TT PK YCV+P+ G+V 
Sbjct: 1   MSTDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVL 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRS+C+V+V MQA KEAPAD QCKDK L Q      G   K++ +EMF+KEAGH VEE  
Sbjct: 61  PRSSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETI 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFND 158
            K++YV+PPQP SPV EG E+GSSP  SVS+ GN ++
Sbjct: 121 FKIIYVAPPQPQSPVQEGLEDGSSPSASVSDKGNASE 157

[Close]

BLAST of Cla011582 vs. Swiss-Prot
Match: VAP21_ARATH (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.4e-43
Identity = 100/239 (41.84%), Postives = 140/239 (58.58%), Query Frame = 1


Query: 5   ELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVSPRST 64
           +L+SI+P ELKF FEL+KQ  C L+++NKTE+YVAFKVKTT+PKKY VRPNTG++ P  +
Sbjct: 8   QLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDS 67

Query: 65  CDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVV 124
           C + VT+QAQ+E P DMQCKDKFLLQS          ++  + F K++G  + E KLKV 
Sbjct: 68  CIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVS 127

Query: 125 YVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALI 184
           Y++    PS     SE G                    AT G         +S+E  + I
Sbjct: 128 YIT----PSTTQRSSESG--------------------ATNG-------DGQSSETISTI 187

Query: 185 AKLTEEKNNAIQQNNKLRQELELL--KHDGRKNAGGVSFLFVILVGLIGIFFGYIIKKT 242
            +L EE++ A++Q  +L+ ELE +  + + R +  G+S     +VGLIG+  G+I+K T
Sbjct: 188 QRLKEERDAAVKQTQQLQHELETVRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLT 215

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BLAST of Cla011582 vs. TrEMBL
Match: A0A0A0KMX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161980 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 7.9e-125
Identity = 229/240 (95.42%), Postives = 232/240 (96.67%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGELLSIEPLELKFPFELKKQISCSLQLSNKT+SYVAFKVKTTNPKKYCVRPNTGIVS
Sbjct: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVS 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCDVIVTMQAQKEAP+DMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK
Sbjct: 61  PRSTCDVIVTMQAQKEAPSDMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA
Sbjct: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           RALIAKLTEEKNNA+QQ NKLRQELELLKHD RKNA GVSFLFVI VGLIGI  GY  KK
Sbjct: 181 RALIAKLTEEKNNAMQQYNKLRQELELLKHDSRKNASGVSFLFVIFVGLIGIVLGYAFKK 240

[Close]

BLAST of Cla011582 vs. TrEMBL
Match: I1K0P5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G058700 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 3.8e-111
Identity = 201/241 (83.40%), Postives = 221/241 (91.70%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGELL+IEPLELKFPFELKKQISCSLQLSNKT+SYVAFKVKTTNPKKYCVRPNTGIV+
Sbjct: 1   MSTGELLNIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVT 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDG + KDI A+MFNKEAGHVVEE K
Sbjct: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGTSPKDITADMFNKEAGHVVEECK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           L+V+YVSPPQPPSPVPEGSEEGSSPRGSVSENGN N +D   A RG+ ER E QDKSAEA
Sbjct: 121 LRVLYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFTQAARGFTERPESQDKSAEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           RALI++LTEEKNNAIQQN+KL QELELLK +G K+ GGVSF+ V+L+GL+GI  GY++KK
Sbjct: 181 RALISRLTEEKNNAIQQNSKLHQELELLKREGNKSRGGVSFVIVVLIGLLGIIMGYLMKK 240

Query: 241 T 242
           T
Sbjct: 241 T 241

[Close]

BLAST of Cla011582 vs. TrEMBL
Match: V4T0A9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021939mg PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.5e-111
Identity = 200/241 (82.99%), Postives = 220/241 (91.29%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGELLSIEPLELKFPFELKKQISCSLQLSNKT++YVAFKVKTTNPKKYCVRPNTGIV 
Sbjct: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCD+IVTMQAQKEAP DMQCKDKFLLQSVKT DG TAKDINAEMFNKEAGHVVEE K
Sbjct: 61  PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           L+V+YVSPPQPPSPVPEGSEEGSSPRGSVS+NG+ N A+   A R + ER E QDKS EA
Sbjct: 121 LRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           RALI+KLT+EKNNA+QQNNKLRQ+LELL+ +G KN GGVSF+FVILVGL+GI  GY++KK
Sbjct: 181 RALISKLTDEKNNAVQQNNKLRQDLELLRREGNKNRGGVSFIFVILVGLVGIVLGYVMKK 240

Query: 241 T 242
           +
Sbjct: 241 S 241

[Close]

BLAST of Cla011582 vs. TrEMBL
Match: B9GYA5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s07370g PE=4 SV=2)

HSP 1 Score: 408.3 bits (1048), Expect = 6.5e-111
Identity = 202/241 (83.82%), Postives = 218/241 (90.46%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGELL IEPLELKFPFELKKQISCSLQLSNKT++YVAFKVKTTNPKKYCVRPN GIV 
Sbjct: 1   MSTGELLGIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNAGIVL 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCDV VTMQAQKEAP DMQCKDKFLLQSVKT DG TAKDINAEMF+KEAGH VEE K
Sbjct: 61  PRSTCDVTVTMQAQKEAPTDMQCKDKFLLQSVKTNDGVTAKDINAEMFSKEAGHHVEECK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           L+V+YVSPPQPPSPV EGSEEGSSPRGSVS+NGN    DL+TATR +VER EPQ+KS EA
Sbjct: 121 LRVLYVSPPQPPSPVQEGSEEGSSPRGSVSDNGNVTGTDLSTATRAFVERLEPQEKSLEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           RALI+KLT+EKNNAIQQNNKLRQELELL+H G KN GGVS +FVI VGL+GIF GY++KK
Sbjct: 181 RALISKLTDEKNNAIQQNNKLRQELELLRHQGNKNRGGVSIMFVIFVGLLGIFLGYLVKK 240

Query: 241 T 242
           T
Sbjct: 241 T 241

[Close]

BLAST of Cla011582 vs. TrEMBL
Match: A0A067KY14_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03394 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.9e-110
Identity = 199/241 (82.57%), Postives = 222/241 (92.12%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGE+LSIEPLELKFPFELKKQISCSLQLSNKT++YVAFKVKTTNPKKYCVRPN GIVS
Sbjct: 1   MSTGEILSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNAGIVS 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCDVIVTMQAQKEAP DMQCKDKFLLQSV+TVDGATAKDINAEMFNKEAGHVVEE K
Sbjct: 61  PRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVRTVDGATAKDINAEMFNKEAGHVVEECK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           LKV+YVSPPQPPSPVPEGSEEGSSPRGSVS+NGN N  + + AT+ + ER EPQ+KS+EA
Sbjct: 121 LKVLYVSPPQPPSPVPEGSEEGSSPRGSVSDNGNTNGNEFSNATKAFSERFEPQEKSSEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           +ALI+KLTEEKNNA+QQN +LRQELELLK +G KN  GVSF+FV+ VGL+GI  GY++KK
Sbjct: 181 KALISKLTEEKNNAMQQNTRLRQELELLKREGNKNRAGVSFMFVMFVGLLGIILGYLMKK 240

Query: 241 T 242
           +
Sbjct: 241 S 241

[Close]

BLAST of Cla011582 vs. NCBI nr
Match: gi|659073499|ref|XP_008437092.1| (PREDICTED: vesicle-associated protein 1-2 [Cucumis melo])

HSP 1 Score: 460.3 bits (1183), Expect = 2.1e-126
Identity = 231/241 (95.85%), Postives = 236/241 (97.93%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGELLSIEPLELKFPFELKKQISCSLQLSNKT+SYVAFKVKTTNPKKYCVRPNTGIVS
Sbjct: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVS 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK
Sbjct: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA
Sbjct: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           RALIAKLTEEKNNA+QQ NKLRQELELLKHD RKNA GVSF++VILVGLIG+  GYIIKK
Sbjct: 181 RALIAKLTEEKNNAMQQYNKLRQELELLKHDSRKNASGVSFVYVILVGLIGVILGYIIKK 240

Query: 241 T 242
           T
Sbjct: 241 T 241

[Close]

BLAST of Cla011582 vs. NCBI nr
Match: gi|449469394|ref|XP_004152405.1| (PREDICTED: vesicle-associated protein 1-2 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-124
Identity = 229/240 (95.42%), Postives = 232/240 (96.67%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGELLSIEPLELKFPFELKKQISCSLQLSNKT+SYVAFKVKTTNPKKYCVRPNTGIVS
Sbjct: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVS 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCDVIVTMQAQKEAP+DMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK
Sbjct: 61  PRSTCDVIVTMQAQKEAPSDMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA
Sbjct: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           RALIAKLTEEKNNA+QQ NKLRQELELLKHD RKNA GVSFLFVI VGLIGI  GY  KK
Sbjct: 181 RALIAKLTEEKNNAMQQYNKLRQELELLKHDSRKNASGVSFLFVIFVGLIGIVLGYAFKK 240

[Close]

BLAST of Cla011582 vs. NCBI nr
Match: gi|571453145|ref|XP_006579387.1| (PREDICTED: uncharacterized protein LOC100527687 isoform X3 [Glycine max])

HSP 1 Score: 409.1 bits (1050), Expect = 5.5e-111
Identity = 201/241 (83.40%), Postives = 221/241 (91.70%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGELL+IEPLELKFPFELKKQISCSLQLSNKT+SYVAFKVKTTNPKKYCVRPNTGIV+
Sbjct: 1   MSTGELLNIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVT 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDG + KDI A+MFNKEAGHVVEE K
Sbjct: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGTSPKDITADMFNKEAGHVVEECK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           L+V+YVSPPQPPSPVPEGSEEGSSPRGSVSENGN N +D   A RG+ ER E QDKSAEA
Sbjct: 121 LRVLYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFTQAARGFTERPESQDKSAEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           RALI++LTEEKNNAIQQN+KL QELELLK +G K+ GGVSF+ V+L+GL+GI  GY++KK
Sbjct: 181 RALISRLTEEKNNAIQQNSKLHQELELLKREGNKSRGGVSFVIVVLIGLLGIIMGYLMKK 240

Query: 241 T 242
           T
Sbjct: 241 T 241

[Close]

BLAST of Cla011582 vs. NCBI nr
Match: gi|566161362|ref|XP_002304271.2| (hypothetical protein POPTR_0003s07370g [Populus trichocarpa])

HSP 1 Score: 408.3 bits (1048), Expect = 9.3e-111
Identity = 202/241 (83.82%), Postives = 218/241 (90.46%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGELL IEPLELKFPFELKKQISCSLQLSNKT++YVAFKVKTTNPKKYCVRPN GIV 
Sbjct: 1   MSTGELLGIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNAGIVL 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCDV VTMQAQKEAP DMQCKDKFLLQSVKT DG TAKDINAEMF+KEAGH VEE K
Sbjct: 61  PRSTCDVTVTMQAQKEAPTDMQCKDKFLLQSVKTNDGVTAKDINAEMFSKEAGHHVEECK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           L+V+YVSPPQPPSPV EGSEEGSSPRGSVS+NGN    DL+TATR +VER EPQ+KS EA
Sbjct: 121 LRVLYVSPPQPPSPVQEGSEEGSSPRGSVSDNGNVTGTDLSTATRAFVERLEPQEKSLEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           RALI+KLT+EKNNAIQQNNKLRQELELL+H G KN GGVS +FVI VGL+GIF GY++KK
Sbjct: 181 RALISKLTDEKNNAIQQNNKLRQELELLRHQGNKNRGGVSIMFVIFVGLLGIFLGYLVKK 240

Query: 241 T 242
           T
Sbjct: 241 T 241

[Close]

BLAST of Cla011582 vs. NCBI nr
Match: gi|567895680|ref|XP_006440328.1| (hypothetical protein CICLE_v10021939mg [Citrus clementina])

HSP 1 Score: 408.3 bits (1048), Expect = 9.3e-111
Identity = 200/241 (82.99%), Postives = 220/241 (91.29%), Query Frame = 1


Query: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVS 60
           MSTGELLSIEPLELKFPFELKKQISCSLQLSNKT++YVAFKVKTTNPKKYCVRPNTGIV 
Sbjct: 1   MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60

Query: 61  PRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFK 120
           PRSTCD+IVTMQAQKEAP DMQCKDKFLLQSVKT DG TAKDINAEMFNKEAGHVVEE K
Sbjct: 61  PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECK 120

Query: 121 LKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEA 180
           L+V+YVSPPQPPSPVPEGSEEGSSPRGSVS+NG+ N A+   A R + ER E QDKS EA
Sbjct: 121 LRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEA 180

Query: 181 RALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKK 240
           RALI+KLT+EKNNA+QQNNKLRQ+LELL+ +G KN GGVSF+FVILVGL+GI  GY++KK
Sbjct: 181 RALISKLTDEKNNAVQQNNKLRQDLELLRREGNKNRGGVSFIFVILVGLVGIVLGYVMKK 240

Query: 241 T 242
           +
Sbjct: 241 S 241

The following BLAST results are available for this feature:

BLAST of Cla011582 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VAP12_ARATH	8.5e-88	66.67	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12 PE=1 SV=1	[more]
VAP11_ARATH	1.5e-84	64.61	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11 PE=1 SV=1	[more]
VAP13_ARATH	1.4e-74	59.50	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13 PE=2 SV=1	[more]
VAP14_ARATH	5.6e-55	66.23	Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14 PE=2 SV=1	[more]
VAP21_ARATH	6.4e-43	41.84	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=1 SV=1	[more]

BLAST of Cla011582 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMX3_CUCSA	7.9e-125	95.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161980 PE=4 SV=1	[more]
I1K0P5_SOYBN	3.8e-111	83.40	Uncharacterized protein OS=Glycine max GN=GLYMA_05G058700 PE=4 SV=1	[more]
V4T0A9_9ROSI	6.5e-111	82.99	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021939mg PE=4 SV=1	[more]
B9GYA5_POPTR	6.5e-111	83.82	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s07370g PE=4 SV=2	[more]
A0A067KY14_JATCU	1.9e-110	82.57	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03394 PE=4 SV=1	[more]

BLAST of Cla011582 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073499\|ref\|XP_008437092.1\|	2.1e-126	95.85	PREDICTED: vesicle-associated protein 1-2 [Cucumis melo]	[more]
gi\|449469394\|ref\|XP_004152405.1\|	1.1e-124	95.42	PREDICTED: vesicle-associated protein 1-2 [Cucumis sativus]	[more]
gi\|571453145\|ref\|XP_006579387.1\|	5.5e-111	83.40	PREDICTED: uncharacterized protein LOC100527687 isoform X3 [Glycine max]	[more]
gi\|566161362\|ref\|XP_002304271.2\|	9.3e-111	83.82	hypothetical protein POPTR_0003s07370g [Populus trichocarpa]	[more]
gi\|567895680\|ref\|XP_006440328.1\|	9.3e-111	82.99	hypothetical protein CICLE_v10021939mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000535	MSP_dom
IPR008962	PapD-like_sf
IPR016763	VAP

Vocabulary: **Cellular Component**
Term	Definition
GO:0005789	endoplasmic reticulum membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0090158	endoplasmic reticulum membrane organization
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003824	catalytic activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU36181	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla011582	Cla011582.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU36181	WMU36181	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000535	Major sperm protein (MSP) domain	PFAM	PF00635	Motile_Sperm	coord: 7..110 score: 3.4
IPR000535	Major sperm protein (MSP) domain	PROFILE	PS50202	MSP	coord: 6..126 score: 30
IPR008962	PapD-like	GENE3D	G3DSA:2.60.40.360		coord: 3..124 score: 8.1
IPR008962	PapD-like	unknown	SSF49354	PapD-like	coord: 2..141 score: 4.71
IPR016763	Vesicle-associated membrane-protein-associated protein	PIR	PIRSF019693	VAMP_assoc_prot	coord: 1..240 score: 4.1
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 1..240 score: 1.8E
None	No IPR available	unknown	Coil	Coil	coord: 177..211 scor
None	No IPR available	PANTHER	PTHR10809:SF50	VESICLE-ASSOCIATED PROTEIN 1-1-RELATED	coord: 1..240 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla011582	Cla97C01G004180	Watermelon (97103) v2	wmwmbB235
Cla011582	Csa5G161980	Cucumber (Chinese Long) v2	cuwmB408
Cla011582	MELO3C005536	Melon (DHL92) v3.5.1	mewmB029
Cla011582	ClCG01G004010	Watermelon (Charleston Gray)	wcgwmB142
Cla011582	CSPI05G06790	Wild cucumber (PI 183967)	cpiwmB416
Cla011582	Cucsa.301850	Cucumber (Gy14) v1	cgywmB552
Cla011582	CmaCh15G011250	Cucurbita maxima (Rimu)	cmawmB277
Cla011582	CmaCh02G015420	Cucurbita maxima (Rimu)	cmawmB576
Cla011582	CmoCh15G011850	Cucurbita moschata (Rifu)	cmowmB267
Cla011582	CmoCh02G015850	Cucurbita moschata (Rifu)	cmowmB570
Cla011582	Lsi09G004200	Bottle gourd (USVL1VR-Ls)	lsiwmB027
Cla011582	Cp4.1LG13g02380	Cucurbita pepo (Zucchini)	cpewmB183
Cla011582	Cp4.1LG05g02640	Cucurbita pepo (Zucchini)	cpewmB711
Cla011582	CsGy5G004140	Cucumber (Gy14) v2	cgybwmB381
Cla011582	MELO3C005536.2	Melon (DHL92) v3.6.1	medwmB027
Cla011582	Carg23207	Silver-seed gourd	carwmB0541
Cla011582	CsaV3_5G004190	Cucumber (Chinese Long) v3	cucwmB433
Cla011582	Bhi12G000415	Wax gourd	wgowmB077

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla011582	Silver-seed gourd	carwmB0924
Cla011582	Cucumber (Chinese Long) v3	cucwmB273
Cla011582	Watermelon (97103) v2	wmwmbB254
Cla011582	Watermelon (97103) v1	wmwmB049
Cla011582	Cucumber (Gy14) v1	cgywmB588
Cla011582	Cucurbita maxima (Rimu)	cmawmB805
Cla011582	Cucurbita moschata (Rifu)	cmowmB795
Cla011582	Melon (DHL92) v3.5.1	mewmB477
Cla011582	Watermelon (Charleston Gray)	wcgwmB071
Cla011582	Cucumber (Chinese Long) v2	cuwmB263
Cla011582	Cucurbita pepo (Zucchini)	cpewmB846
Cla011582	Bottle gourd (USVL1VR-Ls)	lsiwmB454