ClCG01G004010 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCACGTGTTTTGCTCCTCCCTTCTCTTGTCCGCAGCACGTTCGCCATTGTCGCTCCTCTCTTTTCTCGATCTGTTCGCGAAACTTGCTCTCAAGCAAACTCATTTCCAGATTCTCTTCTCTTCAATCTCTTCAATTTCATCTTCCCTTTTTTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTGTGAGTTCATCTTTTTTTTTTTTCTTTTCTTTTCTGGGAGATTTCCTTCTTGTGGATCTGTTTTCAGGGTTCTTTTTTGTCTTTTGTTTTGATTTCATTTCTGCTTAATTTGTTTTTGTTTTCTTTGTTTCTTTCTCGTTAGTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGTGTGTTTTGTTTCTTTCTGTTTGAATCCTTCTGGGTTTGATTCAATTTGTTTGATTTGCGTAATTGATCTTTTCTACTGTGAAATGCTTTGGTACTCGTAGTATTAAGCTGTTCTGTATTTGGAATGTAGGCGTCTGCACTCTTTTTTCTCATTTCTTTCGCCCTTCTCTCTTGATGTATCTGTCTGGCGTCAGATCATGTTGTGAAATTTGTTAATTTCGTCCATTTTCAATTAGCTTGTATTTGAATACTTTGTTCTATGTGTTTTGTCCACTTAAATTAAATTGATCCTTTTCTAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGGTGCCAAATGCCAATATCACTTATTGTCATTCGTAGTTTTAAATTTTCAAATTAGTTTTTTGGTTACTGATATAGAGAGTACTTTGTTGTCTAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGGTATATTTAGTGTGAATGTTTAAAGCTTCTGGTTAGTATTAGCATTCTACTTTTATTTATGGGCGTGGGGTTTGCAGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGTGAGTAGTTGGGTTCTCTTTTTTTCCTATTCGTTCTTCTGCACAGTTGATTGACACACCTTCACCTTCTGTTTGTAGGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGTAAAATAATAGGAAGATTGTTGGTTTTCTATAGGTGTAAAGTTTTATGTCTGCAGATAATATAGATGATTCTCTCTTTTCTTTTTGGTAATTCTGATGCCTGATTTATGTGCTCTCTCTTTTCTATTCGGTAATTCTGATGCCTGATTTATGTGCATAGCTTGTGATGTAATTAAAATTTTCTCCTCCAAATTTCCATTTCTCTTATTATTATTATTATTATTTTTTATTAGATAGAACTCAATGCTAATGTGTGACCTTGTGATTGAAGTGTCACTCTGAGCAGTGAACAATAAAATTTTCTCGGGGCAGTATTCTATAGTAGTTAACTGTACACTTGTGAAGTTTTGGGTGAACTTGTTACATGATAGAAGTATTTGTTTTGTAAAGACTGCTCAAAATGGTTAGCTATACTTTAAGCATATTTTGTTGCATTCTAATCTTAAATGAAATCATTATGTTTCATTGTAGTTCTTAGTGTTAACATACAGGTGGATGCAACTTCCTTGGCATAATATTTGTAATACTTGAAGATTTACTTTTGAAATTTTGTTTAAACATGCTGAGTGCTTATTTTGTATGGATTTCTTATAATGGTTCGGTCATGTATATGATCTTTGATCATATTTCCTAACTTTAACGGAACCAGTATTACATGATAACAGTATTTTCATCACAAAACAATAAATTTAACATGATACTGCTATTGTTAATCTATGCATGGATACTGTTGGCATAATCTCGTCCCCAAGTATTGCAATATTGGGATAGAACTACCAAGAATTGCCTAGCAGGAAGAGGTAAAAGTGGATATTTTTGATGTCATAAGTTCAAGCCAGGATTATTTTTCCTTTTCTCCAGTGCCAAATAAAGAGTTAGGATAGGATACATCCACTTGGAGAGAACCTTCCTGAACTGTTGACTTGAACGATCCTTTACCTATGAAAGAATGATGCTATATTCTTGTTTTGCTGCTGTGTATTAAACTCTTTCCAAAGTTTCCTGGCAACTAATCGATTCTCCAAAGTATGTTTTATGCATTCAGTTCGGTTTGCTTCTTCGTTGAATGTTGTAAAATTCCCCATCTGTTCCTTGGCATGACTATCCAGTTAAATTTTCTAACACAGCTAATCAATCAGTTCTCTTTGCCAAAAGATAACTAAGCTAAGCTCAGGACCACCACACCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCACCCAATAATAGACAGAAACTGCTTCAATCTTTCAAGATATAATTTCTTTTATGTGGTACTTCGTCCCTTTCCTGCAGAACTTTTTGTTGATACCTGAAAGTACTGTAATTCACAAGTCCAGTGACCCATGGATCTCTCGTTCTTGTTTCTTTAAACAAAAATGTTGATTTTCTTCTTTGTTTGTGCAATGTCCTCAAACTTTTATCATGGTTCTCAGATGTTTTTAAATTATTCGGCACTATGAAGATGGTTTGATTGACTAAATCCTGGGCCACTGCAGCTATTTGTGTACGTGTGTGTGCGTTTTCATGTATGCATATACTGTACTTTTTACTTCTAGCAGGATGCTTATTGACGGCTACTTAATATGTGCAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGTAAGAAGAATGATTTGAAGCTTCACTAGATGCAGTTTTGCTCAAGAAGTTTCATATATGATTCCATTGGAAACAACGCCTTTACTTTTGAGATATACTTGCTAAATCTCTAGCTCTCATTGCCTGAATAATACCACCTTTTGACGATTACGCAAAGGAAATATTTACTATAACATTTAACTTTCTTTGTACGGTTTCAAATAAGATTATACTCAATGATTCTCATTTTCTTGGAATATTAGAATAACAGGGTTGCATTAGTTTCTTATGGTCGAGGTTTGCATTTTGCAGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGAGTATCTCTTTGCAGCAATCTGGATTTATATCATTATATTTTCTATGATGAAAGGAAAGGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCAAGTTTTAATTTGTTGAAGTAGCAAAATTGTTAGGTGGTGTTCAAGAATTTGTAGTTGCTGAATTTGCAAGGTAGCACACTCTTTCTGTAACTTAAAAGAGTTTTTTTTTTTTTTTTTTTTTTT GGCACGTGTTTTGCTCCTCCCTTCTCTTGTCCGCAGCACGTTCGCCATTGTCGCTCCTCTCTTTTCTCGATCTGTTCGCGAAACTTGCTCTCAAGCAAACTCATTTCCAGATTCTCTTCTCTTCAATCTCTTCAATTTCATCTTCCCTTTTTTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGAGTATCTCTTTGCAGCAATCTGGATTTATATCATTATATTTTCTATGATGAAAGGAAAGGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCAAGTTTTAATTTGTTGAAGTAGCAAAATTGTTAGGTGGTGTTCAAGAATTTGTAGTTGCTGAATTTGCAAGGTAGCACACTCTTTCTGTAACTTAAAAGAGTTTTTTTTTTTTTTTTTTTTTTT GGCACGTGTTTTGCTCCTCCCTTCTCTTGTCCGCAGCACGTTCGCCATTGTCGCTCCTCTCTTTTCTCGATCTGTTCGCGAAACTTGCTCTCAAGCAAACTCATTTCCAGATTCTCTTCTCTTCAATCTCTTCAATTTCATCTTCCCTTTTTTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGA GTCFAPPFSCPQHVRHCRSSLFSICSRNLLSSKLISRFSSLQSLQFHLPFFDPASLFSTMSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKKT
BLAST of ClCG01G004010 vs. Swiss-Prot
Match: VAP12_ARATH (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12 PE=1 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.1e-87 Identity = 160/240 (66.67%), Postives = 197/240 (82.08%), Query Frame = 1
BLAST of ClCG01G004010 vs. Swiss-Prot
Match: VAP11_ARATH (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11 PE=1 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.9e-84 Identity = 157/243 (64.61%), Postives = 199/243 (81.89%), Query Frame = 1
BLAST of ClCG01G004010 vs. Swiss-Prot
Match: VAP13_ARATH (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13 PE=2 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.8e-74 Identity = 144/242 (59.50%), Postives = 187/242 (77.27%), Query Frame = 1
BLAST of ClCG01G004010 vs. Swiss-Prot
Match: VAP14_ARATH (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14 PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 6.9e-55 Identity = 102/154 (66.23%), Postives = 125/154 (81.17%), Query Frame = 1
HSP 2 Score: 196.1 bits (497), Expect = 5.7e-49 Identity = 92/157 (58.60%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of ClCG01G004010 vs. Swiss-Prot
Match: VAP21_ARATH (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21 PE=1 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 7.9e-43 Identity = 100/239 (41.84%), Postives = 140/239 (58.58%), Query Frame = 1
BLAST of ClCG01G004010 vs. TrEMBL
Match: A0A0A0KMX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G161980 PE=4 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 9.9e-125 Identity = 229/240 (95.42%), Postives = 232/240 (96.67%), Query Frame = 1
BLAST of ClCG01G004010 vs. TrEMBL
Match: I1K0P5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G058700 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 4.8e-111 Identity = 201/241 (83.40%), Postives = 221/241 (91.70%), Query Frame = 1
BLAST of ClCG01G004010 vs. TrEMBL
Match: V4T0A9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021939mg PE=4 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 8.1e-111 Identity = 200/241 (82.99%), Postives = 220/241 (91.29%), Query Frame = 1
BLAST of ClCG01G004010 vs. TrEMBL
Match: B9GYA5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s07370g PE=4 SV=2) HSP 1 Score: 408.3 bits (1048), Expect = 8.1e-111 Identity = 202/241 (83.82%), Postives = 218/241 (90.46%), Query Frame = 1
BLAST of ClCG01G004010 vs. TrEMBL
Match: A0A067KY14_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03394 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 2.4e-110 Identity = 199/241 (82.57%), Postives = 222/241 (92.12%), Query Frame = 1
BLAST of ClCG01G004010 vs. TAIR10
Match: AT2G45140.1 (AT2G45140.1 plant VAP homolog 12) HSP 1 Score: 324.7 bits (831), Expect = 6.0e-89 Identity = 160/240 (66.67%), Postives = 197/240 (82.08%), Query Frame = 1
BLAST of ClCG01G004010 vs. TAIR10
Match: AT3G60600.1 (AT3G60600.1 vesicle associated protein) HSP 1 Score: 313.9 bits (803), Expect = 1.1e-85 Identity = 157/243 (64.61%), Postives = 199/243 (81.89%), Query Frame = 1
BLAST of ClCG01G004010 vs. TAIR10
Match: AT4G00170.1 (AT4G00170.1 Plant VAMP (vesicle-associated membrane protein) family protein) HSP 1 Score: 280.8 bits (717), Expect = 9.9e-76 Identity = 144/242 (59.50%), Postives = 187/242 (77.27%), Query Frame = 1
BLAST of ClCG01G004010 vs. TAIR10
Match: AT1G51270.3 (AT1G51270.3 structural molecules;transmembrane receptors;structural molecules) HSP 1 Score: 215.7 bits (548), Expect = 3.9e-56 Identity = 102/154 (66.23%), Postives = 125/154 (81.17%), Query Frame = 1
HSP 2 Score: 196.1 bits (497), Expect = 3.2e-50 Identity = 92/157 (58.60%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of ClCG01G004010 vs. TAIR10
Match: AT5G47180.1 (AT5G47180.1 Plant VAMP (vesicle-associated membrane protein) family protein) HSP 1 Score: 175.6 bits (444), Expect = 4.5e-44 Identity = 100/239 (41.84%), Postives = 140/239 (58.58%), Query Frame = 1
BLAST of ClCG01G004010 vs. NCBI nr
Match: gi|659073499|ref|XP_008437092.1| (PREDICTED: vesicle-associated protein 1-2 [Cucumis melo]) HSP 1 Score: 460.3 bits (1183), Expect = 2.6e-126 Identity = 231/241 (95.85%), Postives = 236/241 (97.93%), Query Frame = 1
BLAST of ClCG01G004010 vs. NCBI nr
Match: gi|449469394|ref|XP_004152405.1| (PREDICTED: vesicle-associated protein 1-2 [Cucumis sativus]) HSP 1 Score: 454.5 bits (1168), Expect = 1.4e-124 Identity = 229/240 (95.42%), Postives = 232/240 (96.67%), Query Frame = 1
BLAST of ClCG01G004010 vs. NCBI nr
Match: gi|571453145|ref|XP_006579387.1| (PREDICTED: uncharacterized protein LOC100527687 isoform X3 [Glycine max]) HSP 1 Score: 409.1 bits (1050), Expect = 6.8e-111 Identity = 201/241 (83.40%), Postives = 221/241 (91.70%), Query Frame = 1
BLAST of ClCG01G004010 vs. NCBI nr
Match: gi|566161362|ref|XP_002304271.2| (hypothetical protein POPTR_0003s07370g [Populus trichocarpa]) HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-110 Identity = 202/241 (83.82%), Postives = 218/241 (90.46%), Query Frame = 1
BLAST of ClCG01G004010 vs. NCBI nr
Match: gi|567895680|ref|XP_006440328.1| (hypothetical protein CICLE_v10021939mg [Citrus clementina]) HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-110 Identity = 200/241 (82.99%), Postives = 220/241 (91.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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