Cla011055 (gene) Watermelon (97103) v1

NameCla011055
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr1 : 16241472 .. 16242197 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCTCTTTTACGAGAAGAAAACAGTAAAATTGAAGCAACGCGCCAGTTGTACGAAGCTATGCTCCAGAACCAAGCCACTGCACTTCGCAATTTAGAAATTCAAATGAATCAAATTGCAGTGGGGCTCGAAAATGAAAAGCAAGAAGCATTGCTAAGTACAACCGAAGTTCCACTAGGGAACTTAGAAGAACAATGTCGAGGTGAGACATTGTCAAGTGGGAAAATCAATCTCACAGCACATAATGAGGGGACGCAAGGAAACTTGCAATCCTTAAATGCTCCCACAAGTCAACCGATGGAGACTATCACGCATAATGTCCAGCATCCATCATCATCCACCGAATCAGAGGATGAGGAAAATATAGAGCGGAGAGAAAAAGCAACGCAGACAGAACCTGCGTCAGTATATGAAGATACTACTTCTAGACGCGTCCTGGTTGACGTCCAAGAAGAAATCTCAACGCCCCGCGTGGGTGATCAGGTAAAATTTAATGTGATTAACGCATTGAACAATACTGATCATTTTCAATTTTGTCAAATGAACGCAGATATCGATGAAAAGACAAAAACTGTGAATGCGGCGTTCAGAAATGAAATCTTCAAGGACGGTGAAGATGGTGAAGATGATGAAATTAATTTATTCTCCGATCGACAATTAGAGAAATTAGAATGGAGCAACAGATTCGCGGCAAAGATCGAGCCGCTATTAAAAGAGCCTTAA

mRNA sequence

ATGGAATCTCTTTTACGAGAAGAAAACAGTAAAATTGAAGCAACGCGCCAGTTGTACGAAGCTATGCTCCAGAACCAAGCCACTGCACTTCGCAATTTAGAAATTCAAATGAATCAAATTGCAGTGGGGCTCGAAAATGAAAAGCAAGAAGCATTGCTAAGTACAACCGAAGTTCCACTAGGGAACTTAGAAGAACAATGTCGAGGTGAGACATTGTCAAGTGGGAAAATCAATCTCACAGCACATAATGAGGGGACGCAAGGAAACTTGCAATCCTTAAATGCTCCCACAAGTCAACCGATGGAGACTATCACGCATAATGTCCAGCATCCATCATCATCCACCGAATCAGAGGATGAGGAAAATATAGAGCGGAGAGAAAAAGCAACGCAGACAGAACCTGCGTCAGTATATGAAGATACTACTTCTAGACGCGTCCTGGTTGACGTCCAAGAAGAAATCTCAACGCCCCGCGTGGGTGATCAGGTAAAATTTAATGTGATTAACGCATTGAACAATACTGATCATTTTCAATTTTGTCAAATGAACGCAGATATCGATGAAAAGACAAAAACTGTGAATGCGGCGTTCAGAAATGAAATCTTCAAGGACGGTGAAGATGGTGAAGATGATGAAATTAATTTATTCTCCGATCGACAATTAGAGAAATTAGAATGGAGCAACAGATTCGCGGCAAAGATCGAGCCGCTATTAAAAGAGCCTTAA

Coding sequence (CDS)

ATGGAATCTCTTTTACGAGAAGAAAACAGTAAAATTGAAGCAACGCGCCAGTTGTACGAAGCTATGCTCCAGAACCAAGCCACTGCACTTCGCAATTTAGAAATTCAAATGAATCAAATTGCAGTGGGGCTCGAAAATGAAAAGCAAGAAGCATTGCTAAGTACAACCGAAGTTCCACTAGGGAACTTAGAAGAACAATGTCGAGGTGAGACATTGTCAAGTGGGAAAATCAATCTCACAGCACATAATGAGGGGACGCAAGGAAACTTGCAATCCTTAAATGCTCCCACAAGTCAACCGATGGAGACTATCACGCATAATGTCCAGCATCCATCATCATCCACCGAATCAGAGGATGAGGAAAATATAGAGCGGAGAGAAAAAGCAACGCAGACAGAACCTGCGTCAGTATATGAAGATACTACTTCTAGACGCGTCCTGGTTGACGTCCAAGAAGAAATCTCAACGCCCCGCGTGGGTGATCAGGTAAAATTTAATGTGATTAACGCATTGAACAATACTGATCATTTTCAATTTTGTCAAATGAACGCAGATATCGATGAAAAGACAAAAACTGTGAATGCGGCGTTCAGAAATGAAATCTTCAAGGACGGTGAAGATGGTGAAGATGATGAAATTAATTTATTCTCCGATCGACAATTAGAGAAATTAGAATGGAGCAACAGATTCGCGGCAAAGATCGAGCCGCTATTAAAAGAGCCTTAA

Protein sequence

MESLLREENSKIEATRQLYEAMLQNQATALRNLEIQMNQIAVGLENEKQEALLSTTEVPLGNLEEQCRGETLSSGKINLTAHNEGTQGNLQSLNAPTSQPMETITHNVQHPSSSTESEDEENIERREKATQTEPASVYEDTTSRRVLVDVQEEISTPRVGDQVKFNVINALNNTDHFQFCQMNADIDEKTKTVNAAFRNEIFKDGEDGEDDEINLFSDRQLEKLEWSNRFAAKIEPLLKEP
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU59382watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011055Cla011055.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU59382WMU59382transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 5..50
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None