Cla011040 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAAGAAGAATAAGAGATTGCTAAGAGATGTTGATGTTCTGCACAATGAGGCGGAAACACAAAAGGAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAATGAACAAAGTCGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAGGCCACATCATCCCAAAAGATTGTTGCAGAGGTTGAGAATCTACAGAATTCAGCCAAAGAATATAAATCCCAGCTTACTGAGGTAGAACATAGAAACATACTTCTCCAGGAAGTTGTTACAAGTTTTGAACACCAATTGTTGATGTGTCGCAATGCACGAGAGGTGGTGACAGACGACTATGCTCAGCTGAAGAAGGAATATCAGGAAATGTCAGCAGATTTTGCGGTATGGAGAGATGAGTATAGTATGTTGAGACGCGATTACGATAATGTCAGAGGGCAGGTAGAACAAGGAGCCGAGAAATTAAGGCAGATGGCAAAGATGGCAGATTAA ATGAAAAAGAAGAATAAGAGATTGCTAAGAGATGTTGATGTTCTGCACAATGAGGCGGAAACACAAAAGGAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAATGAACAAAGTCGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAGGCCACATCATCCCAAAAGATTGTTGCAGAGGTTGAGAATCTACAGAATTCAGCCAAAGAATATAAATCCCAGCTTACTGAGGTAGAACATAGAAACATACTTCTCCAGGAAGTTGTTACAAGTTTTGAACACCAATTGTTGATGTGTCGCAATGCACGAGAGGTGGTGACAGACGACTATGCTCAGCTGAAGAAGGAATATCAGGAAATGTCAGCAGATTTTGCGGTATGGAGAGATGAGTATAGTATGTTGAGACGCGATTACGATAATGTCAGAGGGCAGGTAGAACAAGGAGCCGAGAAATTAAGGCAGATGGCAAAGATGGCAGATTAA ATGAAAAAGAAGAATAAGAGATTGCTAAGAGATGTTGATGTTCTGCACAATGAGGCGGAAACACAAAAGGAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAATGAACAAAGTCGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAGGCCACATCATCCCAAAAGATTGTTGCAGAGGTTGAGAATCTACAGAATTCAGCCAAAGAATATAAATCCCAGCTTACTGAGGTAGAACATAGAAACATACTTCTCCAGGAAGTTGTTACAAGTTTTGAACACCAATTGTTGATGTGTCGCAATGCACGAGAGGTGGTGACAGACGACTATGCTCAGCTGAAGAAGGAATATCAGGAAATGTCAGCAGATTTTGCGGTATGGAGAGATGAGTATAGTATGTTGAGACGCGATTACGATAATGTCAGAGGGCAGGTAGAACAAGGAGCCGAGAAATTAAGGCAGATGGCAAAGATGGCAGATTAA MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRNAREVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMAD
BLAST of Cla011040 vs. Swiss-Prot
Match: MYO5B_RAT (Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 7.1e-06 Identity = 39/168 (23.21%), Postives = 77/168 (45.83%), Query Frame = 1
BLAST of Cla011040 vs. TrEMBL
Match: A0A0A0LWU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G328390 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.7e-17 Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 1
BLAST of Cla011040 vs. NCBI nr
Match: gi|659128749|ref|XP_008464352.1| (PREDICTED: putative golgin subfamily A member 6-like protein 3, partial [Cucumis melo]) HSP 1 Score: 161.8 bits (408), Expect = 1.0e-36 Identity = 86/160 (53.75%), Postives = 109/160 (68.12%), Query Frame = 1
BLAST of Cla011040 vs. NCBI nr
Match: gi|700210231|gb|KGN65327.1| (hypothetical protein Csa_1G328390 [Cucumis sativus]) HSP 1 Score: 95.9 bits (237), Expect = 6.8e-17 Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 1
BLAST of Cla011040 vs. NCBI nr
Match: gi|659131250|ref|XP_008465588.1| (PREDICTED: polyamine-modulated factor 1-binding protein 1-like [Cucumis melo]) HSP 1 Score: 63.5 bits (153), Expect = 3.7e-07 Identity = 39/160 (24.38%), Postives = 77/160 (48.12%), Query Frame = 1
BLAST of Cla011040 vs. NCBI nr
Match: gi|659134033|ref|XP_008467001.1| (PREDICTED: tropomyosin-1-like, partial [Cucumis melo]) HSP 1 Score: 58.9 bits (141), Expect = 9.2e-06 Identity = 37/153 (24.18%), Postives = 70/153 (45.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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