Cla010958 (gene) Watermelon (97103) v1

Overview
NameCla010958
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGolgi apparatus membrane protein TVP23 (AHRD V1 **-* E9DHE5_COCPS); contains Interpro domain(s) IPR008564 Protein of unknown function DUF846, eukaryotic
LocationChr1 : 18795064 .. 18795729 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCTTTTGCAGCCACCTGTGGAAAATTATGCTAATCCGAAGACTTGTTTCTTTCATGTTCTTTTCAAGGTAAGGTTATGTTAATATGATATGAATAGACTTCATTCTTGAATGATCTCTGGGCTTTCTGGAATTTATGTGATCATCCTTCTTTTTCAGGCTGGAGCATTGGCTTTTTACATTCTTTCCTCTCTCTTTTTCAGTAGTTTTGTTATCATTTTTGTGGTGACCGTTTTTCTTGCTGCTCTCGACTTTTGGGTCGTGAAGAATGTGAGCGGGCGTATATTGGTTGGTTTAAGGTGGTGGAATGAAATAAATGATCTGGGTGAGAGTGTGTGGAAATTTGAAAGCCTTGATCAAGAGGTGAGTGTTTAGTTCTTACATTTTCAGTATTTGCTTCTCATTTATGTTACCAGGAAAACATTTGAATGCTTATTTCTCACTTCTAATGCACATGAATCCTTGGTTATTCTTTAGTCATTGTCTCGGATGAACAAAAAAGATTCCTGGCTGTTCTGGTGGACCTTGTACCTCACGGTAAGCATTATGATCCCAAATATTGTGATAATTTGATTATGTGTTTGCAATAATTTATCAAACAAGCTATATGATTTTGAGAAATAAATTTTATCATATAGATTGAATGAATGTCGGCAGGTATGA

mRNA sequence

ATGCCTCTTTTGCAGCCACCTGTGGAAAATTATGCTAATCCGAAGACTTGTTTCTTTCATGTTCTTTTCAAGGCTGGAGCATTGGCTTTTTACATTCTTTCCTCTCTCTTTTTCAGTAGTTTTGTTATCATTTTTGTGGTGACCGTTTTTCTTGCTGCTCTCGACTTTTGGGTCGTGAAGAATGTGAGCGGGCGTATATTGGTTGGTTTAAGGTGGTGGAATGAAATAAATGATCTGGGTGAGAGTGTGTGGAAATTTGAAAGCCTTGATCAAGAGTCATTGTCTCGGATGAACAAAAAAGATTCCTGGCTGTTCTGGTGGACCTTGTACCTCACGGTATGA

Coding sequence (CDS)

ATGCCTCTTTTGCAGCCACCTGTGGAAAATTATGCTAATCCGAAGACTTGTTTCTTTCATGTTCTTTTCAAGGCTGGAGCATTGGCTTTTTACATTCTTTCCTCTCTCTTTTTCAGTAGTTTTGTTATCATTTTTGTGGTGACCGTTTTTCTTGCTGCTCTCGACTTTTGGGTCGTGAAGAATGTGAGCGGGCGTATATTGGTTGGTTTAAGGTGGTGGAATGAAATAAATGATCTGGGTGAGAGTGTGTGGAAATTTGAAAGCCTTGATCAAGAGTCATTGTCTCGGATGAACAAAAAAGATTCCTGGCTGTTCTGGTGGACCTTGTACCTCACGGTATGA

Protein sequence

MPLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTV
Homology
[Close]
BLAST of Cla010958 vs. Swiss-Prot
Match: TVP23_ARATH (Golgi apparatus membrane protein-like protein ECHIDNA OS=Arabidopsis thaliana GN=ECH PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 6.4e-54
Identity = 98/108 (90.74%), Postives = 101/108 (93.52%), Query Frame = 1 

Query: 4   LQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVS 63
           +Q PVENYANP+TC FHVLFK  ALAFYILS+LFF+SFVIIFVVTV LAALDFWVVKNVS
Sbjct: 7   IQAPVENYANPRTCLFHVLFKGAALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVS 66

Query: 64  GRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYL 112
           GRILVGLRWWNEINDLGESVWKFESLDQESL+RMNKKDSWLFWWTLYL
Sbjct: 67  GRILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYL 114

[Close]
BLAST of Cla010958 vs. Swiss-Prot
Match: TVP23_DROME (Uncharacterized Golgi apparatus membrane protein-like protein CG5021 OS=Drosophila melanogaster GN=CG5021 PE=2 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 1 

Query: 9   ENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILV 68
           + Y +P   FFH+ F+  A+  Y+    F  SF+  FV  V   + DFW VKN+SGR+LV
Sbjct: 33  QKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLV 92

Query: 69  GLRWWNEINDLGESVWKFESLDQESL-SRMNKKDSWLFWWTLYL 112
           GLRWWN ++D G S W FES + ES  SR+NK +  +FW  L L
Sbjct: 93  GLRWWNYVDDDGVSHWVFESKNSESYQSRVNKNEQRIFWLGLIL 136

[Close]
BLAST of Cla010958 vs. Swiss-Prot
Match: TVP23_YARLI (Golgi apparatus membrane protein TVP23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TVP23 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.4e-21
Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 1 

Query: 12  ANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLR 71
           ++P    F + F+ GAL  Y+   LF   FV++FV+ V L A DFW VKN++GR++VGLR
Sbjct: 11  SHPVALVFFLAFRLGALFTYMFGLLFTDKFVLMFVLVVLLLAADFWNVKNIAGRLMVGLR 70

Query: 72  WWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLY 111
           WWNE ++ GESVW FE+ D +    +N  DS +FW  LY
Sbjct: 71  WWNEASETGESVWVFETADPQRY--INPIDSKVFWMMLY 107

[Close]
BLAST of Cla010958 vs. Swiss-Prot
Match: TVP23_SCHPO (Golgi apparatus membrane protein tvp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tvp23 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-20
Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 1 

Query: 12  ANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLR 71
           ++P   FF +LF+ GA+  YIL   F SSF+++F+V   L A+D W VKNVSGR+LVGLR
Sbjct: 46  SHPVALFFFLLFRTGAIVAYILGMFFTSSFMLLFIVIFTLLAVDLWTVKNVSGRLLVGLR 105

Query: 72  WWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYL 112
           W NE    GES+W FES D       N  D   FW+ LYL
Sbjct: 106 WRNETGVDGESIWIFESADPS--RPRNAVDQKTFWYALYL 143

[Close]
BLAST of Cla010958 vs. Swiss-Prot
Match: TV23A_DICDI (Uncharacterized Golgi apparatus membrane protein-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0276319 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-19
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 1 

Query: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSG 64
           QP      +P + FFH+ FK  A+A +ILSS     FV+ F++    +A DFWV KNV+G
Sbjct: 25  QPQSNAPKHPISVFFHLFFKIVAVAIFILSSFVNIGFVLTFIIVTLSSAFDFWVTKNVTG 84

Query: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFW 107
           R LVGLRWWN+I + G + W FES+  +  S++N  +S +FW
Sbjct: 85  RKLVGLRWWNQIKEDGTNNWVFESVQDK--SQVNPAESLMFW 124

[Close]
BLAST of Cla010958 vs. TrEMBL
Match: A0A0A0L2G2_CUCSA (Golgi apparatus membrane protein TVP23 OS=Cucumis sativus GN=Csa_4G499830 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 9.6e-57
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1 

Query: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSG 64
           QPPVENYANPKTCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVKNVSG
Sbjct: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 64

Query: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 113
           RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 112

[Close]
BLAST of Cla010958 vs. TrEMBL
Match: A9PJZ6_9ROSI (Golgi apparatus membrane protein TVP23 OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-55
Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 1 

Query: 1   MPLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVK 60
           M  +QPPVENYANPKTCFFHVLFKAGALAFYILS+LFF+SFVIIFVVTV LAALDFWVVK
Sbjct: 1   MDPIQPPVENYANPKTCFFHVLFKAGALAFYILSTLFFNSFVIIFVVTVLLAALDFWVVK 60

Query: 61  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYL 112
           NVSGRILVGLRWWNEINDLGESVWKFESLDQESL+RMNKKDSWLFWWTLYL
Sbjct: 61  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYL 111

[Close]
BLAST of Cla010958 vs. TrEMBL
Match: B9I6P4_POPTR (Golgi apparatus membrane protein TVP23 OS=Populus trichocarpa GN=POPTR_0013s00770g PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.1e-55
Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 1 

Query: 1   MPLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVK 60
           M  +QPPVENYANPKTCFFHVLFKAGALAFYILS+LFF+SFVIIFVVTV LAALDFWVVK
Sbjct: 1   MDPIQPPVENYANPKTCFFHVLFKAGALAFYILSTLFFNSFVIIFVVTVLLAALDFWVVK 60

Query: 61  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYL 112
           NVSGRILVGLRWWNEINDLGESVWKFESLDQESL+RMNKKDSWLFWWTLYL
Sbjct: 61  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYL 111

[Close]
BLAST of Cla010958 vs. TrEMBL
Match: B9N466_POPTR (Golgi apparatus membrane protein TVP23 OS=Populus trichocarpa GN=POPTR_0005s01380g PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.6e-54
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 1 

Query: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSG 64
           QPP ENYANPKTCFFHVLFKAGALAFYILS+LFF+SFVIIFVVTV LAALDFWVVKNVSG
Sbjct: 5   QPPGENYANPKTCFFHVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSG 64

Query: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 113
           RILVGLRWWNEINDLGESVWKFESLDQESL+RMNKKDSWLFWWTLY+T
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYIT 112

[Close]
BLAST of Cla010958 vs. TrEMBL
Match: W9R2Q7_9ROSA (Golgi apparatus membrane protein TVP23 OS=Morus notabilis GN=L484_018890 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.2e-53
Identity = 103/112 (91.96%), Postives = 105/112 (93.75%), Query Frame = 1 

Query: 1   MPLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVK 60
           M L QP  ENYANPKTCFFHVLFKAGALAFYILS+LFF SFVIIFVVTV LAALDFWVVK
Sbjct: 1   MDLNQPVGENYANPKTCFFHVLFKAGALAFYILSALFFDSFVIIFVVTVLLAALDFWVVK 60

Query: 61  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 113
           NVSGRILVGLRWWNEINDLGESVWKFE LDQESL+RMNKKDSWLFWWTLYLT
Sbjct: 61  NVSGRILVGLRWWNEINDLGESVWKFECLDQESLARMNKKDSWLFWWTLYLT 112

[Close]
BLAST of Cla010958 vs. NCBI nr
Match: gi|659082975|ref|XP_008442124.1| (PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA isoform X1 [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 1.9e-58
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MPLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVK 60
           +PLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVK
Sbjct: 2   IPLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVK 61

Query: 61  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 113
           NVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT
Sbjct: 62  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 113

[Close]
BLAST of Cla010958 vs. NCBI nr
Match: gi|449466803|ref|XP_004151115.1| (PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 1.4e-56
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1 

Query: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSG 64
           QPPVENYANPKTCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVKNVSG
Sbjct: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 64

Query: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 113
           RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 112

[Close]
BLAST of Cla010958 vs. NCBI nr
Match: gi|224122876|ref|XP_002318938.1| (FAM18-like family protein [Populus trichocarpa])

HSP 1 Score: 221.9 bits (564), Expect = 5.8e-55
Identity = 104/111 (93.69%), Postives = 108/111 (97.30%), Query Frame = 1 

Query: 1   MPLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVK 60
           M  +QPPVENYANPKTCFFHVLFKAGALAFYILS+LFF+SFVIIFVVTV LAALDFWVVK
Sbjct: 1   MDPIQPPVENYANPKTCFFHVLFKAGALAFYILSTLFFNSFVIIFVVTVLLAALDFWVVK 60

Query: 61  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYL 112
           NVSGRILVGLRWWNEINDLGESVWKFESLDQESL+RMNKKDSWLFWWTLYL
Sbjct: 61  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYL 111

[Close]
BLAST of Cla010958 vs. NCBI nr
Match: gi|566168759|ref|XP_006382357.1| (hypothetical protein POPTR_0005s01380g [Populus trichocarpa])

HSP 1 Score: 219.2 bits (557), Expect = 3.8e-54
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 1 

Query: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSG 64
           QPP ENYANPKTCFFHVLFKAGALAFYILS+LFF+SFVIIFVVTV LAALDFWVVKNVSG
Sbjct: 5   QPPGENYANPKTCFFHVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSG 64

Query: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 113
           RILVGLRWWNEINDLGESVWKFESLDQESL+RMNKKDSWLFWWTLY+T
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYIT 112

[Close]
BLAST of Cla010958 vs. NCBI nr
Match: gi|743890144|ref|XP_011038956.1| (PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA [Populus euphratica])

HSP 1 Score: 216.5 bits (550), Expect = 2.4e-53
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 1 

Query: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSG 64
           QPP ENYANPKTCFFHVLFKAGALAFYILS+LFF+SFVIIFVVTV LAALDFWVVKNVSG
Sbjct: 5   QPPGENYANPKTCFFHVLFKAGALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVSG 64

Query: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLT 113
           RILVGLRWWNEINDLGESVWKFESLDQESL+RMNKK SWLFWWTLY+T
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLARMNKKGSWLFWWTLYIT 112

The following BLAST results are available for this feature:
BLAST of Cla010958 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TVP23_ARATH6.4e-5490.74Golgi apparatus membrane protein-like protein ECHIDNA OS=Arabidopsis thaliana GN... [more]
TVP23_DROME1.1e-2146.15Uncharacterized Golgi apparatus membrane protein-like protein CG5021 OS=Drosophi... [more]
TVP23_YARLI9.4e-2147.47Golgi apparatus membrane protein TVP23 OS=Yarrowia lipolytica (strain CLIB 122 /... [more]
TVP23_SCHPO1.6e-2050.00Golgi apparatus membrane protein tvp23 OS=Schizosaccharomyces pombe (strain 972 ... [more]
TV23A_DICDI1.8e-1945.10Uncharacterized Golgi apparatus membrane protein-like protein 1 OS=Dictyostelium... [more]
BLAST of Cla010958 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2G2_CUCSA9.6e-5799.07Golgi apparatus membrane protein TVP23 OS=Cucumis sativus GN=Csa_4G499830 PE=3 S... [more]
A9PJZ6_9ROSI4.1e-5593.69Golgi apparatus membrane protein TVP23 OS=Populus trichocarpa x Populus deltoide... [more]
B9I6P4_POPTR4.1e-5593.69Golgi apparatus membrane protein TVP23 OS=Populus trichocarpa GN=POPTR_0013s0077... [more]
B9N466_POPTR2.6e-5494.44Golgi apparatus membrane protein TVP23 OS=Populus trichocarpa GN=POPTR_0005s0138... [more]
W9R2Q7_9ROSA2.2e-5391.96Golgi apparatus membrane protein TVP23 OS=Morus notabilis GN=L484_018890 PE=3 SV... [more]
BLAST of Cla010958 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082975|ref|XP_008442124.1|1.9e-5898.21PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA isoform X1 [Cuc... [more]
gi|449466803|ref|XP_004151115.1|1.4e-5699.07PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA [Cucumis sativu... [more]
gi|224122876|ref|XP_002318938.1|5.8e-5593.69FAM18-like family protein [Populus trichocarpa][more]
gi|566168759|ref|XP_006382357.1|3.8e-5494.44hypothetical protein POPTR_0005s01380g [Populus trichocarpa][more]
gi|743890144|ref|XP_011038956.1|2.4e-5393.52PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA [Populus euphra... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008564TVP23-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007030 Golgi organization
biological_process GO:0009306 protein secretion
biological_process GO:0009826 unidimensional cell growth
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0008150 biological_process
cellular_component GO:0005768 endosome
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0030173 integral component of Golgi membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU61578watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla010958Cla010958.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU61578WMU61578transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008564Protein of unknown function DUF846, eukaryoticPANTHERPTHR13019UNCHARACTERIZEDcoord: 9..112
score: 2.5
IPR008564Protein of unknown function DUF846, eukaryoticPFAMPF05832DUF846coord: 13..112
score: 3.5
NoneNo IPR availablePANTHERPTHR13019:SF14SUBFAMILY NOT NAMEDcoord: 9..112
score: 2.5