Cla010318 (gene) Watermelon (97103) v1

NameCla010318
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- D7M7B4_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr9 : 30249227 .. 30250852 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCGAAAGAGAACAAATGACAGTAGCTTCAACCGCTTTCAACGGTCTAGCTTATGGCAGAAATGCACCGGCCTTCGTGCTTTGAAGCAACTTCATGCCTTTCTGGTCGTCAATGGCCTTAATTCAAGCACATCTGCACTCAGAGAACTCATTTTCGTCAGTGCAATAGCTGTCTCTGGTACAATGGATTATGCCCACCAAGTGTTCGCTCAAATTACTGAACCGGATATCTTCATGTGGAACACCATGATCAGGGGTTCGGCTCAGAGCTTGAAGCCTGTAACTGCTGTTTCTCTTTATGCCCAGATGGAAAATCGTGGGGTTAGGCCTGATAAATTTACCTTCTCGTTCGTGCTCAAGGCCTGCACTAAGCTTTCTTGGGTTAAGTTGGGATTTGGGATTCATGGGAAGGTTCTGAAGTTTGGGTTTCAATCCAATAAATTTGTAAGGAATACTCTTATTTATTTCCATGCTAATTGTGGCGATTTAACCACTGCAAGGGCACTTTTTGACGCTTCTGCCAAAAGGGATGTTGTGCCTTGGTCAGCTTTGACGGCAGGCTATGCAAGAAGAGGGGAATTGGATGTTGCACGACAGTTGTTTGACGAAATGCCAATGAAAGATTTGGTCTCGTGGAATGTGATGATTACAGCATATGCAAAGCGTGGGGAGATGGAGAAGGCAAGGAAACTATTTGATGAAGCTCCGAAGAAAGATGTCGTGACTTGGAATGCGATGATTGCAGGATACGTGCTTTCTGGATCGAACAAGCAAGCCTTGGAGATGTTTAATGCAATGAGAGATATGGGACAAAGGCCGGATGATGTGACAATGTTGAGTATCTTGTCTGCTTCTGCTGATTTGGGTGATTTGGAAATTGGAAAGAAGATACATCGTTCCATTTTCGAAATGTGCTGCGGAGATTTAAGTGTGCTTCTTGGCAATGCAGTTGTAGACATGTACGCCAAGTGTGGAAGCATTGAGAATGCTTTGGAAGTTTTTCAAGGGATGAGCAATAAAGATATCTCCTCATGGAATTCAATAATAGGAGGATTAGCTTTTCATGGACATGCTGAGGAGTCACTAAATCTATTTCAAGAAATGCTCAGGTTGAAAATGAGGCCAAATGAAATCACTTTTGTTGGTGTGTTGGTTGCTTGTAGCCATGCTGGGAAAGTACAAGAAGGGCGCATGTACTTCAGTCTCATGAGAAACATGTACAAAATTGAGCCCAATATCAAGCATTACGGATGTATGGTAGACATATTGGGGCGTGCCGGGCTATTGATTGAAGCATTTGATTTTATAGACACAATGGAGATTGAACCTAATGCCATCATTTGGAGAACACTACTTGGGGCCTGTAGAGTTCATGGAGATGTTGAATTGGGAAGGCGCGCAAATGAGCAATTACTCAAAATGAAGAAGGATGAGAGTGGGGATTATGTACTGCTTTCTAACATATATGCATCACAAGGTGAGTGGGATGGAGTCCAGAAAGTGCGGAAGATGATGGATGATGGTGGGGTGAAAAAGGAGCCAGGTCGTAGCCTGATTGACACAGATTCCTTTCTGATGCATTTCTTGTTTGACTCAAAGCCCAAATTTGTAGAAGGCAGTTGA

mRNA sequence

ATGATCCGAAAGAGAACAAATGACAGTAGCTTCAACCGCTTTCAACGGTCTAGCTTATGGCAGAAATGCACCGGCCTTCGTGCTTTGAAGCAACTTCATGCCTTTCTGGTCGTCAATGGCCTTAATTCAAGCACATCTGCACTCAGAGAACTCATTTTCGTCAGTGCAATAGCTGTCTCTGGTACAATGGATTATGCCCACCAAGTGTTCGCTCAAATTACTGAACCGGATATCTTCATGTGGAACACCATGATCAGGGGTTCGGCTCAGAGCTTGAAGCCTGTAACTGCTGTTTCTCTTTATGCCCAGATGGAAAATCGTGGGGTTAGGCCTGATAAATTTACCTTCTCGTTCGTGCTCAAGGCCTGCACTAAGCTTTCTTGGGTTAAGTTGGGATTTGGGATTCATGGGAAGGTTCTGAAGTTTGGGTTTCAATCCAATAAATTTGTAAGGAATACTCTTATTTATTTCCATGCTAATTGTGGCGATTTAACCACTGCAAGGGCACTTTTTGACGCTTCTGCCAAAAGGGATGTTGTGCCTTGGTCAGCTTTGACGGCAGGCTATGCAAGAAGAGGGGAATTGGATGTTGCACGACAGTTGTTTGACGAAATGCCAATGAAAGATTTGGTCTCGTGGAATGTGATGATTACAGCATATGCAAAGCGTGGGGAGATGGAGAAGGCAAGGAAACTATTTGATGAAGCTCCGAAGAAAGATGTCGTGACTTGGAATGCGATGATTGCAGGATACGTGCTTTCTGGATCGAACAAGCAAGCCTTGGAGATGTTTAATGCAATGAGAGATATGGGACAAAGGCCGGATGATGTGACAATGTTGAGTATCTTGTCTGCTTCTGCTGATTTGGGTGATTTGGAAATTGGAAAGAAGATACATCGTTCCATTTTCGAAATGTGCTGCGGAGATTTAAGTGTGCTTCTTGGCAATGCAGTTGTAGACATGTACGCCAAGTGTGGAAGCATTGAGAATGCTTTGGAAGTTTTTCAAGGGATGAGCAATAAAGATATCTCCTCATGGAATTCAATAATAGGAGGATTAGCTTTTCATGGACATGCTGAGGAGTCACTAAATCTATTTCAAGAAATGCTCAGGTTGAAAATGAGGCCAAATGAAATCACTTTTGTTGGTGTGTTGGTTGCTTGTAGCCATGCTGGGAAAGTACAAGAAGGGCGCATGTACTTCAGTCTCATGAGAAACATGTACAAAATTGAGCCCAATATCAAGCATTACGGATGTATGGTAGACATATTGGGGCGTGCCGGGCTATTGATTGAAGCATTTGATTTTATAGACACAATGGAGATTGAACCTAATGCCATCATTTGGAGAACACTACTTGGGGCCTGTAGAGTTCATGGAGATGTTGAATTGGGAAGGCGCGCAAATGAGCAATTACTCAAAATGAAGAAGGATGAGAGTGGGGATTATGTACTGCTTTCTAACATATATGCATCACAAGGTGAGTGGGATGGAGTCCAGAAAGTGCGGAAGATGATGGATGATGGTGGGGTGAAAAAGGAGCCAGGTCGTAGCCTGATTGACACAGATTCCTTTCTGATGCATTTCTTGTTTGACTCAAAGCCCAAATTTGTAGAAGGCAGTTGA

Coding sequence (CDS)

ATGATCCGAAAGAGAACAAATGACAGTAGCTTCAACCGCTTTCAACGGTCTAGCTTATGGCAGAAATGCACCGGCCTTCGTGCTTTGAAGCAACTTCATGCCTTTCTGGTCGTCAATGGCCTTAATTCAAGCACATCTGCACTCAGAGAACTCATTTTCGTCAGTGCAATAGCTGTCTCTGGTACAATGGATTATGCCCACCAAGTGTTCGCTCAAATTACTGAACCGGATATCTTCATGTGGAACACCATGATCAGGGGTTCGGCTCAGAGCTTGAAGCCTGTAACTGCTGTTTCTCTTTATGCCCAGATGGAAAATCGTGGGGTTAGGCCTGATAAATTTACCTTCTCGTTCGTGCTCAAGGCCTGCACTAAGCTTTCTTGGGTTAAGTTGGGATTTGGGATTCATGGGAAGGTTCTGAAGTTTGGGTTTCAATCCAATAAATTTGTAAGGAATACTCTTATTTATTTCCATGCTAATTGTGGCGATTTAACCACTGCAAGGGCACTTTTTGACGCTTCTGCCAAAAGGGATGTTGTGCCTTGGTCAGCTTTGACGGCAGGCTATGCAAGAAGAGGGGAATTGGATGTTGCACGACAGTTGTTTGACGAAATGCCAATGAAAGATTTGGTCTCGTGGAATGTGATGATTACAGCATATGCAAAGCGTGGGGAGATGGAGAAGGCAAGGAAACTATTTGATGAAGCTCCGAAGAAAGATGTCGTGACTTGGAATGCGATGATTGCAGGATACGTGCTTTCTGGATCGAACAAGCAAGCCTTGGAGATGTTTAATGCAATGAGAGATATGGGACAAAGGCCGGATGATGTGACAATGTTGAGTATCTTGTCTGCTTCTGCTGATTTGGGTGATTTGGAAATTGGAAAGAAGATACATCGTTCCATTTTCGAAATGTGCTGCGGAGATTTAAGTGTGCTTCTTGGCAATGCAGTTGTAGACATGTACGCCAAGTGTGGAAGCATTGAGAATGCTTTGGAAGTTTTTCAAGGGATGAGCAATAAAGATATCTCCTCATGGAATTCAATAATAGGAGGATTAGCTTTTCATGGACATGCTGAGGAGTCACTAAATCTATTTCAAGAAATGCTCAGGTTGAAAATGAGGCCAAATGAAATCACTTTTGTTGGTGTGTTGGTTGCTTGTAGCCATGCTGGGAAAGTACAAGAAGGGCGCATGTACTTCAGTCTCATGAGAAACATGTACAAAATTGAGCCCAATATCAAGCATTACGGATGTATGGTAGACATATTGGGGCGTGCCGGGCTATTGATTGAAGCATTTGATTTTATAGACACAATGGAGATTGAACCTAATGCCATCATTTGGAGAACACTACTTGGGGCCTGTAGAGTTCATGGAGATGTTGAATTGGGAAGGCGCGCAAATGAGCAATTACTCAAAATGAAGAAGGATGAGAGTGGGGATTATGTACTGCTTTCTAACATATATGCATCACAAGGTGAGTGGGATGGAGTCCAGAAAGTGCGGAAGATGATGGATGATGGTGGGGTGAAAAAGGAGCCAGGTCGTAGCCTGATTGACACAGATTCCTTTCTGATGCATTTCTTGTTTGACTCAAAGCCCAAATTTGTAGAAGGCAGTTGA

Protein sequence

MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVSGTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVVPWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKDVVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAEESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDESGDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLIDTDSFLMHFLFDSKPKFVEGS
BLAST of Cla010318 vs. Swiss-Prot
Match: PP385_ARATH (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2)

HSP 1 Score: 662.9 bits (1709), Expect = 3.0e-189
Identity = 325/542 (59.96%), Postives = 419/542 (77.31%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIR++TND + NR +R  LWQ C  +R LKQ+HA +VVNGL S+ S + ELI+ ++++V 
Sbjct: 1   MIRRQTNDRTTNR-RRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVP 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           G + YAH++F +I +PD+ + N ++RGSAQS+KP   VSLY +ME RGV PD++TF+FVL
Sbjct: 61  GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KAC+KL W   GF  HGKV++ GF  N++V+N LI FHANCGDL  A  LFD SAK   V
Sbjct: 121 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
            WS++T+GYA+RG++D A +LFDEMP KD V+WNVMIT   K  EM+ AR+LFD   +KD
Sbjct: 181 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMI+GYV  G  K+AL +F  MRD G+ PD VT+LS+LSA A LGDLE GK++H 
Sbjct: 241 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 300

Query: 301 SIFEMCCGDLSVLLG----NAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFH 360
            I E      S+ +G    NA++DMYAKCGSI+ A+EVF+G+ ++D+S+WN++I GLA H
Sbjct: 301 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH 360

Query: 361 GHAEESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKH 420
            HAE S+ +F+EM RLK+ PNE+TF+GV++ACSH+G+V EGR YFSLMR+MY IEPNIKH
Sbjct: 361 -HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKH 420

Query: 421 YGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMK 480
           YGCMVD+LGRAG L EAF F+++M+IEPNAI+WRTLLGAC+++G+VELG+ ANE+LL M+
Sbjct: 421 YGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMR 480

Query: 481 KDESGDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLI--DTDSFLMHFLFDSK 537
           KDESGDYVLLSNIYAS G+WDGVQKVRKM DD  VKK  G SLI  D D  +M +L  S+
Sbjct: 481 KDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSE 540

BLAST of Cla010318 vs. Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.6e-113
Identity = 209/524 (39.89%), Postives = 320/524 (61.07%), Query Frame = 1

Query: 18  SLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVSGTMDYAHQVFAQITEPD 77
           SL   C  LRAL Q+H   +  G+++ +    +LI   AI++S  + YA ++     EPD
Sbjct: 10  SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD 69

Query: 78  IFMWNTMIRGSAQSLKPVTAVSLYAQMENRG-VRPDKFTFSFVLKACTKLSWVKLGFGIH 137
            FM+NT++RG ++S +P  +V+++ +M  +G V PD F+F+FV+KA      ++ GF +H
Sbjct: 70  AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129

Query: 138 GKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVVPWSALTAGYARRGELD 197
            + LK G +S+ FV  TLI  +  CG +  AR +FD   + ++V W+A+     R  ++ 
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVA 189

Query: 198 VARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKDVVTWNAMIAGYVLSGS 257
            AR++FD+M +++  SWNVM+  Y K GE+E A+++F E P +D V+W+ MI G   +GS
Sbjct: 190 GAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249

Query: 258 NKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFEMCCGDLSVLLGN 317
             ++   F  ++  G  P++V++  +LSA +  G  E GK +H  + E       V + N
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV-EKAGYSWIVSVNN 309

Query: 318 AVVDMYAKCGSIENALEVFQGMSNKD-ISSWNSIIGGLAFHGHAEESLNLFQEMLRLKMR 377
           A++DMY++CG++  A  VF+GM  K  I SW S+I GLA HG  EE++ LF EM    + 
Sbjct: 310 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 369

Query: 378 PNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCMVDILGRAGLLIEAFD 437
           P+ I+F+ +L ACSHAG ++EG  YFS M+ +Y IEP I+HYGCMVD+ GR+G L +A+D
Sbjct: 370 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 429

Query: 438 FIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDESGDYVLLSNIYASQGE 497
           FI  M I P AI+WRTLLGAC  HG++EL  +  ++L ++  + SGD VLLSN YA+ G+
Sbjct: 430 FICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGK 489

Query: 498 WDGVQKVRKMMDDGGVKKEPGRSLIDTDSFLMHFLFDSKPKFVE 540
           W  V  +RK M    +KK    SL++    +  F    K K ++
Sbjct: 490 WKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGID 532

BLAST of Cla010318 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.3e-107
Identity = 229/589 (38.88%), Postives = 329/589 (55.86%), Query Frame = 1

Query: 18  SLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVSGT-MDYAHQVFAQITEP 77
           SL   C  L++L+ +HA ++  GL+++  AL +LI    ++     + YA  VF  I EP
Sbjct: 38  SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97

Query: 78  DIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIH 137
           ++ +WNTM RG A S  PV+A+ LY  M + G+ P+ +TF FVLK+C K    K G  IH
Sbjct: 98  NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157

Query: 138 GKVLKFGFQSNKFVRNTLIYFH-------------------------------ANCGDLT 197
           G VLK G   + +V  +LI  +                               A+ G + 
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217

Query: 198 TARALFDASAKRDVVPWSALTAGYARRGE----LDVARQLF------DEMPMKDLVS--- 257
            A+ LFD    +DVV W+A+ +GYA  G     L++ + +       DE  M  +VS   
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277

Query: 258 -------------W-------------NVMITAYAKRGEMEKARKLFDEAPKKDVVTWNA 317
                        W             N +I  Y+K GE+E A  LF+  P KDV++WN 
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337

Query: 318 MIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFEMC 377
           +I GY      K+AL +F  M   G+ P+DVTMLSIL A A LG ++IG+ IH  I +  
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397

Query: 378 CGDLSVL-LGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAEESLNL 437
            G  +   L  +++DMYAKCG IE A +VF  + +K +SSWN++I G A HG A+ S +L
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457

Query: 438 FQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCMVDILG 497
           F  M ++ ++P++ITFVG+L ACSH+G +  GR  F  M   YK+ P ++HYGCM+D+LG
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517

Query: 498 RAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDESGDYVL 535
            +GL  EA + I+ ME+EP+ +IW +LL AC++HG+VELG    E L+K++ +  G YVL
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577

BLAST of Cla010318 vs. Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 4.8e-107
Identity = 214/526 (40.68%), Postives = 326/526 (61.98%), Query Frame = 1

Query: 23  CTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAV--SGTMDYAHQVFAQITEPDIFM 82
           C  +R L Q+HA  + +G    T A  E++   A +      +DYAH++F Q+ + + F 
Sbjct: 33  CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92

Query: 83  WNTMIRGSAQSL--KPVTAVSL-YAQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHG 142
           WNT+IRG ++S   K + A++L Y  M +  V P++FTF  VLKAC K   ++ G  IHG
Sbjct: 93  WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152

Query: 143 KVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASA-KRDVVPWSALTAGYARRGELD 202
             LK+GF  ++FV + L+  +  CG +  AR LF  +  ++D+V    +T    R GE+ 
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV---VMTDRRKRDGEI- 212

Query: 203 VARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKDVVTWNAMIAGYVLSGS 262
                         V WNVMI  Y + G+ + AR LFD+  ++ VV+WN MI+GY L+G 
Sbjct: 213 --------------VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 272

Query: 263 NKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFEMCCG-DLSVLLG 322
            K A+E+F  M+    RP+ VT++S+L A + LG LE+G+ +H  ++    G  +  +LG
Sbjct: 273 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH--LYAEDSGIRIDDVLG 332

Query: 323 NAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAEESLNLFQEMLRLKMR 382
           +A++DMY+KCG IE A+ VF+ +  +++ +W+++I G A HG A ++++ F +M +  +R
Sbjct: 333 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 392

Query: 383 PNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCMVDILGRAGLLIEAFD 442
           P+++ ++ +L ACSH G V+EGR YFS M ++  +EP I+HYGCMVD+LGR+GLL EA +
Sbjct: 393 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 452

Query: 443 FIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDESGDYVLLSNIYASQGE 502
           FI  M I+P+ +IW+ LLGACR+ G+VE+G+R    L+ M   +SG YV LSN+YASQG 
Sbjct: 453 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 512

Query: 503 WDGVQKVRKMMDDGGVKKEPGRSLIDTDSFLMHFLF--DSKPKFVE 540
           W  V ++R  M +  ++K+PG SLID D  L  F+   DS PK  E
Sbjct: 513 WSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKE 538

BLAST of Cla010318 vs. Swiss-Prot
Match: PP321_ARATH (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2)

HSP 1 Score: 373.2 bits (957), Expect = 4.7e-102
Identity = 193/491 (39.31%), Postives = 296/491 (60.29%), Query Frame = 1

Query: 18  SLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELI-FVSAIAVSGTMDYAHQVFAQITEP 77
           S  ++   L  ++Q HAF++  GL   T +  +L+ F +      T+ YAH +  +I  P
Sbjct: 44  SFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSP 103

Query: 78  DIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIH 137
           + F  N++IR  A S  P  A++++ +M    V PDK++F+FVLKAC      + G  IH
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163

Query: 138 GKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVVPWSALTAGYARRGELD 197
           G  +K G  ++ FV NTL+  +   G    AR + D    RD V W++L + Y  +G +D
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVD 223

Query: 198 VARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKDVVTWNAMIAGYVLSGS 257
            AR LFDEM  +++ SWN MI+ YA  G +++A+++FD  P +DVV+WNAM+  Y   G 
Sbjct: 224 EARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGC 283

Query: 258 NKQALEMFNAMRDMG-QRPDDVTMLSILSASADLGDLEIGKKIHRSIFEMCCGDLSVLLG 317
             + LE+FN M D   ++PD  T++S+LSA A LG L  G+ +H  I +    ++   L 
Sbjct: 284 YNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGI-EIEGFLA 343

Query: 318 NAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAEESLNLFQEMLRLKMR 377
            A+VDMY+KCG I+ ALEVF+  S +D+S+WNSII  L+ HG  +++L +F EM+    +
Sbjct: 344 TALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK 403

Query: 378 PNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCMVDILGRAGLLIEAFD 437
           PN ITF+GVL AC+H G + + R  F +M ++Y++EP I+HYGCMVD+LGR G + EA +
Sbjct: 404 PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEE 463

Query: 438 FIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDESGDYVLLSNIYASQGE 497
            ++ +  +  +I+  +LLGAC+  G +E   R   +LL++   +S  Y  +SN+YAS G 
Sbjct: 464 LVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGR 523

Query: 498 WDGVQKVRKMM 507
           W+ V   R+ M
Sbjct: 524 WEKVIDGRRNM 533


HSP 2 Score: 74.3 bits (181), Expect = 4.5e-12
Identity = 97/416 (23.32%), Postives = 177/416 (42.55%), Query Frame = 1

Query: 73  ITEPDIFMW-NTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVLKACTKLSWVKL 132
           + E DI+M    +IR  A +L+ +   +L              +F+   K+ T++     
Sbjct: 1   MVEKDIYMCAEIIIRPQAYNLRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQA-- 60

Query: 133 GFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTT---ARALFDASAKRDVVPWSALTAG 192
               H  +LK G   + F  + L+ F A   +  T   A ++ +     +    +++   
Sbjct: 61  ----HAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRA 120

Query: 193 YARRGELDVARQLFDEMPM----KDLVSWNVMITAYAKRGEMEKARKLFDEAPKKDVVT- 252
           YA     +VA  +F EM +     D  S+  ++ A A     E+ R++     K  +VT 
Sbjct: 121 YANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTD 180

Query: 253 ---WNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 312
               N ++  Y  SG  + A ++ + M       D V+  S+LSA  + G ++  + +  
Sbjct: 181 VFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAYLEKGLVDEARALFD 240

Query: 313 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 372
            + E      +V   N ++  YA  G ++ A EVF  M  +D+ SWN+++   A  G   
Sbjct: 241 EMEER-----NVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYN 300

Query: 373 ESLNLFQEML-RLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGC 432
           E L +F +ML     +P+  T V VL AC+  G + +G  +  +  + + IE        
Sbjct: 301 EVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE-WVHVYIDKHGIEIEGFLATA 360

Query: 433 MVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKM 476
           +VD+  + G + +A +       + +   W +++    VHG   LG+ A E   +M
Sbjct: 361 LVDMYSKCGKIDKALEVFRATS-KRDVSTWNSIISDLSVHG---LGKDALEIFSEM 396

BLAST of Cla010318 vs. TrEMBL
Match: A0A0A0KU97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G636660 PE=4 SV=1)

HSP 1 Score: 954.1 bits (2465), Expect = 7.1e-275
Identity = 467/514 (90.86%), Postives = 494/514 (96.11%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRKRTND+SFNRFQ+SSLWQKCT  R+LKQLHAFL+VNGLNS+TS LRELIFVSAI VS
Sbjct: 1   MIRKRTNDNSFNRFQQSSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           GTMDYAHQ+FAQI++PDIFMWNTMIRGSAQ+LKP TAVSLY QMENRGVRPDKFTFSFVL
Sbjct: 61  GTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KACTKLSWVKLGFGIHGKVLK GFQSN FVRNTLIYFHANCGDL TARALFDASAKR+VV
Sbjct: 121 KACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
           PWSALTAGYARRG+LDVARQLFDEMPMKDLVSWNVMITAYAK GEMEKARKLFDE PKKD
Sbjct: 181 PWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMIAGYVLS  NK+ALEMF+AMRD+GQRPDDVTMLSILSASADLGDLEIGKKIHR
Sbjct: 241 VVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHR 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
           SIF+MCCGDLSVLL NA++DMYAKCGSI NALEVFQGM  KD SSWNSIIGGLA HGHAE
Sbjct: 301 SIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAE 360

Query: 361 ESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCM 420
           ES+NLFQEMLRLKM+PNEITFV VLVACSHAGKV+EGRMYF+LM+N++KIEPNIKHYGCM
Sbjct: 361 ESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCM 420

Query: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDES 480
           VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKM+KDES
Sbjct: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDES 480

Query: 481 GDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKE 515
           GDYVLLSNIYASQGEWDGVQKVRK+MDDGGVKK+
Sbjct: 481 GDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKK 514

BLAST of Cla010318 vs. TrEMBL
Match: M5WT44_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003946mg PE=4 SV=1)

HSP 1 Score: 852.4 bits (2201), Expect = 2.9e-244
Identity = 405/539 (75.14%), Postives = 477/539 (88.50%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRK+ ND S  R QRSS WQKCT LRALKQ+HA +VVNG NS+ SA+R+LIF  A+A+S
Sbjct: 1   MIRKKPNDRSAYRHQRSSFWQKCTNLRALKQVHASMVVNGFNSNYSAIRQLIFAGAMAIS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           GT+DYAHQ+F  + EPD FMWNTMIRGSAQS  P+ A+ LY +MENR   PD FTF F+L
Sbjct: 61  GTIDYAHQLFVHVAEPDTFMWNTMIRGSAQSQNPLNAIVLYTRMENRHAMPDSFTFPFIL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KACTKLSWVK+G GIHGKV++FGF+SN FVRNTLIYFHANCGDL  A  LFDASAKRDVV
Sbjct: 121 KACTKLSWVKMGMGIHGKVVRFGFESNTFVRNTLIYFHANCGDLKIASELFDASAKRDVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
           PWSALTAGYARRG+LD ARQLFDEMP+KDLVSWNVMIT Y K+GEME ARKLFD+ P++D
Sbjct: 181 PWSALTAGYARRGKLDEARQLFDEMPVKDLVSWNVMITGYGKQGEMESARKLFDKVPERD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMIAGYVL GSN+QAL+MF  MR +G++PD+VTMLS+LSA  D+GDL++G+KIH 
Sbjct: 241 VVTWNAMIAGYVLCGSNEQALQMFEEMRSLGEKPDEVTMLSLLSACTDIGDLDVGQKIHS 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
           ++ EM  GD+S++LGNA++DMY+KCGSIE A+EVFQ M +KD+SSWNS+IGGLAFHGHAE
Sbjct: 301 ALLEMGRGDMSIILGNALIDMYSKCGSIERAVEVFQKMRDKDVSSWNSVIGGLAFHGHAE 360

Query: 361 ESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCM 420
           ES+NLF+EM RLK+RPNEITFVGVLVACSHAGKV+EGR YF+LM++ YKIEPNIKHYGCM
Sbjct: 361 ESVNLFEEMRRLKIRPNEITFVGVLVACSHAGKVEEGRRYFNLMKHKYKIEPNIKHYGCM 420

Query: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDES 480
           VD+LGRAGLL EAF+FI+ MEIEPNAI+WRTLLGACRVHG+VELGRRANE+LL+M++DES
Sbjct: 421 VDMLGRAGLLDEAFEFIEKMEIEPNAIVWRTLLGACRVHGNVELGRRANERLLEMRRDES 480

Query: 481 GDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLIDTD-SFLMHFLFDSKPKFV 539
           GD+VLLSNIYAS+GEW GV++VRK+MDD GVKKEPG SLI+TD S LMHFLFD +PK +
Sbjct: 481 GDFVLLSNIYASRGEWRGVEEVRKLMDDSGVKKEPGYSLIETDNSDLMHFLFDYRPKSI 539

BLAST of Cla010318 vs. TrEMBL
Match: F6H5U9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g01060 PE=4 SV=1)

HSP 1 Score: 843.6 bits (2178), Expect = 1.4e-241
Identity = 410/537 (76.35%), Postives = 468/537 (87.15%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRKR  D S +R QRS LW+ CT +  LKQ+HA ++V G NS+TSALRELI+ S+IA+S
Sbjct: 1   MIRKRLTDKSPSRQQRSQLWRSCTTIGTLKQIHASMIVKGFNSNTSALRELIYASSIAIS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           GTM YAHQ+F  ITEPD FMWNTMIRGSAQS  P+ A+SLY+QMEN  VRPDKFTF FVL
Sbjct: 61  GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KACT+L WVK+GFG+HG+V + GF+SN FVRNTLIYFHANCGDL  ARALFD SAKRDVV
Sbjct: 121 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
            WSALTAGYARRGEL VARQLFDEMP+KDLVSWNVMIT YAKRGEME ARKLFDE PK+D
Sbjct: 181 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMIAGYVL GSN+QALEMF  MR +G+ PD+VTMLS+LSA  DLGDL+ G++IH 
Sbjct: 241 VVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHC 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
            I EM   DLSVLLGNA++DMYAKCGSI  ALEVFQGM  KD+S+WNS++GGLAFHGHAE
Sbjct: 301 CISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAE 360

Query: 361 ESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCM 420
           +S++LF EM +LK+RP+EITFVGVLVACSHAG+V+EGR YF LMR+ Y IEPNI+HYGCM
Sbjct: 361 KSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCM 420

Query: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDES 480
           VD+LGRAGLL EAFDFIDTM+IEPNAI+WRTLLGACR+HG+VELGRRAN QLLKM+ DES
Sbjct: 421 VDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDES 480

Query: 481 GDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLIDTDS-FLMHFLFDSKPK 537
           GDYVLLSNIYAS+GEWDGV+KVRK+MDD GV+KE G SLI+ D+  LMHFLFDSKPK
Sbjct: 481 GDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFLFDSKPK 537

BLAST of Cla010318 vs. TrEMBL
Match: A0A059BEH9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01936 PE=4 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 9.1e-230
Identity = 395/537 (73.56%), Postives = 460/537 (85.66%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRKRTND S NR QRSSLW+ CT L ALKQ+ A LVV G NS+ +ALREL+F  AIAVS
Sbjct: 1   MIRKRTNDRSSNRQQRSSLWRNCTDLHALKQIQASLVVRGFNSNRAALRELVFAGAIAVS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           GT+ YA +VFAQI EPD+FMWNT+IRG+AQSL P  AV LY+QME+R VRPD FTF FVL
Sbjct: 61  GTIGYALRVFAQIAEPDLFMWNTVIRGAAQSLNPSNAVRLYSQMESRFVRPDDFTFPFVL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KACTKLSWVK+GFGIHG+++KFGF+SN FVRNTLIYFHAN G+L  AR  F+ SAKRDVV
Sbjct: 121 KACTKLSWVKMGFGIHGRIIKFGFESNTFVRNTLIYFHANRGELGIARHYFEGSAKRDVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
            WSALTAGYARRGEL VARQLFDEMP+KDLVSWNVMIT YAKRGEME ARKLFD+AP+KD
Sbjct: 181 AWSALTAGYARRGELHVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDQAPEKD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMIAGYVL G N+QALEMF  MR +G++PD+VTMLS+LSA A++GDLEIG+++H 
Sbjct: 241 VVTWNAMIAGYVLCGGNEQALEMFKEMRRVGEKPDEVTMLSLLSACAEMGDLEIGQRMHH 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
           S+ E+C GDL VLL NA++DMYAKCGSIE A  VF+GM  KDIS+WNSIIGGLAFHGHAE
Sbjct: 301 SLSELCLGDLGVLLENALIDMYAKCGSIERAFAVFKGMREKDISTWNSIIGGLAFHGHAE 360

Query: 361 ESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCM 420
           +S++LF+EM RL++ PNEIT VGVLVACSHAGKV+EG  YF++M++ Y IEPN +H GCM
Sbjct: 361 KSIDLFREMQRLEINPNEITMVGVLVACSHAGKVEEGHQYFNMMQDRYGIEPNTRHCGCM 420

Query: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDES 480
           VD+LGRAGLL EAF+FI +MEI PNAIIWRTLLGACRVHG+VELG+ ANE+LL M+ D+S
Sbjct: 421 VDMLGRAGLLEEAFEFIQSMEIAPNAIIWRTLLGACRVHGNVELGKLANEKLLFMRHDQS 480

Query: 481 GDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLIDTD-SFLMHFLFDSKPK 537
           GDYVLLSN+YA +GEWDGV+KVRK M D GV+KE G SL + D   LM+ LFDSKPK
Sbjct: 481 GDYVLLSNLYAFKGEWDGVEKVRKSMGDRGVRKEAGYSLAEGDGKSLMYHLFDSKPK 537

BLAST of Cla010318 vs. TrEMBL
Match: B9IK04_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0017s12200g PE=4 SV=1)

HSP 1 Score: 798.5 bits (2061), Expect = 5.0e-228
Identity = 390/538 (72.49%), Postives = 452/538 (84.01%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRKRTND S NR Q SSLW+ C  L ALKQ+HA L++ G NS+ +ALRELIF  A+ +S
Sbjct: 1   MIRKRTNDRSTNRKQPSSLWKNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTIS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           G ++YAHQVFAQITEPDIFMWNTM+RGS+QS  P   V LY QMENRGV+PDKFTFSF+L
Sbjct: 61  GAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           K CT+L W K GF +HGKVLK+GF+ N FVRNTLIYFH+NCGDL  AR++F    +R VV
Sbjct: 121 KGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
            WSALTAGYARRGEL VARQ+FDEMP+KDLVSWNVMIT Y K GEME AR LFDEAP+KD
Sbjct: 181 SWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWN MIAGYVL G  +QALEMF  MR++G+ PD+VTMLS+LSA ADLGDL++G+K+H 
Sbjct: 241 VVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHC 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
           SI EM  GDLSVLLGNA+VDMYAKCGSIE AL+VF+ M  KD+++WNS+IGGLAFHGHAE
Sbjct: 301 SISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAE 360

Query: 361 ESLNLFQEMLRLK-MRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGC 420
           ES+ LF EM  LK ++PNEITFVGV+VACSHAG V+EGR YF LMR  Y IEPN+ H+GC
Sbjct: 361 ESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGC 420

Query: 421 MVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDE 480
           MVD+LGRAGLL EAF+ I  MEIEPNAIIWRTLLGACRVHG+VELGR ANE+LLK+++DE
Sbjct: 421 MVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDE 480

Query: 481 SGDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLIDTDS-FLMHFLFDSKPK 537
           SGDYVLLSNIYAS GEWDG ++VRK+MDDGGV+KE GRSLI+ D   +M FLFD KPK
Sbjct: 481 SGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDRAVMQFLFDPKPK 538

BLAST of Cla010318 vs. NCBI nr
Match: gi|449447637|ref|XP_004141574.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Cucumis sativus])

HSP 1 Score: 995.3 bits (2572), Expect = 4.0e-287
Identity = 490/542 (90.41%), Postives = 518/542 (95.57%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRKRTND+SFNRFQ+SSLWQKCT  R+LKQLHAFL+VNGLNS+TS LRELIFVSAI VS
Sbjct: 1   MIRKRTNDNSFNRFQQSSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           GTMDYAHQ+FAQI++PDIFMWNTMIRGSAQ+LKP TAVSLY QMENRGVRPDKFTFSFVL
Sbjct: 61  GTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KACTKLSWVKLGFGIHGKVLK GFQSN FVRNTLIYFHANCGDL TARALFDASAKR+VV
Sbjct: 121 KACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
           PWSALTAGYARRG+LDVARQLFDEMPMKDLVSWNVMITAYAK GEMEKARKLFDE PKKD
Sbjct: 181 PWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMIAGYVLS  NK+ALEMF+AMRD+GQRPDDVTMLSILSASADLGDLEIGKKIHR
Sbjct: 241 VVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHR 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
           SIF+MCCGDLSVLL NA++DMYAKCGSI NALEVFQGM  KD SSWNSIIGGLA HGHAE
Sbjct: 301 SIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAE 360

Query: 361 ESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCM 420
           ES+NLFQEMLRLKM+PNEITFV VLVACSHAGKV+EGRMYF+LM+N++KIEPNIKHYGCM
Sbjct: 361 ESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCM 420

Query: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDES 480
           VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKM+KDES
Sbjct: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDES 480

Query: 481 GDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLIDTD-SFLMHFLFDSKPKFVE 540
           GDYVLLSNIYASQGEWDGVQKVRK+MDDGGVKK+ G SLID+D SFLMHFLFDSKP FVE
Sbjct: 481 GDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFLMHFLFDSKPNFVE 540

Query: 541 GS 542
           GS
Sbjct: 541 GS 542

BLAST of Cla010318 vs. NCBI nr
Match: gi|659118836|ref|XP_008459333.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Cucumis melo])

HSP 1 Score: 973.4 bits (2515), Expect = 1.6e-280
Identity = 482/542 (88.93%), Postives = 507/542 (93.54%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRKRTND+ FNRF  SSLWQKCT  RALKQLHAFL+VNGLNS+ S LRELIFVSA+ VS
Sbjct: 1   MIRKRTNDNRFNRFHHSSLWQKCTNFRALKQLHAFLIVNGLNSTNSVLRELIFVSAMVVS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           GTMDYAHQ+FAQIT+PDIFMWNTMIRGS QSLKP TAVSLY QM+NRGVRPDKFTFSFVL
Sbjct: 61  GTMDYAHQLFAQITQPDIFMWNTMIRGSTQSLKPATAVSLYTQMDNRGVRPDKFTFSFVL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KACTKLSW KLG  IHGK+LK GFQSN FVRNTLIYFHANCGDL  ARALFD SAKRDVV
Sbjct: 121 KACTKLSWDKLGIVIHGKILKSGFQSNTFVRNTLIYFHANCGDLAIARALFDDSAKRDVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
           PWSA+TAGYARRG+LDVARQLFDEMP+KDLVSWNVMITAYAK GEMEKARKLFDEAPKKD
Sbjct: 181 PWSAMTAGYARRGKLDVARQLFDEMPVKDLVSWNVMITAYAKLGEMEKARKLFDEAPKKD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMIAGYVLS  NK+ALEMF+AMR MGQRPDDVTMLSILSASADLGDLEIGKKIHR
Sbjct: 241 VVTWNAMIAGYVLSRLNKEALEMFDAMRAMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
           SIF+M CGDLSVLLGNA++DMYAKCGSI NA+EVFQGM  KD +SWNSIIGGLA HGHAE
Sbjct: 301 SIFDMRCGDLSVLLGNALIDMYAKCGSIGNAMEVFQGMRRKDTASWNSIIGGLALHGHAE 360

Query: 361 ESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCM 420
           ES+N FQEMLRLKM+PN+ITFVGVLVACSHAGKVQEGR YFSLMRNMYKIEPNIKHYGCM
Sbjct: 361 ESINQFQEMLRLKMKPNDITFVGVLVACSHAGKVQEGRTYFSLMRNMYKIEPNIKHYGCM 420

Query: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDES 480
           VDILGRAGLLIEAF FIDTME+EPNAIIWRTLLGACRVHGDVELGRRANEQLLKM+KDES
Sbjct: 421 VDILGRAGLLIEAFKFIDTMEVEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDES 480

Query: 481 GDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLIDTD-SFLMHFLFDSKPKFVE 540
           GDYVLLSNIYASQGEWDGVQKVRK+MDDGGVKK+ GRSLID D SFLMHFLFDSKPKFVE
Sbjct: 481 GDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGRSLIDADNSFLMHFLFDSKPKFVE 540

Query: 541 GS 542
           GS
Sbjct: 541 GS 542

BLAST of Cla010318 vs. NCBI nr
Match: gi|700197297|gb|KGN52474.1| (hypothetical protein Csa_5G636660 [Cucumis sativus])

HSP 1 Score: 954.1 bits (2465), Expect = 1.0e-274
Identity = 467/514 (90.86%), Postives = 494/514 (96.11%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRKRTND+SFNRFQ+SSLWQKCT  R+LKQLHAFL+VNGLNS+TS LRELIFVSAI VS
Sbjct: 1   MIRKRTNDNSFNRFQQSSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           GTMDYAHQ+FAQI++PDIFMWNTMIRGSAQ+LKP TAVSLY QMENRGVRPDKFTFSFVL
Sbjct: 61  GTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KACTKLSWVKLGFGIHGKVLK GFQSN FVRNTLIYFHANCGDL TARALFDASAKR+VV
Sbjct: 121 KACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
           PWSALTAGYARRG+LDVARQLFDEMPMKDLVSWNVMITAYAK GEMEKARKLFDE PKKD
Sbjct: 181 PWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMIAGYVLS  NK+ALEMF+AMRD+GQRPDDVTMLSILSASADLGDLEIGKKIHR
Sbjct: 241 VVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHR 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
           SIF+MCCGDLSVLL NA++DMYAKCGSI NALEVFQGM  KD SSWNSIIGGLA HGHAE
Sbjct: 301 SIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAE 360

Query: 361 ESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCM 420
           ES+NLFQEMLRLKM+PNEITFV VLVACSHAGKV+EGRMYF+LM+N++KIEPNIKHYGCM
Sbjct: 361 ESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCM 420

Query: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDES 480
           VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKM+KDES
Sbjct: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDES 480

Query: 481 GDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKE 515
           GDYVLLSNIYASQGEWDGVQKVRK+MDDGGVKK+
Sbjct: 481 GDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKK 514

BLAST of Cla010318 vs. NCBI nr
Match: gi|645249535|ref|XP_008230793.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Prunus mume])

HSP 1 Score: 865.5 bits (2235), Expect = 4.8e-248
Identity = 412/539 (76.44%), Postives = 482/539 (89.42%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRKR ND S NR QRSS WQKCT LRALKQ+HA +VVNG NS+ SA+RELIF  A+A+S
Sbjct: 1   MIRKRPNDRSANRHQRSSFWQKCTNLRALKQVHASMVVNGFNSNYSAIRELIFAGAMAIS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           GT+DYAHQ+F  + EPD FMWNTMIRGSAQS  P+ A+ LY QMENR  RPD FTF F+L
Sbjct: 61  GTIDYAHQLFVHVAEPDTFMWNTMIRGSAQSQNPLNAIVLYTQMENRHARPDSFTFPFIL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KACTKLSWVK+G GIHGKV++FGF+SN FVRNTLIYFHANCGDL  AR LFDASAKRDVV
Sbjct: 121 KACTKLSWVKMGMGIHGKVVRFGFESNTFVRNTLIYFHANCGDLKIARELFDASAKRDVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
           PWSALTAGYARRG+LD ARQLFDEMP+KDLVSWNVMIT YAK+GEME ARKLFDE P++D
Sbjct: 181 PWSALTAGYARRGKLDEARQLFDEMPVKDLVSWNVMITGYAKQGEMESARKLFDEVPERD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMIAGYVL GSN+QAL++F  MR +G++PD+VTMLS+LSA  D+GDL++G+KIH 
Sbjct: 241 VVTWNAMIAGYVLCGSNEQALQVFEEMRSLGEKPDEVTMLSLLSACTDIGDLDVGQKIHS 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
           ++ EM  GD+S++LGNA++DMY+KCGSIE ALEVFQ M +KD++SWNS+IGGLAFHGHAE
Sbjct: 301 ALQEMGRGDMSIILGNALIDMYSKCGSIERALEVFQRMRDKDVTSWNSVIGGLAFHGHAE 360

Query: 361 ESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCM 420
           ES+NLF+EM RLK+RPNEITFVGVLVACSHAGKV+EGR YF+LM+N YKIEPNIKHYGCM
Sbjct: 361 ESVNLFKEMRRLKIRPNEITFVGVLVACSHAGKVEEGRRYFNLMKNKYKIEPNIKHYGCM 420

Query: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDES 480
           VD+LGRAGLL EAF+FI+ MEIEPNAI+WRTLLGACRVHG+V+LGRRANE+LL+M++DES
Sbjct: 421 VDMLGRAGLLDEAFEFIEKMEIEPNAIVWRTLLGACRVHGNVKLGRRANERLLEMRRDES 480

Query: 481 GDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLIDTD-SFLMHFLFDSKPKFV 539
           GD+VLLSNIYAS+GEW GV++VRK+MDD GVKKEPG SLI+TD S LMHFL+DS+PK +
Sbjct: 481 GDFVLLSNIYASRGEWHGVEEVRKLMDDSGVKKEPGCSLIETDNSDLMHFLYDSRPKSI 539

BLAST of Cla010318 vs. NCBI nr
Match: gi|694402600|ref|XP_009376288.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Pyrus x bretschneideri])

HSP 1 Score: 858.6 bits (2217), Expect = 5.9e-246
Identity = 413/537 (76.91%), Postives = 480/537 (89.39%), Query Frame = 1

Query: 1   MIRKRTNDSSFNRFQRSSLWQKCTGLRALKQLHAFLVVNGLNSSTSALRELIFVSAIAVS 60
           MIRKR ND S NR QRSSLWQKCT LRALKQ+HA +VVNG NS+ SA+RELIF  A+A+S
Sbjct: 1   MIRKRPNDRSTNRQQRSSLWQKCTNLRALKQVHASMVVNGFNSNYSAIRELIFCGAMAIS 60

Query: 61  GTMDYAHQVFAQITEPDIFMWNTMIRGSAQSLKPVTAVSLYAQMENRGVRPDKFTFSFVL 120
           GT+DYAHQVF  ++EPD F+WNTMIRGSAQS  P+ AV LY +MENR  RPD FTF FVL
Sbjct: 61  GTIDYAHQVFDHVSEPDNFLWNTMIRGSAQSQCPLNAVLLYTRMENRHARPDGFTFPFVL 120

Query: 121 KACTKLSWVKLGFGIHGKVLKFGFQSNKFVRNTLIYFHANCGDLTTARALFDASAKRDVV 180
           KACTKLSWVK+G GIHGKV++FGF+SN FVRNTLIYFHANCGDL  A ALFD SAKRDVV
Sbjct: 121 KACTKLSWVKMGMGIHGKVVRFGFESNTFVRNTLIYFHANCGDLRIASALFDDSAKRDVV 180

Query: 181 PWSALTAGYARRGELDVARQLFDEMPMKDLVSWNVMITAYAKRGEMEKARKLFDEAPKKD 240
           PWSALTAGYARRG+LDVAR+LFDEMP KDLVSWNVMIT YAK+GEME ARKLFDE PK+D
Sbjct: 181 PWSALTAGYARRGKLDVARRLFDEMPFKDLVSWNVMITGYAKQGEMESARKLFDEVPKRD 240

Query: 241 VVTWNAMIAGYVLSGSNKQALEMFNAMRDMGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
           VVTWNAMIAGYVL GSN+QAL+MF  MR +G++PD+VTMLS+LSA AD+GDL++G+KIH 
Sbjct: 241 VVTWNAMIAGYVLCGSNEQALQMFEEMRSLGEKPDEVTMLSLLSACADIGDLDVGQKIHS 300

Query: 301 SIFEMCCGDLSVLLGNAVVDMYAKCGSIENALEVFQGMSNKDISSWNSIIGGLAFHGHAE 360
           ++ EM  GD+S++LGNAV+DMY+KCGSIE ALEVF+ M +KD+SSWNS+IGGLAFHGH+E
Sbjct: 301 ALLEMGSGDMSIILGNAVIDMYSKCGSIERALEVFRRMRDKDVSSWNSVIGGLAFHGHSE 360

Query: 361 ESLNLFQEMLRLKMRPNEITFVGVLVACSHAGKVQEGRMYFSLMRNMYKIEPNIKHYGCM 420
           ES+NLF+EM RLK+RPNEITFVGVLVACSHAGKV+EGR YF+LMR +Y+IEPNIKHYGCM
Sbjct: 361 ESVNLFKEMRRLKVRPNEITFVGVLVACSHAGKVEEGRGYFNLMRIVYRIEPNIKHYGCM 420

Query: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMKKDES 480
           VD+LGRAG+L EAF+FI+ MEI PNAI+WRTLLGACRVHG+VELGRRANE+LL+M++DES
Sbjct: 421 VDLLGRAGILNEAFEFIEKMEIAPNAIVWRTLLGACRVHGNVELGRRANERLLEMRRDES 480

Query: 481 GDYVLLSNIYASQGEWDGVQKVRKMMDDGGVKKEPGRSLIDTD-SFLMHFLFDSKPK 537
           GD+VLLSNIYAS+GEW GV++VRK+MDD GVKKE G SL++ D S LMHFLFDSKPK
Sbjct: 481 GDFVLLSNIYASRGEWQGVEEVRKLMDDSGVKKEAGCSLVEADNSSLMHFLFDSKPK 537

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP385_ARATH3.0e-18959.96Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN... [more]
PP122_ARATH2.6e-11339.89Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN... [more]
PPR21_ARATH1.3e-10738.88Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP425_ARATH4.8e-10740.68Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN... [more]
PP321_ARATH4.7e-10239.31Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0KU97_CUCSA7.1e-27590.86Uncharacterized protein OS=Cucumis sativus GN=Csa_5G636660 PE=4 SV=1[more]
M5WT44_PRUPE2.9e-24475.14Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003946mg PE=4 SV=1[more]
F6H5U9_VITVI1.4e-24176.35Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g01060 PE=4 SV=... [more]
A0A059BEH9_EUCGR9.1e-23073.56Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01936 PE=4 SV=1[more]
B9IK04_POPTR5.0e-22872.49Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
Match NameE-valueIdentityDescription
gi|449447637|ref|XP_004141574.1|4.0e-28790.41PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Cucumis sativu... [more]
gi|659118836|ref|XP_008459333.1|1.6e-28088.93PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Cucumis melo][more]
gi|700197297|gb|KGN52474.1|1.0e-27490.86hypothetical protein Csa_5G636660 [Cucumis sativus][more]
gi|645249535|ref|XP_008230793.1|4.8e-24876.44PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Prunus mume][more]
gi|694402600|ref|XP_009376288.1|5.9e-24676.91PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Pyrus x bretsc... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla010318Cla010318.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 417..441
score: 0.087coord: 181..208
score: 9.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 76..124
score: 2.8E-11coord: 239..285
score: 1.2E-10coord: 341..388
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 345..378
score: 4.0E-4coord: 242..275
score: 2.9E-5coord: 80..112
score: 8.7E-5coord: 211..241
score: 5.0E-7coord: 316..344
score: 0.0012coord: 182..209
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 209..239
score: 10.797coord: 178..208
score: 9.46coord: 377..407
score: 6.796coord: 240..274
score: 12.036coord: 275..305
score: 5.338coord: 112..146
score: 6.851coord: 413..443
score: 6.84coord: 342..376
score: 11.301coord: 147..177
score: 5.579coord: 311..341
score: 7.717coord: 445..475
score: 5.601coord: 479..513
score: 6.566coord: 77..111
score: 10
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 189..373
score: 4.0E-11coord: 421..478
score: 4.0
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 188..236
score: 6.83E-5coord: 440..497
score: 6.8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..21
score: 0.0coord: 60..520
score:
NoneNo IPR availablePANTHERPTHR24015:SF820SUBFAMILY NOT NAMEDcoord: 60..520
score: 0.0coord: 1..21
score:

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla010318Cucurbita pepo (Zucchini)cpewmB166
Cla010318Cucurbita pepo (Zucchini)cpewmB592
Cla010318Cucurbita pepo (Zucchini)cpewmB630
Cla010318Bottle gourd (USVL1VR-Ls)lsiwmB236
Cla010318Bottle gourd (USVL1VR-Ls)lsiwmB284
Cla010318Cucumber (Gy14) v2cgybwmB000
Cla010318Cucumber (Gy14) v2cgybwmB004
Cla010318Cucumber (Gy14) v2cgybwmB172
Cla010318Cucumber (Gy14) v2cgybwmB342
Cla010318Melon (DHL92) v3.6.1medwmB001
Cla010318Melon (DHL92) v3.6.1medwmB042
Cla010318Melon (DHL92) v3.6.1medwmB251
Cla010318Melon (DHL92) v3.6.1medwmB341
Cla010318Silver-seed gourdcarwmB0095
Cla010318Silver-seed gourdcarwmB0246
Cla010318Silver-seed gourdcarwmB0430
Cla010318Silver-seed gourdcarwmB0610
Cla010318Cucumber (Chinese Long) v3cucwmB004
Cla010318Cucumber (Chinese Long) v3cucwmB005
Cla010318Cucumber (Chinese Long) v3cucwmB195
Cla010318Cucumber (Chinese Long) v3cucwmB388
Cla010318Cucumber (Chinese Long) v3cucwmB390
Cla010318Watermelon (97103) v2wmwmbB012
Cla010318Watermelon (97103) v2wmwmbB024
Cla010318Watermelon (97103) v2wmwmbB032
Cla010318Wax gourdwgowmB000
Cla010318Wax gourdwgowmB533
Cla010318Watermelon (97103) v1wmwmB009
Cla010318Watermelon (97103) v1wmwmB018
Cla010318Watermelon (97103) v1wmwmB035
Cla010318Watermelon (97103) v1wmwmB027
Cla010318Cucumber (Gy14) v1cgywmB380
Cla010318Cucumber (Gy14) v1cgywmB519
Cla010318Cucumber (Gy14) v1cgywmB607
Cla010318Cucurbita maxima (Rimu)cmawmB219
Cla010318Cucurbita maxima (Rimu)cmawmB252
Cla010318Cucurbita maxima (Rimu)cmawmB363
Cla010318Cucurbita moschata (Rifu)cmowmB206
Cla010318Cucurbita moschata (Rifu)cmowmB243
Cla010318Wild cucumber (PI 183967)cpiwmB003
Cla010318Wild cucumber (PI 183967)cpiwmB185
Cla010318Wild cucumber (PI 183967)cpiwmB371
Cla010318Watermelon (Charleston Gray)wcgwmB269
Cla010318Melon (DHL92) v3.5.1mewmB003
Cla010318Melon (DHL92) v3.5.1mewmB041
Cla010318Melon (DHL92) v3.5.1mewmB142
Cla010318Melon (DHL92) v3.5.1mewmB259
Cla010318Melon (DHL92) v3.5.1mewmB343
Cla010318Watermelon (Charleston Gray)wcgwmB048
Cla010318Cucumber (Chinese Long) v2cuwmB003
Cla010318Cucumber (Chinese Long) v2cuwmB183
Cla010318Cucumber (Chinese Long) v2cuwmB366