Cla009137 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009137
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Glutamate decarboxylase (AHRD V1 **** A0EJ88_POPCN); contains Interpro domain(s) IPR010107 Glutamate decarboxylase
Location	Chr1 : 23118721 .. 23119352 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTCTCCAAGACTGCTTCTCAGACCGATGTCTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGGTAATTTCATTTCATTGATCGCGGATCAGATCGCTTTATTATATTCCTTTCTCTCCTTCATTTTAGATCTCCAAATTAATTACTCTGATTTCTGTTTTTCCGTGTGATTCTGTTTCTCGATGGATCCATTTCCTTTTCAATAATCTCCTGCTTTTTCCTTCTAGATTCAAAATGCCGGAAAATTCGATTCCCAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTGGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGGTACTTTTTTTTATCTCTCTGTTAGCTTCAATCGAAAGATTAGATCCATTTTTCGTTCTATCGTTTCTCTCCATGAACGGTTATTTTCCTCTGGAAATTCTCCTGAATTGGGAATTGCAGCGTTTTCGGTCGTTGCGGAATTCTACGACCGAGATTAAAATATTGCTAAAAAAATAA

mRNA sequence

ATGGTTCTCTCCAAGACTGCTTCTCAGACCGATGTCTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGATTCAAAATGCCGGAAAATTCGATTCCCAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTGGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGCGTTTTCGGTCGTTGCGGAATTCTACGACCGAGATTAAAATATTGCTAAAAAAATAA

Coding sequence (CDS)

ATGGTTCTCTCCAAGACTGCTTCTCAGACCGATGTCTCCGTCCACTCCACCTTCGCTTCTCGATATGTGCGAACCTCTCTCCCGAGATTCAAAATGCCGGAAAATTCGATTCCCAAGGAGGCTGCGTTTCAGATCATTAATGATGAACTCATGCTCGATGGAAACCCTAGGTTGAATTTGGCCTCCTTCGTCACTACTTGGATGGAGCCTGAGTGTGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAATATCCTGTCACTACAGAGCTTCAGCGTTTTCGGTCGTTGCGGAATTCTACGACCGAGATTAAAATATTGCTAAAAAAATAA

Protein sequence

MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQRFRSLRNSTTEIKILLKK

Homology

[Close]

BLAST of Cla009137 vs. Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-46
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKT SQ+DVS+HSTFASRYVRTSLPRFKMP+NSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTVSQSDVSIHSTFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKL+M +INKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLMMDSINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 6.6e-46
Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLS   S++DVSVHSTFASRYVRTSLPRFKMPENSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIM++INKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. Swiss-Prot
Match: DCE4_ARATH (Glutamate decarboxylase 4 OS=Arabidopsis thaliana GN=GAD4 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.9e-45
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKT S++DVS+HSTFASRYVR SLPRF+MPENSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTVSESDVSIHSTFASRYVRNSLPRFEMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKL+M +INKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLMMESINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. Swiss-Prot
Match: DCE3_ARATH (Glutamate decarboxylase 3 OS=Arabidopsis thaliana GN=GAD3 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-39
Identity = 77/97 (79.38%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKTAS++D S+HSTFASRYVR S+ RF++P+NSIPKEAA+QIINDEL  DGNPRLNL
Sbjct: 1  MVLSKTASKSDDSIHSTFASRYVRNSISRFEIPKNSIPKEAAYQIINDELKFDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKL+M +INKN V+MD+YPVTT+LQ
Sbjct: 61 ASFVTTWMEPECDKLMMESINKNNVEMDQYPVTTDLQ 97

[Close]

BLAST of Cla009137 vs. Swiss-Prot
Match: DCE5_ARATH (Glutamate decarboxylase 5 OS=Arabidopsis thaliana GN=GAD5 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.3e-38
Identity = 76/97 (78.35%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVL+ T S +D  +HSTFASRYVR  +PRFKMP++ +PK+AA+Q+INDELMLDGNPRLNL
Sbjct: 1  MVLA-TNSDSDEHLHSTFASRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIM ++NKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQ 96

[Close]

BLAST of Cla009137 vs. TrEMBL
Match: W9RQ01_9ROSA (Glutamate decarboxylase 1 OS=Morus notabilis GN=L484_007797 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-46
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKTASQ+DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASQSDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIMA+INKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. TrEMBL
Match: A0A0A0KPY1_CUCSA (Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G348050 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-46
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKTASQ+DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASQSDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIMA+INKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. TrEMBL
Match: A0A151S0M5_CAJCA (Glutamate decarboxylase OS=Cajanus cajan GN=KK1_029956 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.8e-46
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKTASQTDVSVHSTFASRYVR SLPRFKMPE SIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASQTDVSVHSTFASRYVRASLPRFKMPEQSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. TrEMBL
Match: A0A068U0N0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036817001 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.8e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MV+SKTASQ+DVSVHSTFASRYVR SLPRFKMPENSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVISKTASQSDVSVHSTFASRYVRASLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. TrEMBL
Match: A0A0D2T1T7_GOSRA (Glutamate decarboxylase OS=Gossypium raimondii GN=B456_008G169300 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-45
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKTAS+TDVSVHSTFASRYVRTSLPRFKMPENSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASETDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIM +INKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. NCBI nr
Match: gi|659126378|ref|XP_008463152.1| (PREDICTED: glutamate decarboxylase 1 [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 5.9e-47
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIM+AINKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMSAINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. NCBI nr
Match: gi|703116132|ref|XP_010101062.1| (Glutamate decarboxylase 1 [Morus notabilis])

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKTASQ+DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASQSDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIMA+INKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. NCBI nr
Match: gi|778702173|ref|XP_011655149.1| (PREDICTED: glutamate decarboxylase 1 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-46
Identity = 95/97 (97.94%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKTASQ+DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASQSDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIMA+INKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. NCBI nr
Match: gi|1012337062|gb|KYP48346.1| (Glutamate decarboxylase 1 [Cajanus cajan])

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MVLSKTASQTDVSVHSTFASRYVR SLPRFKMPE SIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASQTDVSVHSTFASRYVRASLPRFKMPEQSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 97

[Close]

BLAST of Cla009137 vs. NCBI nr
Match: gi|661894685|emb|CDP01684.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60
          MV+SKTASQ+DVSVHSTFASRYVR SLPRFKMPENSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVISKTASQSDVSVHSTFASRYVRASLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 98
          ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ
Sbjct: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ 97

The following BLAST results are available for this feature:

BLAST of Cla009137 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DCE_PETHY	2.3e-46	91.75	Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1	[more]
DCE1_ARATH	6.6e-46	91.75	Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2	[more]
DCE4_ARATH	1.9e-45	89.69	Glutamate decarboxylase 4 OS=Arabidopsis thaliana GN=GAD4 PE=1 SV=1	[more]
DCE3_ARATH	1.6e-39	79.38	Glutamate decarboxylase 3 OS=Arabidopsis thaliana GN=GAD3 PE=2 SV=1	[more]
DCE5_ARATH	2.3e-38	78.35	Glutamate decarboxylase 5 OS=Arabidopsis thaliana GN=GAD5 PE=2 SV=1	[more]

BLAST of Cla009137 vs. TrEMBL


Match Name	E-value	Identity	Description
W9RQ01_9ROSA	1.2e-46	97.94	Glutamate decarboxylase 1 OS=Morus notabilis GN=L484_007797 PE=3 SV=1	[more]
A0A0A0KPY1_CUCSA	1.2e-46	97.94	Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G348050 PE=3 SV=1	[more]
A0A151S0M5_CAJCA	7.8e-46	96.91	Glutamate decarboxylase OS=Cajanus cajan GN=KK1_029956 PE=3 SV=1	[more]
A0A068U0N0_COFCA	7.8e-46	95.88	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036817001 PE=4 SV=1	[more]
A0A0D2T1T7_GOSRA	1.0e-45	95.88	Glutamate decarboxylase OS=Gossypium raimondii GN=B456_008G169300 PE=3 SV=1	[more]

BLAST of Cla009137 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126378\|ref\|XP_008463152.1\|	5.9e-47	98.97	PREDICTED: glutamate decarboxylase 1 [Cucumis melo]	[more]
gi\|703116132\|ref\|XP_010101062.1\|	1.7e-46	97.94	Glutamate decarboxylase 1 [Morus notabilis]	[more]
gi\|778702173\|ref\|XP_011655149.1\|	1.7e-46	97.94	PREDICTED: glutamate decarboxylase 1 [Cucumis sativus]	[more]
gi\|1012337062\|gb\|KYP48346.1\|	1.1e-45	96.91	Glutamate decarboxylase 1 [Cajanus cajan]	[more]
gi\|661894685\|emb\|CDP01684.1\|	1.1e-45	95.88	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002129	PyrdxlP-dep_de-COase
IPR015424	PyrdxlP-dep_Trfase

Vocabulary: **Molecular Function**
Term	Definition
GO:0016831	carboxy-lyase activity
GO:0030170	pyridoxal phosphate binding

Vocabulary: **Biological Process**
Term	Definition
GO:0019752	carboxylic acid metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0019530	taurine metabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0006538	glutamate catabolic process
biological_process	GO:0046686	response to cadmium ion
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004351	glutamate decarboxylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0016831	carboxy-lyase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0005516	calmodulin binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU70414	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla009137	Cla009137.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU70414	WMU70414	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002129	Pyridoxal phosphate-dependent decarboxylase	PFAM	PF00282	Pyridoxal_deC	coord: 33..97 score: 8.1
IPR015424	Pyridoxal phosphate-dependent transferase	unknown	SSF53383	PLP-dependent transferases	coord: 15..97 score: 2.02
None	No IPR available	PANTHER	PTHR11999	GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE	coord: 1..97 score: 1.4
None	No IPR available	PANTHER	PTHR11999:SF92	SUBFAMILY NOT NAMED	coord: 1..97 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla009137	Csa5G348050	Cucumber (Chinese Long) v2	cuwmB412
Cla009137	MELO3C025078	Melon (DHL92) v3.5.1	mewmB032
Cla009137	ClCG01G008630	Watermelon (Charleston Gray)	wcgwmB144
Cla009137	CSPI05G13710	Wild cucumber (PI 183967)	cpiwmB422
Cla009137	CmaCh15G007620	Cucurbita maxima (Rimu)	cmawmB279
Cla009137	CmaCh04G022750	Cucurbita maxima (Rimu)	cmawmB711
Cla009137	CmoCh04G023800	Cucurbita moschata (Rifu)	cmowmB707
Cla009137	CmoCh15G007900	Cucurbita moschata (Rifu)	cmowmB269
Cla009137	Lsi09G009030	Bottle gourd (USVL1VR-Ls)	lsiwmB029
Cla009137	Cp4.1LG13g05410	Cucurbita pepo (Zucchini)	cpewmB185
Cla009137	Cp4.1LG01g19660	Cucurbita pepo (Zucchini)	cpewmB441
Cla009137	CsGy5G013610	Cucumber (Gy14) v2	cgybwmB385
Cla009137	MELO3C025078.2	Melon (DHL92) v3.6.1	medwmB031
Cla009137	Carg18287	Silver-seed gourd	carwmB0524
Cla009137	Carg01443	Silver-seed gourd	carwmB0831
Cla009137	CsaV3_5G020650	Cucumber (Chinese Long) v3	cucwmB437
Cla009137	Bhi12G001042	Wax gourd	wgowmB078

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla009137	Melon (DHL92) v3.5.1	mewmB026
Cla009137	Melon (DHL92) v3.6.1	medwmB023
Cla009137	Watermelon (97103) v2	wmwmbB237