Cla008448 (gene) Watermelon (97103) v1

Overview
NameCla008448
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionU-box domain-containing protein (AHRD V1 ***- D7MRW3_ARALL); contains Interpro domain(s) IPR003613 U box domain
LocationChr1 : 9195452 .. 9196678 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGAGATGACTTATGTATTACAATTCCGAGCGATTTCAGATGTCCGATTTCGCTAGACGTGATGAAATCCCCTGTGAGTTTATGTACCGGAGTGACTTACGACCGTTCCAGTATCCAGAAATGGCTTGATAATGGAAACAACACTTGTCCGGCCACCATGCAGGTCCTTCAAACCAAGGAGTTCGTTCCCAATCACAATCTCCACCGCCTCATTCAGATTTGGTCGGATTCCCTTCACCAACGACTCCACTCCCCTGTTTCCGACTCTGCTCTCTCCTCCGATCAAGTTCTCCGCCTCGTCAACCGTATGGAAGACGATCAATCACGCGCTGATTCTCTTCCGCGGCTTGTCTCTTTCGCTTCCGAATCGGTGGAGAATCGGAGGCTTCTCTGCGGAATTGACGGACTCTTGCCGGTACTCGTCGATCTTCTTGGCAATGTCGATGGCGGCGTTTTGGTTGAGCAGACGGTGAGGTTGTTGCATTTGATTCGGAGTGAAATAGAGGATAAGGAGCGGTTTGTGAAGACGATGTTGAAGATGGATCGTAATTGTATTTCGTCTCTGCTTCTGCTTCTGCGGAAAGGAACCGTCGAATTGAAAATCTGTTCCGCTAATCTGTTGGAGTATCTCGCCATCGATGCGGAAGCGAAGATTAGAATTGCCGAAACGGATGGATTGATGCAAGAATTACTGAAATTAATCAATTCAGAGAACGATACAACCTTGATCGAATCCGTTCTATCATGCCTAATTTCAATTTCAATTCCGAAACGAATCAAAATCAAATTAATTCAGCTGGGAGTGATAAAATCAGTAACGAAGCTTCTCTCAGAATCGAACTCGAGTTCAAGCATTTCGATGACGGAGAAGGTTCTAAAAGTACTGGAAACGGCATCGACGGTGAGAGAAGGGAGGACAGAGATCGGAGAGGACTCGGTGTGCGTGGCGGCGATAGTACAGAAGGTGCTGAAGGTATCGAACACGGCGACGGAGCACGCGGTGACGACGCTGTGGAGCGTTTGTTATCTGTTCAGAGACGAGAAGGCGGCGGAAGCGTTGACGAAGGCGAACGGATTGACGAAGATTTTGTTGTTAATGCAGAGCAATTGTTCGGCGCCGGTGAGGCAGATGGCGAGAGATCTGTTGAAGATTTTTCGGATCAATTCAAAATCGTGCCTATCGAGTTACGATACAAAAACTACGCATATCATGCCCTGTTAA

mRNA sequence

ATGGTGAGAGATGACTTATGTATTACAATTCCGAGCGATTTCAGATGTCCGATTTCGCTAGACGTGATGAAATCCCCTGTGAGTTTATGTACCGGAGTGACTTACGACCGTTCCAGTATCCAGAAATGGCTTGATAATGGAAACAACACTTGTCCGGCCACCATGCAGGTCCTTCAAACCAAGGAGTTCGTTCCCAATCACAATCTCCACCGCCTCATTCAGATTTGGTCGGATTCCCTTCACCAACGACTCCACTCCCCTGTTTCCGACTCTGCTCTCTCCTCCGATCAAGTTCTCCGCCTCGTCAACCGTATGGAAGACGATCAATCACGCGCTGATTCTCTTCCGCGGCTTGTCTCTTTCGCTTCCGAATCGGTGGAGAATCGGAGGCTTCTCTGCGGAATTGACGGACTCTTGCCGGTACTCGTCGATCTTCTTGGCAATGTCGATGGCGGCGTTTTGGTTGAGCAGACGGTGAGGTTGTTGCATTTGATTCGGAGTGAAATAGAGGATAAGGAGCGGTTTGTGAAGACGATGTTGAAGATGGATCGTAATTGTATTTCGTCTCTGCTTCTGCTTCTGCGGAAAGGAACCGTCGAATTGAAAATCTGTTCCGCTAATCTGTTGGAGTATCTCGCCATCGATGCGGAAGCGAAGATTAGAATTGCCGAAACGGATGGATTGATGCAAGAATTACTGAAATTAATCAATTCAGAGAACGATACAACCTTGATCGAATCCGTTCTATCATGCCTAATTTCAATTTCAATTCCGAAACGAATCAAAATCAAATTAATTCAGCTGGGAGTGATAAAATCAGTAACGAAGCTTCTCTCAGAATCGAACTCGAGTTCAAGCATTTCGATGACGGAGAAGGTTCTAAAAGTACTGGAAACGGCATCGACGGTGAGAGAAGGGAGGACAGAGATCGGAGAGGACTCGGTGTGCGTGGCGGCGATAGTACAGAAGGTGCTGAAGGTATCGAACACGGCGACGGAGCACGCGGTGACGACGCTGTGGAGCGTTTGTTATCTGTTCAGAGACGAGAAGGCGGCGGAAGCGTTGACGAAGGCGAACGGATTGACGAAGATTTTGTTGTTAATGCAGAGCAATTGTTCGGCGCCGGTGAGGCAGATGGCGAGAGATCTGTTGAAGATTTTTCGGATCAATTCAAAATCGTGCCTATCGAGTTACGATACAAAAACTACGCATATCATGCCCTGTTAA

Coding sequence (CDS)

ATGGTGAGAGATGACTTATGTATTACAATTCCGAGCGATTTCAGATGTCCGATTTCGCTAGACGTGATGAAATCCCCTGTGAGTTTATGTACCGGAGTGACTTACGACCGTTCCAGTATCCAGAAATGGCTTGATAATGGAAACAACACTTGTCCGGCCACCATGCAGGTCCTTCAAACCAAGGAGTTCGTTCCCAATCACAATCTCCACCGCCTCATTCAGATTTGGTCGGATTCCCTTCACCAACGACTCCACTCCCCTGTTTCCGACTCTGCTCTCTCCTCCGATCAAGTTCTCCGCCTCGTCAACCGTATGGAAGACGATCAATCACGCGCTGATTCTCTTCCGCGGCTTGTCTCTTTCGCTTCCGAATCGGTGGAGAATCGGAGGCTTCTCTGCGGAATTGACGGACTCTTGCCGGTACTCGTCGATCTTCTTGGCAATGTCGATGGCGGCGTTTTGGTTGAGCAGACGGTGAGGTTGTTGCATTTGATTCGGAGTGAAATAGAGGATAAGGAGCGGTTTGTGAAGACGATGTTGAAGATGGATCGTAATTGTATTTCGTCTCTGCTTCTGCTTCTGCGGAAAGGAACCGTCGAATTGAAAATCTGTTCCGCTAATCTGTTGGAGTATCTCGCCATCGATGCGGAAGCGAAGATTAGAATTGCCGAAACGGATGGATTGATGCAAGAATTACTGAAATTAATCAATTCAGAGAACGATACAACCTTGATCGAATCCGTTCTATCATGCCTAATTTCAATTTCAATTCCGAAACGAATCAAAATCAAATTAATTCAGCTGGGAGTGATAAAATCAGTAACGAAGCTTCTCTCAGAATCGAACTCGAGTTCAAGCATTTCGATGACGGAGAAGGTTCTAAAAGTACTGGAAACGGCATCGACGGTGAGAGAAGGGAGGACAGAGATCGGAGAGGACTCGGTGTGCGTGGCGGCGATAGTACAGAAGGTGCTGAAGGTATCGAACACGGCGACGGAGCACGCGGTGACGACGCTGTGGAGCGTTTGTTATCTGTTCAGAGACGAGAAGGCGGCGGAAGCGTTGACGAAGGCGAACGGATTGACGAAGATTTTGTTGTTAATGCAGAGCAATTGTTCGGCGCCGGTGAGGCAGATGGCGAGAGATCTGTTGAAGATTTTTCGGATCAATTCAAAATCGTGCCTATCGAGTTACGATACAAAAACTACGCATATCATGCCCTGTTAA

Protein sequence

MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNHNLHRLIQIWSDSLHQRLHSPVSDSALSSDQVLRLVNRMEDDQSRADSLPRLVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGGVLVEQTVRLLHLIRSEIEDKERFVKTMLKMDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQELLKLINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEKVLKVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC
Homology
[Close]
BLAST of Cla008448 vs. Swiss-Prot
Match: PUB27_ARATH (U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 9.5e-124
Identity = 227/419 (54.18%), Postives = 311/419 (74.22%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           M +DDLCIT+P+ FRCPISLDVMKSPVSLCTGVTYDR+SIQ+WLD GNNTCPATMQ+LQ 
Sbjct: 1   MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSPVSD-SALSSDQVLRLVNRMEDDQSRADS---LP 120
           K+F+PN  L RLI+IWSDS+ +R     ++ +A + D++   ++R++ ++   D    L 
Sbjct: 61  KDFIPNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREVLS 120

Query: 121 RLVSFASESVENRRLLCGIDGLLPVLVDLLGNVD-------GGVLVEQTVRLLHLIRSEI 180
           ++V F  ES +NR  L G D  + +LVDL+  VD         ++V++ V++L  IRS++
Sbjct: 121 KIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKV 180

Query: 181 EDKERFVKTMLKMDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLM 240
            D+ RF   +L   R+ +S ++ L + G VELKI  A LLE++A+DAE+K+ IAE DGL+
Sbjct: 181 SDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGLI 240

Query: 241 QELLKLINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISM 300
            EL+K I+ ++D +LIES LSCLI+IS PKR+K+ L++  +I  VTKLLS+S SS S+S+
Sbjct: 241 TELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVSV 300

Query: 301 TEKVLKVLETASTVREGRTEI-GEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRD 360
           TEK LK+LE  ++ +EGR+EI G D  C+  +V+K++KVS  ATEHAVT LWSV YLF++
Sbjct: 301 TEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYLFKE 360

Query: 361 EKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
           +KA EA+T  NG+TKILLL+QSNCS  VR+M  DLLK+F++NS+SCLS+YDTKTTHIMP
Sbjct: 361 DKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVNSRSCLSAYDTKTTHIMP 419

[Close]
BLAST of Cla008448 vs. Swiss-Prot
Match: PUB28_ARATH (U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28 PE=1 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.0e-109
Identity = 213/415 (51.33%), Postives = 300/415 (72.29%), Query Frame = 1 

Query: 1   MVRDDLCIT-IPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQ 60
           M  DDL IT +P  F+CPISLDVMKSPVSL TGVTYDR SIQ+WLD+GNNTCPATMQ+LQ
Sbjct: 1   MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQ 60

Query: 61  TKEFVPNHNLHRLIQIWSDSLHQRL--HSPVSDSALSSDQVLRLVNRMEDDQSRADSLPR 120
            KEFVPN  LHRLI  WSDS+++R    SP SD+  + D++   + R   +    D+  +
Sbjct: 61  NKEFVPNLTLHRLIDHWSDSINRRADSESPESDTP-TRDEINAAIERFRIEN---DARSK 120

Query: 121 LVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGG-----VLVEQTVRLLHLIRSEIEDK 180
           ++ FA ES ENR  L G D  + +LVDL+ +         +LV + V++L +IR +I D+
Sbjct: 121 ILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDR 180

Query: 181 ERFVKTMLKMDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQEL 240
            R    +L    +C++S  LL+++G  +LKI  + +LE++A+DAE+K+ IA+ +GL+ E+
Sbjct: 181 RRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEI 240

Query: 241 LKLINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEK 300
           +KLI+S++D++LIE+ LS LI+I+  KR+K+ LI+  ++  +T LL++   ++S+S+TEK
Sbjct: 241 IKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDP--TTSVSVTEK 300

Query: 301 VLKVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAA 360
            LK+LE  S+ +EGR+EI  D VCV  +V K++KVS  ATEHAVT LWSVCYLF+++KA 
Sbjct: 301 CLKLLEAISSCKEGRSEIC-DGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQ 360

Query: 361 EALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
           +A+ + NG+TKILLL+QSNCS  VR M  DLLK+F++NS+SCLS Y+TKTTHIMP
Sbjct: 361 DAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRSCLSVYETKTTHIMP 408

[Close]
BLAST of Cla008448 vs. Swiss-Prot
Match: PUB29_ARATH (U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29 PE=1 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.1e-94
Identity = 196/414 (47.34%), Postives = 287/414 (69.32%), Query Frame = 1 

Query: 8   ITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFVPNH 67
           IT+PS F+CPISLDVM+SPVSLCTGVTYDR+SIQ+WLD GNNTCPATMQ+L+TK+FVPN 
Sbjct: 10  ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69

Query: 68  NLHRLIQIWSDSLHQR-------LHSPVSDSALSSDQVLRLVNRMEDDQSRADSLPRLVS 127
            L RLI IWSDS+ +R       L+ P      + ++V  L+ R+       ++L ++V 
Sbjct: 70  TLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERL----MSLENLMKIVR 129

Query: 128 FASESVENRRLLCGIDGLLPVLVDLLGNVDGGV-LVEQTVRLLHLIRSEIEDKERFVKTM 187
           F  +S  NR  L      +P+LVD++      + LV   +R+L  I+    D+ER    M
Sbjct: 130 FVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIK---VDRERLSNLM 189

Query: 188 LKMD-RNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQELLKLIN- 247
           L  D  +C++++LL +++G +E KI S  +L++++ DA++K+ IAE DG++ E++K I+ 
Sbjct: 190 LANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISI 249

Query: 248 -SENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEKVLKV 307
              +D +LIE+ LS LI+IS  KR++ KLI    I  +  +L  + + +++++TEK LK+
Sbjct: 250 TESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILL-TETLTNVAVTEKSLKL 309

Query: 308 LETASTVREGRTEI-GEDS-VCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAA-E 367
           LET S+ REGR EI G+D+  CV  +V+K+LKVS TATEHAVT LW +CY+FR++K   E
Sbjct: 310 LETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTVEE 369

Query: 368 ALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
            + ++NG+TK+L+++QSNCSA VRQMA+DL+K+ + NS S L++Y+TKTTHIMP
Sbjct: 370 TVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNS-SALAAYETKTTHIMP 414

[Close]
BLAST of Cla008448 vs. Swiss-Prot
Match: PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-39
Identity = 108/386 (27.98%), Postives = 193/386 (50.00%), Query Frame = 1 

Query: 8   ITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGN-NTCPATMQVLQTKEFVPN 67
           I IP  F CPISL++MK PV + TG+TYDR SI+KWL  G  N+CP T Q +   +  PN
Sbjct: 10  IEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPN 69

Query: 68  HNLHRLIQIWS--DSLHQRLHSPVSDSALSSDQVLRLV-NRMEDDQSRADSLPRLVSFAS 127
           H L RLIQ W   ++ +     P     +   ++ +L+ +     +++   L RL    S
Sbjct: 70  HTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQIVS 129

Query: 128 ESVENRRLLCGIDGLLPVLVDLLGN-VDGGVLVEQTVRLLHLIRSEIEDKERFVKTML-- 187
           E+  N+R L    G+   L +++ N  + G L ++ + LL+     +E  E  +K +L  
Sbjct: 130 ENATNKRCLEAA-GVPEFLANIVSNDSENGSLTDEALNLLY----HLETSETVLKNLLNN 189

Query: 188 KMDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQELLKLINSEN 247
           K D N + SL  ++++G  E ++ +  LL+ +   A+    +     +  E++++++   
Sbjct: 190 KKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRI 249

Query: 248 DTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEKVLKVLETA 307
                ++ +  L++I    R + K ++ GVI  + +LL + + +S     E  + VL+  
Sbjct: 250 SQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLL 309

Query: 308 STVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEALTKANG 367
               EGR E       +A + +K+L+VS TA++ AV  L SV            + +   
Sbjct: 310 CQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGV 369

Query: 368 LTKILLLMQSNCSAPVRQMARDLLKI 387
           + K+ L++Q +C    ++ A++LLK+
Sbjct: 370 VAKLCLVLQVSCGGKTKEKAKELLKL 390

[Close]
BLAST of Cla008448 vs. Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-36
Identity = 117/398 (29.40%), Postives = 198/398 (49.75%), Query Frame = 1 

Query: 5   DLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNN-TCPATMQVLQTKEF 64
           DL I IP  FRCPISL++M+ PV++CTG TYDR+SI+ W+  GNN TCP T   L     
Sbjct: 9   DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68

Query: 65  VPNHNLHRLIQIWSDSLH----QRLHSPVSDSALSS-----DQVLRLVNRMEDDQSRADS 124
           +PNH L RLIQ W  +      +R+ +P   +  +S      Q   +       +SRA +
Sbjct: 69  IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAA 128

Query: 125 LPRLVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGGVLVEQTVRLLHLIRSEIEDKER 184
           L RL  FA +S +NR L+   +    ++  L        LV +++ LL ++   I +  +
Sbjct: 129 LRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVML--PITEPNQ 188

Query: 185 FVKTMLKMDRNCISSLLLLLRKGTVELKICSANLLEYLAI---DAEAKIRIAETDGLMQE 244
           FV   +  D   +  L  LL   ++E ++ +A L+E ++     A+ K  I+ ++ + + 
Sbjct: 189 FVS--ISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEG 248

Query: 245 LLKLI-NSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMT 304
           +L L+ N  +    ++  +  L ++   K  +   I  G  + +   L+          T
Sbjct: 249 VLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCD---T 308

Query: 305 EKVLKVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEK 364
           E+ L  +E      EG    GE ++ V  +V+ +L+VS+ ATE+A   L ++C    +E+
Sbjct: 309 ERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC--TAEER 368

Query: 365 AAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFR 389
             E    A  + ++LL++QS C+   ++ A+ LLK+ R
Sbjct: 369 WREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLR 397

[Close]
BLAST of Cla008448 vs. TrEMBL
Match: A0A0A0KJ12_CUCSA (U-box domain-containing protein 27 OS=Cucumis sativus GN=Csa_6G484010 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 3.6e-202
Identity = 368/408 (90.20%), Postives = 388/408 (95.10%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MV+DDLCITIP+DFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPTDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSPVSDSALSSDQVLRLVNRMEDDQSRADSLPRLVS 120
           K+FVPNHNLHRLIQIWSDSLHQRLHSP+SDS+LSSDQ+LRL+N     QSRADSLPRL+S
Sbjct: 61  KDFVPNHNLHRLIQIWSDSLHQRLHSPLSDSSLSSDQLLRLINH----QSRADSLPRLLS 120

Query: 121 FASESVENRRLLCGIDGLLPVLVDLLGNVDGGVLVEQTVRLLHLIRSEIEDKERFVKTML 180
           FASES++NRRLL GIDGLLP+LVDLL NV  G L++Q VRLLHLIR+EI DKERFVKT+L
Sbjct: 121 FASESLDNRRLLSGIDGLLPLLVDLLCNVHAGDLLDQAVRLLHLIRTEIGDKERFVKTIL 180

Query: 181 KMDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQELLKLINSEN 240
             DRN ISSLLL+LRKGTVELKICSANLLEYLAIDAEAKI IAETDGLMQELLKLINS+N
Sbjct: 181 NTDRNSISSLLLILRKGTVELKICSANLLEYLAIDAEAKILIAETDGLMQELLKLINSQN 240

Query: 241 DTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEKVLKVLETA 300
           DTTLIESVLSCLISIS+PKRIKIKL+QLGVIKSVTKLLSESNSSSS SMTEK+LKVLETA
Sbjct: 241 DTTLIESVLSCLISISMPKRIKIKLVQLGVIKSVTKLLSESNSSSSSSMTEKLLKVLETA 300

Query: 301 STVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEALTKANG 360
           STVREGRTEIGEDSVCVAAIVQKVLKVSN ATEHAVTTLWSVCYLFRDEKA EALTKANG
Sbjct: 301 STVREGRTEIGEDSVCVAAIVQKVLKVSNAATEHAVTTLWSVCYLFRDEKAGEALTKANG 360

Query: 361 LTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 409
           LTKILLLMQSNCS PVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC
Sbjct: 361 LTKILLLMQSNCSPPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 404

[Close]
BLAST of Cla008448 vs. TrEMBL
Match: F6I0G9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g00870 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.4e-134
Identity = 251/413 (60.77%), Postives = 329/413 (79.66%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVRD+L IT+PS FRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVL +
Sbjct: 1   MVRDNLFITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHS 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSPVSD----SALSSDQVLRLVNRMEDD-QSRADSL 120
           K+FVPNH L RLIQIWS+S+  R +SP S      +LS DQ   L+  +E   +   + +
Sbjct: 61  KDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLECM 120

Query: 121 PRLVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGGVL-VEQTVRLLHLIRSEIEDKER 180
            +++ FA ES E+R+ L  IDG + +LVD LG+ +   L +EQ VR+L +I SE ED ++
Sbjct: 121 SKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVRVLDMIISEHEDHKQ 180

Query: 181 FVKTMLKMDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQELLK 240
              +MLK DR+C+SS+LL+L++G+ E +I SA +LE +AIDAE+K+ IAE DGL  EL++
Sbjct: 181 LANSMLKSDRDCLSSILLVLQQGSAESRIASARVLESIAIDAESKLLIAEKDGLFSELIR 240

Query: 241 LINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEKVL 300
           ++++E D T+IES LSCLI++S+P+RI+ K+++LGV+K +TKLLS+ N   S+S+TEK L
Sbjct: 241 IMSTETDPTMIESTLSCLIAVSMPRRIRPKIVRLGVVKQLTKLLSDPNW--SVSVTEKAL 300

Query: 301 KVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEA 360
           K+LE AS+ +EG++EI E+S CV+AIVQK+LKVS+TATEHAVT LWSVCYL RD++A   
Sbjct: 301 KLLEMASSCKEGKSEICENSDCVSAIVQKMLKVSSTATEHAVTILWSVCYLSRDDRAQST 360

Query: 361 LTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
           +T+ NGLTKIL+LMQSNCS  VRQ+A DLLKIFR++SKSCLSSYDTKTTHIMP
Sbjct: 361 VTQNNGLTKILVLMQSNCSPAVRQLAGDLLKIFRVSSKSCLSSYDTKTTHIMP 411

[Close]
BLAST of Cla008448 vs. TrEMBL
Match: A0A0B2RP95_GLYSO (U-box domain-containing protein 27 OS=Glycine soja GN=glysoja_030512 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 9.3e-134
Identity = 259/419 (61.81%), Postives = 320/419 (76.37%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVRDDLCIT+PS FRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVLQT
Sbjct: 1   MVRDDLCITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSPVS------DSALSSDQVLRLVNRMEDD-QSRAD 120
           ++FVPN  L RLIQIWSDS+  R+ SP S      +S LS DQ+L  ++ ++    +R D
Sbjct: 61  RDFVPNRTLQRLIQIWSDSVTLRVDSPESPTSTQSESVLSKDQILVAISELQTHCANRFD 120

Query: 121 SLPRLVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGGV-LVEQTVRLLHLIRSEIEDK 180
           SL ++  FA +S EN   L   +  +P LV  L NV+ GV  +EQ V  L L+ S++ED 
Sbjct: 121 SLAKIARFAQDSEENLDFLVRTECFVPALVGFLDNVNDGVEFLEQVVTALDLVVSKMEDC 180

Query: 181 ERFVKTMLKM----DRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGL 240
           E     +LK     ++  + SLLLLL++G+  +KI SA +L+ LA+DAE+K+ +AE DGL
Sbjct: 181 EGLKNLILKRQGGGEKQSVDSLLLLLQQGSHVIKIASARVLKSLAVDAESKLLLAEKDGL 240

Query: 241 MQELLKLINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSIS 300
           + ELL LI  E D  L+E+ LSCL+S+S P+R K+KL++LG +K  + LLS    S S+S
Sbjct: 241 LSELLNLITPEKDPDLMENCLSCLVSLSTPRRSKMKLVRLGAVKVFSNLLS--TPSLSVS 300

Query: 301 MTEKVLKVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRD 360
           +TEKVLK++ET S+ +EGR+EI EDS CV+AIV KVLKVS+ ATEHAVTTLWSVCYLFRD
Sbjct: 301 VTEKVLKLVETVSSTKEGRSEICEDSACVSAIVNKVLKVSSVATEHAVTTLWSVCYLFRD 360

Query: 361 EKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
           +KA EA+TKANGLTKILLLMQSNCS  VRQM+ DLLKIFR+NSKSCLSSYDTKTTHIMP
Sbjct: 361 QKAQEAVTKANGLTKILLLMQSNCSPQVRQMSSDLLKIFRVNSKSCLSSYDTKTTHIMP 417

[Close]
BLAST of Cla008448 vs. TrEMBL
Match: I1K4X0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G189600 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 9.3e-134
Identity = 259/419 (61.81%), Postives = 320/419 (76.37%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVRDDLCIT+PS FRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVLQT
Sbjct: 1   MVRDDLCITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSPVS------DSALSSDQVLRLVNRMEDD-QSRAD 120
           ++FVPN  L RLIQIWSDS+  R+ SP S      +S LS DQ+L  ++ ++    +R D
Sbjct: 61  RDFVPNRTLQRLIQIWSDSVTLRVDSPESPTSTQSESVLSKDQILVAISELQTHCANRFD 120

Query: 121 SLPRLVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGGV-LVEQTVRLLHLIRSEIEDK 180
           SL ++  FA +S EN   L   +  +P LV  L NV+ GV  +EQ V  L L+ S++ED 
Sbjct: 121 SLAKIARFAQDSEENLDFLVRTECFVPALVGFLDNVNDGVEFLEQVVTALDLVVSKMEDC 180

Query: 181 ERFVKTMLKM----DRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGL 240
           E     +LK     ++  + SLLLLL++G+  +KI SA +L+ LA+DAE+K+ +AE DGL
Sbjct: 181 EGLKNLILKRQGGGEKQSVDSLLLLLQQGSHVIKIASARVLKSLAVDAESKLLLAEKDGL 240

Query: 241 MQELLKLINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSIS 300
           + ELL LI  E D  L+E+ LSCL+S+S P+R K+KL++LG +K  + LLS    S S+S
Sbjct: 241 LSELLNLITPEKDPDLMENCLSCLVSLSTPRRSKMKLVRLGAVKVFSNLLS--TPSLSVS 300

Query: 301 MTEKVLKVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRD 360
           +TEKVLK++ET S+ +EGR+EI EDS CV+AIV KVLKVS+ ATEHAVTTLWSVCYLFRD
Sbjct: 301 VTEKVLKLVETVSSTKEGRSEICEDSACVSAIVNKVLKVSSVATEHAVTTLWSVCYLFRD 360

Query: 361 EKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
           +KA EA+TKANGLTKILLLMQSNCS  VRQM+ DLLKIFR+NSKSCLSSYDTKTTHIMP
Sbjct: 361 QKAQEAVTKANGLTKILLLMQSNCSPQVRQMSSDLLKIFRVNSKSCLSSYDTKTTHIMP 417

[Close]
BLAST of Cla008448 vs. TrEMBL
Match: A0A0B2RAI9_GLYSO (U-box domain-containing protein 27 OS=Glycine soja GN=glysoja_008494 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 6.6e-132
Identity = 256/419 (61.10%), Postives = 317/419 (75.66%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVRDDLCIT+PS FRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVLQT
Sbjct: 1   MVRDDLCITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSP------VSDSALSSDQVLRLVNRMED-DQSRAD 120
            +FVPN  L RLIQIWSDS+  R+ SP       S S LS D +L  ++ +     +R +
Sbjct: 61  TDFVPNRTLQRLIQIWSDSVTDRVDSPDSPTSTESQSLLSKDHILVAISDLHTRSDNRFN 120

Query: 121 SLPRLVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGGV-LVEQTVRLLHLIRSEIEDK 180
           SL ++  FA +S ENR  L   +  +PVLV  L NV+GGV  ++Q V  L L+ S++ED+
Sbjct: 121 SLSKIARFAQDSEENRDFLVRTECFVPVLVGFLDNVNGGVEFLQQVVTALDLVISKMEDR 180

Query: 181 ERFVKTMLKM----DRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGL 240
           E     +LK     ++  + SLLL+L++G+   KI SA +L+ +A+DAE+K+ +AE +GL
Sbjct: 181 EGMKNLILKRQGEGEKQSVDSLLLVLQQGSHASKIASARVLKSVAVDAESKLLLAEKEGL 240

Query: 241 MQELLKLINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSIS 300
           + ELL LI  E D  LIE+ LSCL+SIS P+R K+KL++LG +K  + LLS    S  +S
Sbjct: 241 VSELLNLITPEKDPDLIENCLSCLVSISTPRRSKMKLVRLGAVKVFSNLLSAPGLS--VS 300

Query: 301 MTEKVLKVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRD 360
           + EKVLK++ET S+ +EGR+EI EDS CV+AIV KVLKVS+ ATEHAVTTLWSVCYLFRD
Sbjct: 301 VKEKVLKLVETVSSTKEGRSEICEDSACVSAIVDKVLKVSSVATEHAVTTLWSVCYLFRD 360

Query: 361 EKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
           +KA EA+TKANGLTKILLLMQSNCS  VRQM+ DLLKIFR+NSKSCLSSYDTKTTHIMP
Sbjct: 361 QKAQEAVTKANGLTKILLLMQSNCSPQVRQMSSDLLKIFRVNSKSCLSSYDTKTTHIMP 417

[Close]
BLAST of Cla008448 vs. NCBI nr
Match: gi|659080871|ref|XP_008441024.1| (PREDICTED: U-box domain-containing protein 27 [Cucumis melo])

HSP 1 Score: 739.2 bits (1907), Expect = 3.9e-210
Identity = 380/408 (93.14%), Postives = 393/408 (96.32%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MV+DDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSPVSDSALSSDQVLRLVNRMEDDQSRADSLPRLVS 120
           KEFVPNHNLHRLIQIWSDS HQRLHSPVSDS+LSS Q+LRL+NRM+D +SRADSLPRLVS
Sbjct: 61  KEFVPNHNLHRLIQIWSDSHHQRLHSPVSDSSLSSHQILRLINRMDDHRSRADSLPRLVS 120

Query: 121 FASESVENRRLLCGIDGLLPVLVDLLGNVDGGVLVEQTVRLLHLIRSEIEDKERFVKTML 180
           FASESVENRRLLCGIDGL+PVLVDLL NVD G LV+QTVRLLHLIRSEI DKERFVKTML
Sbjct: 121 FASESVENRRLLCGIDGLVPVLVDLLCNVDAGDLVDQTVRLLHLIRSEIGDKERFVKTML 180

Query: 181 KMDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQELLKLINSEN 240
             DRNCISSLLL+LRKGTVELKICSANLLEYLAIDAEAKI IAETDGLM+ELLKLINSEN
Sbjct: 181 NSDRNCISSLLLILRKGTVELKICSANLLEYLAIDAEAKIVIAETDGLMRELLKLINSEN 240

Query: 241 DTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEKVLKVLETA 300
           DTT+IES LSCLISIS+PKRIKIKL+QLGVIKSVTKLLSESNSSSSISMTEKVLKVLETA
Sbjct: 241 DTTVIESALSCLISISMPKRIKIKLVQLGVIKSVTKLLSESNSSSSISMTEKVLKVLETA 300

Query: 301 STVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEALTKANG 360
           STVREGR EIGEDSVCVAAIVQKVLKVSN ATEHAVTTLWSVCYLFRDEKA EALTKANG
Sbjct: 301 STVREGRKEIGEDSVCVAAIVQKVLKVSNAATEHAVTTLWSVCYLFRDEKAGEALTKANG 360

Query: 361 LTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 409
           LTKILLLMQSNCS PVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC
Sbjct: 361 LTKILLLMQSNCSPPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 408

[Close]
BLAST of Cla008448 vs. NCBI nr
Match: gi|449461885|ref|XP_004148672.1| (PREDICTED: U-box domain-containing protein 27-like [Cucumis sativus])

HSP 1 Score: 712.2 bits (1837), Expect = 5.1e-202
Identity = 368/408 (90.20%), Postives = 388/408 (95.10%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MV+DDLCITIP+DFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT
Sbjct: 1   MVKDDLCITIPTDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSPVSDSALSSDQVLRLVNRMEDDQSRADSLPRLVS 120
           K+FVPNHNLHRLIQIWSDSLHQRLHSP+SDS+LSSDQ+LRL+N     QSRADSLPRL+S
Sbjct: 61  KDFVPNHNLHRLIQIWSDSLHQRLHSPLSDSSLSSDQLLRLINH----QSRADSLPRLLS 120

Query: 121 FASESVENRRLLCGIDGLLPVLVDLLGNVDGGVLVEQTVRLLHLIRSEIEDKERFVKTML 180
           FASES++NRRLL GIDGLLP+LVDLL NV  G L++Q VRLLHLIR+EI DKERFVKT+L
Sbjct: 121 FASESLDNRRLLSGIDGLLPLLVDLLCNVHAGDLLDQAVRLLHLIRTEIGDKERFVKTIL 180

Query: 181 KMDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQELLKLINSEN 240
             DRN ISSLLL+LRKGTVELKICSANLLEYLAIDAEAKI IAETDGLMQELLKLINS+N
Sbjct: 181 NTDRNSISSLLLILRKGTVELKICSANLLEYLAIDAEAKILIAETDGLMQELLKLINSQN 240

Query: 241 DTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEKVLKVLETA 300
           DTTLIESVLSCLISIS+PKRIKIKL+QLGVIKSVTKLLSESNSSSS SMTEK+LKVLETA
Sbjct: 241 DTTLIESVLSCLISISMPKRIKIKLVQLGVIKSVTKLLSESNSSSSSSMTEKLLKVLETA 300

Query: 301 STVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEALTKANG 360
           STVREGRTEIGEDSVCVAAIVQKVLKVSN ATEHAVTTLWSVCYLFRDEKA EALTKANG
Sbjct: 301 STVREGRTEIGEDSVCVAAIVQKVLKVSNAATEHAVTTLWSVCYLFRDEKAGEALTKANG 360

Query: 361 LTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 409
           LTKILLLMQSNCS PVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC
Sbjct: 361 LTKILLLMQSNCSPPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMPC 404

[Close]
BLAST of Cla008448 vs. NCBI nr
Match: gi|225431543|ref|XP_002281970.1| (PREDICTED: U-box domain-containing protein 27 [Vitis vinifera])

HSP 1 Score: 486.9 bits (1252), Expect = 3.5e-134
Identity = 251/413 (60.77%), Postives = 329/413 (79.66%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVRD+L IT+PS FRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVL +
Sbjct: 1   MVRDNLFITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHS 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSPVSD----SALSSDQVLRLVNRMEDD-QSRADSL 120
           K+FVPNH L RLIQIWS+S+  R +SP S      +LS DQ   L+  +E   +   + +
Sbjct: 61  KDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLECM 120

Query: 121 PRLVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGGVL-VEQTVRLLHLIRSEIEDKER 180
            +++ FA ES E+R+ L  IDG + +LVD LG+ +   L +EQ VR+L +I SE ED ++
Sbjct: 121 SKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVRVLDMIISEHEDHKQ 180

Query: 181 FVKTMLKMDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQELLK 240
              +MLK DR+C+SS+LL+L++G+ E +I SA +LE +AIDAE+K+ IAE DGL  EL++
Sbjct: 181 LANSMLKSDRDCLSSILLVLQQGSAESRIASARVLESIAIDAESKLLIAEKDGLFSELIR 240

Query: 241 LINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEKVL 300
           ++++E D T+IES LSCLI++S+P+RI+ K+++LGV+K +TKLLS+ N   S+S+TEK L
Sbjct: 241 IMSTETDPTMIESTLSCLIAVSMPRRIRPKIVRLGVVKQLTKLLSDPNW--SVSVTEKAL 300

Query: 301 KVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEA 360
           K+LE AS+ +EG++EI E+S CV+AIVQK+LKVS+TATEHAVT LWSVCYL RD++A   
Sbjct: 301 KLLEMASSCKEGKSEICENSDCVSAIVQKMLKVSSTATEHAVTILWSVCYLSRDDRAQST 360

Query: 361 LTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
           +T+ NGLTKIL+LMQSNCS  VRQ+A DLLKIFR++SKSCLSSYDTKTTHIMP
Sbjct: 361 VTQNNGLTKILVLMQSNCSPAVRQLAGDLLKIFRVSSKSCLSSYDTKTTHIMP 411

[Close]
BLAST of Cla008448 vs. NCBI nr
Match: gi|356512817|ref|XP_003525112.1| (PREDICTED: U-box domain-containing protein 27-like [Glycine max])

HSP 1 Score: 485.0 bits (1247), Expect = 1.3e-133
Identity = 259/419 (61.81%), Postives = 320/419 (76.37%), Query Frame = 1 

Query: 1   MVRDDLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
           MVRDDLCIT+PS FRCPISLDVMKSPVSLCTGVTYDRSSIQ+WLDNGNNTCPATMQVLQT
Sbjct: 1   MVRDDLCITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLQT 60

Query: 61  KEFVPNHNLHRLIQIWSDSLHQRLHSPVS------DSALSSDQVLRLVNRMEDD-QSRAD 120
           ++FVPN  L RLIQIWSDS+  R+ SP S      +S LS DQ+L  ++ ++    +R D
Sbjct: 61  RDFVPNRTLQRLIQIWSDSVTLRVDSPESPTSTQSESVLSKDQILVAISELQTHCANRFD 120

Query: 121 SLPRLVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGGV-LVEQTVRLLHLIRSEIEDK 180
           SL ++  FA +S EN   L   +  +P LV  L NV+ GV  +EQ V  L L+ S++ED 
Sbjct: 121 SLAKIARFAQDSEENLDFLVRTECFVPALVGFLDNVNDGVEFLEQVVTALDLVVSKMEDC 180

Query: 181 ERFVKTMLKM----DRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGL 240
           E     +LK     ++  + SLLLLL++G+  +KI SA +L+ LA+DAE+K+ +AE DGL
Sbjct: 181 EGLKNLILKRQGGGEKQSVDSLLLLLQQGSHVIKIASARVLKSLAVDAESKLLLAEKDGL 240

Query: 241 MQELLKLINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSIS 300
           + ELL LI  E D  L+E+ LSCL+S+S P+R K+KL++LG +K  + LLS    S S+S
Sbjct: 241 LSELLNLITPEKDPDLMENCLSCLVSLSTPRRSKMKLVRLGAVKVFSNLLS--TPSLSVS 300

Query: 301 MTEKVLKVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRD 360
           +TEKVLK++ET S+ +EGR+EI EDS CV+AIV KVLKVS+ ATEHAVTTLWSVCYLFRD
Sbjct: 301 VTEKVLKLVETVSSTKEGRSEICEDSACVSAIVNKVLKVSSVATEHAVTTLWSVCYLFRD 360

Query: 361 EKAAEALTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
           +KA EA+TKANGLTKILLLMQSNCS  VRQM+ DLLKIFR+NSKSCLSSYDTKTTHIMP
Sbjct: 361 QKAQEAVTKANGLTKILLLMQSNCSPQVRQMSSDLLKIFRVNSKSCLSSYDTKTTHIMP 417

[Close]
BLAST of Cla008448 vs. NCBI nr
Match: gi|502136960|ref|XP_004502912.1| (PREDICTED: U-box domain-containing protein 27-like [Cicer arietinum])

HSP 1 Score: 482.6 bits (1241), Expect = 6.6e-133
Identity = 247/413 (59.81%), Postives = 321/413 (77.72%), Query Frame = 1 

Query: 1   MVRD---DLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQV 60
           MVR+   DLCIT+P+ F+CPISLDVMKSPVSLCTGVTYDRSSIQ+WLD+GNNTCPATMQ+
Sbjct: 1   MVRERVVDLCITVPTFFKCPISLDVMKSPVSLCTGVTYDRSSIQRWLDDGNNTCPATMQI 60

Query: 61  LQTKEFVPNHNLHRLIQIWSDSLHQRLHSPVSDSALSSDQVLRLVNRMEDDQS-RADSLP 120
           L TK+FVPN  LH LIQIW+DS+H R+  PVS S LS DQ+L+ +N +    S R  S+ 
Sbjct: 61  LHTKDFVPNRTLHSLIQIWTDSVHHRVDPPVSPSVLSKDQILQAINELGSSGSNRFGSIT 120

Query: 121 RLVSFASESVENRRLLCGIDGLLPVLVDLLGNVDGGV-LVEQTVRLLHLIRSEIEDKERF 180
           + V FA +S +NR  L  +DG +P+LV  L NVDG V  +EQ V  L L+  +IED+E  
Sbjct: 121 KTVRFAQDSDQNRAFLAKLDGFVPLLVSFLDNVDGSVEFLEQIVTALGLVLDKIEDREEL 180

Query: 181 VKTMLK-MDRNCISSLLLLLRKGTVELKICSANLLEYLAIDAEAKIRIAETDGLMQELLK 240
              +LK   R C+ S+L++L++G+ + KI +A +L+++++DAE+++ I E + L+ ELL 
Sbjct: 181 KNHVLKGKKRLCLDSMLVVLKRGSTDSKIATARVLKFISLDAESQLLIGENETLITELLN 240

Query: 241 LINSENDTTLIESVLSCLISISIPKRIKIKLIQLGVIKSVTKLLSESNSSSSISMTEKVL 300
           L   E D  LIE+ L+CL++IS PKR K+KL+++GVIK ++KLL+ESN+S  +++ EK L
Sbjct: 241 LATPEKDPKLIENCLACLVAISKPKRNKLKLVKIGVIKKLSKLLTESNTS--VTVVEKAL 300

Query: 301 KVLETASTVREGRTEIGEDSVCVAAIVQKVLKVSNTATEHAVTTLWSVCYLFRDEKAAEA 360
           K++ETAS+  EGR E+ ED+  VAAI+ KVLKVSN ATEHAVTTLWSVCYLFRD+KA EA
Sbjct: 301 KLVETASSTSEGRKEMCEDAAFVAAILNKVLKVSNVATEHAVTTLWSVCYLFRDQKAQEA 360

Query: 361 LTKANGLTKILLLMQSNCSAPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 408
           +T+ANGLTKILL+MQSNCS  VRQM  DLLKIFR+NSKSCLSSY+TKTTHIMP
Sbjct: 361 VTQANGLTKILLMMQSNCSPQVRQMCTDLLKIFRVNSKSCLSSYETKTTHIMP 411

The following BLAST results are available for this feature:
BLAST of Cla008448 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUB27_ARATH9.5e-12454.18U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27 PE=2 SV=1[more]
PUB28_ARATH1.0e-10951.33U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28 PE=1 SV=1[more]
PUB29_ARATH2.1e-9447.34U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29 PE=1 SV=1[more]
PUB23_ARATH2.5e-3927.98E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1[more]
PUB25_ARATH1.5e-3629.40U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1[more]
BLAST of Cla008448 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ12_CUCSA3.6e-20290.20U-box domain-containing protein 27 OS=Cucumis sativus GN=Csa_6G484010 PE=4 SV=1[more]
F6I0G9_VITVI2.4e-13460.77Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g00870 PE=4 SV=... [more]
A0A0B2RP95_GLYSO9.3e-13461.81U-box domain-containing protein 27 OS=Glycine soja GN=glysoja_030512 PE=4 SV=1[more]
I1K4X0_SOYBN9.3e-13461.81Uncharacterized protein OS=Glycine max GN=GLYMA_05G189600 PE=4 SV=1[more]
A0A0B2RAI9_GLYSO6.6e-13261.10U-box domain-containing protein 27 OS=Glycine soja GN=glysoja_008494 PE=4 SV=1[more]
BLAST of Cla008448 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659080871|ref|XP_008441024.1|3.9e-21093.14PREDICTED: U-box domain-containing protein 27 [Cucumis melo][more]
gi|449461885|ref|XP_004148672.1|5.1e-20290.20PREDICTED: U-box domain-containing protein 27-like [Cucumis sativus][more]
gi|225431543|ref|XP_002281970.1|3.5e-13460.77PREDICTED: U-box domain-containing protein 27 [Vitis vinifera][more]
gi|356512817|ref|XP_003525112.1|1.3e-13361.81PREDICTED: U-box domain-containing protein 27-like [Glycine max][more]
gi|502136960|ref|XP_004502912.1|6.6e-13359.81PREDICTED: U-box domain-containing protein 27-like [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR011989ARM-like
IPR013083Znf_RING/FYVE/PHD
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
molecular_function GO:0005488 binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla008448Cla008448.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainPFAMPF04564U-boxcoord: 10..77
score: 2.4
IPR003613U box domainSMARTSM00504Ubox_2coord: 13..76
score: 3.2
IPR003613U box domainPROFILEPS51698U_BOXcoord: 9..83
score: 34
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 65..390
score: 3.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 10..64
score: 2.8
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 162..394
score: 4.53
NoneNo IPR availablePANTHERPTHR22849WDSAM1 PROTEINcoord: 1..407
score: 1.4E
NoneNo IPR availablePANTHERPTHR22849:SF20SUBFAMILY NOT NAMEDcoord: 1..407
score: 1.4E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 6..78
score: 7.51

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla008448Cla97C01G014510Watermelon (97103) v2wmwmbB244
Cla008448Cla97C02G026900Watermelon (97103) v2wmwmbB259
Cla008448Csa6G484010Cucumber (Chinese Long) v2cuwmB502
Cla008448Csa2G302090Cucumber (Chinese Long) v2cuwmB133
Cla008448MELO3C008040Melon (DHL92) v3.5.1mewmB571
Cla008448ClCG02G000630Watermelon (Charleston Gray)wcgwmB193
Cla008448ClCG01G015580Watermelon (Charleston Gray)wcgwmB153
Cla008448CSPI02G15590Wild cucumber (PI 183967)cpiwmB136
Cla008448CSPI06G26630Wild cucumber (PI 183967)cpiwmB521
Cla008448Cucsa.250000Cucumber (Gy14) v1cgywmB469
Cla008448Cucsa.101080Cucumber (Gy14) v1cgywmB137
Cla008448CmaCh07G007890Cucurbita maxima (Rimu)cmawmB824
Cla008448CmaCh03G010830Cucurbita maxima (Rimu)cmawmB629
Cla008448CmoCh07G008120Cucurbita moschata (Rifu)cmowmB814
Cla008448Lsi10G007130Bottle gourd (USVL1VR-Ls)lsiwmB060
Cla008448Lsi01G011360Bottle gourd (USVL1VR-Ls)lsiwmB142
Cla008448Cp4.1LG10g03430Cucurbita pepo (Zucchini)cpewmB075
Cla008448Cp4.1LG19g11940Cucurbita pepo (Zucchini)cpewmB483
Cla008448CsGy2G015560Cucumber (Gy14) v2cgybwmB127
Cla008448CsGy6G026060Cucumber (Gy14) v2cgybwmB469
Cla008448MELO3C008040.2Melon (DHL92) v3.6.1medwmB560
Cla008448Carg05297Silver-seed gourdcarwmB0803
Cla008448Carg10548Silver-seed gourdcarwmB0226
Cla008448CsaV3_6G041810Cucumber (Chinese Long) v3cucwmB527
Cla008448Bhi03G001059Wax gourdwgowmB433
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla008448Cla007797Watermelon (97103) v1wmwmB145
The following block(s) are covering this gene:
GeneOrganismBlock
Cla008448Cucurbita maxima (Rimu)cmawmB580
Cla008448Cucurbita moschata (Rifu)cmowmB574
Cla008448Cucurbita moschata (Rifu)cmowmB620
Cla008448Cucurbita pepo (Zucchini)cpewmB715