Cla007797 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007797
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	U-box domain-containing protein (AHRD V1 ***- D7MRW3_ARALL); contains Interpro domain(s) IPR011989 Armadillo-like helical
Location	Chr2 : 1433765 .. 1435000 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAGGCCGCACAATCTCTTCATCACTGTTCCCACTCACTTCTGTTGCCCAATATCTCTCGACCTCATGCAATCTCCCGTCAGTTTGACCACCGGTGTCACCTACGACCGCTCCAGCATCCAGCGCTGGCTCGACTCCGGCCATAATACTTGCCCCGCCACCATGCAGATCCTCCACAACTACGACTTCGTTCCCAATTCTAATCTCAAGCGACTCATTCAGATTTGGTCCGATTCCCTCCAATTCCCCCTCTCTACACTCTCCCAATCGGATCATATTCTTACCGCTGTCGATGATTTGCGCACAAACGGAAATGGCTCTGTTTCAGTTTCTGTTTCTGTCTCTGCTTCTCTATCCAAGCTACTCTGTTTCGGTGCACGATTGGAGCAGAACGTCAAGTTTCTCGGGAGGATTCACGGCTTTGTACCGGTGCTTCTCGATGTTCTTCGTTGTAGAGATGTTGATTGTTCGGAACTGGTGGTTAGGGTTTTGGATTTGGTGAGATGCGAAATTGAGGATCGGGAGGAGTTTATGAACATGATGTTGAAAAGCGATCGCGATTGTTTGAGATCTCTGGTTCTCGTTCTACAGCGAGGAAGTTCGGAATCGCGAATTGGAACAGCGAGGCTTCTCGAGTGCGTCGCCATTAACGCTGAATCAAAGAACTTAATTGCCGAAAACGAAGCTATTCTACACGAATTGATTGGAGTAATCGGAATAGACGAAGATCCGAAACTAATAGAATCGGTGCTCTCGTGCTTAATCGCAATATCAATGCCGAAACGAGTGAAAATCAAACTCGTTCGATTAGGAGTAATAAAAGCCCTAACCAGACTGCTGAAGCACCGGAACGCAAGCGTGGGAGTAACGGAGAAGGTTCTGAGGCTATTAGCGGCGGCGGCGGCGGTAGAGGAAGGGCGGTCGGAGATGTTGGAGAACGGAGGAGAATGCGTGGGGGGCATGGTGAAGAAAGTGATGAAGGTGTCGAGTGCGGCGACGGAGCAGGCGGTGACGGCGCTGTGGTGCATATGCTATTTGTTCCGGGAAGAGAGGGCGGCGGAGGCGGTGGCGGAGGCGAAAGGGGTTGAGAAGATACTGTTGTTGATGCAGAGCCATTGTCCGGCGACGGTCAGGCAAATGGCCAAAGATCTTCTAAAGATTTTGAAGGTTAATTCCATCTCCTCTTGCTTATCAATTTATGATACTAACAATTCTTACATTATGCCCTTTTGA

mRNA sequence

ATGGTCAGGCCGCACAATCTCTTCATCACTGTTCCCACTCACTTCTGTTGCCCAATATCTCTCGACCTCATGCAATCTCCCGTCAGTTTGACCACCGGTGTCACCTACGACCGCTCCAGCATCCAGCGCTGGCTCGACTCCGGCCATAATACTTGCCCCGCCACCATGCAGATCCTCCACAACTACGACTTCGTTCCCAATTCTAATCTCAAGCGACTCATTCAGATTTGGTCCGATTCCCTCCAATTCCCCCTCTCTACACTCTCCCAATCGGATCATATTCTTACCGCTGTCGATGATTTGCGCACAAACGGAAATGGCTCTGTTTCAGTTTCTGTTTCTGTCTCTGCTTCTCTATCCAAGCTACTCTGTTTCGGTGCACGATTGGAGCAGAACGTCAAGTTTCTCGGGAGGATTCACGGCTTTGTACCGGTGCTTCTCGATGTTCTTCGTTGTAGAGATGTTGATTGTTCGGAACTGGTGGTTAGGGTTTTGGATTTGGTGAGATGCGAAATTGAGGATCGGGAGGAGTTTATGAACATGATGTTGAAAAGCGATCGCGATTGTTTGAGATCTCTGGTTCTCGTTCTACAGCGAGGAAGTTCGGAATCGCGAATTGGAACAGCGAGGCTTCTCGAGTGCGTCGCCATTAACGCTGAATCAAAGAACTTAATTGCCGAAAACGAAGCTATTCTACACGAATTGATTGGAGTAATCGGAATAGACGAAGATCCGAAACTAATAGAATCGGTGCTCTCGTGCTTAATCGCAATATCAATGCCGAAACGAGTGAAAATCAAACTCGTTCGATTAGGAGTAATAAAAGCCCTAACCAGACTGCTGAAGCACCGGAACGCAAGCGTGGGAGTAACGGAGAAGGTTCTGAGGCTATTAGCGGCGGCGGCGGCGGTAGAGGAAGGGCGGTCGGAGATGTTGGAGAACGGAGGAGAATGCGTGGGGGGCATGGTGAAGAAAGTGATGAAGGTGTCGAGTGCGGCGACGGAGCAGGCGGTGACGGCGCTGTGGTGCATATGCTATTTGTTCCGGGAAGAGAGGGCGGCGGAGGCGGTGGCGGAGGCGAAAGGGGTTGAGAAGATACTGTTGTTGATGCAGAGCCATTGTCCGGCGACGGTCAGGCAAATGGCCAAAGATCTTCTAAAGATTTTGAAGGTTAATTCCATCTCCTCTTGCTTATCAATTTATGATACTAACAATTCTTACATTATGCCCTTTTGA

Coding sequence (CDS)

ATGGTCAGGCCGCACAATCTCTTCATCACTGTTCCCACTCACTTCTGTTGCCCAATATCTCTCGACCTCATGCAATCTCCCGTCAGTTTGACCACCGGTGTCACCTACGACCGCTCCAGCATCCAGCGCTGGCTCGACTCCGGCCATAATACTTGCCCCGCCACCATGCAGATCCTCCACAACTACGACTTCGTTCCCAATTCTAATCTCAAGCGACTCATTCAGATTTGGTCCGATTCCCTCCAATTCCCCCTCTCTACACTCTCCCAATCGGATCATATTCTTACCGCTGTCGATGATTTGCGCACAAACGGAAATGGCTCTGTTTCAGTTTCTGTTTCTGTCTCTGCTTCTCTATCCAAGCTACTCTGTTTCGGTGCACGATTGGAGCAGAACGTCAAGTTTCTCGGGAGGATTCACGGCTTTGTACCGGTGCTTCTCGATGTTCTTCGTTGTAGAGATGTTGATTGTTCGGAACTGGTGGTTAGGGTTTTGGATTTGGTGAGATGCGAAATTGAGGATCGGGAGGAGTTTATGAACATGATGTTGAAAAGCGATCGCGATTGTTTGAGATCTCTGGTTCTCGTTCTACAGCGAGGAAGTTCGGAATCGCGAATTGGAACAGCGAGGCTTCTCGAGTGCGTCGCCATTAACGCTGAATCAAAGAACTTAATTGCCGAAAACGAAGCTATTCTACACGAATTGATTGGAGTAATCGGAATAGACGAAGATCCGAAACTAATAGAATCGGTGCTCTCGTGCTTAATCGCAATATCAATGCCGAAACGAGTGAAAATCAAACTCGTTCGATTAGGAGTAATAAAAGCCCTAACCAGACTGCTGAAGCACCGGAACGCAAGCGTGGGAGTAACGGAGAAGGTTCTGAGGCTATTAGCGGCGGCGGCGGCGGTAGAGGAAGGGCGGTCGGAGATGTTGGAGAACGGAGGAGAATGCGTGGGGGGCATGGTGAAGAAAGTGATGAAGGTGTCGAGTGCGGCGACGGAGCAGGCGGTGACGGCGCTGTGGTGCATATGCTATTTGTTCCGGGAAGAGAGGGCGGCGGAGGCGGTGGCGGAGGCGAAAGGGGTTGAGAAGATACTGTTGTTGATGCAGAGCCATTGTCCGGCGACGGTCAGGCAAATGGCCAAAGATCTTCTAAAGATTTTGAAGGTTAATTCCATCTCCTCTTGCTTATCAATTTATGATACTAACAATTCTTACATTATGCCCTTTTGA

Protein sequence

MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILHNYDFVPNSNLKRLIQIWSDSLQFPLSTLSQSDHILTAVDDLRTNGNGSVSVSVSVSASLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDREEFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEAILHELIGVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNASVGVTEKVLRLLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLFREERAAEAVAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSCLSIYDTNNSYIMPF

Homology

[Close]

BLAST of Cla007797 vs. Swiss-Prot
Match: PUB27_ARATH (U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27 PE=2 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.1e-98
Identity = 208/426 (48.83%), Postives = 274/426 (64.32%), Query Frame = 1


Query: 2   VRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILHN 61
           +R  +L ITVPT F CPISLD+M+SPVSL TGVTYDR+SIQRWLD G+NTCPATMQIL N
Sbjct: 1   MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60

Query: 62  YDFVPNSNLKRLIQIWSDSLQFPLSTLSQS------DHILTAVDDLRTNGNGSVSVSVSV 121
            DF+PN  L+RLI+IWSDS++      S        D I  A+D ++          V  
Sbjct: 61  KDFIPNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREV-- 120

Query: 122 SASLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVDCS--------ELVVRVLDL 181
              LSK++ FG   + N  FL     FV +L+D++   D + +        +  V++L  
Sbjct: 121 ---LSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILST 180

Query: 182 VRCEIEDREEFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAE 241
           +R ++ DR  F N++L + RD L  +V + + G+ E +I  A LLE +A++AESK LIAE
Sbjct: 181 IRSKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAE 240

Query: 242 NEAILHELIGVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNA- 301
            + ++ EL+  I  D D  LIES LSCLIAIS PKRVK+ L+R  +I  +T+LL    + 
Sbjct: 241 RDGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSS 300

Query: 302 -SVGVTEKVLRLLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCIC 361
            SV VTEK L+LL   A+ +EGRSE+    GEC+  +VKK+MKVS+AATE AVT LW + 
Sbjct: 301 LSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVS 360

Query: 362 YLFREERAAEAVAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSCLSIYDTNN 412
           YLF+E++A EAV    GV KILLL+QS+C   VR+M  DLLK+ KVNS  SCLS YDT  
Sbjct: 361 YLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVNS-RSCLSAYDTKT 420

[Close]

BLAST of Cla007797 vs. Swiss-Prot
Match: PUB28_ARATH (U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28 PE=1 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 2.1e-94
Identity = 200/423 (47.28%), Postives = 274/423 (64.78%), Query Frame = 1


Query: 2   VRPHNLFIT-VPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 61
           +R  +L+IT VP  F CPISLD+M+SPVSL+TGVTYDR SIQRWLD G+NTCPATMQIL 
Sbjct: 1   MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQ 60

Query: 62  NYDFVPNSNLKRLIQIWSDSL------QFPLSTLSQSDHILTAVDDLRTNGNGSVSVSVS 121
           N +FVPN  L RLI  WSDS+      + P S     D I  A++  R   +        
Sbjct: 61  NKEFVPNLTLHRLIDHWSDSINRRADSESPESDTPTRDEINAAIERFRIENDAR------ 120

Query: 122 VSASLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLR-CRDVDCSELV-----VRVLDLV 181
                SK+L F    ++N +FL     FV +L+D++   R+   S+L+     V++L ++
Sbjct: 121 -----SKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMI 180

Query: 182 RCEIEDREEFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAEN 241
           R +I DR    N++L +  DCL S  L+++RG+ + +I  + +LE +A++AESK +IA+ 
Sbjct: 181 RRKIFDRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKG 240

Query: 242 EAILHELIGVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNASV 301
           E ++ E+I +I  D D  LIE+ LS LIAI+  KRVK+ L+R  ++  LT LL     SV
Sbjct: 241 EGLVTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSV 300

Query: 302 GVTEKVLRLLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLF 361
            VTEK L+LL A ++ +EGRSE+ +  G CV  +V K+MKVS+AATE AVT LW +CYLF
Sbjct: 301 SVTEKCLKLLEAISSCKEGRSEICD--GVCVETVVNKLMKVSTAATEHAVTVLWSVCYLF 360

Query: 362 REERAAEAVAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSCLSIYDTNNSYI 412
           +E++A +AV    GV KILLL+QS+C  TVR M  DLLK+ KVNS  SCLS+Y+T  ++I
Sbjct: 361 KEKKAQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNS-RSCLSVYETKTTHI 409

[Close]

BLAST of Cla007797 vs. Swiss-Prot
Match: PUB29_ARATH (U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29 PE=1 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.3e-88
Identity = 192/418 (45.93%), Postives = 272/418 (65.07%), Query Frame = 1


Query: 8   FITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILHNYDFVPN 67
           +ITVP+ F CPISLD+M+SPVSL TGVTYDR+SIQRWLD G+NTCPATMQ+L   DFVPN
Sbjct: 9   YITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPN 68

Query: 68  SNLKRLIQIWSDSLQFPLSTLSQSDHILTAVDDLRTNGNGSVSVSVSVSASLS---KLLC 127
             L+RLI IWSDS+       +    +L             V+V +    SL    K++ 
Sbjct: 69  LTLQRLINIWSDSIG---RRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVR 128

Query: 128 FGARLEQNVKFLGRIHGFVPVLLDVLRCR--DVDCSELVVRVLDLVRCEIEDREEFMNMM 187
           F    + N +FL +   FVP+L+D++R +   ++   + +R+LD ++    DRE   N+M
Sbjct: 129 FVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKV---DRERLSNLM 188

Query: 188 LKSD-RDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEAILHELIGVIGI 247
           L +D  DCL +++L +QRG+ ES+I + R+L+ ++ +A+SK +IAE + +L E++  I I
Sbjct: 189 LANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSISI 248

Query: 248 DE--DPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTR----LLKHRNASVGVTEKVL 307
            E  DP LIE+ LS LI IS  KRV+ KL+     KA+T+    LL     +V VTEK L
Sbjct: 249 TESSDPSLIEASLSFLITISKSKRVRSKLI---AAKAITKIKDILLTETLTNVAVTEKSL 308

Query: 308 RLLAAAAAVEEGRSEML-ENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLFREERAA 367
           +LL   ++  EGR E+  ++ G CV G+VKK++KVS+ ATE AVT LWC+CY+FRE++  
Sbjct: 309 KLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDKTV 368

Query: 368 EAVAE-AKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSCLSIYDTNNSYIMPF 412
           E   E + GV K+L+++QS+C A VRQMAKDL+K+LK N  SS L+ Y+T  ++IMPF
Sbjct: 369 EETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFN--SSALAAYETKTTHIMPF 415

[Close]

BLAST of Cla007797 vs. Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.9e-32
Identity = 125/406 (30.79%), Postives = 202/406 (49.75%), Query Frame = 1


Query: 2   VRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHN-TCPATMQILH 61
           + P +L I +P HF CPISL+LMQ PV++ TG TYDR+SI+ W+  G+N TCP T   L 
Sbjct: 5   IEPLDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLS 64

Query: 62  NYDFVPNSNLKRLIQIW-----SDSLQFPLSTLSQSDHILTAVDDLRTNGNGSVSVSVSV 121
           ++  +PN  L+RLIQ W     S+ ++   +    +D   T+V  L +  +      VSV
Sbjct: 65  DFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADP--TSVRALLSQASAITGTHVSV 124

Query: 122 ---SASLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVDCSELVVRVLD-LVRCE 181
              +A+L +L  F    ++N + L   H    +L+ +L   +   SELV   L  LV   
Sbjct: 125 RSRAAALRRLRGFARDSDKN-RVLIAAHNATEILIKIL-FSETTSSELVSESLALLVMLP 184

Query: 182 IEDREEFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNL---IAEN 241
           I +  +F++  + SD   +  L  +L   S E+R+  A L+E V+   +S +L   I+ +
Sbjct: 185 ITEPNQFVS--ISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNS 244

Query: 242 EAILHELIGVIGIDEDP----KLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHR 301
           E++     GV+ +  +P    + ++  +  L A+   K  +   +  G  + L   L   
Sbjct: 245 ESVFE---GVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLA-A 304

Query: 302 NASVGVTEKVLRLLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCI 361
           +     TE+ L  +       EG +   E+    V  +VK +++VS  ATE A  AL  +
Sbjct: 305 DFDRCDTERALATVELLCRTPEGCAAFGEH-ALTVPLLVKTILRVSDRATEYAAGALLAL 364

Query: 362 CYLFREERAAEAVAEAKGVEKILLLMQSHCPATVRQMAKDLLKILK 391
           C    EER  E  A A  V ++LL++QS C    ++ A+ LLK+L+
Sbjct: 365 C--TAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLR 397

[Close]

BLAST of Cla007797 vs. Swiss-Prot
Match: PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.3e-31
Identity = 110/404 (27.23%), Postives = 189/404 (46.78%), Query Frame = 1


Query: 9   ITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSG-HNTCPATMQILHNYDFVPN 68
           I +P  F CPISL++M+ PV ++TG+TYDR SI++WL +G  N+CP T Q + + D  PN
Sbjct: 10  IEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPN 69

Query: 69  SNLKRLIQIWS--------DSLQFPLSTLSQSDHILTAVDDLRTNGNGSVSVSVSVSASL 128
             L+RLIQ W         + +  P   + +S+     ++ L  +   S    V     L
Sbjct: 70  HTLRRLIQSWCTLNASYGVERIPTPRPPICKSE-----IEKLIRDSASSHENQVKCLKRL 129

Query: 129 SKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDREEFM 188
            +++   A  ++ ++  G     VP  L  +   D +   L    L+L+   +E  E  +
Sbjct: 130 RQIVSENATNKRCLEAAG-----VPEFLANIVSNDSENGSLTDEALNLL-YHLETSETVL 189

Query: 189 NMML--KSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEAILHELIG 248
             +L  K D + ++SL  ++QRG  ESR+    LL+ +   A+    +     +  E++ 
Sbjct: 190 KNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQ 249

Query: 249 VIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRN--ASVGVTEKVL 308
           ++      K  ++ +  L+ I    R + K V  GVI  +  LL   +  +     E  +
Sbjct: 250 ILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAM 309

Query: 309 RLLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLFREERAAE 368
            +L       EGR+E L N G  +  + KK+++VS  A+++AV  L  +           
Sbjct: 310 VVLDLLCQCAEGRAEFL-NHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLH 369

Query: 369 AVAEAKGVEKILLLMQSHCPATVRQMAKDLLKI-LKVNSISSCL 399
            + +   V K+ L++Q  C    ++ AK+LLK+  +V   S CL
Sbjct: 370 EMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCL 401

[Close]

BLAST of Cla007797 vs. TrEMBL
Match: A0A0A0LMY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302090 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 2.3e-185
Identity = 341/390 (87.44%), Postives = 354/390 (90.77%), Query Frame = 1


Query: 1   MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 60
           MV+PHNLFIT+PTHF CPISLDLMQSPVSL TGVTYDRSSIQRWLDSGHNTCPATMQ+L 
Sbjct: 1   MVKPHNLFITIPTHFLCPISLDLMQSPVSLITGVTYDRSSIQRWLDSGHNTCPATMQVLT 60

Query: 61  NYDFVPNSNLKRLIQIWSDSLQFPLSTLSQSDHILTAVDDLRTNGNGSVSVSVSVSASLS 120
           NYDFVPNSNLKRLIQIWSDSL+         DHILT VD LRTNGN SVS        LS
Sbjct: 61  NYDFVPNSNLKRLIQIWSDSLEL--------DHILTVVDGLRTNGNASVS--------LS 120

Query: 121 KLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDREEFMN 180
           +LLCFG+RLE+NVKFLGRI GFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDR EFMN
Sbjct: 121 ELLCFGSRLEKNVKFLGRIRGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDRVEFMN 180

Query: 181 MMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEAILHELIGVIG 240
           +MLKSDRDCLRSLVLVLQRGSSESRIGT RLLEC+AINAESKNLIAENE ILHELI VIG
Sbjct: 181 LMLKSDRDCLRSLVLVLQRGSSESRIGTVRLLECIAINAESKNLIAENEGILHELIEVIG 240

Query: 241 IDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNASVGVTEKVLRLLAA 300
           IDEDPKLIESVLSCLI ISMPKRVKIKLVRLGVIKALTRLLKH+NASVGVTEKVLRLLAA
Sbjct: 241 IDEDPKLIESVLSCLIPISMPKRVKIKLVRLGVIKALTRLLKHQNASVGVTEKVLRLLAA 300

Query: 301 AAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLFREERAAEAVAEA 360
           AAAVEEGR EM+ENGGECVG MV+KVMKVSSAATEQAVTALWCICYL+REERAA A AEA
Sbjct: 301 AAAVEEGRWEMMENGGECVGRMVRKVMKVSSAATEQAVTALWCICYLYREERAAVAAAEA 360

Query: 361 KGVEKILLLMQSHCPATVRQMAKDLLKILK 391
           KGVEKILLLMQSHCPATVR MAKDLLK  K
Sbjct: 361 KGVEKILLLMQSHCPATVRAMAKDLLKTFK 374

[Close]

BLAST of Cla007797 vs. TrEMBL
Match: F6I0G9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g00870 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.2e-114
Identity = 227/415 (54.70%), Postives = 301/415 (72.53%), Query Frame = 1


Query: 1   MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 60
           MVR  NLFITVP+ F CPISLD+M+SPVSL TGVTYDRSSIQRWLD+G+NTCPATMQ+LH
Sbjct: 1   MVRD-NLFITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLH 60

Query: 61  NYDFVPNSNLKRLIQIWSDSLQFPLSTLSQSDHILTAV--DDLRTNGNGSVSVSVSVSAS 120
           + DFVPN  L+RLIQIWS+S++   ++      ++ ++  D  R       S        
Sbjct: 61  SKDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLEC 120

Query: 121 LSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVD--CSELVVRVLDLVRCEIEDRE 180
           +SK++CF    E++ KFL RI GFV +L+D L   + +    E VVRVLD++  E ED +
Sbjct: 121 MSKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVRVLDMIISEHEDHK 180

Query: 181 EFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEAILHELI 240
           +  N MLKSDRDCL S++LVLQ+GS+ESRI +AR+LE +AI+AESK LIAE + +  ELI
Sbjct: 181 QLANSMLKSDRDCLSSILLVLQQGSAESRIASARVLESIAIDAESKLLIAEKDGLFSELI 240

Query: 241 GVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNASVGVTEKVLR 300
            ++  + DP +IES LSCLIA+SMP+R++ K+VRLGV+K LT+LL   N SV VTEK L+
Sbjct: 241 RIMSTETDPTMIESTLSCLIAVSMPRRIRPKIVRLGVVKQLTKLLSDPNWSVSVTEKALK 300

Query: 301 LLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLFREERAAEA 360
           LL  A++ +EG+SE+ EN  +CV  +V+K++KVSS ATE AVT LW +CYL R++RA   
Sbjct: 301 LLEMASSCKEGKSEICEN-SDCVSAIVQKMLKVSSTATEHAVTILWSVCYLSRDDRAQST 360

Query: 361 VAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSCLSIYDTNNSYIMPF 412
           V +  G+ KIL+LMQS+C   VRQ+A DLLKI +V+S  SCLS YDT  ++IMPF
Sbjct: 361 VTQNNGLTKILVLMQSNCSPAVRQLAGDLLKIFRVSS-KSCLSSYDTKTTHIMPF 412

[Close]

BLAST of Cla007797 vs. TrEMBL
Match: W9QLX1_9ROSA (U-box domain-containing protein 28 OS=Morus notabilis GN=L484_020739 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.9e-108
Identity = 225/428 (52.57%), Postives = 295/428 (68.93%), Query Frame = 1


Query: 1   MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 60
           MVR  +L+ITVP+ F CPISLD+M+SPVSL TGVTYDRSSIQRWLD G+NTCPATMQ+LH
Sbjct: 1   MVRD-DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDDGNNTCPATMQVLH 60

Query: 61  NYDFVPNSNLKRLIQIWSDSLQ--------FPLSTLSQSDHILTAVDDLRTNGNGSVSVS 120
             +FVPN  L RLIQIWSDS+Q         P   L   D +L  +  L  + + S    
Sbjct: 61  TKEFVPNRTLHRLIQIWSDSVQRRVDSPESSPPKPLLSQDQVLGLIRRLDRHSDSSFD-- 120

Query: 121 VSVSASLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLR------CRDVDCSELVVRVLD 180
                SLSK++CF    ++N +FL    GFVP L+++L        R +D +EL VR LD
Sbjct: 121 -----SLSKIVCFARDSDENRRFLTGADGFVPTLVELLANAGDGASRSLDLAELAVRALD 180

Query: 181 LVRCEIEDREEFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIA 240
           ++R EI D E+    MLK    CLRSLV VLQRGS ESRIG+AR+LE +A++AESK +IA
Sbjct: 181 MIRSEIADTEKLATSMLKQSH-CLRSLVRVLQRGSVESRIGSARILEAIAVDAESKLIIA 240

Query: 241 ENEAILHELIGVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNA 300
           E E +L EL+ +I  ++D  L+E+ LSCLIA+SM +RVK+KLV LG +K+L + L+ +N 
Sbjct: 241 EKEEVLQELLKLISPEKDRSLMEAGLSCLIAVSMARRVKVKLVNLGAVKSLGKCLEEQNL 300

Query: 301 SVGVTEKVLRLLAAAAAVEEGRSEMLENGGEC-VGGMVKKVMKVSSAATEQAVTALWCIC 360
           SV +TE+VLRLL   ++V+EG SE+  +  EC V  +V+++MKVSSAATE AVT LW +C
Sbjct: 301 SVSMTERVLRLLERVSSVKEGVSEICGSERECVVDRVVQRLMKVSSAATEHAVTVLWGVC 360

Query: 361 YLFREERAAEAVAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSC--LSIYDT 412
           Y+ R   A EAV +A GV KILLLMQ++C   VRQM+ DLLKI ++ S +S   +S YDT
Sbjct: 361 YVHRNRAAQEAVVKANGVTKILLLMQTNCSPAVRQMSADLLKIFRLTSSNSTSFISSYDT 419

[Close]

BLAST of Cla007797 vs. TrEMBL
Match: I1KTF9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G147200 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 7.4e-107
Identity = 228/428 (53.27%), Postives = 295/428 (68.93%), Query Frame = 1


Query: 1   MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 60
           MVR  +L ITVP+ F CPISLD+M+SPVSL TGVTYDRSSIQRWLD+G+NTCPATMQ+L 
Sbjct: 1   MVRD-DLCITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLQ 60

Query: 61  NYDFVPNSNLKRLIQIWSDSL-------QFPLSTLSQS----DHILTAVDDLRTNGNGSV 120
             DFVPN  L+RLIQIWSDS+         P ST SQS    DHIL A+ DL T  +   
Sbjct: 61  TTDFVPNRTLQRLIQIWSDSVTHRVDSPDSPTSTESQSLLSKDHILVAISDLHTRSDNRF 120

Query: 121 SVSVSVSASLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRD--VDCSELVVRVLDL 180
           +       SLSK+  F    E+N  FL R   FVPVL+  L   +  V+  + VV  LDL
Sbjct: 121 N-------SLSKIARFAQDSEENRDFLVRTECFVPVLVGFLDNVNGGVEFLQQVVTALDL 180

Query: 181 VRCEIEDREEFMNMMLK----SDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKN 240
           V  ++EDRE   N++LK     ++  + SL+LVLQ+GS  S+I +AR+L+ VA++AESK 
Sbjct: 181 VISKMEDREGMKNLILKRQGEGEKQSVDSLLLVLQQGSHASKIASARVLKSVAVDAESKL 240

Query: 241 LIAENEAILHELIGVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKH 300
           L+AE E ++ EL+ +I  ++DP LIE+ LSCL++IS P+R K+KLVRLG +K  + LL  
Sbjct: 241 LLAEKEGLVSELLNLITPEKDPDLIENCLSCLVSISTPRRSKMKLVRLGAVKVFSNLLSA 300

Query: 301 RNASVGVTEKVLRLLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWC 360
              SV V EKVL+L+   ++ +EGRSE+ E+   CV  +V KV+KVSS ATE AVT LW 
Sbjct: 301 PGLSVSVKEKVLKLVETVSSTKEGRSEICEDSA-CVSAIVDKVLKVSSVATEHAVTTLWS 360

Query: 361 ICYLFREERAAEAVAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSCLSIYDT 412
           +CYLFR+++A EAV +A G+ KILLLMQS+C   VRQM+ DLLKI +VNS  SCLS YDT
Sbjct: 361 VCYLFRDQKAQEAVTKANGLTKILLLMQSNCSPQVRQMSSDLLKIFRVNS-KSCLSSYDT 418

[Close]

BLAST of Cla007797 vs. TrEMBL
Match: A0A0B2RAI9_GLYSO (U-box domain-containing protein 27 OS=Glycine soja GN=glysoja_008494 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 7.4e-107
Identity = 228/428 (53.27%), Postives = 295/428 (68.93%), Query Frame = 1


Query: 1   MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 60
           MVR  +L ITVP+ F CPISLD+M+SPVSL TGVTYDRSSIQRWLD+G+NTCPATMQ+L 
Sbjct: 1   MVRD-DLCITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLQ 60

Query: 61  NYDFVPNSNLKRLIQIWSDSL-------QFPLSTLSQS----DHILTAVDDLRTNGNGSV 120
             DFVPN  L+RLIQIWSDS+         P ST SQS    DHIL A+ DL T  +   
Sbjct: 61  TTDFVPNRTLQRLIQIWSDSVTDRVDSPDSPTSTESQSLLSKDHILVAISDLHTRSDNRF 120

Query: 121 SVSVSVSASLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRD--VDCSELVVRVLDL 180
           +       SLSK+  F    E+N  FL R   FVPVL+  L   +  V+  + VV  LDL
Sbjct: 121 N-------SLSKIARFAQDSEENRDFLVRTECFVPVLVGFLDNVNGGVEFLQQVVTALDL 180

Query: 181 VRCEIEDREEFMNMMLK----SDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKN 240
           V  ++EDRE   N++LK     ++  + SL+LVLQ+GS  S+I +AR+L+ VA++AESK 
Sbjct: 181 VISKMEDREGMKNLILKRQGEGEKQSVDSLLLVLQQGSHASKIASARVLKSVAVDAESKL 240

Query: 241 LIAENEAILHELIGVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKH 300
           L+AE E ++ EL+ +I  ++DP LIE+ LSCL++IS P+R K+KLVRLG +K  + LL  
Sbjct: 241 LLAEKEGLVSELLNLITPEKDPDLIENCLSCLVSISTPRRSKMKLVRLGAVKVFSNLLSA 300

Query: 301 RNASVGVTEKVLRLLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWC 360
              SV V EKVL+L+   ++ +EGRSE+ E+   CV  +V KV+KVSS ATE AVT LW 
Sbjct: 301 PGLSVSVKEKVLKLVETVSSTKEGRSEICEDSA-CVSAIVDKVLKVSSVATEHAVTTLWS 360

Query: 361 ICYLFREERAAEAVAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSCLSIYDT 412
           +CYLFR+++A EAV +A G+ KILLLMQS+C   VRQM+ DLLKI +VNS  SCLS YDT
Sbjct: 361 VCYLFRDQKAQEAVTKANGLTKILLLMQSNCSPQVRQMSSDLLKIFRVNS-KSCLSSYDT 418

[Close]

BLAST of Cla007797 vs. NCBI nr
Match: gi|659122219|ref|XP_008461027.1| (PREDICTED: LOW QUALITY PROTEIN: U-box domain-containing protein 27 [Cucumis melo])

HSP 1 Score: 660.2 bits (1702), Expect = 2.3e-186
Identity = 342/390 (87.69%), Postives = 356/390 (91.28%), Query Frame = 1


Query: 1   MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 60
           MV+PHNLF+T+PTHF CPISLDLMQSPVSL TGVTYDRSSIQRWLDSGHNTCPATMQ+L 
Sbjct: 1   MVKPHNLFLTIPTHFICPISLDLMQSPVSLITGVTYDRSSIQRWLDSGHNTCPATMQVLP 60

Query: 61  NYDFVPNSNLKRLIQIWSDSLQFPLSTLSQSDHILTAVDDLRTNGNGSVSVSVSVSASLS 120
           NY FVPNSNLKRLIQIWSDSL+F        DHILT VD LRTNGN SV         LS
Sbjct: 61  NYGFVPNSNLKRLIQIWSDSLEF--------DHILTVVDGLRTNGNASVF--------LS 120

Query: 121 KLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDREEFMN 180
           +LLCFG+RLE+NVKFLGRIHGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDR EFMN
Sbjct: 121 ELLCFGSRLEKNVKFLGRIHGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDRVEFMN 180

Query: 181 MMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEAILHELIGVIG 240
           +MLKSDRDCL+SLVLVLQRGSSESRIGT RLLEC+AINAESKNLIAENE ILHELI VIG
Sbjct: 181 LMLKSDRDCLKSLVLVLQRGSSESRIGTVRLLECIAINAESKNLIAENEGILHELIXVIG 240

Query: 241 IDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNASVGVTEKVLRLLAA 300
           IDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNASVGVTEKVLRLLAA
Sbjct: 241 IDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNASVGVTEKVLRLLAA 300

Query: 301 AAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLFREERAAEAVAEA 360
           AAAVEEGRSEM+ NGGECVG MV+KVMKVSSAATEQAVTALWCICYLFREE+AA A AEA
Sbjct: 301 AAAVEEGRSEMMVNGGECVGRMVRKVMKVSSAATEQAVTALWCICYLFREEKAAVAAAEA 360

Query: 361 KGVEKILLLMQSHCPATVRQMAKDLLKILK 391
           KGVEKILLLMQSHCPATVR MAKDLLKI K
Sbjct: 361 KGVEKILLLMQSHCPATVRVMAKDLLKIFK 374

[Close]

BLAST of Cla007797 vs. NCBI nr
Match: gi|449459288|ref|XP_004147378.1| (PREDICTED: U-box domain-containing protein 27 [Cucumis sativus])

HSP 1 Score: 656.4 bits (1692), Expect = 3.4e-185
Identity = 341/390 (87.44%), Postives = 354/390 (90.77%), Query Frame = 1


Query: 1   MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 60
           MV+PHNLFIT+PTHF CPISLDLMQSPVSL TGVTYDRSSIQRWLDSGHNTCPATMQ+L 
Sbjct: 1   MVKPHNLFITIPTHFLCPISLDLMQSPVSLITGVTYDRSSIQRWLDSGHNTCPATMQVLT 60

Query: 61  NYDFVPNSNLKRLIQIWSDSLQFPLSTLSQSDHILTAVDDLRTNGNGSVSVSVSVSASLS 120
           NYDFVPNSNLKRLIQIWSDSL+         DHILT VD LRTNGN SVS        LS
Sbjct: 61  NYDFVPNSNLKRLIQIWSDSLEL--------DHILTVVDGLRTNGNASVS--------LS 120

Query: 121 KLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDREEFMN 180
           +LLCFG+RLE+NVKFLGRI GFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDR EFMN
Sbjct: 121 ELLCFGSRLEKNVKFLGRIRGFVPVLLDVLRCRDVDCSELVVRVLDLVRCEIEDRVEFMN 180

Query: 181 MMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEAILHELIGVIG 240
           +MLKSDRDCLRSLVLVLQRGSSESRIGT RLLEC+AINAESKNLIAENE ILHELI VIG
Sbjct: 181 LMLKSDRDCLRSLVLVLQRGSSESRIGTVRLLECIAINAESKNLIAENEGILHELIEVIG 240

Query: 241 IDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNASVGVTEKVLRLLAA 300
           IDEDPKLIESVLSCLI ISMPKRVKIKLVRLGVIKALTRLLKH+NASVGVTEKVLRLLAA
Sbjct: 241 IDEDPKLIESVLSCLIPISMPKRVKIKLVRLGVIKALTRLLKHQNASVGVTEKVLRLLAA 300

Query: 301 AAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLFREERAAEAVAEA 360
           AAAVEEGR EM+ENGGECVG MV+KVMKVSSAATEQAVTALWCICYL+REERAA A AEA
Sbjct: 301 AAAVEEGRWEMMENGGECVGRMVRKVMKVSSAATEQAVTALWCICYLYREERAAVAAAEA 360

Query: 361 KGVEKILLLMQSHCPATVRQMAKDLLKILK 391
           KGVEKILLLMQSHCPATVR MAKDLLK  K
Sbjct: 361 KGVEKILLLMQSHCPATVRAMAKDLLKTFK 374

[Close]

BLAST of Cla007797 vs. NCBI nr
Match: gi|225431543|ref|XP_002281970.1| (PREDICTED: U-box domain-containing protein 27 [Vitis vinifera])

HSP 1 Score: 420.6 bits (1080), Expect = 3.1e-114
Identity = 227/415 (54.70%), Postives = 301/415 (72.53%), Query Frame = 1


Query: 1   MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 60
           MVR  NLFITVP+ F CPISLD+M+SPVSL TGVTYDRSSIQRWLD+G+NTCPATMQ+LH
Sbjct: 1   MVRD-NLFITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLH 60

Query: 61  NYDFVPNSNLKRLIQIWSDSLQFPLSTLSQSDHILTAV--DDLRTNGNGSVSVSVSVSAS 120
           + DFVPN  L+RLIQIWS+S++   ++      ++ ++  D  R       S        
Sbjct: 61  SKDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLEC 120

Query: 121 LSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVD--CSELVVRVLDLVRCEIEDRE 180
           +SK++CF    E++ KFL RI GFV +L+D L   + +    E VVRVLD++  E ED +
Sbjct: 121 MSKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVRVLDMIISEHEDHK 180

Query: 181 EFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEAILHELI 240
           +  N MLKSDRDCL S++LVLQ+GS+ESRI +AR+LE +AI+AESK LIAE + +  ELI
Sbjct: 181 QLANSMLKSDRDCLSSILLVLQQGSAESRIASARVLESIAIDAESKLLIAEKDGLFSELI 240

Query: 241 GVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNASVGVTEKVLR 300
            ++  + DP +IES LSCLIA+SMP+R++ K+VRLGV+K LT+LL   N SV VTEK L+
Sbjct: 241 RIMSTETDPTMIESTLSCLIAVSMPRRIRPKIVRLGVVKQLTKLLSDPNWSVSVTEKALK 300

Query: 301 LLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLFREERAAEA 360
           LL  A++ +EG+SE+ EN  +CV  +V+K++KVSS ATE AVT LW +CYL R++RA   
Sbjct: 301 LLEMASSCKEGKSEICEN-SDCVSAIVQKMLKVSSTATEHAVTILWSVCYLSRDDRAQST 360

Query: 361 VAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSCLSIYDTNNSYIMPF 412
           V +  G+ KIL+LMQS+C   VRQ+A DLLKI +V+S  SCLS YDT  ++IMPF
Sbjct: 361 VTQNNGLTKILVLMQSNCSPAVRQLAGDLLKIFRVSS-KSCLSSYDTKTTHIMPF 412

[Close]

BLAST of Cla007797 vs. NCBI nr
Match: gi|659080871|ref|XP_008441024.1| (PREDICTED: U-box domain-containing protein 27 [Cucumis melo])

HSP 1 Score: 404.4 bits (1038), Expect = 2.3e-109
Identity = 224/418 (53.59%), Postives = 303/418 (72.49%), Query Frame = 1


Query: 6   NLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILHNYDFV 65
           +L IT+P+ F CPISLD+M+SPVSL TGVTYDRSSIQ+WLD+G+NTCPATMQ+L   +FV
Sbjct: 5   DLCITIPSDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQTKEFV 64

Query: 66  PNSNLKRLIQIWSDS----LQFPLSTLSQSDH----ILTAVDDLRTNGNGSVSVSVSVSA 125
           PN NL RLIQIWSDS    L  P+S  S S H    ++  +DD R+  +           
Sbjct: 65  PNHNLHRLIQIWSDSHHQRLHSPVSDSSLSSHQILRLINRMDDHRSRAD----------- 124

Query: 126 SLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLRCRDVDCSELV---VRVLDLVRCEIED 185
           SL +L+ F +   +N + L  I G VPVL+D+L C +VD  +LV   VR+L L+R EI D
Sbjct: 125 SLPRLVSFASESVENRRLLCGIDGLVPVLVDLL-C-NVDAGDLVDQTVRLLHLIRSEIGD 184

Query: 186 REEFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIAENEAILHE 245
           +E F+  ML SDR+C+ SL+L+L++G+ E +I +A LLE +AI+AE+K +IAE + ++ E
Sbjct: 185 KERFVKTMLNSDRNCISSLLLILRKGTVELKICSANLLEYLAIDAEAKIVIAETDGLMRE 244

Query: 246 LIGVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRN--ASVGVTE 305
           L+ +I  + D  +IES LSCLI+ISMPKR+KIKLV+LGVIK++T+LL   N  +S+ +TE
Sbjct: 245 LLKLINSENDTTVIESALSCLISISMPKRIKIKLVQLGVIKSVTKLLSESNSSSSISMTE 304

Query: 306 KVLRLLAAAAAVEEGRSEMLENGGECVGGMVKKVMKVSSAATEQAVTALWCICYLFREER 365
           KVL++L  A+ V EGR E+ E+   CV  +V+KV+KVS+AATE AVT LW +CYLFR+E+
Sbjct: 305 KVLKVLETASTVREGRKEIGED-SVCVAAIVQKVLKVSNAATEHAVTTLWSVCYLFRDEK 364

Query: 366 AAEAVAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSCLSIYDTNNSYIMP 411
           A EA+ +A G+ KILLLMQS+C   VRQMA+DLLKI ++NS  SCLS YDT  ++IMP
Sbjct: 365 AGEALTKANGLTKILLLMQSNCSPPVRQMARDLLKIFRINS-KSCLSSYDTKTTHIMP 407

[Close]

BLAST of Cla007797 vs. NCBI nr
Match: gi|703078399|ref|XP_010090879.1| (U-box domain-containing protein 28 [Morus notabilis])

HSP 1 Score: 399.8 bits (1026), Expect = 5.7e-108
Identity = 225/428 (52.57%), Postives = 295/428 (68.93%), Query Frame = 1


Query: 1   MVRPHNLFITVPTHFCCPISLDLMQSPVSLTTGVTYDRSSIQRWLDSGHNTCPATMQILH 60
           MVR  +L+ITVP+ F CPISLD+M+SPVSL TGVTYDRSSIQRWLD G+NTCPATMQ+LH
Sbjct: 1   MVRD-DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDDGNNTCPATMQVLH 60

Query: 61  NYDFVPNSNLKRLIQIWSDSLQ--------FPLSTLSQSDHILTAVDDLRTNGNGSVSVS 120
             +FVPN  L RLIQIWSDS+Q         P   L   D +L  +  L  + + S    
Sbjct: 61  TKEFVPNRTLHRLIQIWSDSVQRRVDSPESSPPKPLLSQDQVLGLIRRLDRHSDSSFD-- 120

Query: 121 VSVSASLSKLLCFGARLEQNVKFLGRIHGFVPVLLDVLR------CRDVDCSELVVRVLD 180
                SLSK++CF    ++N +FL    GFVP L+++L        R +D +EL VR LD
Sbjct: 121 -----SLSKIVCFARDSDENRRFLTGADGFVPTLVELLANAGDGASRSLDLAELAVRALD 180

Query: 181 LVRCEIEDREEFMNMMLKSDRDCLRSLVLVLQRGSSESRIGTARLLECVAINAESKNLIA 240
           ++R EI D E+    MLK    CLRSLV VLQRGS ESRIG+AR+LE +A++AESK +IA
Sbjct: 181 MIRSEIADTEKLATSMLKQSH-CLRSLVRVLQRGSVESRIGSARILEAIAVDAESKLIIA 240

Query: 241 ENEAILHELIGVIGIDEDPKLIESVLSCLIAISMPKRVKIKLVRLGVIKALTRLLKHRNA 300
           E E +L EL+ +I  ++D  L+E+ LSCLIA+SM +RVK+KLV LG +K+L + L+ +N 
Sbjct: 241 EKEEVLQELLKLISPEKDRSLMEAGLSCLIAVSMARRVKVKLVNLGAVKSLGKCLEEQNL 300

Query: 301 SVGVTEKVLRLLAAAAAVEEGRSEMLENGGEC-VGGMVKKVMKVSSAATEQAVTALWCIC 360
           SV +TE+VLRLL   ++V+EG SE+  +  EC V  +V+++MKVSSAATE AVT LW +C
Sbjct: 301 SVSMTERVLRLLERVSSVKEGVSEICGSERECVVDRVVQRLMKVSSAATEHAVTVLWGVC 360

Query: 361 YLFREERAAEAVAEAKGVEKILLLMQSHCPATVRQMAKDLLKILKVNSISSC--LSIYDT 412
           Y+ R   A EAV +A GV KILLLMQ++C   VRQM+ DLLKI ++ S +S   +S YDT
Sbjct: 361 YVHRNRAAQEAVVKANGVTKILLLMQTNCSPAVRQMSADLLKIFRLTSSNSTSFISSYDT 419

The following BLAST results are available for this feature:

BLAST of Cla007797 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUB27_ARATH	1.1e-98	48.83	U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27 PE=2 SV=1	[more]
PUB28_ARATH	2.1e-94	47.28	U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28 PE=1 SV=1	[more]
PUB29_ARATH	1.3e-88	45.93	U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29 PE=1 SV=1	[more]
PUB25_ARATH	3.9e-32	30.79	U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1	[more]
PUB23_ARATH	4.3e-31	27.23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1	[more]

BLAST of Cla007797 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMY5_CUCSA	2.3e-185	87.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302090 PE=4 SV=1	[more]
F6I0G9_VITVI	2.2e-114	54.70	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g00870 PE=4 SV=...	[more]
W9QLX1_9ROSA	3.9e-108	52.57	U-box domain-containing protein 28 OS=Morus notabilis GN=L484_020739 PE=4 SV=1	[more]
I1KTF9_SOYBN	7.4e-107	53.27	Uncharacterized protein OS=Glycine max GN=GLYMA_08G147200 PE=4 SV=1	[more]
A0A0B2RAI9_GLYSO	7.4e-107	53.27	U-box domain-containing protein 27 OS=Glycine soja GN=glysoja_008494 PE=4 SV=1	[more]

BLAST of Cla007797 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659122219\|ref\|XP_008461027.1\|	2.3e-186	87.69	PREDICTED: LOW QUALITY PROTEIN: U-box domain-containing protein 27 [Cucumis melo...	[more]
gi\|449459288\|ref\|XP_004147378.1\|	3.4e-185	87.44	PREDICTED: U-box domain-containing protein 27 [Cucumis sativus]	[more]
gi\|225431543\|ref\|XP_002281970.1\|	3.1e-114	54.70	PREDICTED: U-box domain-containing protein 27 [Vitis vinifera]	[more]
gi\|659080871\|ref\|XP_008441024.1\|	2.3e-109	53.59	PREDICTED: U-box domain-containing protein 27 [Cucumis melo]	[more]
gi\|703078399\|ref\|XP_010090879.1\|	5.7e-108	52.57	U-box domain-containing protein 28 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000225	Armadillo
IPR003613	Ubox_domain
IPR011989	ARM-like
IPR013083	Znf_RING/FYVE/PHD
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0004842	ubiquitin-protein transferase activity
GO:0005488	binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0005488	binding
molecular_function	GO:0016740	transferase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU48779	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla007797	Cla007797.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU48779	WMU48779	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	PROFILE	PS50176	ARM_REPEAT	coord: 272..316 score: 9
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 11..78 score: 1.1
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 14..77 score: 6.8
IPR003613	U box domain	PROFILE	PS51698	U_BOX	coord: 10..84 score: 34
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 116..390 score: 3.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 11..79 score: 1.3
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 127..400 score: 6.99
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 1..411 score: 2.2E
None	No IPR available	PANTHER	PTHR22849:SF20	SUBFAMILY NOT NAMED	coord: 1..411 score: 2.2E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 8..79 score: 3.71

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla007797	Cla97C01G014510	Watermelon (97103) v2	wmwmbB310
Cla007797	Cla97C02G026900	Watermelon (97103) v2	wmwmbB324
Cla007797	Csa6G484010	Cucumber (Chinese Long) v2	cuwmB531
Cla007797	Csa2G302090	Cucumber (Chinese Long) v2	cuwmB141
Cla007797	MELO3C023258	Melon (DHL92) v3.5.1	mewmB123
Cla007797	ClCG02G000630	Watermelon (Charleston Gray)	wcgwmB206
Cla007797	ClCG01G015580	Watermelon (Charleston Gray)	wcgwmB166
Cla007797	CSPI02G15590	Wild cucumber (PI 183967)	cpiwmB143
Cla007797	CSPI06G26630	Wild cucumber (PI 183967)	cpiwmB550
Cla007797	Cucsa.250000	Cucumber (Gy14) v1	cgywmB470
Cla007797	Cucsa.101080	Cucumber (Gy14) v1	cgywmB140
Cla007797	CmaCh03G010830	Cucurbita maxima (Rimu)	cmawmB644
Cla007797	CmaCh02G006210	Cucurbita maxima (Rimu)	cmawmB584
Cla007797	CmoCh02G006250	Cucurbita moschata (Rifu)	cmowmB578
Cla007797	Lsi01G011360	Bottle gourd (USVL1VR-Ls)	lsiwmB160
Cla007797	Lsi10G007130	Bottle gourd (USVL1VR-Ls)	lsiwmB066
Cla007797	Cp4.1LG05g10560	Cucurbita pepo (Zucchini)	cpewmB746
Cla007797	Cp4.1LG10g03430	Cucurbita pepo (Zucchini)	cpewmB093
Cla007797	Cp4.1LG16g00890	Cucurbita pepo (Zucchini)	cpewmB302
Cla007797	CsGy6G026060	Cucumber (Gy14) v2	cgybwmB496
Cla007797	CsGy2G015560	Cucumber (Gy14) v2	cgybwmB134
Cla007797	MELO3C023258.2	Melon (DHL92) v3.6.1	medwmB118
Cla007797	Carg11686	Silver-seed gourd	carwmB1056
Cla007797	Carg10548	Silver-seed gourd	carwmB0229
Cla007797	CsaV3_2G018140	Cucumber (Chinese Long) v3	cucwmB154
Cla007797	CsaV3_6G041810	Cucumber (Chinese Long) v3	cucwmB556
Cla007797	Bhi03G001059	Wax gourd	wgowmB461

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla007797	Cla008448	Watermelon (97103) v1	wmwmB145

The following block(s) are covering this gene:


Gene	Organism	Block
Cla007797	Melon (DHL92) v3.6.1	medwmB128
Cla007797	Silver-seed gourd	carwmB0716
Cla007797	Cucurbita maxima (Rimu)	cmawmB532
Cla007797	Cucurbita moschata (Rifu)	cmowmB521
Cla007797	Cucurbita pepo (Zucchini)	cpewmB288