Cla008398 (gene) Watermelon (97103) v1

Overview
NameCla008398
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionNHL1 (Fragment) (AHRD V1 **-- B0LZH6_ARATH); contains Interpro domain(s) IPR010847 Harpin-induced 1
LocationChr1 : 9710238 .. 9710864 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAGGAATGCGTTCACCACAGCAAAAAACGGCCAAAGCTAATCCGCCGAATTTACGCCGGAGTTCTCATTTTCCTCTTCCTCGTCCTCCTCACTATCCTCCTAATTTGGGCGATTCTTCAGCCTACAAAGCCCAAATTCATCATCCAAGACGCCACCGTCTTCATCTTCAATGTCACCGCCGCTAACTTTATCTCCTCCAGTATCCAAGTCACCGTCTCCTCCCGGAACCCTAACGACAAGATCGGCATCTACTACGACCGCCTCGACGTCTACGCCGTTTACCGGAACCAACAGATCACTCTCCGTACCGTCATTCAACCTACCTACCAAGGCCACAACGATCTCAACATCTGGTCTCCGTTCCTCGTCGGTAACGCCGTTCCAATCTCTCCGTACAACGGCGCCGCTCTGAATCAGGACCAGGCCGTCGGCACCGTCCAGTTGTCGATCAAACTCGATGGTCGCGTCCGATTCAAGGTCGGTACCTTCATCTCCGGCCGCTACCATCTCAACGTCGACTGTCCGGCGGCTATCATGTTCGGAAATCCTACCGCCGGTATTATCGTCGGTAATAACGCCGTTAAATACCAGTTGGTACGGCCGTGCAGCGTCAGTGTATGA

mRNA sequence

ATGTCAAAGGAATGCGTTCACCACAGCAAAAAACGGCCAAAGCTAATCCGCCGAATTTACGCCGGAGTTCTCATTTTCCTCTTCCTCGTCCTCCTCACTATCCTCCTAATTTGGGCGATTCTTCAGCCTACAAAGCCCAAATTCATCATCCAAGACGCCACCGTCTTCATCTTCAATGTCACCGCCGCTAACTTTATCTCCTCCAGTATCCAAGTCACCGTCTCCTCCCGGAACCCTAACGACAAGATCGGCATCTACTACGACCGCCTCGACGTCTACGCCGTTTACCGGAACCAACAGATCACTCTCCGTACCGTCATTCAACCTACCTACCAAGGCCACAACGATCTCAACATCTGGTCTCCGTTCCTCGTCGGTAACGCCGTTCCAATCTCTCCGTACAACGGCGCCGCTCTGAATCAGGACCAGGCCGTCGGCACCGTCCAGTTGTCGATCAAACTCGATGGTCGCGTCCGATTCAAGGTCGGTACCTTCATCTCCGGCCGCTACCATCTCAACGTCGACTGTCCGGCGGCTATCATGTTCGGAAATCCTACCGCCGGTATTATCGTCGGTAATAACGCCGTTAAATACCAGTTGGTACGGCCGTGCAGCGTCAGTGTATGA

Coding sequence (CDS)

ATGTCAAAGGAATGCGTTCACCACAGCAAAAAACGGCCAAAGCTAATCCGCCGAATTTACGCCGGAGTTCTCATTTTCCTCTTCCTCGTCCTCCTCACTATCCTCCTAATTTGGGCGATTCTTCAGCCTACAAAGCCCAAATTCATCATCCAAGACGCCACCGTCTTCATCTTCAATGTCACCGCCGCTAACTTTATCTCCTCCAGTATCCAAGTCACCGTCTCCTCCCGGAACCCTAACGACAAGATCGGCATCTACTACGACCGCCTCGACGTCTACGCCGTTTACCGGAACCAACAGATCACTCTCCGTACCGTCATTCAACCTACCTACCAAGGCCACAACGATCTCAACATCTGGTCTCCGTTCCTCGTCGGTAACGCCGTTCCAATCTCTCCGTACAACGGCGCCGCTCTGAATCAGGACCAGGCCGTCGGCACCGTCCAGTTGTCGATCAAACTCGATGGTCGCGTCCGATTCAAGGTCGGTACCTTCATCTCCGGCCGCTACCATCTCAACGTCGACTGTCCGGCGGCTATCATGTTCGGAAATCCTACCGCCGGTATTATCGTCGGTAATAACGCCGTTAAATACCAGTTGGTACGGCCGTGCAGCGTCAGTGTATGA

Protein sequence

MSKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNVTAANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWSPFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAIMFGNPTAGIIVGNNAVKYQLVRPCSVSV
Homology
[Close]
BLAST of Cla008398 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-62
Identity = 116/208 (55.77%), Postives = 150/208 (72.12%), Query Frame = 1 

Query: 2   SKECVHHSKKRPKLIRRIYAGVLI-FLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNV 61
           +K+C +H             GV+I F+ +VL+TI L+W ILQPTKP+FI+QDATV+ FN+
Sbjct: 3   TKDCGNHGGGGGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNL 62

Query: 62  TAANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIW 121
           +  N ++S+ Q+T++SRN N +IGIYYDRL VYA YRNQQITLRT I PTYQGH + N+W
Sbjct: 63  SQPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVW 122

Query: 122 SPFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 181
           SPF+ GN+VPI+P+N  AL  +Q  G V L I+ DGRVR+KVGT I+G+YHL+V C A I
Sbjct: 123 SPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 182

Query: 182 MFGNPTAGIIVGNNAVKYQLVRPCSVSV 209
              +  AG+ VG NAVKY L+  CSV+V
Sbjct: 183 NLADKAAGVHVGENAVKYMLINKCSVNV 210

[Close]
BLAST of Cla008398 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.1e-18
Identity = 54/161 (33.54%), Postives = 87/161 (54.04%), Query Frame = 1 

Query: 19  IYAGVLIFLFLVL-LTILLIWAILQPTKPKFIIQDATVFIFNVTAA-NFISSSIQVTVSS 78
           ++  V+I L ++L +  L+ W I++P   KF + DA++  F+ T+  N +  ++ +TV  
Sbjct: 40  LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query: 79  RNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWSPFLVG-NAVPISPYN 138
           RNPN +IG+YYDR++ +A Y  ++ +  T + P YQGH +  + +P   G N V  +   
Sbjct: 100 RNPNKRIGLYYDRIEAHAYYEGKRFSTIT-LTPFYQGHKNTTVLTPTFQGQNLVIFNAGQ 159

Query: 139 GAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDC 177
              LN ++  G   + IK   RVRFK+G     R    VDC
Sbjct: 160 SRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

[Close]
BLAST of Cla008398 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.7e-15
Identity = 51/178 (28.65%), Postives = 87/178 (48.88%), Query Frame = 1 

Query: 16  IRRIYAGVLIFLFLVL-LTILLIWAILQPTKPKFIIQDATVFIFNVTAANFISSSIQVTV 75
           I  +   +LI + ++L +  L+IW I +P   KF + DA +  F +   N +  ++ +  
Sbjct: 44  ILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNF 103

Query: 76  SSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWSPFLVG-NAVPISP 135
           + RNPN +IG+YYD ++V   Y +Q+  +   I   YQGH +  +    LVG   V +  
Sbjct: 104 TIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDG 163

Query: 136 YNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI-MFGNPTAGII 191
                LN+D      ++  KL  ++RFK G   S R+   + C   + +  N T+G +
Sbjct: 164 GERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFV 221

[Close]
BLAST of Cla008398 vs. TrEMBL
Match: A0A0A0KF12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454475 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 4.5e-108
Identity = 193/208 (92.79%), Postives = 202/208 (97.12%), Query Frame = 1 

Query: 1   MSKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNV 60
           MSKEC HHSKKRPKLIRRIYAG+LIFLFLVLLTILLIWAILQPTKPKF+IQDATV++FN+
Sbjct: 1   MSKECAHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNL 60

Query: 61  TAANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIW 120
           TAANFISSSIQVTV SRNPNDKIG+YYDRLDVYAVY NQQITLRT IQPTYQGHND+NIW
Sbjct: 61  TAANFISSSIQVTVYSRNPNDKIGVYYDRLDVYAVYHNQQITLRTGIQPTYQGHNDVNIW 120

Query: 121 SPFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180
           SPFL+GN VPISPYNGA LNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI
Sbjct: 121 SPFLIGNNVPISPYNGATLNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 MFGNPTAGIIVGNNAVKYQLVRPCSVSV 209
           MFGNPTAG+IVGNNAVKYQLVRPCSVSV
Sbjct: 181 MFGNPTAGVIVGNNAVKYQLVRPCSVSV 208

[Close]
BLAST of Cla008398 vs. TrEMBL
Match: B9IIM8_POPTR (Harpin-induced family protein OS=Populus trichocarpa GN=POPTR_0016s07220g PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.7e-80
Identity = 141/207 (68.12%), Postives = 176/207 (85.02%), Query Frame = 1 

Query: 2   SKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNVT 61
           SK+C  H  +R K+ RRI+AG+LIFL +VL+ ILL+WAIL+P+KPKFI+QDATV+ FNV+
Sbjct: 3   SKDCGSHGHRRRKIFRRIFAGILIFLLIVLIIILLVWAILRPSKPKFILQDATVYAFNVS 62

Query: 62  AANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWS 121
           + N ++S+ QVT+SSRNPNDK+GIYYD+LDVYA YRNQQITLRT I  +YQGH ++++WS
Sbjct: 63  SPNVLTSNFQVTLSSRNPNDKVGIYYDKLDVYATYRNQQITLRTSIPTSYQGHKEIDVWS 122

Query: 122 PFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAIM 181
           PF+ G+AVP+SPYN  AL+QDQA GTV L IK+DGRVRFKVGTFIS +YHLNV CPA I 
Sbjct: 123 PFIYGSAVPVSPYNSVALSQDQATGTVLLMIKIDGRVRFKVGTFISAKYHLNVRCPAYIQ 182

Query: 182 FGNPTAGIIVGNNAVKYQLVRPCSVSV 209
           FG+ T+GIIVG NA+KYQLV  CSVS+
Sbjct: 183 FGSRTSGIIVGENAIKYQLVTRCSVSL 209

[Close]
BLAST of Cla008398 vs. TrEMBL
Match: A0A067KJ19_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08771 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 4.3e-79
Identity = 138/207 (66.67%), Postives = 173/207 (83.57%), Query Frame = 1 

Query: 2   SKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNVT 61
           +K+C +H +KR KL RRI+AG+LIFLFLVL+TIL+IWA+L+P+KP F++QD TV+ FN +
Sbjct: 3   AKDCGNHGEKRRKLFRRIFAGILIFLFLVLVTILIIWAVLRPSKPSFVLQDVTVYAFNAS 62

Query: 62  AANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWS 121
             NF++S+ QVT SSRNPNDKIGIYYDRLD+YA YR+QQITLR+ I P YQGH ++N+WS
Sbjct: 63  VPNFLTSNFQVTFSSRNPNDKIGIYYDRLDIYATYRSQQITLRSAIPPNYQGHKEINVWS 122

Query: 122 PFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAIM 181
           P + G A+P++PYN  ALNQDQ+ GTV L IK+DGRVRFKVGTFISG+YHL V CPA I 
Sbjct: 123 PNIYGTAIPVAPYNAIALNQDQSAGTVLLMIKMDGRVRFKVGTFISGKYHLYVRCPAYIQ 182

Query: 182 FGNPTAGIIVGNNAVKYQLVRPCSVSV 209
           FG+ TAGIIVG N+VKY L+  CSVS+
Sbjct: 183 FGSRTAGIIVGENSVKYSLLVSCSVSI 209

[Close]
BLAST of Cla008398 vs. TrEMBL
Match: B9T2S2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0437510 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-76
Identity = 133/207 (64.25%), Postives = 170/207 (82.13%), Query Frame = 1 

Query: 2   SKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNVT 61
           +K+C +H  KR KL RRI+AG+LIFLFLVL+TIL++WA+L+P+KPKF++QD TVF FN +
Sbjct: 3   AKDCGNHGHKRRKLFRRIFAGILIFLFLVLVTILIVWAVLRPSKPKFVLQDVTVFAFNAS 62

Query: 62  AANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWS 121
             N+++S+ Q+T S+RNPNDK+GIYYD+LDVYA YRNQQITLR+ I   YQGH ++N+WS
Sbjct: 63  TPNYLTSNFQITFSTRNPNDKVGIYYDKLDVYATYRNQQITLRSAIPTNYQGHEEINVWS 122

Query: 122 PFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAIM 181
           P + G AVP++PYN A+L QDQ  G V + IK+DGRVRFKVGTF+SGRYHL V CPA I 
Sbjct: 123 PNIYGTAVPVAPYNAASLAQDQNAGAVLMMIKMDGRVRFKVGTFVSGRYHLYVKCPAYIQ 182

Query: 182 FGNPTAGIIVGNNAVKYQLVRPCSVSV 209
           FG+ TAGIIVG N+VKY L+  CSVS+
Sbjct: 183 FGSRTAGIIVGENSVKYSLLVSCSVSL 209

[Close]
BLAST of Cla008398 vs. TrEMBL
Match: U5GE91_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s22060g PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.0e-76
Identity = 133/206 (64.56%), Postives = 171/206 (83.01%), Query Frame = 1 

Query: 3   KECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNVTA 62
           K+C HH +KR +L+R ++AG+L FL + L+ IL++WAIL+P+KPKFI+QDATV+ FNV+ 
Sbjct: 5   KDCGHHGQKRRRLVRLLFAGILTFLLIALIIILIVWAILRPSKPKFILQDATVYAFNVSY 64

Query: 63  ANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWSP 122
            NFI+S+ QVTVSSRNP+D++GIYYDRLD+YA YRNQQITLRT I  +YQGH ++N+WSP
Sbjct: 65  PNFITSNFQVTVSSRNPDDRVGIYYDRLDIYATYRNQQITLRTSIPTSYQGHKEINVWSP 124

Query: 123 FLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAIMF 182
           F+ GN+VP+SPYN AAL+QDQ  G V L IK+DGRVRFKVGTFIS +Y+L+V CPA I F
Sbjct: 125 FIYGNSVPVSPYNSAALSQDQGAGVVMLMIKIDGRVRFKVGTFISAKYNLHVRCPAYIQF 184

Query: 183 GNPTAGIIVGNNAVKYQLVRPCSVSV 209
           G+ T GI+VG+N VKYQL   C VS+
Sbjct: 185 GSRTNGIMVGDNVVKYQLATSCHVSL 210

[Close]
BLAST of Cla008398 vs. NCBI nr
Match: gi|659125306|ref|XP_008462618.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 409.5 bits (1051), Expect = 3.6e-111
Identity = 199/208 (95.67%), Postives = 207/208 (99.52%), Query Frame = 1 

Query: 1   MSKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNV 60
           MSKECVHHSKKRPKLIRRIYAG+LIFLFLVLLTILLIWAILQPTKPKF+IQDATV++FN+
Sbjct: 1   MSKECVHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNI 60

Query: 61  TAANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIW 120
           TAANFISSSIQVTVSSRNPNDKIG+YYDRLDVYAVYRNQQITLRT IQPTYQGHNDLNIW
Sbjct: 61  TAANFISSSIQVTVSSRNPNDKIGVYYDRLDVYAVYRNQQITLRTGIQPTYQGHNDLNIW 120

Query: 121 SPFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180
           SPFLVGN+VPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI
Sbjct: 121 SPFLVGNSVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 MFGNPTAGIIVGNNAVKYQLVRPCSVSV 209
           MFGNPTAG+IVGNNAVKYQLVRPCSVSV
Sbjct: 181 MFGNPTAGVIVGNNAVKYQLVRPCSVSV 208

[Close]
BLAST of Cla008398 vs. NCBI nr
Match: gi|449451173|ref|XP_004143336.1| (PREDICTED: protein YLS9 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 6.4e-108
Identity = 193/208 (92.79%), Postives = 202/208 (97.12%), Query Frame = 1 

Query: 1   MSKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNV 60
           MSKEC HHSKKRPKLIRRIYAG+LIFLFLVLLTILLIWAILQPTKPKF+IQDATV++FN+
Sbjct: 1   MSKECAHHSKKRPKLIRRIYAGILIFLFLVLLTILLIWAILQPTKPKFVIQDATVYLFNL 60

Query: 61  TAANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIW 120
           TAANFISSSIQVTV SRNPNDKIG+YYDRLDVYAVY NQQITLRT IQPTYQGHND+NIW
Sbjct: 61  TAANFISSSIQVTVYSRNPNDKIGVYYDRLDVYAVYHNQQITLRTGIQPTYQGHNDVNIW 120

Query: 121 SPFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180
           SPFL+GN VPISPYNGA LNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI
Sbjct: 121 SPFLIGNNVPISPYNGATLNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAI 180

Query: 181 MFGNPTAGIIVGNNAVKYQLVRPCSVSV 209
           MFGNPTAG+IVGNNAVKYQLVRPCSVSV
Sbjct: 181 MFGNPTAGVIVGNNAVKYQLVRPCSVSV 208

[Close]
BLAST of Cla008398 vs. NCBI nr
Match: gi|743898624|ref|XP_011042605.1| (PREDICTED: protein YLS9-like [Populus euphratica])

HSP 1 Score: 306.6 bits (784), Expect = 3.3e-80
Identity = 141/207 (68.12%), Postives = 178/207 (85.99%), Query Frame = 1 

Query: 2   SKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNVT 61
           SK+C  H ++R K+ RRI+AG+LIFL +VL+ ILL+WAIL+P+KPKFI+QDATV+ FNV+
Sbjct: 3   SKDCGSHGQERRKIFRRIFAGILIFLLIVLIIILLVWAILRPSKPKFILQDATVYAFNVS 62

Query: 62  AANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWS 121
           + N ++S+ QVT+SSRNPNDK+GIYYD+LDVYA YRNQQITLRT I  +YQGH ++++WS
Sbjct: 63  SPNVLTSNFQVTISSRNPNDKVGIYYDKLDVYATYRNQQITLRTSIPTSYQGHKEIDVWS 122

Query: 122 PFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAIM 181
           PF+ G+AVP++PYN  AL+QDQA GTV L IK+DGRVRFKVGTFISG+YHLNV CPA I 
Sbjct: 123 PFVYGSAVPVAPYNSVALSQDQATGTVLLMIKIDGRVRFKVGTFISGKYHLNVRCPAYIQ 182

Query: 182 FGNPTAGIIVGNNAVKYQLVRPCSVSV 209
           FG+ T+GIIVG NA+KYQLV  CSVS+
Sbjct: 183 FGSRTSGIIVGENAIKYQLVTRCSVSL 209

[Close]
BLAST of Cla008398 vs. NCBI nr
Match: gi|224138358|ref|XP_002322794.1| (harpin-induced family protein [Populus trichocarpa])

HSP 1 Score: 304.7 bits (779), Expect = 1.3e-79
Identity = 141/207 (68.12%), Postives = 176/207 (85.02%), Query Frame = 1 

Query: 2   SKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNVT 61
           SK+C  H  +R K+ RRI+AG+LIFL +VL+ ILL+WAIL+P+KPKFI+QDATV+ FNV+
Sbjct: 3   SKDCGSHGHRRRKIFRRIFAGILIFLLIVLIIILLVWAILRPSKPKFILQDATVYAFNVS 62

Query: 62  AANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWS 121
           + N ++S+ QVT+SSRNPNDK+GIYYD+LDVYA YRNQQITLRT I  +YQGH ++++WS
Sbjct: 63  SPNVLTSNFQVTLSSRNPNDKVGIYYDKLDVYATYRNQQITLRTSIPTSYQGHKEIDVWS 122

Query: 122 PFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAIM 181
           PF+ G+AVP+SPYN  AL+QDQA GTV L IK+DGRVRFKVGTFIS +YHLNV CPA I 
Sbjct: 123 PFIYGSAVPVSPYNSVALSQDQATGTVLLMIKIDGRVRFKVGTFISAKYHLNVRCPAYIQ 182

Query: 182 FGNPTAGIIVGNNAVKYQLVRPCSVSV 209
           FG+ T+GIIVG NA+KYQLV  CSVS+
Sbjct: 183 FGSRTSGIIVGENAIKYQLVTRCSVSL 209

[Close]
BLAST of Cla008398 vs. NCBI nr
Match: gi|802611158|ref|XP_012074337.1| (PREDICTED: protein YLS9-like [Jatropha curcas])

HSP 1 Score: 302.4 bits (773), Expect = 6.2e-79
Identity = 138/207 (66.67%), Postives = 173/207 (83.57%), Query Frame = 1 

Query: 2   SKECVHHSKKRPKLIRRIYAGVLIFLFLVLLTILLIWAILQPTKPKFIIQDATVFIFNVT 61
           +K+C +H +KR KL RRI+AG+LIFLFLVL+TIL+IWA+L+P+KP F++QD TV+ FN +
Sbjct: 3   AKDCGNHGEKRRKLFRRIFAGILIFLFLVLVTILIIWAVLRPSKPSFVLQDVTVYAFNAS 62

Query: 62  AANFISSSIQVTVSSRNPNDKIGIYYDRLDVYAVYRNQQITLRTVIQPTYQGHNDLNIWS 121
             NF++S+ QVT SSRNPNDKIGIYYDRLD+YA YR+QQITLR+ I P YQGH ++N+WS
Sbjct: 63  VPNFLTSNFQVTFSSRNPNDKIGIYYDRLDIYATYRSQQITLRSAIPPNYQGHKEINVWS 122

Query: 122 PFLVGNAVPISPYNGAALNQDQAVGTVQLSIKLDGRVRFKVGTFISGRYHLNVDCPAAIM 181
           P + G A+P++PYN  ALNQDQ+ GTV L IK+DGRVRFKVGTFISG+YHL V CPA I 
Sbjct: 123 PNIYGTAIPVAPYNAIALNQDQSAGTVLLMIKMDGRVRFKVGTFISGKYHLYVRCPAYIQ 182

Query: 182 FGNPTAGIIVGNNAVKYQLVRPCSVSV 209
           FG+ TAGIIVG N+VKY L+  CSVS+
Sbjct: 183 FGSRTAGIIVGENSVKYSLLVSCSVSI 209

The following BLAST results are available for this feature:
BLAST of Cla008398 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NHL12_ARATH1.1e-6255.77NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1[more]
YLS9_ARATH6.1e-1833.54Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1[more]
NHL3_ARATH3.7e-1528.65NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1[more]
BLAST of Cla008398 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF12_CUCSA4.5e-10892.79Uncharacterized protein OS=Cucumis sativus GN=Csa_6G454475 PE=4 SV=1[more]
B9IIM8_POPTR8.7e-8068.12Harpin-induced family protein OS=Populus trichocarpa GN=POPTR_0016s07220g PE=4 S... [more]
A0A067KJ19_JATCU4.3e-7966.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08771 PE=4 SV=1[more]
B9T2S2_RICCO1.5e-7664.25Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0437510 PE=4 SV=1[more]
U5GE91_POPTR2.0e-7664.56Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s22060g PE=4 SV=1[more]
BLAST of Cla008398 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125306|ref|XP_008462618.1|3.6e-11195.67PREDICTED: protein YLS9-like [Cucumis melo][more]
gi|449451173|ref|XP_004143336.1|6.4e-10892.79PREDICTED: protein YLS9 [Cucumis sativus][more]
gi|743898624|ref|XP_011042605.1|3.3e-8068.12PREDICTED: protein YLS9-like [Populus euphratica][more]
gi|224138358|ref|XP_002322794.1|1.3e-7968.12harpin-induced family protein [Populus trichocarpa][more]
gi|802611158|ref|XP_012074337.1|6.2e-7966.67PREDICTED: protein YLS9-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006952 defense response
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016020 membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0004871 signal transducer activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU14331watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU25439watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU36494watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU44595watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla008398Cla008398.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU36494WMU36494transcribed_cluster
WMU14331WMU14331transcribed_cluster
WMU44595WMU44595transcribed_cluster
WMU25439WMU25439transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 73..176
score: 9.8
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 1..208
score: 2.8E
NoneNo IPR availablePANTHERPTHR31415:SF2LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATEDcoord: 1..208
score: 2.8E