Cla007961 (gene) Watermelon (97103) v1

Overview
NameCla007961
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPre-mRNA-splicing factor cwc24 (AHRD V1 *--- B6K3C8_SCHJY); contains Interpro domain(s) IPR000571 Zinc finger, CCCH-type
LocationChr8 : 4975229 .. 4976411 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGATACAGGTGAAAATCAGCCGCCTGAACAAGGTATTACCCATTTTTGTTTCATCTAATCCCCATTTTCATCATGGGATCTCTTTTTTGTGCTTATAATTTTTTAATTGTAGTCACTCTCTCTATACGTTTTTAATCCTGTGTTCTTCAGTCTGTAGCTTCTTCAGAAAACCCACAAAGAACAAAAACATCAGAAAACGGACGGTTGATGAAGACGAAGAAGATGACTCTAAAACCGAGACTTCGTTGCTTCAAAATCAGAAGAAAGCCCCCAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGACCTTCTAAGAGTTCCTTGTCTAATGAGTCGAATGTGGAACCTGATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATTCGCGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGTAAAGGCAAGAGTTCTGGTAGTGAGAAGTTGTATAAAGGAGTCAATGCGTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCACTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACCGAGTGATGAAGATGAAGAAGATGCCTTGCCCTTCGCTTGTTTTATTTGTCGGGAGCCTTTTGTGGATCCTGTTGTGACCAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTTAAGGTAGTTGCTCTTTCTTGGTCTTACTTGTGTCTTAATTATCTAGGCGTCTTTAATATGGTGATCATGAAGTCCTTTCTTTTCTGGGAGATTGAAATTTGCTTCAGAATTCAAGCCTTGTCTCTTTGTTCTTTGAAATTGACTTACAATAGCATGTTTTCTATAGTAATAAGTCAACTTATGATGTTTTTTGAAATTTAG

mRNA sequence

ATGGCAGATACAGGTGAAAATCAGCCGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACAAAGAACAAAAACATCAGAAAACGGACGGTTGATGAAGACGAAGAAGATGACTCTAAAACCGAGACTTCGTTGCTTCAAAATCAGAAGAAAGCCCCCAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGACCTTCTAAGAGTTCCTTGTCTAATGAGTCGAATGTGGAACCTGATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATTCGCGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGTAAAGGCAAGAGTTCTGGTAGTGAGAAGTTGTATAAAGGAGTCAATGCGTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCACTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACCGAGTGATGAAGATGAAGAAGATGCCTTGCCCTTCGCTTGTTTTATTTGTCGGGAGCCTTTTGTGGATCCTGTTGTGACCAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTTAAGGTAGTTGCTCTTTCTTGGTCTTACTTGTGTCTTAATTATCTAGGCGTCTTTAATATGGTGATCATGAAGTCCTTTCTTTTCTGGGAGATTGAAATTTGCTTCAGAATTCAAGCCTTGTCTCTTTGTTCTTTGAAATTGACTTACAATAGCATGTTTTCTATAGTAATAAGTCAACTTATGATGTTTTTTGAAATTTAG

Coding sequence (CDS)

ATGGCAGATACAGGTGAAAATCAGCCGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACAAAGAACAAAAACATCAGAAAACGGACGGTTGATGAAGACGAAGAAGATGACTCTAAAACCGAGACTTCGTTGCTTCAAAATCAGAAGAAAGCCCCCAAGACTGAAAGCAAGCTTTATTTTTCTTCTGGACCTTCTAAGAGTTCCTTGTCTAATGAGTCGAATGTGGAACCTGATAAACCAATTTTCCAATTTGAGTCTTCAAAGGAAATTCAAGTTCACCATGATAGCAGAGCAACTGCAACTCTAGAAACAGAGACTGATTTCTCAAGAGATGCACGAGCCATTCGCGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTTTGAAGGGTAAAGGCAAGAGTTCTGGTAGTGAGAAGTTGTATAAAGGAGTCAATGCGTATGTTGATTACAAGGCTGGCTTCAGAAGGGAACATACAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCCACTTAGAGCTTCTGCTCATATAAGAGCTTCAGCAAGATTTGATTATCAGCCTGATATTTGCAAGGATTACAAGGAGACTGGTTACTGTGGTTATGGAGATGCATGCAAGTTTATGCATGACCGAGGGGATTACAAGTCTGGGTGGCAGTTGGAAAAGGAATGGGAGGAAGTAGAGAAAGCAAGGAAGAGAAAATTAGCTATGAAATCTGATGATGGGGATGAGGATACTTCAGAACCGAGTGATGAAGATGAAGAAGATGCCTTGCCCTTCGCTTGTTTTATTTGTCGGGAGCCTTTTGTGGATCCTGTTGTGACCAAGTGCAAGCATTACTTCTGTGAGCATTGTGCACTTAAGGTAGTTGCTCTTTCTTGGTCTTACTTGTGTCTTAATTATCTAGGCGTCTTTAATATGGTGATCATGAAGTCCTTTCTTTTCTGGGAGATTGAAATTTGCTTCAGAATTCAAGCCTTGTCTCTTTGTTCTTTGAAATTGACTTACAATAGCATGTTTTCTATAGTAATAAGTCAACTTATGATGTTTTTTGAAATTTAG

Protein sequence

MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLYFSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCLNYLGVFNMVIMKSFLFWEIEICFRIQALSLCSLKLTYNSMFSIVISQLMMFFEI
Homology
[Close]
BLAST of Cla007961 vs. Swiss-Prot
Match: C3H1_ARATH (Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana GN=At1g01350 PE=2 SV=2)

HSP 1 Score: 441.0 bits (1133), Expect = 1.2e-122
Identity = 218/326 (66.87%), Postives = 255/326 (78.22%), Query Frame = 1 

Query: 1   MADTGENQPPEQ----------------VCSFFRKPTKNKNIRKRTVDEDEED-DSKTET 60
           M+D+GE +P +Q                VC+FF+KPTK+KNIRKRT+D DEED DSK+E+
Sbjct: 1   MSDSGEPKPSQQEEPLPQPAAQETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSES 60

Query: 61  SLLQNQKKAPKTESKLYFSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATL 120
           S+LQN KK  K +SKLYFSSGPSKSS +      P++ +F ++SSKEIQV +DS ATATL
Sbjct: 61  SILQNLKKVAKPDSKLYFSSGPSKSSTTTSG--APERSVFHYDSSKEIQVQNDSGATATL 120

Query: 121 ETETDFSRDARAIRERVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSE 180
           ETETDF++DARAIRERVLK+A+EALKG  K +  EKLYKG++ Y D+KAGFRRE TISSE
Sbjct: 121 ETETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSE 180

Query: 181 KAGGAHGPLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEK 240
           KAGG+HGPLRASAHIR SARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EK
Sbjct: 181 KAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEK 240

Query: 241 EWEEVEKARKRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFC 300
           EWEE EK RKR  AM  +D D++  + SDED E+ALPFACFICREPFVDPVVTKCKHYFC
Sbjct: 241 EWEEAEKVRKRNKAMGVEDEDDEADKDSDED-ENALPFACFICREPFVDPVVTKCKHYFC 300

Query: 301 EHCALKVVALSWSYLCLNY--LGVFN 308
           EHCALK    +      N   +G+FN
Sbjct: 301 EHCALKHHTKNKKCFVCNQPTMGIFN 323

[Close]
BLAST of Cla007961 vs. Swiss-Prot
Match: C3H51_ARATH (Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana GN=At5g06420 PE=2 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 1.0e-121
Identity = 211/308 (68.51%), Postives = 247/308 (80.19%), Query Frame = 1 

Query: 3   DTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEED-DSKTETSLLQNQKKAPKTESKLYF 62
           D   NQ  +QVC+FF+KPTK+KNIRKRT+D DEED DSK+E+S+LQN KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 63  SSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVL 122
           SSGPS       ++  P++P+F ++SSKEIQV +DS ATATLETETDF++DARAIRERVL
Sbjct: 117 SSGPS-----TRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 123 KQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRAS 182
           K+A+ ALKG  K +  EKLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 236

Query: 183 ARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSD 242
           ARFDYQPDICKDYKETGYCGYGD+CKF+HDRGDYK GWQ+EKEWEE EK RKR  AM  +
Sbjct: 237 ARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKRNKAMGVE 296

Query: 243 DGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCLN 302
           D D++  + SDED E+ALPFACFICREPF+DPVVTKCKHYFCEHCALK    +      N
Sbjct: 297 DDDDEADKDSDED-ENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKNKKCFVCN 356

Query: 303 Y--LGVFN 308
              +G+FN
Sbjct: 357 QPTMGIFN 358

[Close]
BLAST of Cla007961 vs. Swiss-Prot
Match: C3H15_ORYSJ (Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica GN=Os02g0301000 PE=2 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 4.6e-106
Identity = 202/319 (63.32%), Postives = 230/319 (72.10%), Query Frame = 1 

Query: 2   ADTGENQPPEQVCSFFRKPTKNKNIRKRTV-----DEDEEDDSKTETSLLQNQKKAPKTE 61
           A +G + P   VCSF RKP KN  IRKR       D+D+ED S    +     KKAP + 
Sbjct: 10  AGSGGSAP---VCSFVRKPPKN--IRKRPTAPAGSDDDDEDGSGAIAAA--RAKKAPSST 69

Query: 62  SKLYFSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAI 121
           SKL+FSS    S        EP +  FQ+ESS+ IQ   DSRATATLETET+F RDARAI
Sbjct: 70  SKLFFSSADGSS--------EPRR--FQYESSRTIQASTDSRATATLETETEFDRDARAI 129

Query: 122 RERVLKQAEEALK------GKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHG 181
           RER LKQAEE+LK           SGS ++YKG++ Y DYKAGFRREHT+SSEKAGG+HG
Sbjct: 130 RERQLKQAEESLKKNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREHTVSSEKAGGSHG 189

Query: 182 PLRASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEK 241
           PLRASAHIR SARFDYQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQ+EKEWEE EK
Sbjct: 190 PLRASAHIRLSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQIEKEWEEAEK 249

Query: 242 ARKRKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKV 301
           ARKR++AM  D  D +  E  D+D+E+ALPFAC+ICREPFVDPVVTKCKHYFCEHCALK 
Sbjct: 250 ARKRRIAMGGDGSDYEAGEEDDDDDEEALPFACYICREPFVDPVVTKCKHYFCEHCALKH 309

Query: 302 VALSWSYLCLN--YLGVFN 308
            + +      N   LG+FN
Sbjct: 310 HSKNKKCFVCNKPTLGIFN 311

[Close]
BLAST of Cla007961 vs. Swiss-Prot
Match: R113A_BOVIN (RING finger protein 113A OS=Bos taurus GN=RNF113A PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.2e-47
Identity = 113/296 (38.18%), Postives = 166/296 (56.08%), Query Frame = 1 

Query: 11  EQVCSF-FRKPTKN--KNIRKRTVDEDEEDDSKTET----SLLQNQKKAPKTESKLYFSS 70
           +QVC+F F+KP +      RKR +   E  DS + +    ++++ +KK       +  + 
Sbjct: 12  DQVCTFLFKKPGRKVAAGRRKRPICNQESGDSSSSSDEGNTVVRPEKKRAVHNPMIQKTR 71

Query: 71  GPSKSSLS---------NESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDAR 130
           G  K  ++          E+  E    +++   S +     D  ATA  E +T+  RDA+
Sbjct: 72  GSGKQKVAYGDLSSEEEEENKSESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAH-GPLR 190
           AI ER  K  EE L+G+      +K+Y+G+N Y  +     ++ ++ +  +G    GP+R
Sbjct: 132 AIFERSQKIQEE-LRGQE----DDKIYRGINNYQKFMKP--KDTSMGNASSGMVRKGPIR 191

Query: 191 ASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARK 250
           A  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E      
Sbjct: 192 APEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVY 251

Query: 251 RKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 290
                     DE+    SDE+E   +PF CFICR+ F +PVVTKC+HYFCE CAL+
Sbjct: 252 E---------DENYEVGSDEEE---IPFKCFICRQTFQNPVVTKCRHYFCESCALQ 288

[Close]
BLAST of Cla007961 vs. Swiss-Prot
Match: R113A_HUMAN (RING finger protein 113A OS=Homo sapiens GN=RNF113A PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.4e-46
Identity = 115/296 (38.85%), Postives = 170/296 (57.43%), Query Frame = 1 

Query: 11  EQVCSF-FRKPTKN--KNIRKRTVDEDEEDDSKTET----SLLQNQKKAPKTESKLYFS- 70
           +QVC+F F+KP +      RKR   + E  +S + +    ++++ +KK       +  + 
Sbjct: 12  DQVCTFLFKKPGRKGAAGRRKRPACDPEPGESGSSSDEGCTVVRPEKKRVTHNPMIQKTR 71

Query: 71  -SGPSKS-----SLSNESNVEPDKPIFQFESSKEIQV--HHDSRATATLETETDFSRDAR 130
            SG  K+     S   E   EP+     ++S++  +     D  ATA  E +T+  RDA+
Sbjct: 72  DSGKQKAAYGDLSSEEEEENEPESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQ 131

Query: 131 AIRERVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAH-GPLR 190
           AI ER  K  EE L+GK      +K+Y+G+N Y  Y     ++ ++ +  +G    GP+R
Sbjct: 132 AIFERSQKIQEE-LRGKE----DDKIYRGINNYQKYMKP--KDTSMGNASSGMVRKGPIR 191

Query: 191 ASAHIRASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARK 250
           A  H+RA+ R+DYQPDICKDYKETG+CG+GD+CKF+HDR DYK GWQ+E+E +E      
Sbjct: 192 APEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDE------ 251

Query: 251 RKLAMKSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK 290
                +    +++  E   +DEE  +PF CFICR+ F +PVVTKC+HYFCE CAL+
Sbjct: 252 ----GRYGVYEDENYEVGSDDEE--IPFKCFICRQSFQNPVVTKCRHYFCESCALQ 288

[Close]
BLAST of Cla007961 vs. TrEMBL
Match: A0A061EKN3_THECC (Zinc finger family protein OS=Theobroma cacao GN=TCM_020255 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.5e-132
Identity = 229/304 (75.33%), Postives = 261/304 (85.86%), Query Frame = 1 

Query: 6   ENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLYFSSGP 65
           E Q  EQVC+FFRKPTK KNIRKRT++EDE++DS+ ETSLLQN KK  K ++KLYFS+GP
Sbjct: 20  EPQQSEQVCNFFRKPTKGKNIRKRTINEDEDEDSRNETSLLQNHKKTLKPDNKLYFSTGP 79

Query: 66  SKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAE 125
           SKS+ + ESN+E DKPIFQFESSKEIQVH+DSRATATLETET+ ++DARAIRE+VLKQ+E
Sbjct: 80  SKSAAATESNIESDKPIFQFESSKEIQVHNDSRATATLETETEVTKDARAIREKVLKQSE 139

Query: 126 EALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFD 185
           E LKGK  SSG EKLYKG++ YVD+KAGFRRE TI+SEKAGG+HGPLRASAHIR SARFD
Sbjct: 140 EVLKGKSTSSGGEKLYKGMHGYVDHKAGFRREQTIASEKAGGSHGPLRASAHIRVSARFD 199

Query: 186 YQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDE 245
           YQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQLEKEWEE EKARKR LA+  DD D 
Sbjct: 200 YQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWEEAEKARKRNLALGGDDDDG 259

Query: 246 DTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCLNY--L 305
                SD+D++D+LPFACFICR+PFVDPVVTKCKHYFCEHCALK  A +      N   L
Sbjct: 260 AGLNQSDDDDDDSLPFACFICRQPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTL 319

Query: 306 GVFN 308
           G+FN
Sbjct: 320 GIFN 323

[Close]
BLAST of Cla007961 vs. TrEMBL
Match: A0A059CFF1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01238 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 5.8e-132
Identity = 228/310 (73.55%), Postives = 262/310 (84.52%), Query Frame = 1 

Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           + +TG+ Q  EQVCSFFRKP++NKNIRKR V+ED+++DSKTE++ L NQKK  +T +KLY
Sbjct: 15  LEETGDKQTSEQVCSFFRKPSRNKNIRKRMVEEDDDEDSKTESAALHNQKKPQRTGNKLY 74

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FS+G SKSS+S ES V+ DKPIFQFESSKEIQV HDSRATATLETET+FS+DARAIRERV
Sbjct: 75  FSTGSSKSSVSAESKVDSDKPIFQFESSKEIQVEHDSRATATLETETEFSKDARAIRERV 134

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQA   + GK K +G EKLYKGV+ Y DYKAGFRRE TISSEKAGGAHGPLRASAHIR 
Sbjct: 135 LKQATNEISGKSKGTGDEKLYKGVHGYTDYKAGFRREQTISSEKAGGAHGPLRASAHIRV 194

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEW+E EKARKR LA+  
Sbjct: 195 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWDEAEKARKRNLALGG 254

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCL 300
           +D DE+  + ++++E+D LPFACFICREPFVDPVVTKCKHYFCEHCALK  A +      
Sbjct: 255 NDEDEEDVDQTEDEEDDELPFACFICREPFVDPVVTKCKHYFCEHCALKHHARNKKCFVC 314

Query: 301 N--YLGVFNM 309
           N   +G FN+
Sbjct: 315 NKPTMGTFNV 324

[Close]
BLAST of Cla007961 vs. TrEMBL
Match: A0A059CEL1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01238 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 5.8e-132
Identity = 228/310 (73.55%), Postives = 262/310 (84.52%), Query Frame = 1 

Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           + +TG+ Q  EQVCSFFRKP++NKNIRKR V+ED+++DSKTE++ L NQKK  +T +KLY
Sbjct: 15  LEETGDKQTSEQVCSFFRKPSRNKNIRKRMVEEDDDEDSKTESAALHNQKKPQRTGNKLY 74

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FS+G SKSS+S ES V+ DKPIFQFESSKEIQV HDSRATATLETET+FS+DARAIRERV
Sbjct: 75  FSTGSSKSSVSAESKVDSDKPIFQFESSKEIQVEHDSRATATLETETEFSKDARAIRERV 134

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQA   + GK K +G EKLYKGV+ Y DYKAGFRRE TISSEKAGGAHGPLRASAHIR 
Sbjct: 135 LKQATNEISGKSKGTGDEKLYKGVHGYTDYKAGFRREQTISSEKAGGAHGPLRASAHIRV 194

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEW+E EKARKR LA+  
Sbjct: 195 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWDEAEKARKRNLALGG 254

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCL 300
           +D DE+  + ++++E+D LPFACFICREPFVDPVVTKCKHYFCEHCALK  A +      
Sbjct: 255 NDEDEEDVDQTEDEEDDELPFACFICREPFVDPVVTKCKHYFCEHCALKHHARNKKCFVC 314

Query: 301 N--YLGVFNM 309
           N   +G FN+
Sbjct: 315 NKPTMGTFNV 324

[Close]
BLAST of Cla007961 vs. TrEMBL
Match: B9S849_RICCO (RING finger protein 113A, putative OS=Ricinus communis GN=RCOM_0693420 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 5.8e-132
Identity = 233/311 (74.92%), Postives = 264/311 (84.89%), Query Frame = 1 

Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDD-SKTETSLLQNQKKAPKTESKL 60
           MAD+G+++ PE VC+FFRKP KNKNIRKRT+++DEEDD SKTE+SLL NQKKAPK ++KL
Sbjct: 1   MADSGQSEQPEPVCNFFRKPLKNKNIRKRTIEKDEEDDNSKTESSLLHNQKKAPKPDNKL 60

Query: 61  YFSSGPSKSSLSN-ESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRE 120
           YFS+GPSK+SLS  ES VE D+P+FQFESSKEIQV HDSRATATLETET+FS+DARAIRE
Sbjct: 61  YFSTGPSKNSLSAAESVVESDRPVFQFESSKEIQVQHDSRATATLETETEFSKDARAIRE 120

Query: 121 RVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHI 180
           R LKQAEEALKGK  SSG  KLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHI
Sbjct: 121 RALKQAEEALKGKTLSSGDAKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHI 180

Query: 181 RASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM 240
           R SARFDYQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQLEKEW+E EK RKR LA+
Sbjct: 181 RVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRNLAL 240

Query: 241 KSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYL 300
              +G    +E  D+D+E  LPFACFICR+PFVDPV TKCKHYFCEHCALK  A +    
Sbjct: 241 GELEGGTGENEEEDDDDEHELPFACFICRQPFVDPVTTKCKHYFCEHCALKHHAKNKKCF 300

Query: 301 CLNY--LGVFN 308
             N   LG+FN
Sbjct: 301 VCNQPTLGIFN 311

[Close]
BLAST of Cla007961 vs. TrEMBL
Match: D7UCN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g01030 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 8.3e-131
Identity = 232/307 (75.57%), Postives = 258/307 (84.04%), Query Frame = 1 

Query: 3   DTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLYFS 62
           DTGE Q  E VC+FFRKPTKNKNIRKRT DEDE +DSKT TS+L  QKK PK ++KLYFS
Sbjct: 14  DTGEKQQSEPVCNFFRKPTKNKNIRKRTHDEDENEDSKTGTSVLHQQKKPPKPDNKLYFS 73

Query: 63  SGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLK 122
           +G S+ S  +E N E + PIFQFESSKEIQV HDSRATATLETETDFSRDARAIRERVLK
Sbjct: 74  TGSSRKSTMDEPNKESE-PIFQFESSKEIQVQHDSRATATLETETDFSRDARAIRERVLK 133

Query: 123 QAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASA 182
           Q+++ALKGK KS   EKLYKG++ Y DYKAGFRRE T++SEKAGGAHGPLRASAHIRASA
Sbjct: 134 QSQDALKGKNKSD--EKLYKGIHGYTDYKAGFRREQTVASEKAGGAHGPLRASAHIRASA 193

Query: 183 RFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDD 242
           RFDYQPDICKDYKETGYCG+GDACKFMHDRGDYKSGWQ+EKEWEE EKARKR LAM  DD
Sbjct: 194 RFDYQPDICKDYKETGYCGFGDACKFMHDRGDYKSGWQMEKEWEEAEKARKRNLAMGGDD 253

Query: 243 GDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCLNY 302
            DE     SDED++DALPFACFICR+PFVDPVVTKCKH+FCEHCAL+  + +      N 
Sbjct: 254 ADEGGGGQSDEDDDDALPFACFICRQPFVDPVVTKCKHFFCEHCALRHHSKNKKCFVCNQ 313

Query: 303 --LGVFN 308
             LG+FN
Sbjct: 314 PTLGMFN 317

[Close]
BLAST of Cla007961 vs. NCBI nr
Match: gi|449463408|ref|XP_004149426.1| (PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 575.9 bits (1483), Expect = 5.0e-161
Identity = 282/309 (91.26%), Postives = 288/309 (93.20%), Query Frame = 1 

Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTG+ QP EQVCSFFRKPTKNKNIRKRTVDEDEE+DSK ETS L NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK+S SNESNVEP+KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCL 300
           DDGDEDTSE SDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALK  A +      
Sbjct: 241 DDGDEDTSEQSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NY--LGVFN 308
           N   LG+FN
Sbjct: 301 NQPTLGIFN 309

[Close]
BLAST of Cla007961 vs. NCBI nr
Match: gi|659133482|ref|XP_008466746.1| (PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 571.2 bits (1471), Expect = 1.2e-159
Identity = 280/309 (90.61%), Postives = 287/309 (92.88%), Query Frame = 1 

Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           M DTG+ QP EQVCSFFRKPTKNKNIRKRTVDEDEE+DSK ETS L NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FSSGPSK+SLSNESNVEP+KPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQAEEALKGKGKSSG EKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS
Sbjct: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCL 300
           DDGDED+SE SDEDEE ALPFACFICREPFVDPVVTKC HYFCEHCALK  A +      
Sbjct: 241 DDGDEDSSEQSDEDEEGALPFACFICREPFVDPVVTKCGHYFCEHCALKHHAKNKKCFVC 300

Query: 301 NY--LGVFN 308
           N   LG+FN
Sbjct: 301 NQPTLGIFN 309

[Close]
BLAST of Cla007961 vs. NCBI nr
Match: gi|590656389|ref|XP_007034257.1| (Zinc finger family protein [Theobroma cacao])

HSP 1 Score: 480.7 bits (1236), Expect = 2.2e-132
Identity = 229/304 (75.33%), Postives = 261/304 (85.86%), Query Frame = 1 

Query: 6   ENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLYFSSGP 65
           E Q  EQVC+FFRKPTK KNIRKRT++EDE++DS+ ETSLLQN KK  K ++KLYFS+GP
Sbjct: 20  EPQQSEQVCNFFRKPTKGKNIRKRTINEDEDEDSRNETSLLQNHKKTLKPDNKLYFSTGP 79

Query: 66  SKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERVLKQAE 125
           SKS+ + ESN+E DKPIFQFESSKEIQVH+DSRATATLETET+ ++DARAIRE+VLKQ+E
Sbjct: 80  SKSAAATESNIESDKPIFQFESSKEIQVHNDSRATATLETETEVTKDARAIREKVLKQSE 139

Query: 126 EALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRASARFD 185
           E LKGK  SSG EKLYKG++ YVD+KAGFRRE TI+SEKAGG+HGPLRASAHIR SARFD
Sbjct: 140 EVLKGKSTSSGGEKLYKGMHGYVDHKAGFRREQTIASEKAGGSHGPLRASAHIRVSARFD 199

Query: 186 YQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKSDDGDE 245
           YQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQLEKEWEE EKARKR LA+  DD D 
Sbjct: 200 YQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWEEAEKARKRNLALGGDDDDG 259

Query: 246 DTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCLNY--L 305
                SD+D++D+LPFACFICR+PFVDPVVTKCKHYFCEHCALK  A +      N   L
Sbjct: 260 AGLNQSDDDDDDSLPFACFICRQPFVDPVVTKCKHYFCEHCALKHHAKNKKCFVCNQPTL 319

Query: 306 GVFN 308
           G+FN
Sbjct: 320 GIFN 323

[Close]
BLAST of Cla007961 vs. NCBI nr
Match: gi|629111933|gb|KCW76893.1| (hypothetical protein EUGRSUZ_D01238 [Eucalyptus grandis])

HSP 1 Score: 478.8 bits (1231), Expect = 8.3e-132
Identity = 228/310 (73.55%), Postives = 262/310 (84.52%), Query Frame = 1 

Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDDSKTETSLLQNQKKAPKTESKLY 60
           + +TG+ Q  EQVCSFFRKP++NKNIRKR V+ED+++DSKTE++ L NQKK  +T +KLY
Sbjct: 15  LEETGDKQTSEQVCSFFRKPSRNKNIRKRMVEEDDDEDSKTESAALHNQKKPQRTGNKLY 74

Query: 61  FSSGPSKSSLSNESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120
           FS+G SKSS+S ES V+ DKPIFQFESSKEIQV HDSRATATLETET+FS+DARAIRERV
Sbjct: 75  FSTGSSKSSVSAESKVDSDKPIFQFESSKEIQVEHDSRATATLETETEFSKDARAIRERV 134

Query: 121 LKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180
           LKQA   + GK K +G EKLYKGV+ Y DYKAGFRRE TISSEKAGGAHGPLRASAHIR 
Sbjct: 135 LKQATNEISGKSKGTGDEKLYKGVHGYTDYKAGFRREQTISSEKAGGAHGPLRASAHIRV 194

Query: 181 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAMKS 240
           SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEW+E EKARKR LA+  
Sbjct: 195 SARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWDEAEKARKRNLALGG 254

Query: 241 DDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYLCL 300
           +D DE+  + ++++E+D LPFACFICREPFVDPVVTKCKHYFCEHCALK  A +      
Sbjct: 255 NDEDEEDVDQTEDEEDDELPFACFICREPFVDPVVTKCKHYFCEHCALKHHARNKKCFVC 314

Query: 301 N--YLGVFNM 309
           N   +G FN+
Sbjct: 315 NKPTMGTFNV 324

[Close]
BLAST of Cla007961 vs. NCBI nr
Match: gi|255562324|ref|XP_002522169.1| (PREDICTED: zinc finger CCCH domain-containing protein 1 [Ricinus communis])

HSP 1 Score: 478.8 bits (1231), Expect = 8.3e-132
Identity = 233/311 (74.92%), Postives = 264/311 (84.89%), Query Frame = 1 

Query: 1   MADTGENQPPEQVCSFFRKPTKNKNIRKRTVDEDEEDD-SKTETSLLQNQKKAPKTESKL 60
           MAD+G+++ PE VC+FFRKP KNKNIRKRT+++DEEDD SKTE+SLL NQKKAPK ++KL
Sbjct: 1   MADSGQSEQPEPVCNFFRKPLKNKNIRKRTIEKDEEDDNSKTESSLLHNQKKAPKPDNKL 60

Query: 61  YFSSGPSKSSLSN-ESNVEPDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRE 120
           YFS+GPSK+SLS  ES VE D+P+FQFESSKEIQV HDSRATATLETET+FS+DARAIRE
Sbjct: 61  YFSTGPSKNSLSAAESVVESDRPVFQFESSKEIQVQHDSRATATLETETEFSKDARAIRE 120

Query: 121 RVLKQAEEALKGKGKSSGSEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHI 180
           R LKQAEEALKGK  SSG  KLYKG++ Y D+KAGFRRE TISSEKAGG+HGPLRASAHI
Sbjct: 121 RALKQAEEALKGKTLSSGDAKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHI 180

Query: 181 RASARFDYQPDICKDYKETGYCGYGDACKFMHDRGDYKSGWQLEKEWEEVEKARKRKLAM 240
           R SARFDYQPDICKDYKETGYCGYGD+CKFMHDRGDYKSGWQLEKEW+E EK RKR LA+
Sbjct: 181 RVSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQLEKEWDEAEKIRKRNLAL 240

Query: 241 KSDDGDEDTSEPSDEDEEDALPFACFICREPFVDPVVTKCKHYFCEHCALKVVALSWSYL 300
              +G    +E  D+D+E  LPFACFICR+PFVDPV TKCKHYFCEHCALK  A +    
Sbjct: 241 GELEGGTGENEEEDDDDEHELPFACFICRQPFVDPVTTKCKHYFCEHCALKHHAKNKKCF 300

Query: 301 CLNY--LGVFN 308
             N   LG+FN
Sbjct: 301 VCNQPTLGIFN 311

The following BLAST results are available for this feature:
BLAST of Cla007961 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H1_ARATH1.2e-12266.87Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana GN=At1g0135... [more]
C3H51_ARATH1.0e-12168.51Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana GN=At5g064... [more]
C3H15_ORYSJ4.6e-10663.32Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica GN... [more]
R113A_BOVIN8.2e-4738.18RING finger protein 113A OS=Bos taurus GN=RNF113A PE=2 SV=1[more]
R113A_HUMAN2.4e-4638.85RING finger protein 113A OS=Homo sapiens GN=RNF113A PE=1 SV=1[more]
BLAST of Cla007961 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061EKN3_THECC1.5e-13275.33Zinc finger family protein OS=Theobroma cacao GN=TCM_020255 PE=4 SV=1[more]
A0A059CFF1_EUCGR5.8e-13273.55Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01238 PE=4 SV=1[more]
A0A059CEL1_EUCGR5.8e-13273.55Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01238 PE=4 SV=1[more]
B9S849_RICCO5.8e-13274.92RING finger protein 113A, putative OS=Ricinus communis GN=RCOM_0693420 PE=4 SV=1[more]
D7UCN8_VITVI8.3e-13175.57Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g01030 PE=4 SV=... [more]
BLAST of Cla007961 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449463408|ref|XP_004149426.1|5.0e-16191.26PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis sativus][more]
gi|659133482|ref|XP_008466746.1|1.2e-15990.61PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo][more]
gi|590656389|ref|XP_007034257.1|2.2e-13275.33Zinc finger family protein [Theobroma cacao][more]
gi|629111933|gb|KCW76893.1|8.3e-13273.55hypothetical protein EUGRSUZ_D01238 [Eucalyptus grandis][more]
gi|255562324|ref|XP_002522169.1|8.3e-13274.92PREDICTED: zinc finger CCCH domain-containing protein 1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR018957Znf_C3HC4_RING-type
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003677 DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU10740watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU40350watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla007961Cla007961.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU10740WMU10740transcribed_cluster
WMU40350WMU40350transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 186..216
score: 4.4
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 186..211
score: 6.5
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 185..212
score: 1.
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 185..213
score: 14
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 184..216
score: 3.7
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 263..299
score: 0.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 263..299
score:
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 248..292
score: 2.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 278..287
scor
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 263..292
score: 2.
NoneNo IPR availablePANTHERPTHR12930ZINC FINGER PROTEIN 183coord: 1..289
score: 2.5E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 262..294
score: 2.78