Cla007800 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007800
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Plant-specific domain TIGR01615 family protein (AHRD V1 -- B6UDN7_MAIZE); contains Interpro domain(s) IPR006502 Protein of unknown function DUF506, plant
Location	Chr2 : 1457032 .. 1458276 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCACTTGAGAAGCTGGAAAAGACATGCTCCCAAAACCAAGACTAGCAGCCTCAAGAAATGGCTTGTGATGAAGCTCAAAATGGACGGCTATGATTCTTCTGATCTTTGTCATACCTCTTGGGTCACTTCCATGGGCTGCCCAGCAGGTGAGATTATCATTCTCTCTCTCACCTTAACAACGCTTCTGAATTTTTTCCTCAATTATATAAACAGCCTATCATTTTTTTTTTTTTTTGAAAATTTATCTTAAATGGTAAAATTATTAAAAATATTTATAATTATAATAAAATACACCGAAAAAATTTGGTATATTTATAAATATTTTAGTTACTTTTACTATATTTGAAAAGAATTTTTTTTTTCAACACTCAATAAAATAATTTTTTAATTTTTTTTAAAAAATAAATCATCATGTGACAAATTTTAATTGGGTATAGTAAAAGTTGCACAATAGATGGGTATAGCACCCAAATTTTTTCATGATATAATATCTTATTTAGTTTTACTAAAATAACTTTTATTAGGTCAAAATACCATGTTAGGTACTCTATTGTTTAGAATTTTTCTAATTTTAGTTTATATATTTTAAAATGTTTAATTTTAAATAGTTTATTGTGAATTTTCATTAAAAATAAATATTGAAAATATATCTACCTATAATCATGAAAATTATTATTATTATTATTTAACTAATTTAGATAAAAGTTAACTTTTTGATAAACTAAATTTAAGATTTATTAAGAATATTTTTAATATTTGTTTTGGGGATTTGAATTGATTAGGGGACTATGAGTACATAGACATGAAAGTGAAGGATGAGTATGGGAATGTTGAGAGGCTGATAATAGACATAGAGTTCAAAGCTCAATTTGAAGTAGCAAGAGCAACAGAAAGCTACAAGCAGCTCATAGAAGCACTTCCATCAGTGTTTGTAGGAAGTGAAGAGAAAGTTAAGAGAATAATCTCAATTTTATGCTCAGCAGCCAAACAGTCCCTTAAGGAAAGTGGGCTCCACATACCTCCTTGGAGAACTTCCACTTACATGCATTGCAAATGGCTTCCCTCTATATCTAATAATCATAATATTAGAGAAAATAATTATAATGGAATAATTAAAGACAATAATTTAAATAATAAGTATTGGAAGCCTCCCATGGTGAAGCAAATTTCGAGGAGGGTTTGGAGTGGTGCCTCTGCCTTATCCACTCAATTTTCTAACATGAGTATTAATTGCTGCTGA

mRNA sequence

ATGAAGCACTTGAGAAGCTGGAAAAGACATGCTCCCAAAACCAAGACTAGCAGCCTCAAGAAATGGCTTGTGATGAAGCTCAAAATGGACGGCTATGATTCTTCTGATCTTTGTCATACCTCTTGGGTCACTTCCATGGGCTGCCCAGCAGGGGACTATGAGTACATAGACATGAAAGTGAAGGATGAGTATGGGAATGTTGAGAGGCTGATAATAGACATAGAGTTCAAAGCTCAATTTGAAGTAGCAAGAGCAACAGAAAGCTACAAGCAGCTCATAGAAGCACTTCCATCAGTGTTTGTAGGAAGTGAAGAGAAAGTTAAGAGAATAATCTCAATTTTATGCTCAGCAGCCAAACAGTCCCTTAAGGAAAGTGGGCTCCACATACCTCCTTGGAGAACTTCCACTTACATGCATTGCAAATGGCTTCCCTCTATATCTAATAATCATAATATTAGAGAAAATAATTATAATGGAATAATTAAAGACAATAATTTAAATAATAAGTATTGGAAGCCTCCCATGGTGAAGCAAATTTCGAGGAGGGTTTGGAGTGGTGCCTCTGCCTTATCCACTCAATTTTCTAACATGAGTATTAATTGCTGCTGA

Coding sequence (CDS)

ATGAAGCACTTGAGAAGCTGGAAAAGACATGCTCCCAAAACCAAGACTAGCAGCCTCAAGAAATGGCTTGTGATGAAGCTCAAAATGGACGGCTATGATTCTTCTGATCTTTGTCATACCTCTTGGGTCACTTCCATGGGCTGCCCAGCAGGGGACTATGAGTACATAGACATGAAAGTGAAGGATGAGTATGGGAATGTTGAGAGGCTGATAATAGACATAGAGTTCAAAGCTCAATTTGAAGTAGCAAGAGCAACAGAAAGCTACAAGCAGCTCATAGAAGCACTTCCATCAGTGTTTGTAGGAAGTGAAGAGAAAGTTAAGAGAATAATCTCAATTTTATGCTCAGCAGCCAAACAGTCCCTTAAGGAAAGTGGGCTCCACATACCTCCTTGGAGAACTTCCACTTACATGCATTGCAAATGGCTTCCCTCTATATCTAATAATCATAATATTAGAGAAAATAATTATAATGGAATAATTAAAGACAATAATTTAAATAATAAGTATTGGAAGCCTCCCATGGTGAAGCAAATTTCGAGGAGGGTTTGGAGTGGTGCCTCTGCCTTATCCACTCAATTTTCTAACATGAGTATTAATTGCTGCTGA

Protein sequence

MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKVKDEYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAKQSLKESGLHIPPWRTSTYMHCKWLPSISNNHNIRENNYNGIIKDNNLNNKYWKPPMVKQISRRVWSGASALSTQFSNMSINCC

Homology

[Close]

BLAST of Cla007800 vs. TrEMBL
Match: A0A0A0LJS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302120 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.8e-67
Identity = 135/189 (71.43%), Postives = 151/189 (79.89%), Query Frame = 1


Query: 1   MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKV 60
           MKHLR WK     +KT+SL+KWLVMKLKMDGYDSS LCHTSWVTSMGCPAGDYEYI+M+ 
Sbjct: 66  MKHLRRWKASDASSKTNSLRKWLVMKLKMDGYDSSHLCHTSWVTSMGCPAGDYEYIEMRT 125

Query: 61  KD-EYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAK 120
           KD E G+ +RLIIDIEFKAQFEVARATE YKQL +ALP+VFVGSEEKVKRIIS+LCSAAK
Sbjct: 126 KDDELGSRKRLIIDIEFKAQFEVARATEEYKQLTKALPTVFVGSEEKVKRIISVLCSAAK 185

Query: 121 QSLKESGLHIPPWRTSTYMHCKW----LPSISNNHN---IRENNYNGIIKDNNLNNK--- 177
           QSL++SGLHIPPWRTSTYMH KW    L   +NNH+   I  N    I++ NN NN    
Sbjct: 186 QSLQKSGLHIPPWRTSTYMHAKWLLLHLDHSTNNHSNYYIPTNININIMRHNNNNNSNNK 245

[Close]

BLAST of Cla007800 vs. TrEMBL
Match: A0A067JQA8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22242 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-56
Identity = 114/201 (56.72%), Postives = 149/201 (74.13%), Query Frame = 1


Query: 1   MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKV 60
           ++H+RS K      K + LKKWLV +L+MDG+++S +C TSW+TS+GCPAGDY YID+ +
Sbjct: 64  LRHMRSQKE---AEKATGLKKWLVTRLQMDGFNAS-ICQTSWLTSLGCPAGDYNYIDIIL 123

Query: 61  KDEYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAKQ 120
           KDE GN +RLI+DI+F++QFE+AR T+SY++L + +PS F+GSEEK+ +IIS+LCSAAKQ
Sbjct: 124 KDEKGNKKRLIVDIDFRSQFELARPTKSYEELTDIVPSFFIGSEEKLNKIISLLCSAAKQ 183

Query: 121 SLKESGLHIPPWRTSTYMHCKWLPSISNNHNIRENNYNGIIKDNNLNNKYWKPPMVKQIS 180
           SL+E GLH+PPWR+STYM  KWL   + N NI     N   KD   NN  W PP+VK   
Sbjct: 184 SLEERGLHVPPWRSSTYMQSKWLKVNAPNTNIGCTKENREAKDGCFNN-IWTPPLVKPRR 243

Query: 181 RRVWSGASALSTQFSNMSINC 202
           R +    SALSTQFSNM INC
Sbjct: 244 RDL---GSALSTQFSNMGINC 256

[Close]

BLAST of Cla007800 vs. TrEMBL
Match: A0A0B0NY12_GOSAR (Fidgetin-like protein 1 OS=Gossypium arboreum GN=F383_08544 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 8.6e-56
Identity = 113/205 (55.12%), Postives = 150/205 (73.17%), Query Frame = 1


Query: 1   MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKV 60
           +KH+RS KR   K+  S LKKWL M+LKM+G+++S LC T WVTS GCPAGDYEY+D+ +
Sbjct: 62  LKHIRS-KRAIQKS--SGLKKWLAMRLKMNGFNAS-LCQTCWVTSSGCPAGDYEYVDIVM 121

Query: 61  KDEYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAKQ 120
           ++E G   RLI+DI+FK+QFE+AR + +YK+L +ALPS+F+GSEEK++ IIS++C AAKQ
Sbjct: 122 ENENGETVRLIVDIDFKSQFELARPSPTYKELTDALPSIFIGSEEKLREIISVVCLAAKQ 181

Query: 121 SLKESGLHIPPWRTSTYMHCKWLPSISN-NHNIRENNYNGIIKDNNLNNKYWKPPMV--K 180
           S +E+GLH+PPWRT+TYMH KWL +  N N    + N     +   L    W PPMV  K
Sbjct: 182 SFREAGLHVPPWRTTTYMHSKWLSATPNVNGGFGKVNGEPKPRGGALGFSKWTPPMVKPK 241

Query: 181 QISRRVWSGASALSTQFSNMSINCC 203
             +R +  G SALS+QFSNM INCC
Sbjct: 242 TQNRELGGGGSALSSQFSNMGINCC 262

[Close]

BLAST of Cla007800 vs. TrEMBL
Match: A0A0D2V127_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G033900 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.9e-55
Identity = 113/205 (55.12%), Postives = 151/205 (73.66%), Query Frame = 1


Query: 1   MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKV 60
           +KH+RS KR   K+  S LKKWL M+LKM+G+++S L  T WVTS GCPAGDYEY+D+ +
Sbjct: 62  LKHIRS-KRDVQKS--SGLKKWLAMRLKMNGFNAS-LRQTCWVTSSGCPAGDYEYVDIVM 121

Query: 61  KDEYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAKQ 120
           ++E G   RLI+DI+FK+QFE+AR + +YK+L +ALPS+F+GSEEK++ IIS++CSAAKQ
Sbjct: 122 ENENGETVRLIVDIDFKSQFELARPSPTYKELTDALPSIFIGSEEKLREIISVVCSAAKQ 181

Query: 121 SLKESGLHIPPWRTSTYMHCKWLPSISN-NHNIRENNYNGIIKDNNLNNKYWKPPMV--K 180
           S +E+GLH+PPWRT+TYMH KWL +  N N +  + N     +   L    W PPMV  K
Sbjct: 182 SFREAGLHVPPWRTTTYMHSKWLSATPNVNGDFGKVNGEPKPRGGALGFSKWTPPMVKPK 241

Query: 181 QISRRVWSGASALSTQFSNMSINCC 203
             +R +  G SALS+QFSNM INCC
Sbjct: 242 TQNRELGGGGSALSSQFSNMGINCC 262

[Close]

BLAST of Cla007800 vs. TrEMBL
Match: A0A061DR92_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_001427 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 5.5e-55
Identity = 114/207 (55.07%), Postives = 147/207 (71.01%), Query Frame = 1


Query: 1   MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKV 60
           +KH++  KR   KT  S LKKWL M+LKM+G+++S  C TSW TS+GCP GDYEYI + V
Sbjct: 91  LKHIKG-KRDVHKT--SGLKKWLAMRLKMNGFNAS-FCQTSWATSLGCPGGDYEYIAIVV 150

Query: 61  KDEYG-NVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAK 120
           ++E G +  RLI+DI+FK+QFE+AR T +YK+L +ALPS+FVGSEEK+ +IIS+LCSAAK
Sbjct: 151 ENENGTDTVRLIVDIDFKSQFELARPTPTYKELTDALPSIFVGSEEKLNKIISVLCSAAK 210

Query: 121 QSLKESGLHIPPWRTSTYMHCKWLPS----ISNNHNIRENNYNGIIKDNNLNNKYWKPPM 180
           QS +E+GLH+PPWRTSTYM  KWL       +NN  +   N     K    +   W PPM
Sbjct: 211 QSFREAGLHVPPWRTSTYMKSKWLSGGHKVAANNAGLGRENREEETKGGAHSFSKWAPPM 270

Query: 181 VKQISRRVWSGASALSTQFSNMSINCC 203
           VK   R +  G SALS+QFS+M INCC
Sbjct: 271 VKAKRRDLGGGGSALSSQFSSMGINCC 293

[Close]

BLAST of Cla007800 vs. NCBI nr
Match: gi|449459234|ref|XP_004147351.1| (PREDICTED: uncharacterized protein LOC101214990 [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 4.1e-67
Identity = 135/189 (71.43%), Postives = 151/189 (79.89%), Query Frame = 1


Query: 1   MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKV 60
           MKHLR WK     +KT+SL+KWLVMKLKMDGYDSS LCHTSWVTSMGCPAGDYEYI+M+ 
Sbjct: 66  MKHLRRWKASDASSKTNSLRKWLVMKLKMDGYDSSHLCHTSWVTSMGCPAGDYEYIEMRT 125

Query: 61  KD-EYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAK 120
           KD E G+ +RLIIDIEFKAQFEVARATE YKQL +ALP+VFVGSEEKVKRIIS+LCSAAK
Sbjct: 126 KDDELGSRKRLIIDIEFKAQFEVARATEEYKQLTKALPTVFVGSEEKVKRIISVLCSAAK 185

Query: 121 QSLKESGLHIPPWRTSTYMHCKW----LPSISNNHN---IRENNYNGIIKDNNLNNK--- 177
           QSL++SGLHIPPWRTSTYMH KW    L   +NNH+   I  N    I++ NN NN    
Sbjct: 186 QSLQKSGLHIPPWRTSTYMHAKWLLLHLDHSTNNHSNYYIPTNININIMRHNNNNNSNNK 245

[Close]

BLAST of Cla007800 vs. NCBI nr
Match: gi|659121960|ref|XP_008460903.1| (PREDICTED: uncharacterized protein LOC103499645 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 6.1e-63
Identity = 134/194 (69.07%), Postives = 148/194 (76.29%), Query Frame = 1


Query: 1   MKHLRSWKRH--APKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDM 60
           MKHLR WK    A  +KT+SL+KWLVMKLKM+GYDSS L HTSWVTSMGCPAGDYEYI+M
Sbjct: 65  MKHLRRWKTSSDANSSKTNSLRKWLVMKLKMEGYDSSHLSHTSWVTSMGCPAGDYEYIEM 124

Query: 61  KVKDEYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAA 120
           ++K E     RLIIDIEFKAQFEVARATE YKQL +ALPSVFVGSEEKVKRIIS+LCSAA
Sbjct: 125 RMKGE-----RLIIDIEFKAQFEVARATEEYKQLTKALPSVFVGSEEKVKRIISVLCSAA 184

Query: 121 KQSLKESGLHIPPWRTSTYMHCKWLPSISNNHNIRENNY---NGI-----------IKDN 177
           KQSLK+SGLHIPPWRTSTYMH KWL    ++H+    NY   N I             +N
Sbjct: 185 KQSLKKSGLHIPPWRTSTYMHAKWLLLHLHHHSNHHINYIPTNDINININISTPNSNNNN 244

[Close]

BLAST of Cla007800 vs. NCBI nr
Match: gi|802726160|ref|XP_012086085.1| (PREDICTED: uncharacterized protein LOC105645165 [Jatropha curcas])

HSP 1 Score: 227.3 bits (578), Expect = 2.5e-56
Identity = 114/201 (56.72%), Postives = 149/201 (74.13%), Query Frame = 1


Query: 1   MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKV 60
           ++H+RS K      K + LKKWLV +L+MDG+++S +C TSW+TS+GCPAGDY YID+ +
Sbjct: 64  LRHMRSQKE---AEKATGLKKWLVTRLQMDGFNAS-ICQTSWLTSLGCPAGDYNYIDIIL 123

Query: 61  KDEYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAKQ 120
           KDE GN +RLI+DI+F++QFE+AR T+SY++L + +PS F+GSEEK+ +IIS+LCSAAKQ
Sbjct: 124 KDEKGNKKRLIVDIDFRSQFELARPTKSYEELTDIVPSFFIGSEEKLNKIISLLCSAAKQ 183

Query: 121 SLKESGLHIPPWRTSTYMHCKWLPSISNNHNIRENNYNGIIKDNNLNNKYWKPPMVKQIS 180
           SL+E GLH+PPWR+STYM  KWL   + N NI     N   KD   NN  W PP+VK   
Sbjct: 184 SLEERGLHVPPWRSSTYMQSKWLKVNAPNTNIGCTKENREAKDGCFNN-IWTPPLVKPRR 243

Query: 181 RRVWSGASALSTQFSNMSINC 202
           R +    SALSTQFSNM INC
Sbjct: 244 RDL---GSALSTQFSNMGINC 256

[Close]

BLAST of Cla007800 vs. NCBI nr
Match: gi|728838262|gb|KHG17705.1| (Fidgetin-like protein 1 [Gossypium arboreum])

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55
Identity = 113/205 (55.12%), Postives = 150/205 (73.17%), Query Frame = 1


Query: 1   MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKV 60
           +KH+RS KR   K+  S LKKWL M+LKM+G+++S LC T WVTS GCPAGDYEY+D+ +
Sbjct: 62  LKHIRS-KRAIQKS--SGLKKWLAMRLKMNGFNAS-LCQTCWVTSSGCPAGDYEYVDIVM 121

Query: 61  KDEYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAKQ 120
           ++E G   RLI+DI+FK+QFE+AR + +YK+L +ALPS+F+GSEEK++ IIS++C AAKQ
Sbjct: 122 ENENGETVRLIVDIDFKSQFELARPSPTYKELTDALPSIFIGSEEKLREIISVVCLAAKQ 181

Query: 121 SLKESGLHIPPWRTSTYMHCKWLPSISN-NHNIRENNYNGIIKDNNLNNKYWKPPMV--K 180
           S +E+GLH+PPWRT+TYMH KWL +  N N    + N     +   L    W PPMV  K
Sbjct: 182 SFREAGLHVPPWRTTTYMHSKWLSATPNVNGGFGKVNGEPKPRGGALGFSKWTPPMVKPK 241

Query: 181 QISRRVWSGASALSTQFSNMSINCC 203
             +R +  G SALS+QFSNM INCC
Sbjct: 242 TQNRELGGGGSALSSQFSNMGINCC 262

[Close]

BLAST of Cla007800 vs. NCBI nr
Match: gi|823256670|ref|XP_012460981.1| (PREDICTED: uncharacterized protein LOC105780973 [Gossypium raimondii])

HSP 1 Score: 223.8 bits (569), Expect = 2.7e-55
Identity = 113/205 (55.12%), Postives = 151/205 (73.66%), Query Frame = 1


Query: 1   MKHLRSWKRHAPKTKTSSLKKWLVMKLKMDGYDSSDLCHTSWVTSMGCPAGDYEYIDMKV 60
           +KH+RS KR   K+  S LKKWL M+LKM+G+++S L  T WVTS GCPAGDYEY+D+ +
Sbjct: 62  LKHIRS-KRDVQKS--SGLKKWLAMRLKMNGFNAS-LRQTCWVTSSGCPAGDYEYVDIVM 121

Query: 61  KDEYGNVERLIIDIEFKAQFEVARATESYKQLIEALPSVFVGSEEKVKRIISILCSAAKQ 120
           ++E G   RLI+DI+FK+QFE+AR + +YK+L +ALPS+F+GSEEK++ IIS++CSAAKQ
Sbjct: 122 ENENGETVRLIVDIDFKSQFELARPSPTYKELTDALPSIFIGSEEKLREIISVVCSAAKQ 181

Query: 121 SLKESGLHIPPWRTSTYMHCKWLPSISN-NHNIRENNYNGIIKDNNLNNKYWKPPMV--K 180
           S +E+GLH+PPWRT+TYMH KWL +  N N +  + N     +   L    W PPMV  K
Sbjct: 182 SFREAGLHVPPWRTTTYMHSKWLSATPNVNGDFGKVNGEPKPRGGALGFSKWTPPMVKPK 241

Query: 181 QISRRVWSGASALSTQFSNMSINCC 203
             +R +  G SALS+QFSNM INCC
Sbjct: 242 TQNRELGGGGSALSSQFSNMGINCC 262

The following BLAST results are available for this feature:

BLAST of Cla007800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJS3_CUCSA	2.8e-67	71.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302120 PE=4 SV=1	[more]
A0A067JQA8_JATCU	1.7e-56	56.72	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22242 PE=4 SV=1	[more]
A0A0B0NY12_GOSAR	8.6e-56	55.12	Fidgetin-like protein 1 OS=Gossypium arboreum GN=F383_08544 PE=4 SV=1	[more]
A0A0D2V127_GOSRA	1.9e-55	55.12	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G033900 PE=4 SV=1	[more]
A0A061DR92_THECC	5.5e-55	55.07	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_001427 PE=4 SV=1	[more]

BLAST of Cla007800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459234\|ref\|XP_004147351.1\|	4.1e-67	71.43	PREDICTED: uncharacterized protein LOC101214990 [Cucumis sativus]	[more]
gi\|659121960\|ref\|XP_008460903.1\|	6.1e-63	69.07	PREDICTED: uncharacterized protein LOC103499645 [Cucumis melo]	[more]
gi\|802726160\|ref\|XP_012086085.1\|	2.5e-56	56.72	PREDICTED: uncharacterized protein LOC105645165 [Jatropha curcas]	[more]
gi\|728838262\|gb\|KHG17705.1\|	1.2e-55	55.12	Fidgetin-like protein 1 [Gossypium arboreum]	[more]
gi\|823256670\|ref\|XP_012460981.1\|	2.7e-55	55.12	PREDICTED: uncharacterized protein LOC105780973 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006502	PDDEXK-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0032774	RNA biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003899	DNA-directed RNA polymerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla007800	Cla007800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006502	Protein of unknown function PDDEXK-like	PANTHER	PTHR31579	FAMILY NOT NAMED	coord: 1..143 score: 2.0
IPR006502	Protein of unknown function PDDEXK-like	PFAM	PF04720	PDDEXK_6	coord: 13..145 score: 3.3
IPR006502	Protein of unknown function PDDEXK-like	TIGRFAMs	TIGR01615	TIGR01615	coord: 21..146 score: 5.0
None	No IPR available	PANTHER	PTHR31579:SF10	SUBFAMILY NOT NAMED	coord: 1..143 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla007800	Cla97C02G026870	Watermelon (97103) v2	wmwmbB324
Cla007800	Csa2G302120	Cucumber (Chinese Long) v2	cuwmB141
Cla007800	MELO3C023255	Melon (DHL92) v3.5.1	mewmB123
Cla007800	ClCG02G000600	Watermelon (Charleston Gray)	wcgwmB206
Cla007800	CSPI02G15620	Wild cucumber (PI 183967)	cpiwmB143
Cla007800	Cucsa.249970	Cucumber (Gy14) v1	cgywmB470
Cla007800	CmaCh02G006240	Cucurbita maxima (Rimu)	cmawmB584
Cla007800	CmoCh02G006280	Cucurbita moschata (Rifu)	cmowmB578
Cla007800	Cp4.1LG05g10670	Cucurbita pepo (Zucchini)	cpewmB746
Cla007800	MELO3C023255.2	Melon (DHL92) v3.6.1	medwmB118
Cla007800	Carg11690	Silver-seed gourd	carwmB1056
Cla007800	CsaV3_2G018170	Cucumber (Chinese Long) v3	cucwmB154
Cla007800	Bhi10G001328	Wax gourd	wgowmB379

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla007800	Silver-seed gourd	carwmB0716
Cla007800	Cucurbita maxima (Rimu)	cmawmB532
Cla007800	Cucurbita moschata (Rifu)	cmowmB521
Cla007800	Cucurbita pepo (Zucchini)	cpewmB288
Cla007800	Cucurbita pepo (Zucchini)	cpewmB302
Cla007800	Bottle gourd (USVL1VR-Ls)	lsiwmB066
Cla007800	Cucumber (Gy14) v2	cgybwmB134
Cla007800	Melon (DHL92) v3.6.1	medwmB128