Csa2G302120 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGAAGAAAAAGAGAGAAAATATATATGGAAAGTTTAGAAGAGGAAAAATTAGTTCAAATGGTTGATGATTTTATCGAATCAGTTGATGATCATCATCAATCACCAACTTCTTCTTCTTTTCGGCCTCTTTCATCCAATTCCAAATCCCATCATTTTTTCACATTAAAGGTATGTGTGTGTGTATGTATGTATGTACGTATATTCAACGACCACTTTTAAATTATAAAAGAAAAGAATGATTAAATTGTTGGGTTTTGCAATATAATTATTATTATGTGTGTAGGAGATTCTTGGGAATGGAACGAAGGAAGAAGAAGAGGTGGGTGAGAGTGTGATGAAACACTTGAGAAGATGGAAAGCATCAGATGCTTCTTCCAAAACCAATAGCCTTAGGAAATGGCTTGTGATGAAGCTCAAAATGGACGGCTATGATTCTTCTCATCTTTGTCATACCTCTTGGGTCACTTCCATGGGCTGCCCAGCAGGTGAACTAGTTTATATCATTCTCTCTCTCTCTCTCACACACACACACCTCAGTAGCACTTCTAATAACCTTAACCTTTTTTGAAAACAGAGATTAATTTAGTAGATTTAGAAATTAAGCCATAAAATAAAGTAGCAAGGTTTTTCGTAGGTATGTGTGATATTTTGATCACTAATTTGTTTTACTTGAATTAATTTGAATTTTGTAATAGGGGATTATGAATACATAGAGATGAGAACGAAGGATGATGAATTAGGGAGCAGAAAGAGATTGATAATAGACATAGAATTCAAAGCACAGTTTGAAGTAGCAAGAGCAACAGAAGAATACAAACAACTCACAAAAGCACTTCCAACAGTGTTTGTAGGAAGTGAAGAGAAAGTGAAGAGAATAATAAGTGTTTTATGTTCAGCAGCCAAGCAATCCCTTCAGAAGAGTGGTCTTCACATTCCACCTTGGAGAACTTCCACTTATATGCATGCCAAATGGCTTCTTCTTCACCTTGATCACTCTACTAATAATCACTCTAATTATTATATCCCTACTAATATTAATATCAATATTATGAGACATAATAATAACAACAACAGTAACAATAAATATTATTATTGGAAGCCTCCAATGGTTAATTATTAACCAATTTTCAAGGAGGTATTCATTTGGGGTTGTGGTG ATGGAAAGTTTAGAAGAGGAAAAATTAGTTCAAATGGTTGATGATTTTATCGAATCAGTTGATGATCATCATCAATCACCAACTTCTTCTTCTTTTCGGCCTCTTTCATCCAATTCCAAATCCCATCATTTTTTCACATTAAAGGAGATTCTTGGGAATGGAACGAAGGAAGAAGAAGAGGTGGGTGAGAGTGTGATGAAACACTTGAGAAGATGGAAAGCATCAGATGCTTCTTCCAAAACCAATAGCCTTAGGAAATGGCTTGTGATGAAGCTCAAAATGGACGGCTATGATTCTTCTCATCTTTGTCATACCTCTTGGGTCACTTCCATGGGCTGCCCAGCAGGGGATTATGAATACATAGAGATGAGAACGAAGGATGATGAATTAGGGAGCAGAAAGAGATTGATAATAGACATAGAATTCAAAGCACAGTTTGAAGTAGCAAGAGCAACAGAAGAATACAAACAACTCACAAAAGCACTTCCAACAGTGTTTGTAGGAAGTGAAGAGAAAGTGAAGAGAATAATAAGTGTTTTATGTTCAGCAGCCAAGCAATCCCTTCAGAAGAGTGGTCTTCACATTCCACCTTGGAGAACTTCCACTTATATGCATGCCAAATGGCTTCTTCTTCACCTTGATCACTCTACTAATAATCACTCTAATTATTATATCCCTACTAATATTAATATCAATATTATGAGACATAATAATAACAACAACAGTAACAATAAATATTATTATTGGAAGCCTCCAATGGTTAATTATTAA ATGGAAAGTTTAGAAGAGGAAAAATTAGTTCAAATGGTTGATGATTTTATCGAATCAGTTGATGATCATCATCAATCACCAACTTCTTCTTCTTTTCGGCCTCTTTCATCCAATTCCAAATCCCATCATTTTTTCACATTAAAGGAGATTCTTGGGAATGGAACGAAGGAAGAAGAAGAGGTGGGTGAGAGTGTGATGAAACACTTGAGAAGATGGAAAGCATCAGATGCTTCTTCCAAAACCAATAGCCTTAGGAAATGGCTTGTGATGAAGCTCAAAATGGACGGCTATGATTCTTCTCATCTTTGTCATACCTCTTGGGTCACTTCCATGGGCTGCCCAGCAGGGGATTATGAATACATAGAGATGAGAACGAAGGATGATGAATTAGGGAGCAGAAAGAGATTGATAATAGACATAGAATTCAAAGCACAGTTTGAAGTAGCAAGAGCAACAGAAGAATACAAACAACTCACAAAAGCACTTCCAACAGTGTTTGTAGGAAGTGAAGAGAAAGTGAAGAGAATAATAAGTGTTTTATGTTCAGCAGCCAAGCAATCCCTTCAGAAGAGTGGTCTTCACATTCCACCTTGGAGAACTTCCACTTATATGCATGCCAAATGGCTTCTTCTTCACCTTGATCACTCTACTAATAATCACTCTAATTATTATATCCCTACTAATATTAATATCAATATTATGAGACATAATAATAACAACAACAGTAACAATAAATATTATTATTGGAAGCCTCCAATGGTTAATTATTAA MESLEEEKLVQMVDDFIESVDDHHQSPTSSSFRPLSSNSKSHHFFTLKEILGNGTKEEEEVGESVMKHLRRWKASDASSKTNSLRKWLVMKLKMDGYDSSHLCHTSWVTSMGCPAGDYEYIEMRTKDDELGSRKRLIIDIEFKAQFEVARATEEYKQLTKALPTVFVGSEEKVKRIISVLCSAAKQSLQKSGLHIPPWRTSTYMHAKWLLLHLDHSTNNHSNYYIPTNININIMRHNNNNNSNNKYYYWKPPMVNY*
BLAST of Csa2G302120 vs. TrEMBL
Match: A0A0A0LJS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302120 PE=4 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 9.3e-148 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1
BLAST of Csa2G302120 vs. TrEMBL
Match: A0A067ET54_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023044mg PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 3.1e-58 Identity = 127/235 (54.04%), Postives = 163/235 (69.36%), Query Frame = 1
BLAST of Csa2G302120 vs. TrEMBL
Match: V4SQ33_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026207mg PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 3.1e-58 Identity = 127/235 (54.04%), Postives = 163/235 (69.36%), Query Frame = 1
BLAST of Csa2G302120 vs. TrEMBL
Match: B9HEJ7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s03800g PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 5.8e-57 Identity = 131/254 (51.57%), Postives = 168/254 (66.14%), Query Frame = 1
BLAST of Csa2G302120 vs. TrEMBL
Match: A0A0J8CB07_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133000 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 8.3e-56 Identity = 123/265 (46.42%), Postives = 171/265 (64.53%), Query Frame = 1
BLAST of Csa2G302120 vs. TAIR10
Match: AT1G77145.1 (AT1G77145.1 Protein of unknown function (DUF506) ) HSP 1 Score: 138.7 bits (348), Expect = 5.2e-33 Identity = 85/225 (37.78%), Postives = 128/225 (56.89%), Query Frame = 1
BLAST of Csa2G302120 vs. TAIR10
Match: AT4G14620.1 (AT4G14620.1 Protein of unknown function (DUF506) ) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30 Identity = 75/213 (35.21%), Postives = 121/213 (56.81%), Query Frame = 1
BLAST of Csa2G302120 vs. TAIR10
Match: AT2G38820.2 (AT2G38820.2 Protein of unknown function (DUF506) ) HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30 Identity = 62/141 (43.97%), Postives = 93/141 (65.96%), Query Frame = 1
BLAST of Csa2G302120 vs. TAIR10
Match: AT1G77160.1 (AT1G77160.1 Protein of unknown function (DUF506) ) HSP 1 Score: 130.2 bits (326), Expect = 1.8e-30 Identity = 82/222 (36.94%), Postives = 124/222 (55.86%), Query Frame = 1
BLAST of Csa2G302120 vs. TAIR10
Match: AT2G39650.1 (AT2G39650.1 Protein of unknown function (DUF506) ) HSP 1 Score: 112.1 bits (279), Expect = 5.2e-25 Identity = 68/219 (31.05%), Postives = 113/219 (51.60%), Query Frame = 1
BLAST of Csa2G302120 vs. NCBI nr
Match: gi|449459234|ref|XP_004147351.1| (PREDICTED: uncharacterized protein LOC101214990 [Cucumis sativus]) HSP 1 Score: 530.8 bits (1366), Expect = 1.3e-147 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 1
BLAST of Csa2G302120 vs. NCBI nr
Match: gi|659121960|ref|XP_008460903.1| (PREDICTED: uncharacterized protein LOC103499645 [Cucumis melo]) HSP 1 Score: 416.0 bits (1068), Expect = 4.8e-113 Identity = 219/263 (83.27%), Postives = 229/263 (87.07%), Query Frame = 1
BLAST of Csa2G302120 vs. NCBI nr
Match: gi|641839424|gb|KDO58354.1| (hypothetical protein CISIN_1g023044mg [Citrus sinensis]) HSP 1 Score: 233.4 bits (594), Expect = 4.4e-58 Identity = 127/235 (54.04%), Postives = 163/235 (69.36%), Query Frame = 1
BLAST of Csa2G302120 vs. NCBI nr
Match: gi|567870357|ref|XP_006427800.1| (hypothetical protein CICLE_v10026207mg [Citrus clementina]) HSP 1 Score: 233.4 bits (594), Expect = 4.4e-58 Identity = 127/235 (54.04%), Postives = 163/235 (69.36%), Query Frame = 1
BLAST of Csa2G302120 vs. NCBI nr
Match: gi|224093360|ref|XP_002309896.1| (hypothetical protein POPTR_0007s03800g [Populus trichocarpa]) HSP 1 Score: 229.2 bits (583), Expect = 8.3e-57 Identity = 131/254 (51.57%), Postives = 168/254 (66.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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