Cla007348 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007348
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Histone deacetylase 15-like protein (Fragment) (AHRD V1 -- B2ZNM2_9ASTR); contains Interpro domain(s) IPR000286 Histone deacetylase superfamily
Location	Chr3 : 19758879 .. 19768155 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCAGAAGCTCTTCAAAAGAGGGTGGATGGAGAGGTTGAAGTAAATCTTCAGAAGCAAGGTGACCAACACCCATGTCAAAGTTTGAATGGAAGATGTGGAAAACCAGGCTCTGATAGGAATGGTGTTAGATCTTGTCCAGGTGATAATTGTCGAGAAGATAATACAGGTGTAGCTTCATATAGAGATGTACCAAATATAGATATGCAACCTGATACTTTACGTGTAAGTAAAAACATTGTTTAGTTAAGTAAGTGCATATTACAGTTGTCATGCAATGTTATTGTGTCCTTTGACTGCACTATGAGTAAATACAATACGGTTTTACTTCAGAAGAAGGCAAGGCAGCAGAGAGAAATAACCTTCCAAGATATGTGTAACAACTGGGACATATTTGAGGATGGTGACGAGGATGATGACGACGACAGTGACTGGGAACCGTTGCAGAAACTCAGGGAAATAGTGAAGTGGTTCTGTACCAACTGTACCATGGCCAACCTTGATGTTGCAGTACACTGTGACGTCTGTTTGTGCTCCTTTTCATCATAGTTTCCCTTTCTCTTTTGTTATGTTTTGCGTGTTTTTTAACTTGTGGTTTCAGGATGTGGTTCTGCATTTTTGAATGTATATTTTCCCTTGCAGTCATGTGGAGAACATAAAGAATCTGCAATACTCAAGCATGGGTTTTTTGCTCCTTCATTTGTACAAGATTCAAATTTATTAGAGACTGAGCTTGAAATGAAAAGAACGGATAAAGGTGAGTCATTTGTTGTTGTGAATAGACATGTTTTGTTATTTTAATTTTAATTCATTAATCTTCTTCTTGTATTTTCAATCTTATTCGTTTGGTGAATGGGTGCTCATAGTTCATGTCATATTGTATTATTATTTATTTTATTTATGAGACAACTGACCATTGGTTTCCTTGAAATATTCCTAGATACAATGTATGTATGGATGTATAGTGACGTTATAATATTCTGAATCTAATTGGATGCACTATATTTGGCCATGCATGCTGTTTCTTTCTTCTCTCCTTGTTGTTTGATACATGACTGTTTTTTTAAATTAACTTTTCTATAAGTTCTTGTATATAGATATCATAAGTTCTCTCTCCTCTTGCTAAATGCTAACCCCAACTCTAACCCTAACCTCCAGCCTCTGATGCAGTAGTCACCATTTGTCGTCACAGTCTTCGTTGTCAACAGCCATTACCATCACTGTCAGCCATTTTTGTGGGTTCTTCGTTCCGTTTTTTGTTTCTCTAGCATAAGCTTTTCGATGTCTTTGAGTTTTACTTTCTCCTCTGCCTTTTCATTGCCATCAGCCATTGTTTTTGTCATCATATTTGCTGTCACCATTGCCGTTGTCATCTTCCTTGTTGTGTGCACCGTCGTTGTGGGTTTTCAACGTTTCTTGGGTTTTCTTTTCTACTCTTGTTGTTGCTAGCCGTTCTCCTTTGCTGTCCTCCATCGTTGCCAGATTCTTTTCTTTTTTTAGTTTAGCTCGTTGGTTGAGAAGGGAAACAATTTCATTGATAAATGAAATAGAGGAGTAAAAACTCCAAATCACCCAAAGGTGATATTACATAAGATTTTGCCAATGGGAAAATAAATAAGAAAGACAATAATCAGAAAAAGGCCTATAACTTGGAAGAGGAACAATCAGGAGTTTGCTAGCCTTCAAGACTGTTTTCCATTAATTCTTCCTTCAAGATTTTGGTTGCATCTTATCCAAAGGATATACTTCTCTATTAAGGCATGTAGGCGCATTGTTCTATTTGATTGGCTGTTATTGGAGGGATTTACTATCATTTCTTTGGGTGTTGCTTCTCCAAGGTTCCAATAGTTTTTTCAAGTCAAGCATCGGCCTTAGCTTGATTGTTTCAAAGTTGCCAGAGTTAAAGATCATTCTTCTTGGTGTTCTCTATCCAATCTATTTGCGAAGTTTCTGTCTTATGCTTATCTGGGATTGTATTTATTTTTTAATTAATTTTTGTTTCATGTGATATTGTAAATTGAGCTTTTGCTCTTTTCATTATATCAATGAAAAATATTGTTTCCTTTCGAAAAAGAGAAAGAAAAAGGCCTACAACGTTTACACCAATACAAAATATAAGACATCTTAAATCACCTATTGATCTAAAAGCTTAAGCTTCTGGATGAAGGTAAATTTAATATTATACCATCTAACACTTTCCCTCACTTGTGGGCTTGAAATTTAATATTAATTGGGGAGGAAATAACATTATAGGGATTTGAACATAGGACATCTTGCACCACCTACTCTAATGCCATCTTAAATCACCAATTGACTCAAAAGTTTTGAACTTATGGGTGAAGGTAAATTTAATATTATGTCATCTAACAAGACAAAAGCAAATCCACACAACTATCAACGGAGGAAAATGAATCTCAAAAGTGTTGCCCTTTAGTTCAGCTCATCGGTTTGCTGGTTTGGTTGGGTGCTCCTTACATTTAAGTCAATGTGGTGTGGTTTGTTTTTCCGCTTTGGTTGGGCTTTGTTAGGTTCATTTATTTTCTTAGTCGTGTGTGGTTTATCAAATTTACTTTGTCATGGAGTGTAGTAGTAGTTGTATTGACAACAAGTACTTCTGTTTTTGGTTCAAAGATGAGTATTTATTCGTTGAAGATTTGGATTTTAAGTTAGTAATTATTTGACCTGTTTGGTTTGAACATTCTCTGGTCGAGTTAATGAAGGATACTGTTTTTTCAGAGTTCTTTAAGCAAGAGAGGAATGGATTTGGTATGAGTAGAATACAAAAGTGATGCTCTTTTTCTGAATGGTTAATTGAGTGTATAGGATGGCCAATGACAGGTTTAAGGAAGGTCATTTGTGTGCTTGTTGGTCGTTTTAAGAGGGGTGGTCTCACTTTTTAGGAAATGTTGAAAGTTCTTATCTCAAGTTTTTTTCATTAATATATGTGTGTGTATTGAGTACAACATCATGTGGGAGTGGGAGTGGGAGTGGGAGTGGGGGGATTCAGATCTTTGAGACTTTGACCTCTTAGTCATTGGTATGTGCCTTAACTAGGTGATCAACTTTGAGATAAATATTCTTCTTCATAATTCAACCAATGGTTCCATAATAACCAAACAACTGGAAGTGAATAGTTACAACTTACACCAATAGTTATTTTTAATGCTTTGTATTGGTGTAAATATTTGCACTCTTTTAAAGATTGTCTTTTCTCTTTAATTTCTAATTGGCGTTCCTTTTTGTAATCCACCTTTGGTGGTCATTTCATTTATCAATAAAATTTTCAGTTTCTTTCCCAAAAAAATGAAGAAAAAGAAGAAAAAGAAAAAAGAAGAAAAAAAAAAGAAAAAAAGAAAAAAAGAAAAGAAAAGAAAACCCAATGGTTCCGTAGTAGCCAGTATTAATTAGGAAATAATCTTCACTTGGCTTTCAAGTATTAGTTGATGCTTCAAATAATCAACCGGTGCATTTGAAGTTCTAAGCCATTTGTTATGGCTTATGGTTTTGACCCTTTTCTTTGCTGGTGTTGTGTTGGTTTCTAGACATTTGGTATTGTTGGTTCCACCCAGCCGCAACCAAGTTAAAAAAAATTAAGAATACAAGAGGACCAACATTGGCAGAAAACAAAAATCAGGCCTACAAAAACGATTGTGCTAAAGGAAAAGGGGTCCTCTTTAGTATCTGTAAAATGAGGGAGGAACTTATCTTGGACCTTCTGTTTTAGGTTTGTTCTCTACTTGAATTAGAGAGCTGTCTTGGGTATAACAGGTCTTGGAAGGATTTGGAATTTTACTCATTTTAGCATCTCTCTTTAGTTGATACTTTTAGCTATTTTGTAGTTATCCTCTTTTTCTGGACTCCAATGGTTGAATCTGCTGCGTACATATATATATGTATGTTTTGATATTGATTCAGTGTGATTCTTGTTCTTATGTCTTCTTTATAATTTCATTGGTCATTATTTATTGCTTTTAGAGTCTAACTACAGTCAATTCTTACATTGTATTTGTAGCCATGGTTTCGCAAGTATCAACATCTAATAGTTCCACGGCAATAGGCTTTGATGAGAGAATGTTGCTGCATTCAGAAGTATGGGACTTTGTTCAAAACTTTTTATCTTTTAGATCTCAAGCATTCAACTTTTTTGTCGTTTCTTTTGTGTCCGAGTGTTGGATGTAAATGCATGTGTTCTCCTGTGGAGATCTCCATGCTTTCTCTTTCAATGTTAGCTATTCTACTCTTTTGTCTATGTTATAGATCCATATCTCAATTAAATTGTTCCATAATTTCTTTTTGTGACGTATAGTTTAATTTGCATGTTTTTATTGTGTTTACGTCACATTATATACTATAATACTGTTGTTTGTGCCAGATTCTGAAAGATTGAACTTGGAATGTGGTGGAAAATTTTCAGATGCAAGTCTCTTTTCAGTTATTTATTTTATTGATTTAAATTTAATTTAAAGATTTGATCGTATAGTTCAAATATGTGATTCATCTGAAATAAGGAGACTGTCTTGTAAGCAGAAGCTCCAATATCAGGAGAGTCTCAAATTGCAAAATATGTTTTCCTCCCTCAGTGTTGCCCTATCTGGTGTTTCCTTAACAATAAAGTTACAGAGGACCAAAACGCTCCTCTCCTTTGTGACTATGCAACTAAATGCTGAAGCTTCCTATCCAACTCTTTGGCTTATCCTCCTTCCTATCGTACAAGATGGCTCTGATTCAGCTGCTATGTGCTAATTTTTTCTAGTAAAGCTCAAGTTCTTTGGACAAATGTGGACATGGACCACTCTTTTGGAGGCTTTAGTTTGAAATAAACCAGAGAAGTTTTAAAGTTTTTAACTCTATTTTGGACAAGTTTGGGGAATTAGTTAGATGTTTTGCTTCCTCCTGCCTAAGATTTTTGTTTTTATGACAAGGTTTATGCCAGGGCTGGTTCTAAATATTGTTGGCCCTGTGGGCGATTCCTTGGTTATGTATTTAACAACATTTCCTGCAAATAACACAAAAATTCACACATGCAACATAGATAGAATATCAACCGAAACAAGAGAAAGGAAAAAAGAAAATGATATTCCAGCTATTTGGAGAGTTGGTTCTGTCCAGAGGCCAAACAACCAAAATTCACACCCTCCTCCCCTGCATACGAAAAACCTACATAAACCTTCAGTCATCAATTTTTGTATTGGCCCTCCTCCCTTGCGTAGTGGCACAACACAAGGATTGCGTTGCAGCGCCTGATCTCCCTCGCACACGCATAAGTGGCGCTGCAACGATGCCACAGGGCAACACCGACCCAAATGTGGGGCTTCTAGAACAAGTGCTGCACACGACGCATGGTAGCGCAACTGCGTCGTGTGCTTCTTAGCCCAAACTTGGCTTTTGCCTCTCGAATGTTGTTGAATGCCTTGTTTCAACCCTAAATGTACTCCGAGCATCCTGACGGCTTCCTTTGCTTGAATTTTGTCTTAGAACTCAATAAAATGTTAAATTCATGAGAACTAACAAGATTTAGGTCGAGAAAAATAGCTCTTTTAGGGAGCTATCAAACACCCCCAACCTAAACCTTGCTAGTACTCGAGCGAGAGAAAACACAAGCACTCAAGCAAACAACATAAATAGTTGCACTTGACTCAAATACTAGTCATGCAACAAGCTTAAAATTGAGAAACTAATGGATTGATAAGCTTAACACTTTTTCTATTCTTCCTTACGTGTGTGTGTGATAAAGCCAACTTAGGTGAACTCTATAGAATCGGGACGACCTTATGGCGTCCTCTGTCCGTCTTCCCTCTACTTTTGGCTTGAGCACTGATTTTCAAGCTACCTAAACTAATCAAGAAAGTAATGCTTCAACTAAGGTTCCTGGAACTCACACGACATTAAAAAGAAAAATAAAATAAAGGGCATTTCGTTTTTCTAGGGGCACTAGCTTTCACACTCCAACCATAGGGACTTGTACCAACTTTTTTCTTGCGGGCGTCCTAACTGATCATGATGAAGGTAGCTCTTTTTACCCTTATCTATGCGCTCACACTTGCTTTTTTTTTTCTTTTATTCTTGTTTTAACCTTTCTCTTTTTTTTTTAAGATTTTATTTCACCATTTTTCTTTACACTCTTTTTGGACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCACCCCAATGCGTGCAAAGACAAGTAAAGAAAGAATTTCTTTGCTTGTCTTTGGATGTGTTAGGGACAATGAATCGTTTTAGGTTGGGGGTGGGTGTGTCGCATGTTGCTTGTGCTTGTTTGACTCTCTTGCATCTTGTTTGTCTCATTTTTGTGCACTCAAGTTTTTATAGAATTTGTTGCATTTTTGTATGATTAGGACGATCTAGGATATGCTTTTAATGCTTCCTTGCTTGTTTTTGTTGAATTGAGCATTTGATGAGCCTATTAAAATTTTTTTTCTTGCATTCTTTGCCTTCTTTATGCACAAGCCACCTTAGGTTTTTTTCTGTTAGGGCTTAGGATGGGTTTATGGTGTCCATAAGTCCGTTGTCACCCCGAAAGGCCCCATTGGTTAGAGAGTCACCTTGCTAGATTGGATGTAATGTGAGACTAGGGAGAATAAAAGAGTTAAGCTTGTGTAATGTAAAAAAAAAAGGAAGAGAAGAAAAAGTCCAAAAAGAATGTAAAGAAAAAGGGTGAAATAAAAAAGGAGAAAGAGAAAAACAAGAATAATAAGGAAAAAGAATAAGCGAGTGAGTGCATGGATAGGGGTGGAAAGAGCTACATTTGTCGTGATCAGTTAGGACACTTGCATGAAAAAAGTGGGTAAGAGTCCTTATGGTTGGAATGTGAAAGCTAGTGCCCCTAAGTAAAAAAAATGCCTTTATTCTTGCTCAATTACATTCTTACCCCCTTGCGGAGTATGTATTCACAAGGGAAATTTGTACGGATGACCCAAAATTTGGGTTCAAAATGGCAAATGACCCGTTTTTTGAAAAAATGTCAAATGACCTGTTGATGTCATGTTCGGGCAAAATTACTAAATTAAACTTGCGCATGCAGAAAAGCCATCTCGGTCTTGGTCTTGATCTCGCTTCCTTTCCTCACTCACAAATCACCATCCTCTCGTTTTCTCGCTCTTGGTCTCAGTCTCGATCTCGCTCTCTCGCTCTTGCTCTTCTTTTCCTCACTCACAGATCACTCTGCTTTCTTACAGCTGGAGGTTGTGTGTGGGTTTTTGCTGAAGTTGGTTGTGTTGGAGGAGGAAAGAGAGAAAAAAAGAGAAAAGAACAGTTCCCCCAAAGTTGGTCATGCCAGTGAAGAAGAAGGGCAGAGGGAAAGAAAGAAAGAGTTTTTCCAAAGTTGGTTCGCCGAAAAAGAAGTAGAAGGGGGAAAAAGGAATTTCGCTGGAGAAGTTGTGATCGCATTGGAGAAGAAGAAGGAAAGAGGAAGAAAGAAATCAGGGAAAATTCGTAACTTTACTTTATGACATCAACAGAAGGTCATTTGACATTTTTTTTTTCAAAAAAACAGGTCACTTTACAGTTTGGGTCTCTAAAACAAGTCACCTGTACAATTATTCCCATTCACAATTGGAGGCCTCACATCCTTATCTGCCTTTTTGTAATCTGCTCTTCTTCAATGAAAATATTGTTTCTTACAAAAAGAAAAGAAAAAGGAAAGGAAGAACCAAAAAGAAAAAGAAAAGGGAAAAGGTAACCATTCGTCAAGCCTACATTAACATGTTTTTCTTTTTCTTTTTTAAATCTAAATTTAATTAATTTAATTATTTATTTTTTATTTTTATGAAAATGGCATGACACTGTTCTTATTTTGTAATATTCTTGTCATATGTGTAGGTCTGTGGTTTAGATCCAAAAGGACTTTTGCTTTTGTTTTAAACTCTTTAATCACTGGTTTTCTAGTGCTTTACTTCCTGTCTTTTGGTATTCTTGCTAGAGAAGGTTGAAATGAAGTCACACCCACACCCAGAAAGACCGGATCGTCTGAGAGCTATTGCTGCTAGCTTGGCTACAGCTGGTAATCTTTACTTCATATTTTCTTTTGTTTTTAGGGTAGGAAATAGCTGGGCTGATGTTTACAATTTAATATGTTGTAATGTAGTTTATTCCTTTCAACTTTTTATCACTGGACTGTAAGCAATGGAAAAAATTTACTGCTGTAGGAATTTTTCCTGGAAGATGTTATCCAATTCCAGCTAGAGAAATTACCAAAGAAGAACTTGAGATGGTAAGCAACTATTTATTTTCCAGGCATTCTTTTAAGAATTTGGTGCGAACAGTTTTCATTGGTGGATGAGGTATTCAATAGGAAGCTAAAGCCTCGTAAATGACATGGAGTCCTAAAAAGCTACCGTATGGGATATGAATGATGATCATAGACATAGGGTAATTGCAAAAATGACTAAAAAGTGAAATCTAAGTTTATATAGAATATGAAATGATGAGCATACTCTTAAGATTATGATAGTAATTTTCGTATATAGATATTGGCCTAATGTTGGGTGGTATAGATTTGTCAACTAATCATGACTAGTATATAATGATATGTATGGAAACTGACGATGTGGGAGTGGGTGAAGATTTTCGTAGATGTATCAATGAAATATCATGTGAAACGATGTACATTACTTATATTGAGGATATGTCCATAGATATATTGAGGATAACATTGATATATATATCCATGAACATAACATAGACGTTGCTTCAGTTATTTGATAAGAAAGACTTTGTGATTTTTTGTTTTTTTGACCATTCTGGGATAAAAGGTTCATTCCCTGGAGAACATTCAAGCTGTTGAGGTTACAAGCAATGTTATTTCTTGGTATGCCATATTCTCTTTCTATCATTTCCCATGTAGAATGATAGAATGCATTTGCTTTTATGGAACTAGAATATATTTGACATTGTTTATGGATGATGAAGTAATCTTTTTGCAACTCATGGTGACTAAATGGAAAGAACTACCCCCCTCTTAAAAGGCCACTTTTGATTAAATGAAAAAAAAACATAAGAGACATAAAAGAGAAAAGCCCCACAGGAGAGGAGCCAACCTAAACCAAAAAGGGCCTTCGACTCCATCCTACGAAATGGGACTGATGCAAGTCAGAGGTGATCAATTCCTTGACCCTATTGGGGAGGATGATTTCCTTAAGATGTGGTCCAAGATGTTAACTCTATCACAGAGTATCTTCACACGAAAGTTTGACCTTCTTGAGAACTTTAACCTTCCAAAGCAAGGTGAAAATTGGCATTGA

mRNA sequence

ATGGTTTCAGAAGCTCTTCAAAAGAGGGTGGATGGAGAGGTTGAAGTAAATCTTCAGAAGCAAGGTGACCAACACCCATGTCAAAGTTTGAATGGAAGATGTGGAAAACCAGGCTCTGATAGGAATGGTGTTAGATCTTGTCCAGGTGATAATTGTCGAGAAGATAATACAGGTGTAGCTTCATATAGAGATGTACCAAATATAGATATGCAACCTGATACTTTACGTAAGAAGGCAAGGCAGCAGAGAGAAATAACCTTCCAAGATATGTGTAACAACTGGGACATATTTGAGGATGGTGACGAGGATGATGACGACGACAGTGACTGGGAACCGTTGCAGAAACTCAGGGAAATAGTGAAGTGGTTCTGTACCAACTGTACCATGGCCAACCTTGATGTTGCAGTACACTGTGACGTCTGTGAGAAGGTTGAAATGAAGTCACACCCACACCCAGAAAGACCGGATCGTCTGAGAGCTATTGCTGCTAGCTTGGCTACAGCTGGAATTTTTCCTGGAAGATGTTATCCAATTCCAGCTAGAGAAATTACCAAAGAAGAACTTGAGATGGTTCATTCCCTGGAGAACATTCAAGCTGTTGAGGTTACAAGCAATGTTATTTCTTGGAGAGGAGCCAACCTAAACCAAAAAGGGCCTTCGACTCCATCCTACGAAATGGGACTGATGCAAGTCAGAGGTGATCAATTCCTTGACCCTATTGGGGAGGATGATTTCCTTAAGATGTGGTCCAAGATGTTAACTCTATCACAGAGTATCTTCACACGAAAGTTTGACCTTCTTGAGAACTTTAACCTTCCAAAGCAAGGTGAAAATTGGCATTGA

Coding sequence (CDS)

ATGGTTTCAGAAGCTCTTCAAAAGAGGGTGGATGGAGAGGTTGAAGTAAATCTTCAGAAGCAAGGTGACCAACACCCATGTCAAAGTTTGAATGGAAGATGTGGAAAACCAGGCTCTGATAGGAATGGTGTTAGATCTTGTCCAGGTGATAATTGTCGAGAAGATAATACAGGTGTAGCTTCATATAGAGATGTACCAAATATAGATATGCAACCTGATACTTTACGTAAGAAGGCAAGGCAGCAGAGAGAAATAACCTTCCAAGATATGTGTAACAACTGGGACATATTTGAGGATGGTGACGAGGATGATGACGACGACAGTGACTGGGAACCGTTGCAGAAACTCAGGGAAATAGTGAAGTGGTTCTGTACCAACTGTACCATGGCCAACCTTGATGTTGCAGTACACTGTGACGTCTGTGAGAAGGTTGAAATGAAGTCACACCCACACCCAGAAAGACCGGATCGTCTGAGAGCTATTGCTGCTAGCTTGGCTACAGCTGGAATTTTTCCTGGAAGATGTTATCCAATTCCAGCTAGAGAAATTACCAAAGAAGAACTTGAGATGGTTCATTCCCTGGAGAACATTCAAGCTGTTGAGGTTACAAGCAATGTTATTTCTTGGAGAGGAGCCAACCTAAACCAAAAAGGGCCTTCGACTCCATCCTACGAAATGGGACTGATGCAAGTCAGAGGTGATCAATTCCTTGACCCTATTGGGGAGGATGATTTCCTTAAGATGTGGTCCAAGATGTTAACTCTATCACAGAGTATCTTCACACGAAAGTTTGACCTTCTTGAGAACTTTAACCTTCCAAAGCAAGGTGAAAATTGGCATTGA

Protein sequence

MVSEALQKRVDGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTGVASYRDVPNIDMQPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQKLREIVKWFCTNCTMANLDVAVHCDVCEKVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEVTSNVISWRGANLNQKGPSTPSYEMGLMQVRGDQFLDPIGEDDFLKMWSKMLTLSQSIFTRKFDLLENFNLPKQGENWH

Homology

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BLAST of Cla007348 vs. Swiss-Prot
Match: HDA15_ARATH (Histone deacetylase 15 OS=Arabidopsis thaliana GN=HDA15 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 6.8e-20
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 1


Query: 145 EMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEVTS 204
           E+K+ PHPERPDRLRAIAASLATAG+FPGRC PI AREITK+EL+MVH+ E++ AV+ TS
Sbjct: 165 EVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHTSEHVDAVDTTS 224

Query: 205 NVI 208
            ++
Sbjct: 225 QLL 227

HSP 2 Score: 80.5 bits (197), Expect = 3.2e-14
Identity = 44/103 (42.72%), Postives = 55/103 (53.40%), Query Frame = 1


Query: 45  RSCPGDNCREDNTG----VASYRDVPN--IDMQPDTLRKKARQQREITFQDMCNNWDIFE 104
           RSC G   R  N G      S  +  N  I++ P    K+AR  RE+TF+D+     +  
Sbjct: 8   RSCEGSKRRHVNGGDIAVPCSGEECSNGDINVAPGVSAKRARVSREMTFEDIYGADALLN 67

Query: 105 DGDEDDDDDSDWEPLQKLREIVKWFCTNCTMANLDVAVHCDVC 142
           D D+D+DDD DWEP+Q   E VKW C NCTM+N    VHC +C
Sbjct: 68  D-DDDEDDDCDWEPVQAPMEFVKWCCVNCTMSNPGDMVHCCIC 109

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BLAST of Cla007348 vs. TrEMBL
Match: A0A0A0LZW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629160 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.1e-64
Identity = 119/144 (82.64%), Postives = 130/144 (90.28%), Query Frame = 1


Query: 1   MVSEALQKRVDGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTGVA 60
           MVSEALQKRV+GE EVNLQKQG+QHP  SLNGRCGK GS+R  VRSCP D+CREDNTGVA
Sbjct: 1   MVSEALQKRVNGEAEVNLQKQGEQHPRHSLNGRCGKSGSERKSVRSCPDDSCREDNTGVA 60

Query: 61  SYRDVP---NIDMQPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQKLR 120
           SY+DVP   +IDMQPD+LRKK R+QREI+FQDM NN DIF+DGD+DDDDDSDWEPLQKLR
Sbjct: 61  SYKDVPSSVDIDMQPDSLRKKTRKQREISFQDMGNNVDIFDDGDDDDDDDSDWEPLQKLR 120

Query: 121 EIVKWFCTNCTMANLDVAVHCDVC 142
           EIVKWFCTNCTMANLDVAVHCD C
Sbjct: 121 EIVKWFCTNCTMANLDVAVHCDSC 144

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BLAST of Cla007348 vs. TrEMBL
Match: A0A0A0LZW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629160 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.5e-29
Identity = 65/67 (97.01%), Postives = 67/67 (100.00%), Query Frame = 1


Query: 143 KVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEV 202
           +VEMKSHPHPERPDRLRAIAASLATAGIFPG+CYPIPAREITKEELEMVHSLENIQAVEV
Sbjct: 206 EVEMKSHPHPERPDRLRAIAASLATAGIFPGKCYPIPAREITKEELEMVHSLENIQAVEV 265

Query: 203 TSNVISW 210
           TSNVISW
Sbjct: 266 TSNVISW 272

HSP 2 Score: 130.6 bits (327), Expect = 3.0e-27
Identity = 68/146 (46.58%), Postives = 86/146 (58.90%), Query Frame = 1


Query: 1   MVSEALQ--KRVDGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTG 60
           MVSE LQ  + +DG+ E NL  Q DQ   +  NG+    G D      C  +NCRE+NT 
Sbjct: 104 MVSETLQNTRLMDGKAENNLHDQNDQILLEGFNGQHENVGLDGINATPCSDENCREENTS 163

Query: 61  VASYRDVP---NIDMQPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQK 120
             S RD+    N  M PD + K+ RQQ+E+T +DM N     +  D DDDDDSDWEPL  
Sbjct: 164 GTSSRDMADNLNGSMLPDIISKRVRQQKEMTLEDMYN-----DQYDYDDDDDSDWEPLPG 223

Query: 121 LREIVKWFCTNCTMANLDVAVHCDVC 142
              +++WFC NCTMAN D  VHCD+C
Sbjct: 224 PTAVIRWFCVNCTMANQDDVVHCDIC 244

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BLAST of Cla007348 vs. TrEMBL
Match: D7SIV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g04120 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.0e-22
Identity = 53/66 (80.30%), Postives = 63/66 (95.45%), Query Frame = 1


Query: 143 KVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEV 202
           +VEMKSHPHPERPDRLRAIAASLATAGIFPG+CYPI AREIT+EEL+MVHSLE+++ VE+
Sbjct: 306 EVEMKSHPHPERPDRLRAIAASLATAGIFPGKCYPILAREITREELQMVHSLEHVETVEL 365

Query: 203 TSNVIS 209
           TS ++S
Sbjct: 366 TSRILS 371

HSP 2 Score: 129.8 bits (325), Expect = 5.2e-27
Identity = 69/143 (48.25%), Postives = 86/143 (60.14%), Query Frame = 1


Query: 1   MVSEALQ--KRVDGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTG 60
           + SE LQ  +  +GE E++L K  +Q  CQ  NGR G  G D    R C  +NC +++ G
Sbjct: 15  LASETLQMSRLTNGEAEISLHKPNNQVQCQGSNGRYGNLGFDGTNGRPCRDENCGKEDIG 74

Query: 61  VASYRDVPNIDMQPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQKLRE 120
           V+S       D   D L KKA QQ+E+T +DM N  D+      DDDDDSDWEP  +  E
Sbjct: 75  VSSG------DASTDVLSKKATQQKEMTLEDMYNQ-DL-----NDDDDDSDWEPFPQHVE 134

Query: 121 IVKWFCTNCTMANLDVAVHCDVC 142
           IVKWFCTNCTM NLD  VHCD+C
Sbjct: 135 IVKWFCTNCTMVNLDDVVHCDIC 145

[Close]

BLAST of Cla007348 vs. TrEMBL
Match: M5WXC6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003397mg PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.6e-22
Identity = 52/66 (78.79%), Postives = 63/66 (95.45%), Query Frame = 1


Query: 143 KVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEV 202
           +V+MKSHPHPERPDR+RAIAASLATAGIFPGRCYPI AREIT+EEL+MVHSL++I+AV+ 
Sbjct: 205 EVQMKSHPHPERPDRIRAIAASLATAGIFPGRCYPISAREITREELQMVHSLDHIEAVDH 264

Query: 203 TSNVIS 209
           TS++ S
Sbjct: 265 TSHMFS 270

HSP 2 Score: 122.5 bits (306), Expect = 8.3e-25
Identity = 65/131 (49.62%), Postives = 82/131 (62.60%), Query Frame = 1


Query: 11  DGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTGVASYRDVPNIDM 70
           +GE  ++L KQ ++ P +  NGR G    D N  RSC  +NC E +   +S         
Sbjct: 7   NGEAGMSLHKQKEKLPLEGFNGRGGNSVLDGNNGRSCY-ENCGEKDIAGSS-------SS 66

Query: 71  QPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQKLREIVKWFCTNCTMA 130
           QPD + KKA Q +E+TFQDM  N ++ +  D+DDDDDSDWEPLQK   +VKWFCTNCTM 
Sbjct: 67  QPDVVCKKAWQHKEMTFQDMYENQNLID--DDDDDDDSDWEPLQK---VVKWFCTNCTMV 124

Query: 131 NLDVAVHCDVC 142
           N D  VHCDVC
Sbjct: 127 NFDDIVHCDVC 124

[Close]

BLAST of Cla007348 vs. TrEMBL
Match: W9RRC9_9ROSA (Histone deacetylase 15 OS=Morus notabilis GN=L484_019059 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-22
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 1


Query: 143 KVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEV 202
           +VEMKSHPHPERPDRLRAIAASLA AGI+PGRCYPI AREITKEEL MVHSLE+I+AVE+
Sbjct: 222 EVEMKSHPHPERPDRLRAIAASLARAGIYPGRCYPITAREITKEELLMVHSLEHIEAVEL 281

Query: 203 TSNVIS 209
           TS + +
Sbjct: 282 TSKIFA 287

HSP 2 Score: 117.9 bits (294), Expect = 2.0e-23
Identity = 56/66 (84.85%), Postives = 63/66 (95.45%), Query Frame = 1


Query: 143 KVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEV 202
           +VEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPI AREIT++EL+MVHSLE+IQAVE 
Sbjct: 214 EVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPISAREITQQELQMVHSLEHIQAVEF 273

Query: 203 TSNVIS 209
           TS++ S
Sbjct: 274 TSHIFS 279

[Close]

BLAST of Cla007348 vs. NCBI nr
Match: gi|659098869|ref|XP_008450330.1| (PREDICTED: histone deacetylase 15 isoform X4 [Cucumis melo])

HSP 1 Score: 259.2 bits (661), Expect = 8.1e-66
Identity = 119/144 (82.64%), Postives = 132/144 (91.67%), Query Frame = 1


Query: 1   MVSEALQKRVDGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTGVA 60
           MVSEALQKRV+GE EVNLQKQG+QHPC SLNGRCGK GS+R  VRSCP D+CR+DNTGVA
Sbjct: 1   MVSEALQKRVNGEAEVNLQKQGEQHPCHSLNGRCGKSGSERKSVRSCPDDSCRKDNTGVA 60

Query: 61  SYRDVPN---IDMQPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQKLR 120
           SY+DVP+   ID+QPD+LRKK R+QREI+FQDMCNN DIF+DGDEDD+DDSDWEPLQKLR
Sbjct: 61  SYKDVPSSVDIDVQPDSLRKKTRKQREISFQDMCNNVDIFDDGDEDDEDDSDWEPLQKLR 120

Query: 121 EIVKWFCTNCTMANLDVAVHCDVC 142
           EIVKWFCTNCTMANLDVAVHCD C
Sbjct: 121 EIVKWFCTNCTMANLDVAVHCDSC 144

[Close]

BLAST of Cla007348 vs. NCBI nr
Match: gi|659098869|ref|XP_008450330.1| (PREDICTED: histone deacetylase 15 isoform X4 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 7.5e-27
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 1


Query: 143 KVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEV 202
           +VEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHS ENIQAVEV
Sbjct: 206 EVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSPENIQAVEV 265

Query: 203 TSNVIS 209
           TSNVIS
Sbjct: 266 TSNVIS 271

HSP 2 Score: 259.2 bits (661), Expect = 8.1e-66
Identity = 119/144 (82.64%), Postives = 132/144 (91.67%), Query Frame = 1


Query: 1   MVSEALQKRVDGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTGVA 60
           MVSEALQKRV+GE EVNLQKQG+QHPC SLNGRCGK GS+R  VRSCP D+CR+DNTGVA
Sbjct: 1   MVSEALQKRVNGEAEVNLQKQGEQHPCHSLNGRCGKSGSERKSVRSCPDDSCRKDNTGVA 60

Query: 61  SYRDVPN---IDMQPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQKLR 120
           SY+DVP+   ID+QPD+LRKK R+QREI+FQDMCNN DIF+DGDEDD+DDSDWEPLQKLR
Sbjct: 61  SYKDVPSSVDIDVQPDSLRKKTRKQREISFQDMCNNVDIFDDGDEDDEDDSDWEPLQKLR 120

Query: 121 EIVKWFCTNCTMANLDVAVHCDVC 142
           EIVKWFCTNCTMANLDVAVHCD C
Sbjct: 121 EIVKWFCTNCTMANLDVAVHCDSC 144

[Close]

BLAST of Cla007348 vs. NCBI nr
Match: gi|659098863|ref|XP_008450327.1| (PREDICTED: histone deacetylase 15 isoform X1 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 7.5e-27
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 1


Query: 143 KVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEV 202
           +VEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHS ENIQAVEV
Sbjct: 206 EVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSPENIQAVEV 265

Query: 203 TSNVIS 209
           TSNVIS
Sbjct: 266 TSNVIS 271

HSP 2 Score: 259.2 bits (661), Expect = 8.1e-66
Identity = 119/144 (82.64%), Postives = 132/144 (91.67%), Query Frame = 1


Query: 1   MVSEALQKRVDGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTGVA 60
           MVSEALQKRV+GE EVNLQKQG+QHPC SLNGRCGK GS+R  VRSCP D+CR+DNTGVA
Sbjct: 1   MVSEALQKRVNGEAEVNLQKQGEQHPCHSLNGRCGKSGSERKSVRSCPDDSCRKDNTGVA 60

Query: 61  SYRDVPN---IDMQPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQKLR 120
           SY+DVP+   ID+QPD+LRKK R+QREI+FQDMCNN DIF+DGDEDD+DDSDWEPLQKLR
Sbjct: 61  SYKDVPSSVDIDVQPDSLRKKTRKQREISFQDMCNNVDIFDDGDEDDEDDSDWEPLQKLR 120

Query: 121 EIVKWFCTNCTMANLDVAVHCDVC 142
           EIVKWFCTNCTMANLDVAVHCD C
Sbjct: 121 EIVKWFCTNCTMANLDVAVHCDSC 144

[Close]

BLAST of Cla007348 vs. NCBI nr
Match: gi|659098867|ref|XP_008450329.1| (PREDICTED: histone deacetylase 15 isoform X3 [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 6.7e-28
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 1


Query: 142 EKVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVE 201
           EKVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHS ENIQAVE
Sbjct: 181 EKVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSPENIQAVE 240

Query: 202 VTSNVIS 209
           VTSNVIS
Sbjct: 241 VTSNVIS 247

HSP 2 Score: 253.4 bits (646), Expect = 4.5e-64
Identity = 119/144 (82.64%), Postives = 130/144 (90.28%), Query Frame = 1


Query: 1   MVSEALQKRVDGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTGVA 60
           MVSEALQKRV+GE EVNLQKQG+QHP  SLNGRCGK GS+R  VRSCP D+CREDNTGVA
Sbjct: 1   MVSEALQKRVNGEAEVNLQKQGEQHPRHSLNGRCGKSGSERKSVRSCPDDSCREDNTGVA 60

Query: 61  SYRDVP---NIDMQPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQKLR 120
           SY+DVP   +IDMQPD+LRKK R+QREI+FQDM NN DIF+DGD+DDDDDSDWEPLQKLR
Sbjct: 61  SYKDVPSSVDIDMQPDSLRKKTRKQREISFQDMGNNVDIFDDGDDDDDDDSDWEPLQKLR 120

Query: 121 EIVKWFCTNCTMANLDVAVHCDVC 142
           EIVKWFCTNCTMANLDVAVHCD C
Sbjct: 121 EIVKWFCTNCTMANLDVAVHCDSC 144

[Close]

BLAST of Cla007348 vs. NCBI nr
Match: gi|449442727|ref|XP_004139132.1| (PREDICTED: histone deacetylase 15 isoform X1 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 2.6e-27
Identity = 64/66 (96.97%), Postives = 66/66 (100.00%), Query Frame = 1


Query: 143 KVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSLENIQAVEV 202
           +VEMKSHPHPERPDRLRAIAASLATAGIFPG+CYPIPAREITKEELEMVHSLENIQAVEV
Sbjct: 206 EVEMKSHPHPERPDRLRAIAASLATAGIFPGKCYPIPAREITKEELEMVHSLENIQAVEV 265

Query: 203 TSNVIS 209
           TSNVIS
Sbjct: 266 TSNVIS 271

HSP 2 Score: 253.4 bits (646), Expect = 4.5e-64
Identity = 119/144 (82.64%), Postives = 130/144 (90.28%), Query Frame = 1


Query: 1   MVSEALQKRVDGEVEVNLQKQGDQHPCQSLNGRCGKPGSDRNGVRSCPGDNCREDNTGVA 60
           MVSEALQKRV+GE EVNLQKQG+QHP  SLNGRCGK GS+R  VRSCP D+CREDNTGVA
Sbjct: 1   MVSEALQKRVNGEAEVNLQKQGEQHPRHSLNGRCGKSGSERKSVRSCPDDSCREDNTGVA 60

Query: 61  SYRDVP---NIDMQPDTLRKKARQQREITFQDMCNNWDIFEDGDEDDDDDSDWEPLQKLR 120
           SY+DVP   +IDMQPD+LRKK R+QREI+FQDM NN DIF+DGD+DDDDDSDWEPLQKLR
Sbjct: 61  SYKDVPSSVDIDMQPDSLRKKTRKQREISFQDMGNNVDIFDDGDDDDDDDSDWEPLQKLR 120

Query: 121 EIVKWFCTNCTMANLDVAVHCDVC 142
           EIVKWFCTNCTMANLDVAVHCD C
Sbjct: 121 EIVKWFCTNCTMANLDVAVHCDSC 144

The following BLAST results are available for this feature:

BLAST of Cla007348 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HDA15_ARATH	6.8e-20	71.43	Histone deacetylase 15 OS=Arabidopsis thaliana GN=HDA15 PE=2 SV=2	[more]

BLAST of Cla007348 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZW7_CUCSA	3.1e-64	82.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629160 PE=4 SV=1	[more]
A0A0A0LZW7_CUCSA	9.5e-29	97.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629160 PE=4 SV=1	[more]
D7SIV6_VITVI	1.0e-22	80.30	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g04120 PE=4 SV=...	[more]
M5WXC6_PRUPE	8.6e-22	78.79	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003397mg PE=4 SV=1	[more]
W9RRC9_9ROSA	5.0e-22	81.82	Histone deacetylase 15 OS=Morus notabilis GN=L484_019059 PE=4 SV=1	[more]

BLAST of Cla007348 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098869\|ref\|XP_008450330.1\|	8.1e-66	82.64	PREDICTED: histone deacetylase 15 isoform X4 [Cucumis melo]	[more]
gi\|659098869\|ref\|XP_008450330.1\|	7.5e-27	96.97	PREDICTED: histone deacetylase 15 isoform X4 [Cucumis melo]	[more]
gi\|659098863\|ref\|XP_008450327.1\|	7.5e-27	96.97	PREDICTED: histone deacetylase 15 isoform X1 [Cucumis melo]	[more]
gi\|659098867\|ref\|XP_008450329.1\|	6.7e-28	98.51	PREDICTED: histone deacetylase 15 isoform X3 [Cucumis melo]	[more]
gi\|449442727\|ref\|XP_004139132.1\|	2.6e-27	96.97	PREDICTED: histone deacetylase 15 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000286	His_deacetylse
IPR001876	Znf_RanBP2
IPR023801	His_deacetylse_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008270	zinc ion binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU50889	watermelon EST collection version 2.0	transcribed_cluster
WMU65093	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla007348	Cla007348.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU65093	WMU65093	transcribed_cluster
WMU50889	WMU50889	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000286	Histone deacetylase superfamily	PANTHER	PTHR10625	HISTONE DEACETYLASE	coord: 1..208 score: 2.7
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 122..141 scor
IPR023801	Histone deacetylase domain	GENE3D	G3DSA:3.40.800.20		coord: 140..213 score: 5.
None	No IPR available	PANTHER	PTHR10625:SF120	HISTONE DEACETYLASE 15	coord: 1..208 score: 2.7
None	No IPR available	unknown	SSF52768	Arginase/deacetylase	coord: 148..207 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla007348	Csa1G629160	Cucumber (Chinese Long) v2	cuwmB022
Cla007348	MELO3C015104	Melon (DHL92) v3.5.1	mewmB273
Cla007348	CSPI01G31140	Wild cucumber (PI 183967)	cpiwmB024

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla007348	Wax gourd	wgowmB655
Cla007348	Cucumber (Gy14) v1	cgywmB642
Cla007348	Cucurbita maxima (Rimu)	cmawmB048
Cla007348	Cucurbita maxima (Rimu)	cmawmB100
Cla007348	Cucurbita moschata (Rifu)	cmowmB039
Cla007348	Cucurbita moschata (Rifu)	cmowmB089
Cla007348	Watermelon (Charleston Gray)	wcgwmB226
Cla007348	Cucurbita pepo (Zucchini)	cpewmB356
Cla007348	Cucurbita pepo (Zucchini)	cpewmB644
Cla007348	Bottle gourd (USVL1VR-Ls)	lsiwmB397
Cla007348	Cucumber (Gy14) v2	cgybwmB024
Cla007348	Melon (DHL92) v3.6.1	medwmB264
Cla007348	Silver-seed gourd	carwmB0892
Cla007348	Silver-seed gourd	carwmB0969
Cla007348	Cucumber (Chinese Long) v3	cucwmB027
Cla007348	Watermelon (97103) v2	wmwmbB127