Cla007329 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTGGCTTATTCCCAGTTTGCTCTTCTTCGTTCTTGTCTCTTATTCCACTGCTTATGATCGTTGCGTTCATCAATCAAAAGCTACTCACTATCATTATGACGTGCCTGCATCATGTGTGAATTTAATCCCTATTTGATTAGAGTTTCTCTTGTTTATTAGTGATAGACTCTAATCACTATCATTAGTTTTGTCATTTAAAATAATTACTCTAATTTTTTTTTAATTTTTTTTTTATGACGGTATGATTAAATACGTGGGTCGGGGAATAGTATAAGCCCTATGTTCATTTTGGCAAAAAAAAAAAAAAATTATGAAAGCTACTTCTTTTTCTTTTTCTTTTTCCTTATTTTTTTCGGCTTGCGCAATTTAACTTTATTTTTTAAGAACATTATTATTAAAAGTGGATAAGCAAACATAGAAACTTATTTGAAGAAGTAATGTTTATAAGCTTAATTTTCTAAAATTAAATCATGATAGGATGGAACTAATGTTTTGTTGTTGTAATTTAATTTTAAAATTTTGGATTATTCTATTAAAAATGGGAGATTCTTGGATTAGAAAAAAAGAGAATTTTTTATGATGTAGAAAAGGAAGTTAATATCAATTTTGTTTGATGATATAAAGATGGATCAACATGTGGATATGGAAAATTAGAGTTTGAAATTTCCAAAGGATACTTTGCAGCTGTTGTGGCTTCCCTTTATAAAAAAGGAGCTTCTTGTGGTGCTTGCTATCAAGTAATTAATTTATATATATTTTTAATTTGTTTTCTCCCATCCCTTTTAAAAGTTAATGATAAATTCATTGGTAATTATGTAGGTAAGATGTAAGAACAAGACAATATGCAATCCAATAGGGACTAAAGTAGTTGTGACAGATATACATTACAATAATGGAACTGATTTTGTTCTAAGTAGAAAAGCTTTCTCCACTATGGCTTTGAGGGGCAAGACTCAACAACTTTTGAATATTGATAGCATCCCCGTGGAATACAAGAGGTAAATCATACTTTTCCATAACTACTTAAAATCAACTTTTAACACTCTTACTCTTGTTTGGTAACAACTTCGGGTCTATTTGATAACTATTTGATTTTTGGTTTTTTAGTTTTTGAAAATTAAGCATATATGATCATGAGCCTTAAATTCCTTGCTTTGTTATCTACCTTTTACCATTGTTCTTAAAAAACTAAGCCAAATTTTGAAAACTAAAACAAATTAATTTTTTCAATAAAAATTGCTTTTGTTTTTAGAAATTGGCTAAAAATTCAACCACTGTATTTAAAAAAAGATGCAAATGATTGTAAAAAACTAAGAGAAAATAGACTTAGTTTTCAAAAAAATAAAACAAAATAGTTATCAAAGGGACTTTTATTTTTAGTTTTCTTTTTTAAAAATTTATGCTTGTTGATTATGAATTTCTTTTTTAAATTATAATTTCCCTTTTATTAAGAAAATACTTTGAATTTCTCGTTAAATTCTAGAAATACCATGTTTTTAATTTTGAAAAATATTTTCTTTTGGTTTTAAAAAAAAAAATTGGTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTAAATTTTAGTTGAGAGTGGATGATAGAATAAACACAACTTATGGATGGAACTAG ATGGCTTCTTGGCTTATTCCCAGTTTGCTCTTCTTCGTTCTTGTCTCTTATTCCACTGCTTATGATCGTTGCGTTCATCAATCAAAAGCTACTCACTATCATTATGACGTGCCTGCATCATATGGATCAACATGTGGATATGGAAAATTAGAGTTTGAAATTTCCAAAGGATACTTTGCAGCTGTTGTGGCTTCCCTTTATAAAAAAGGAGCTTCTTGTGGTGCTTGCTATCAATTGAGAGTGGATGATAGAATAAACACAACTTATGGATGGAACTAG ATGGCTTCTTGGCTTATTCCCAGTTTGCTCTTCTTCGTTCTTGTCTCTTATTCCACTGCTTATGATCGTTGCGTTCATCAATCAAAAGCTACTCACTATCATTATGACGTGCCTGCATCATATGGATCAACATGTGGATATGGAAAATTAGAGTTTGAAATTTCCAAAGGATACTTTGCAGCTGTTGTGGCTTCCCTTTATAAAAAAGGAGCTTCTTGTGGTGCTTGCTATCAATTGAGAGTGGATGATAGAATAAACACAACTTATGGATGGAACTAG MASWLIPSLLFFVLVSYSTAYDRCVHQSKATHYHYDVPASYGSTCGYGKLEFEISKGYFAAVVASLYKKGASCGACYQLRVDDRINTTYGWN
BLAST of Cla007329 vs. Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.7e-10 Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = 1
BLAST of Cla007329 vs. Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.6e-10 Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 1
BLAST of Cla007329 vs. Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.7e-08 Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 1
BLAST of Cla007329 vs. Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06 Identity = 28/64 (43.75%), Postives = 36/64 (56.25%), Query Frame = 1
BLAST of Cla007329 vs. TrEMBL
Match: A0A0A0K1G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019830 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.1e-21 Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 1
BLAST of Cla007329 vs. TrEMBL
Match: A0A0A0K2Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019840 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 4.2e-18 Identity = 47/79 (59.49%), Postives = 56/79 (70.89%), Query Frame = 1
BLAST of Cla007329 vs. TrEMBL
Match: A0A0A0K0R8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019850 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.8e-16 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1
BLAST of Cla007329 vs. TrEMBL
Match: A0A0A0K4T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019330 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.8e-16 Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 1
BLAST of Cla007329 vs. TrEMBL
Match: A0A0A0K2Q9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019890 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-15 Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 1
BLAST of Cla007329 vs. NCBI nr
Match: gi|659098745|ref|XP_008450281.1| (PREDICTED: expansin-like A1 [Cucumis melo]) HSP 1 Score: 138.7 bits (348), Expect = 5.3e-30 Identity = 64/81 (79.01%), Postives = 73/81 (90.12%), Query Frame = 1
BLAST of Cla007329 vs. NCBI nr
Match: gi|659094104|ref|XP_008447886.1| (PREDICTED: expansin-like A1 isoform X1 [Cucumis melo]) HSP 1 Score: 110.5 bits (275), Expect = 1.5e-21 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 1
BLAST of Cla007329 vs. NCBI nr
Match: gi|659094108|ref|XP_008447888.1| (PREDICTED: expansin-like A3 isoform X3 [Cucumis melo]) HSP 1 Score: 109.4 bits (272), Expect = 3.4e-21 Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 1
BLAST of Cla007329 vs. NCBI nr
Match: gi|449454267|ref|XP_004144877.1| (PREDICTED: expansin-like A3 [Cucumis sativus]) HSP 1 Score: 109.0 bits (271), Expect = 4.5e-21 Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 1
BLAST of Cla007329 vs. NCBI nr
Match: gi|700188070|gb|KGN43303.1| (hypothetical protein Csa_7G019830 [Cucumis sativus]) HSP 1 Score: 109.0 bits (271), Expect = 4.5e-21 Identity = 47/82 (57.32%), Postives = 61/82 (74.39%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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