Cla006111 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCCGATCATGACCCTCTCAAGAAACTAAACCTAAGGTTGCATTCTCGTACTTATTTACTTTTAGGTTTCTTATTGTCAACATTCTGTAAGGCCTCCAATTGTATTTACATATCAAAGGAGGGGTAAAAAGGGAATGATGGGGGATGAGGGCATACGTGGAGTTAGTTGAGATGGGGACCACTCAGATTGTTTAAGAAAGGAAAATGATAAAGTAAAAGGGTGTGGAATTTCAGAGAAGATACAACAACTTTTGGAGGAGGAGAGTAGTAGCAGCTATCGAATTGTGCTGAGTTATCTTTTGATTACTTGTTTTTTTGTGTACTGTTCCACTGAGTATTGGTGCTTGTTTTACCATTCTCAGTGTTTATGTTTCAGACTCTGTTTCCTTTTCCTCCAAGTAATACTATATCAGAGCATTGTACTCTGTTTTTGTTATCCATATCCCATAGCCATTTCTTGTTAGGTATTTGTTTGCAGGTGAAGGTTACCTAACACATTCTTTCCTCGTTTTTGTTTATTTGGATTTTATAGAGCGACGAGAAGTAAAAACAACATACTTGTTGTCCTTCCCTGTTTGTTGGTCTTTATTGTCCATTAATTGCTTTAGAAGTGTCATTCTTAGTGGAACTCAAGAGAGTCAGTGTTGTTCATTTCATGTTTTCTCCCACTCATGCTTGACACCATCCTCTTTGTATTTGATGAGGATGATCCTTTTGTCAACCTCATCAATAACTTTTCGCTTTCAAAGAGGTTCTCGATCTTGTGATTCATACCAATGCAAAGATCATCGTGACTGTTGATTCTTCAATCATAACATATCGAGGTGTGAATGGTTCTCTCTCCTCTCTCCTCTCTCCTACCTCTTCCTATCCCCCACTCTCTTACCCACGTCCTTCACCCATCATGCCAGAGCCACCACCAATGACCTTCACCTCTGGACTCTCCAACTCCTCCAACCATGATCAAAACCCAACCGCTCAACATGATTACAGTAGAAAGGAAGGTCTTCTCAATCGACATTGATCCAAACTCTCAAGGCAAAAGAGTCAAAATAACATAGTAGAATGGTGTCGCTCACTAATTTGCGGCCTAAAGGGAATGCCTTGGTATGACCTCTTTTCAATAACTTCTCAAAGACTAAGTGTAGCAATAGGCATAAAGGAAATTAAAAAAATGTATGGGAACGGAAAGAATAACACAAGTGTTGGTGTAAATCTTCTTGCCACCTTTTCGGCAAATGTCTTTTTGACTATCTCCTGTAATGTGATAGACGACCAAACATTTTCCTCCTGGGCACTGCCTGATAACCTCATGATGATAAAAGGGGAGATGATATATCTCTGGAAGGCTGAGTTGCAAAATAAATTCTTGATTGGCTATTATGTATAGAATCATAATGAGATAGTGCTGTTCTGTTATTTTAGCTGTATTGAATCTGAATTGCCTTCTTATTAAAGAAGAAAGCTATCAGGGAAACCCCCATCATGACCATAGAATGTTTAGGCTTGTCATCTTTTCATTTAACCCTCTGCTATGGTTTCTAATTTTTTCATATTGAGTACTTGATGGTGAACGTGAGAATTATTATGTACATTTGTTTACAGACATAAATGCTCTGCATGCTACAAGCAATATAAGAAGAAAGAGCATCTTATTGAGCATATGAGAGTTTCATATCACTCTGTTCATCAGCCTAGATGTGGAGTCTGCCTAAAGCATTGCAAATCATTTGAATCATTGAGGGAACATCTAAAGGGTAAGACAGTTTTGTGTACTTTTTATGGTAATATATCATAACACCATCTTATTATATCCAGTCTTTTAGGTCCACTTTCAAAGTCAAATTGTTCAAAAATATTCTTGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCCGGATCTCTCAGTGAGCACCAAGACATTTGCTGCCTAACAGCACCTGTTCACCAAGTAAGTCGCTCTCTATGCATCATATATCATATATGATTATTAATTAATAAGGTGCAAGGCCCCCGATACTTTTCGCATATAAGAGGAGGGGTAAAAGAGGAAGTAACAGGAGACCATTGTGGCAAGGGATGCTAACTTTGTGGATTTTAGATGGGGGATCCCAGAGTTTGCTATAAAGGGAAAGCATGGGAGTATGTGTGGAGGAGAATATTTTGAGGAAAGGCTGAAGGACCTTTCGAGGAGAGGATCACCAACCCTCTTGAATGTGCTGGTTTCACTGCTGTGTACTTGTTTCCTTTTTTGGTTATTGTAATTGAGACTATTTCATCATATTTCAGTATCAATATATCATCAGAGCTCTGTTGCTATGTTTTCTTCTATACTTGTTGGGATTTACTGAGTGCAGGGAAGTAGATACCTAACCTAAGGTTACTGATAGTTCTCGTAGAAAAAATAAGGTTACTGGTAGTTTATATTTTTGGATATATCGAGTAATTGAGCCATTTATTATGATGTCATACATGCATTTCAGAATTTGATTGGGGCTCTGATGTAGGGAACAAGTCTATTGCCAACTGATTTATCAGATTGTTATGATGAAGACCGTTCTGGAGCGATAGCTATGGATTGTGTAATGGCTGGCGGTGGAAGTGATGGTTCACTGGACATTTGTGTTTGGATCTGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCAATCACGAACTACAGGTACTTTAGAGAAGGTTTTAGGATTATCATGCTCTTCAGAGAAGGTTTTAGCTTTTAGAACCAGCCTGTAGATGCTCATTTCCCGGTCATGTTGTAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAAAGTCCAAGAAAAAGTATTAAGAATCTTGTTAAATGGAGAGTCCATTGAGAGATTGAGATTGAATGGTGGTAAAGCTAGGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCTTGAGAATGAATTATCCCGATCATATGTTAAGGTGATTTTCACTAACTTGGGTTCTAATTGTGTGTGGATTAGTTCACTTTTATACAAAATGCATTTTAACTCTGAAGTGATATGGTGAAATGCAATGCATAAAAAAGAAATCAAATACTACTTTTCGACCCTGGCTGGGAACATCTCCTGATTCTTAATATGTTATTGCTTGTAGTGATAAATTTTGTACTATGAGCTTTGTCTCAATGCATTATATCAATGAAAGAGACTGTTTCCTTTTAAAAAAAAAAAAAAAAAAACCTTACTTTTTGATCAAACATGTATTATCTTTCTCTAGTTTAGTTTAGTTTTGTATTATTCATAGCCAGACACCTTTGCCTGAAGTATTTTTTTTGCAGGGATACCGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGCCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTAAGATACTTTAATTATGATTTATACTGCTTTGAAAAATGATAGAGCAGTTGTTTTGTTTCTTTTCAACGGAAGCAATTTTTTTTGTAAATAAACAAACATAAAAACCTTCATTAATCTCTACAAAATGGGGATATAGAGAATTAAGATATCACCCAGCCAAAACCGAAACCTCAGGGATATGTGAAAAATGACCACGAATTAATGACAAAAAAGAGGGAAAATTATGTAAGACTCTACAAATCACTACAATTGGGGTAGTATGCCTTTTGTTTGTTGGCTTGTTTGGATCATAAGGGTTTGCTTTTAGCGAGATTTTTTCGTTGTATTTGAATATTATTGGGAGTGTTTTGTGAACAACAATTGAACGATTGATTTATGTATTTTTGTCTATTTATTAAATCTTTCATGTTGGGTCTTTAATGCTTATCATTGTGCTCCAATACCTCACGCACTGTCCATATTTGCTATGTATTAGGCTGGCCCATTAAGAATAACTGTAGTTTTAAAATGCTTTAGAATACATGAGTTGCATGTTAGTGGTCATTTGCATATTCCTAATTCCTAATATTTTTAGAGCTAGTCTTAGATCTTCAAAGCTGCTTTGATATCCACCAGAATGAAAAAATCTGTCCAACGCATCATAGAATGTTTACAGTCGAATATGGATGCTTTTTTATTTTATAATCAGCTATTGTGAGGGTCGAGGAAATGAACTTGAAACTAGACTTCTCGAGGAAATGTAAATATACCACCTTTCTGCATCTTCCACATTGAAGAATCAAATTCATTTGCCCTTGAAGAGTGGTATTTTTTCCACATTATTAGAAATTTTGAGTACGTTGCATGAGTGTAAAGAAGATGAAACATCTGATCATGTGGGTAGAAAATGGGAGAATGTTGTCTTAGTGGGTGCGTAACATAACATGTTCTCTTTATCTTGTTTCTAGCTTGTCAAGGATGATCCTTGAGGGTCGTGGTTTTGCAGGTATGATATTCGTCAGGGTGGGCACAACCCCTACGAGAATTGTGTATCAGTTATGCGATTGTACAAGAGAATGCGTAGTCTTGATCACCGTGGACAAGTTATGACCCCGTCGATTGCTCCTCCCCCTATCCAGTACGTTGCTCCCAATCTTGATTCCCATAGTGTAAAAGATCTTGAGAAGATGACCCCAGATGAACTCTATGAGATGTCGAGATCAAACTTTAAATGTTGGTGTCTTGACTCAAGGCGAGTAATGTAG ATGGACTCCGATCATGACCCTCTCAAGAAACTAAACCTAAGGTTGCATTCTCGTACTTATTTACTTTTAGGTCCACTTTCAAAGTCAAATTGTTCAAAAATATTCTTGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCCGGATCTCTCAGTGAGCACCAAGACATTTGCTGCCTAACAGCACCTGTTCACCAAGGAACAAGTCTATTGCCAACTGATTTATCAGATTGTTATGATGAAGACCGTTCTGGAGCGATAGCTATGGATTGTGTAATGGCTGGCGGTGGAAGTGATGGTTCACTGGACATTTGTGTTTGGATCTGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCAATCACGAACTACAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAAAGTCCAAGAAAAAGTATTAAGAATCTTGTTAAATGGAGAGTCCATTGAGAGATTGAGATTGAATGGTGGTAAAGCTAGGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCTTGAGAATGAATTATCCCGATCATATGTTAAGGGATACCGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGCCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTATGATATTCGTCAGGGTGGGCACAACCCCTACGAGAATTGTGTATCAGTTATGCGATTGTACAAGAGAATGCGTAGTCTTGATCACCGTGGACAAGTTATGACCCCGTCGATTGCTCCTCCCCCTATCCAGTACGTTGCTCCCAATCTTGATTCCCATAGTGTAAAAGATCTTGAGAAGATGACCCCAGATGAACTCTATGAGATGTCGAGATCAAACTTTAAATGTTGGTGTCTTGACTCAAGGCGAGTAATGTAG ATGGACTCCGATCATGACCCTCTCAAGAAACTAAACCTAAGGTTGCATTCTCGTACTTATTTACTTTTAGGTCCACTTTCAAAGTCAAATTGTTCAAAAATATTCTTGGAGCAAGGTTGTGGGCTTTGTTTGAGAGTACTTGATGGTCCCGGATCTCTCAGTGAGCACCAAGACATTTGCTGCCTAACAGCACCTGTTCACCAAGGAACAAGTCTATTGCCAACTGATTTATCAGATTGTTATGATGAAGACCGTTCTGGAGCGATAGCTATGGATTGTGTAATGGCTGGCGGTGGAAGTGATGGTTCACTGGACATTTGTGTTTGGATCTGCCTTGTTGATGAAGATGAGAAATTGATTTTCAATACTTTCGTACAACCACAAATACCAATCACGAACTACAGGCATGAAGTAACTGGGCTAAAGGAAGAACATATGAGGTATGCCATGCCACTGAAAAAAGTCCAAGAAAAAGTATTAAGAATCTTGTTAAATGGAGAGTCCATTGAGAGATTGAGATTGAATGGTGGTAAAGCTAGGCTTCTTGTCGGCCATGACTTGGAGCATGATTTAGATTGCTTGAGAATGAATTATCCCGATCATATGTTAAGGGATACCGCTAGATATCATCCATTGATGAAAACAAATTTGGTTAGCCATTCTCTCAAGTACCTTACTCGAGCATATTTGGGGTATGATATTCGTCAGGGTGGGCACAACCCCTACGAGAATTGTGTATCAGTTATGCGATTGTACAAGAGAATGCGTAGTCTTGATCACCGTGGACAAGTTATGACCCCGTCGATTGCTCCTCCCCCTATCCAGTACGTTGCTCCCAATCTTGATTCCCATAGTGTAAAAGATCTTGAGAAGATGACCCCAGATGAACTCTATGAGATGTCGAGATCAAACTTTAAATGTTGGTGTCTTGACTCAAGGCGAGTAATGTAG MDSDHDPLKKLNLRLHSRTYLLLGPLSKSNCSKIFLEQGCGLCLRVLDGPGSLSEHQDICCLTAPVHQGTSLLPTDLSDCYDEDRSGAIAMDCVMAGGGSDGSLDICVWICLVDEDEKLIFNTFVQPQIPITNYRHEVTGLKEEHMRYAMPLKKVQEKVLRILLNGESIERLRLNGGKARLLVGHDLEHDLDCLRMNYPDHMLRDTARYHPLMKTNLVSHSLKYLTRAYLGYDIRQGGHNPYENCVSVMRLYKRMRSLDHRGQVMTPSIAPPPIQYVAPNLDSHSVKDLEKMTPDELYEMSRSNFKCWCLDSRRVM
BLAST of Cla006111 vs. Swiss-Prot
Match: REXO4_YEAST (RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REX4 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.5e-20 Identity = 59/171 (34.50%), Postives = 92/171 (53.80%), Query Frame = 1
BLAST of Cla006111 vs. Swiss-Prot
Match: REXO4_KLULA (RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=REX4 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.8e-19 Identity = 55/167 (32.93%), Postives = 90/167 (53.89%), Query Frame = 1
BLAST of Cla006111 vs. Swiss-Prot
Match: REXO4_GIBZE (RNA exonuclease 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=REX4 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.8e-19 Identity = 56/176 (31.82%), Postives = 98/176 (55.68%), Query Frame = 1
BLAST of Cla006111 vs. Swiss-Prot
Match: REXO4_SCHPO (RNA exonuclease 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rex4 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.2e-18 Identity = 58/171 (33.92%), Postives = 93/171 (54.39%), Query Frame = 1
BLAST of Cla006111 vs. Swiss-Prot
Match: REXO4_HUMAN (RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV=2) HSP 1 Score: 93.2 bits (230), Expect = 5.5e-18 Identity = 53/167 (31.74%), Postives = 91/167 (54.49%), Query Frame = 1
BLAST of Cla006111 vs. TrEMBL
Match: A0A0A0KYE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G338960 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.5e-110 Identity = 195/214 (91.12%), Postives = 205/214 (95.79%), Query Frame = 1
BLAST of Cla006111 vs. TrEMBL
Match: I1MCY4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G023300 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 3.8e-103 Identity = 188/305 (61.64%), Postives = 233/305 (76.39%), Query Frame = 1
BLAST of Cla006111 vs. TrEMBL
Match: A0A0R0FUQ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G023300 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 3.8e-103 Identity = 188/305 (61.64%), Postives = 233/305 (76.39%), Query Frame = 1
BLAST of Cla006111 vs. TrEMBL
Match: A0A0B2RL39_GLYSO (RNA exonuclease 4 OS=Glycine soja GN=glysoja_022365 PE=4 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 5.0e-103 Identity = 187/305 (61.31%), Postives = 233/305 (76.39%), Query Frame = 1
BLAST of Cla006111 vs. TrEMBL
Match: C6THA2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G351300 PE=2 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 4.2e-102 Identity = 186/305 (60.98%), Postives = 232/305 (76.07%), Query Frame = 1
BLAST of Cla006111 vs. NCBI nr
Match: gi|778694140|ref|XP_011653750.1| (PREDICTED: apoptosis-enhancing nuclease isoform X1 [Cucumis sativus]) HSP 1 Score: 560.5 bits (1443), Expect = 1.9e-156 Identity = 270/299 (90.30%), Postives = 281/299 (93.98%), Query Frame = 1
BLAST of Cla006111 vs. NCBI nr
Match: gi|659069342|ref|XP_008449328.1| (PREDICTED: RNA exonuclease 4-like [Cucumis melo]) HSP 1 Score: 558.5 bits (1438), Expect = 7.3e-156 Identity = 268/298 (89.93%), Postives = 280/298 (93.96%), Query Frame = 1
BLAST of Cla006111 vs. NCBI nr
Match: gi|659131022|ref|XP_008465475.1| (PREDICTED: RNA exonuclease 4-like [Cucumis melo]) HSP 1 Score: 554.3 bits (1427), Expect = 1.4e-154 Identity = 267/298 (89.60%), Postives = 279/298 (93.62%), Query Frame = 1
BLAST of Cla006111 vs. NCBI nr
Match: gi|659111761|ref|XP_008455895.1| (PREDICTED: uncharacterized protein LOC103495972 isoform X1 [Cucumis melo]) HSP 1 Score: 545.4 bits (1404), Expect = 6.4e-152 Identity = 263/299 (87.96%), Postives = 278/299 (92.98%), Query Frame = 1
BLAST of Cla006111 vs. NCBI nr
Match: gi|449449811|ref|XP_004142658.1| (PREDICTED: apoptosis-enhancing nuclease isoform X2 [Cucumis sativus]) HSP 1 Score: 538.5 bits (1386), Expect = 7.8e-150 Identity = 272/348 (78.16%), Postives = 286/348 (82.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |