Cla006080 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGCTTCTCAATCAGTCCCTGAGAAGTCCATTCATGAATTCGTGGTGAAGGTAAATTCTCATCCTCCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAAGACGCTTCAAAACGGAATCTAACGAAGTAAGTCCTTTGGCCTGTTGAAGGATGCCAGAGGACAAGACGTTGACCTTAGTATCTACCGGGGAAAGGTTCTTCTTGTGGTAAATGTTGCTTCCAAATGGTGCGTCTTCTTTTTCTCTGTACTTTGTTCCTATCGGGTACTCGAATTCATGGGGTTCTAATTCCTGGAGAATTTTGAATTGTTTGGGCAGTGGTTACACAGATTCGAATTATACCCAGCTGACGGAACTTTACAGCAAATACAAAGAAAAAGGTCCGTACGTTTCTTACTTCTACTTCTATTGATTTTCCTAATTCTCATGTTAGCCAGAATTTTATTTCTTACAGGTATTGGTTCCTCTTCTTCTTTTGTGCAATGGTGGATTATTAGAGTTTCCTCGAAGGCTATACTATAATCTTCTCTTTGGTTTAGTTTGGTCCATCTGCTTTTTTACTTCGTTAACTGTATCTATACACTGATTTACAGGATTGGAGATCTTGGCTTTTCCATGCAATCAGTTTTTGAATCAGGAACCTGGATCCAGCGAGGAGGCACAGGAATTTGCCTGTACAAGATTCAAAGCCGAGTATCCAATATTCCAAAAGGTATTTTAGCGTTTTTTTTTTAGTGATTGTAGTTAGTTTGTTACCTATATTTTTTATTTTGTAACTAGAGCTAGTTAGATATGTTCTTAATTAAATTAACTCTTATACTGTACAGATAACCAGAGGCTTTTTCTGATAATTCAATGA ATGGGTGCTTCTCAATCAGTCCCTGAGAAGTCCATTCATGAATTCGTGGTGAAGGATGCCAGAGGACAAGACGTTGACCTTAGTATCTACCGGGGAAAGGTTCTTCTTGTGGTAAATGTTGCTTCCAAATGTGGTTACACAGATTCGAATTATACCCAGCTGACGGAACTTTACAGCAAATACAAAGAAAAAGGTATTGGTTCCTCTTCTTCTTTTGTGCAATGGATTGGAGATCTTGGCTTTTCCATGCAATCAGTTTTTGAATCAGGAACCTGGATCCAGCGAGGAGGCACAGGAATTTGCCTGTACAAGATTCAAAGCCGAGTATCCAATATTCCAAAAGATAACCAGAGGCTTTTTCTGATAATTCAATGA ATGGGTGCTTCTCAATCAGTCCCTGAGAAGTCCATTCATGAATTCGTGGTGAAGGATGCCAGAGGACAAGACGTTGACCTTAGTATCTACCGGGGAAAGGTTCTTCTTGTGGTAAATGTTGCTTCCAAATGTGGTTACACAGATTCGAATTATACCCAGCTGACGGAACTTTACAGCAAATACAAAGAAAAAGGTATTGGTTCCTCTTCTTCTTTTGTGCAATGGATTGGAGATCTTGGCTTTTCCATGCAATCAGTTTTTGAATCAGGAACCTGGATCCAGCGAGGAGGCACAGGAATTTGCCTGTACAAGATTCAAAGCCGAGTATCCAATATTCCAAAAGATAACCAGAGGCTTTTTCTGATAATTCAATGA MGASQSVPEKSIHEFVVKDARGQDVDLSIYRGKVLLVVNVASKCGYTDSNYTQLTELYSKYKEKGIGSSSSFVQWIGDLGFSMQSVFESGTWIQRGGTGICLYKIQSRVSNIPKDNQRLFLIIQ
BLAST of Cla006080 vs. Swiss-Prot
Match: GPX4_ARATH (Probable glutathione peroxidase 4 OS=Arabidopsis thaliana GN=GPX4 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.6e-21 Identity = 45/64 (70.31%), Postives = 58/64 (90.62%), Query Frame = 1
BLAST of Cla006080 vs. Swiss-Prot
Match: GPX5_ARATH (Probable glutathione peroxidase 5 OS=Arabidopsis thaliana GN=GPX5 PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.1e-21 Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 1
BLAST of Cla006080 vs. Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.8e-20 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 1
BLAST of Cla006080 vs. Swiss-Prot
Match: GPX4_MESCR (Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.1e-19 Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 1
BLAST of Cla006080 vs. Swiss-Prot
Match: GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 4.3e-19 Identity = 43/64 (67.19%), Postives = 54/64 (84.38%), Query Frame = 1
BLAST of Cla006080 vs. TrEMBL
Match: A0A0A0KE99_CUCSA (Glutathione peroxidase OS=Cucumis sativus GN=Csa_6G408810 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 2.5e-26 Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 1
BLAST of Cla006080 vs. TrEMBL
Match: J7H437_9ROSI (Glutathione peroxidase OS=Dimocarpus longan PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-24 Identity = 56/65 (86.15%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Cla006080 vs. TrEMBL
Match: I6PBY3_9ROSI (Glutathione peroxidase OS=Dimocarpus longan PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.8e-24 Identity = 56/65 (86.15%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Cla006080 vs. TrEMBL
Match: B9T4A6_RICCO (Glutathione peroxidase OS=Ricinus communis GN=RCOM_0176350 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 3.1e-24 Identity = 56/65 (86.15%), Postives = 63/65 (96.92%), Query Frame = 1
BLAST of Cla006080 vs. TrEMBL
Match: A0A0B0PMW5_GOSAR (Glutathione peroxidase OS=Gossypium arboreum GN=F383_10473 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.3e-24 Identity = 54/66 (81.82%), Postives = 65/66 (98.48%), Query Frame = 1
BLAST of Cla006080 vs. NCBI nr
Match: gi|659096990|ref|XP_008449386.1| (PREDICTED: probable glutathione peroxidase 5 [Cucumis melo]) HSP 1 Score: 128.6 bits (322), Expect = 7.4e-27 Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1
BLAST of Cla006080 vs. NCBI nr
Match: gi|449444653|ref|XP_004140088.1| (PREDICTED: probable glutathione peroxidase 5 [Cucumis sativus]) HSP 1 Score: 126.3 bits (316), Expect = 3.6e-26 Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 1
BLAST of Cla006080 vs. NCBI nr
Match: gi|380862970|gb|AFF18778.1| (glutathione peroxidase [Dimocarpus longan]) HSP 1 Score: 120.2 bits (300), Expect = 2.6e-24 Identity = 56/65 (86.15%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Cla006080 vs. NCBI nr
Match: gi|400532033|gb|AFP87136.1| (glutathione peroxidase 3 [Dimocarpus longan]) HSP 1 Score: 120.2 bits (300), Expect = 2.6e-24 Identity = 56/65 (86.15%), Postives = 64/65 (98.46%), Query Frame = 1
BLAST of Cla006080 vs. NCBI nr
Match: gi|223527139|gb|EEF29314.1| (glutathione peroxidase, putative [Ricinus communis]) HSP 1 Score: 119.4 bits (298), Expect = 4.5e-24 Identity = 56/65 (86.15%), Postives = 63/65 (96.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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