Cla005949 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla005949
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1); contains Interpro domain(s) IPR001810 Cyclin-like F-box
Location	Chr7 : 1625314 .. 1626390 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATGAGAACAACAATCCCTTACCAGATGACATAACAATCGAAATTCTTCAACACTTCTCTCTAAGATCACTCGCCATTGCAAACTGCGTCTCTAAGCTTTGGCAATCCTTCATTTCCACAAAATCTCTCCTTCTTCACACCCCTTTGTCCCTTCCTCTCCGCCATGGCTTCTTCTTTCAAAGCTCCCAAATCCCCAAATATGGCGTCCCAATTCACTTCTTCCCTTCATCTCTCACTTCTCTAAACAAAACCCATTTCCCCAATCTCCGTCTTCTCGCCTCCAGCAATGGCCTCCTTCTCTGCGGCAAACCCAATCAAAACCCCATCATCAATTACTCTGTTTTCAATCCCTCTTCAAATCAACTCATTCCCATCCCCAAACCAACCAATCTCATCGCCAGTGTCAAAATCGGGTTCCATTCTCATGATTCTGTTTCTTTTACTATCCTTCGATTTGTCAATTTTGGGTTTAACCCAATGGAGATTTTCGCCTCGGAAACAGGGGAATGGCGGCGGTTGTCTTTCGGTTTGGTTATCGATTCGTTGTTTTTGCCCTTTGAAGGCCCATCGGCGGTTGTTTTAAACGGAGTGTTTTACTGGTTGGAGTTCAATGCCATTATTTACGCCTTTGATTTGCTTAGAAATGAGTTTTATGAAGTGAGATTTCCGTCTGAAGAAACAGAGTATCGCCGTAATGTGTTGTCCCGCTGCCTCGCCGTCGCCGGTGGGAGGCTGATGATGGCGTCGACCGATGGGGAGTTTGTTGAGATTAGGGTTCTTCAAGATAGGGATTGTTCGTGGGGCTTGAAGTGTAGATTGAACGTTGAAACTCTTGTTGGCATTAACGCAAACACCTTGTGCGCAACTGCGGAGACGGCGGCGACTGGGCGGAGATTTTTAGGGATTGTGGGGTTTCAGGGAAGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGATGTGATTTGTTGCGATGTTGGAAGTGGAAAAGTTGAAATTGTTCATACATTTGATGGAGCTTTGAAGTGTACGGATGTTTCTAACTTCAGGTTTTTCCCTTATCAGTGCTAG

mRNA sequence

ATGGCAGATGAGAACAACAATCCCTTACCAGATGACATAACAATCGAAATTCTTCAACACTTCTCTCTAAGATCACTCGCCATTGCAAACTGCGTCTCTAAGCTTTGGCAATCCTTCATTTCCACAAAATCTCTCCTTCTTCACACCCCTTTGTCCCTTCCTCTCCGCCATGGCTTCTTCTTTCAAAGCTCCCAAATCCCCAAATATGGCGTCCCAATTCACTTCTTCCCTTCATCTCTCACTTCTCTAAACAAAACCCATTTCCCCAATCTCCGTCTTCTCGCCTCCAGCAATGGCCTCCTTCTCTGCGGCAAACCCAATCAAAACCCCATCATCAATTACTCTGTTTTCAATCCCTCTTCAAATCAACTCATTCCCATCCCCAAACCAACCAATCTCATCGCCAGTGTCAAAATCGGGTTCCATTCTCATGATTCTGTTTCTTTTACTATCCTTCGATTTGTCAATTTTGGGTTTAACCCAATGGAGATTTTCGCCTCGGAAACAGGGGAATGGCGGCGGTTGTCTTTCGGTTTGGTTATCGATTCGTTGTTTTTGCCCTTTGAAGGCCCATCGGCGGTTGTTTTAAACGGAGTGTTTTACTGGTTGGAGTTCAATGCCATTATTTACGCCTTTGATTTGCTTAGAAATGAGTTTTATGAAGTGAGATTTCCGTCTGAAGAAACAGAGTATCGCCGTAATGTGTTGTCCCGCTGCCTCGCCGTCGCCGGTGGGAGGCTGATGATGGCGTCGACCGATGGGGAGTTTGTTGAGATTAGGGTTCTTCAAGATAGGGATTGTTCGTGGGGCTTGAAGTGTAGATTGAACGTTGAAACTCTTGTTGGCATTAACGCAAACACCTTGTGCGCAACTGCGGAGACGGCGGCGACTGGGCGGAGATTTTTAGGGATTGTGGGGTTTCAGGGAAGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGATGTGATTTGTTGCGATGTTGGAAGTGGAAAAGTTGAAATTGTTCATACATTTGATGGAGCTTTGAAGTGTACGGATGTTTCTAACTTCAGGTTTTTCCCTTATCAGTGCTAG

Coding sequence (CDS)

ATGGCAGATGAGAACAACAATCCCTTACCAGATGACATAACAATCGAAATTCTTCAACACTTCTCTCTAAGATCACTCGCCATTGCAAACTGCGTCTCTAAGCTTTGGCAATCCTTCATTTCCACAAAATCTCTCCTTCTTCACACCCCTTTGTCCCTTCCTCTCCGCCATGGCTTCTTCTTTCAAAGCTCCCAAATCCCCAAATATGGCGTCCCAATTCACTTCTTCCCTTCATCTCTCACTTCTCTAAACAAAACCCATTTCCCCAATCTCCGTCTTCTCGCCTCCAGCAATGGCCTCCTTCTCTGCGGCAAACCCAATCAAAACCCCATCATCAATTACTCTGTTTTCAATCCCTCTTCAAATCAACTCATTCCCATCCCCAAACCAACCAATCTCATCGCCAGTGTCAAAATCGGGTTCCATTCTCATGATTCTGTTTCTTTTACTATCCTTCGATTTGTCAATTTTGGGTTTAACCCAATGGAGATTTTCGCCTCGGAAACAGGGGAATGGCGGCGGTTGTCTTTCGGTTTGGTTATCGATTCGTTGTTTTTGCCCTTTGAAGGCCCATCGGCGGTTGTTTTAAACGGAGTGTTTTACTGGTTGGAGTTCAATGCCATTATTTACGCCTTTGATTTGCTTAGAAATGAGTTTTATGAAGTGAGATTTCCGTCTGAAGAAACAGAGTATCGCCGTAATGTGTTGTCCCGCTGCCTCGCCGTCGCCGGTGGGAGGCTGATGATGGCGTCGACCGATGGGGAGTTTGTTGAGATTAGGGTTCTTCAAGATAGGGATTGTTCGTGGGGCTTGAAGTGTAGATTGAACGTTGAAACTCTTGTTGGCATTAACGCAAACACCTTGTGCGCAACTGCGGAGACGGCGGCGACTGGGCGGAGATTTTTAGGGATTGTGGGGTTTCAGGGAAGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGATGTGATTTGTTGCGATGTTGGAAGTGGAAAAGTTGAAATTGTTCATACATTTGATGGAGCTTTGAAGTGTACGGATGTTTCTAACTTCAGGTTTTTCCCTTATCAGTGCTAG

Protein sequence

MADENNNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTPLSLPLRHGFFFQSSQIPKYGVPIHFFPSSLTSLNKTHFPNLRLLASSNGLLLCGKPNQNPIINYSVFNPSSNQLIPIPKPTNLIASVKIGFHSHDSVSFTILRFVNFGFNPMEIFASETGEWRRLSFGLVIDSLFLPFEGPSAVVLNGVFYWLEFNAIIYAFDLLRNEFYEVRFPSEETEYRRNVLSRCLAVAGGRLMMASTDGEFVEIRVLQDRDCSWGLKCRLNVETLVGINANTLCATAETAATGRRFLGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIVHTFDGALKCTDVSNFRFFPYQC

Homology

[Close]

BLAST of Cla005949 vs. Swiss-Prot
Match: FB36_ARATH (Putative F-box protein At1g46984 OS=Arabidopsis thaliana GN=At1g46984 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.4e-08
Identity = 70/245 (28.57%), Postives = 107/245 (43.67%), Query Frame = 1


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFIS----TKSLLLHTP----LSLPLRHGFF 68
           LP D+ IEIL    + S+AI   VSK W S +     T+S L+ +P    L   +R+G  
Sbjct: 24  LPIDLIIEILSRLPMNSIAICRLVSKQWASILQSSDFTESFLIKSPPRPRLLFTIRYGSK 83

Query: 69  FQSSQIPKYGVPIHF---FPSSLTSLNKTHFPNLRL---------LASSNGLLLCGKPNQ 128
           +     P+   P +F   FP   T  +K    N  +         +  +N L L GK ++
Sbjct: 84  WHLFSAPQ---PRNFDENFPVVATDYHKGFSGNWCMQSFQLVNGFIYLNNRLSLKGKIDR 143

Query: 129 NPIINYSVFNPSSNQLIPIPKPTNLIASVKIGFHSHDSVSFTILRFVNFGFNPME----- 188
             +I    +NPS+ Q IP+P          +G  +  S SF       FG++P+E     
Sbjct: 144 VSVI----WNPSTGQQIPLPD---------LGVKNSHSKSF-------FGYDPIEKQFKV 203

Query: 189 --IFASET------GEWRRLSFGLVIDSL-FLPFEGPSAVVLNGVFYWLEFNAIIYAFDL 220
             I +S+       G  R+LS+  +  S    P +  + + +NGV Y+   NA+I  FD+
Sbjct: 204 LCITSSKEHQVLTLGTGRKLSWRKIEYSYPHYPRKKSNGICINGVLYYRNTNAMIVRFDV 245

[Close]

BLAST of Cla005949 vs. Swiss-Prot
Match: FB260_ARATH (F-box protein At5g18160 OS=Arabidopsis thaliana GN=At5g18160 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.9e-07
Identity = 70/273 (25.64%), Postives = 107/273 (39.19%), Query Frame = 1


Query: 6   NNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLH--TPLSLPLRHGFFFQS 65
           +N +P DITIEIL     +S+  +  VSKLW S  +T   + H     S P     F + 
Sbjct: 31  SNSIPLDITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFIKHRSKKTSPPCVLLIFRKH 90

Query: 66  SQIPKYGVPIHFFPSSLTSLNKTHFPN---LRLLASSNGLLLCGKPNQNPIINYSVFNPS 125
            ++  +  P H    S         P    +R L S +G L+C + ++  +I     NP+
Sbjct: 91  DKLIVFSSPQHQNTYSHVQDYHIEIPKNGFIRRLDSVHG-LICLEGSKQLVI----CNPT 150

Query: 126 SNQLIPIPKPTNLIASVKI-GFHSHDSV--SFTILRFVNFGFNPMEIFASETGEWRRLSF 185
             +  P+P+P        + GF  ++ +   +  L  V  G+N   +       WR    
Sbjct: 151 LKRFFPLPEPQGTGDEYNVGGFLGYEPIEGKYKALCIVR-GWNTQVLTLEIQESWRVTKP 210

Query: 186 GLVIDSLFLPFEGPSAVVLNGVFYWLEF------NAIIYAFDLLRNEFYEVRFPSEETEY 245
           G        P +     + NGV Y+           +I+ FDL   EF  + FP      
Sbjct: 211 GYT----HWPTKDTGRCI-NGVIYYKAIIFDRVPRHVIFGFDLRYEEFTHIEFP------ 270

Query: 246 RRNVLSRCLAVAGGRLMMASTDGEFVEIRVLQD 265
            RN     +    GRL + S+    VEI  L+D
Sbjct: 271 MRNYDRFLMVSYEGRLALISSTSSVVEIWSLED 286

[Close]

BLAST of Cla005949 vs. Swiss-Prot
Match: FB300_ARATH (F-box protein At5g65850 OS=Arabidopsis thaliana GN=At5g65850 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.8e-07
Identity = 74/292 (25.34%), Postives = 115/292 (39.38%), Query Frame = 1


Query: 4   ENNNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLL-------LHTP--LSLP 63
           E +  +P DI IEIL     +S+A   CVSKLW S I  +          LH P  L   
Sbjct: 30  EKSVQIPVDIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTELFLTRSLHRPQLLFCC 89

Query: 64  LRHG--FFFQSSQIPKYGVPIHFFPSSLTSLNKTHFPNLRLLASSNGLLLCGKPNQNPII 123
            + G  FFF S Q+        +  SS  SL K      ++    NGL+   +   N  +
Sbjct: 90  KKDGNLFFFSSPQLQN-----PYENSSAISL-KNFSLCYKISRPVNGLICFKRKEMNETV 149

Query: 124 NYSVFNPSSNQLIPIPKPTNLIASVKIG---FHSHDSVSFTILRFVNFGFNPMEIFASET 183
              + NPS+   + +PKP        IG   F  ++ +       +++  +  ++    T
Sbjct: 150 TV-ICNPSTGHTLSLPKP----MKTSIGPSRFFVYEPIQKQFKVLLSYKSDEHQVLTLGT 209

Query: 184 GE--WRRLSFGLVIDSLFLPFEGPSAVVLNGVFYWLEFNA-----IIYAFDLLRNEFYEV 243
           GE  WR      +I+       G S + +NGV Y+   N      II  FD+   +F   
Sbjct: 210 GELSWR------IIECSMPHILGMSEICINGVLYYPAINLSSGDYIIVCFDVRSEKF--- 269

Query: 244 RFPSEETEYRR--------NVLSRCLAVAGGRLMMASTDGEFVEIRVLQDRD 267
           RF +   E+ +        N   +  ++   R        + +E+ VLQD +
Sbjct: 270 RFITVMEEFIKAAHDGTLINYNGKLASLVSERYCFVDGRSKSIELWVLQDAE 301

[Close]

BLAST of Cla005949 vs. Swiss-Prot
Match: FB145_ARATH (Putative F-box protein At3g16210 OS=Arabidopsis thaliana GN=At3g16210 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06
Identity = 70/312 (22.44%), Postives = 125/312 (40.06%), Query Frame = 1


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTPLSLPLRHGFFFQSSQIPK 68
           LP+++ IEIL   S++ LA   CV K W+  I+            P +   F+  +    
Sbjct: 5   LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKN---F 64

Query: 69  YGVPIHFFPSSLTSLNKTHFP-NLRLLASSNGLLLCGKPNQNPIINYS--VFNPSSNQLI 128
           Y + +      +T  NK  FP +  ++  S  +L C       + N++  V+NP S Q  
Sbjct: 65  YMLDVEGKHPVIT--NKLDFPLDQSMIDESTCVLHCDGTLCVTLKNHTLMVWNPFSKQFK 124

Query: 129 PIPKPTNLIASVKIGFHSHDSV--SFTILRFVN-FGFNPMEIFASETGEWRRLSFGLVID 188
            +P P     S  +GF  +D V   + ++ F++    +   +F   TG W      L I 
Sbjct: 125 IVPNPGIYQDSNILGF-GYDPVHDDYKVVTFIDRLDVSTAHVFEFRTGSWGE---SLRIS 184

Query: 189 SLFLPFEGPSAVVLNGVFYWLEFNA----IIYAFDLLRNEFYEVRFPSEETEYRRNVLSR 248
                +       L+   YW+ + +     I  F+L  +E+ ++  P     Y + V S 
Sbjct: 185 YPDWHYRDRRGTFLDQYLYWIAYRSSADRFILCFNLSTHEYRKLPLP----VYNQGVTSS 244

Query: 249 CLAVAGGRLMMASTDGEFVEIRV-LQDRDCSWGLKCRLNVETLVGINANTLCATAETAAT 308
            L V   +L +   +    EIR+ + ++  SW     L++ + + +         E  + 
Sbjct: 245 WLGVTSQKLCITEYEMCKKEIRISVMEKTGSWSKIISLSMSSFISVQDRIYDYQVEFVSF 303

Query: 309 GRRFLGIVGFQG 310
            R+   +V F G
Sbjct: 305 TRKNDLVVTFTG 303

[Close]

BLAST of Cla005949 vs. Swiss-Prot
Match: FB30_ARATH (Putative F-box protein At1g32420 OS=Arabidopsis thaliana GN=At1g32420 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06
Identity = 72/284 (25.35%), Postives = 118/284 (41.55%), Query Frame = 1


Query: 6   NNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFISTK-----SLLLHTPLSLPLRHGFF 65
           N  +P D+T+EIL+    +SL    CVSK W S IS++     S++  +    P R    
Sbjct: 34  NVNIPLDLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQPPPRDIKL 93

Query: 66  FQSSQIPKYGVPIHFFPSSLTSLNKTHFPNLRLLASS----NGLLLCGKPNQNPIINYSV 125
               Q+  Y  P HFF  S T    T   +L   ASS     GL+ C       +    +
Sbjct: 94  IFHHQV-LYPGP-HFFIFSSTYPQNTDKESLTTRASSYHYVRGLICCWSHCPTTV---DI 153

Query: 126 FNPSSNQLIPIPKPTNLIASVKIGFHSHDSV----SFTILRFVNFGFNPMEIFASETGE- 185
           +NP++ Q   +P  TN    ++  F  +D V       +L       +P ++F    G+ 
Sbjct: 154 YNPTTRQYYTVP-DTNRYQYIETCFFGYDPVENQYKVMVLPKYYMEESPCQVFT--VGDP 213

Query: 186 ----WRRLSFGLVIDSLFLPFEGPSAVVLNGVFYWLEFNA-----IIYAFDLLRNEFYEV 245
               WR       I  + + F    AV +NGV Y+   N       + +FD+   +F  V
Sbjct: 214 IEKPWRD------IQGIGVHFLLKDAVCINGVIYYQATNEYGSTYFLVSFDVRSEKFNHV 273

Query: 246 RFPSEETEYRRNVLSRCLAVAGGRLMMASTDGEFVEIRVLQDRD 267
           + P   T++   +++       G+L +     + +EI V++D +
Sbjct: 274 KAPKILTDHPCTLIN-----YQGKLGLIMCCKKGLEIWVMEDAE 298

[Close]

BLAST of Cla005949 vs. TrEMBL
Match: A0A0A0L8X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G609260 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 8.9e-157
Identity = 278/346 (80.35%), Postives = 304/346 (87.86%), Query Frame = 1


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTPLSLPLRHGFFFQSSQIPK 68
           +PDDITIEILQ+FSLRSLAIAN VSKLWQSFI TKSL LHTPLS P+ HGFFFQSS IPK
Sbjct: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65

Query: 69  YGVPIHFFPSSLTSLNKTHFPNLRLLASSNGLLLCGKPNQNPIINYSVFNPSSNQLIPIP 128
            G PIHFFPSS TSL KT+FPNLRLLASSNGLLLC KPNQNPII+YSVFNPS+ QLIPIP
Sbjct: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125

Query: 129 KPTNLIASVKIGFHSHDSVSFTILRFVNFGFNPMEIFASETGEWRRLSFGLVIDSLFLPF 188
           KP+NLI+SVKIGFHSHDSVSFTILRFVNFGF PMEIFASETGEWRRL F L +D++F PF
Sbjct: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185

Query: 189 EGPSAVVLNGVFYWLEFNAIIYAFDLLRNEFYEVRFPSEETEYRRNVLSRCLAVAGGRLM 248
           EGPSAVVLNGVFYWLEFN+ IYAFDLLRNEFY+V FPSEETEY RNVL RCLA+AGGRL+
Sbjct: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245

Query: 249 MASTDGEFVEIRVLQDRDCSWGLKCRLNVETLVGINANTLCATAETAATGRRFLGIVGFQ 308
           MASTDG+ VEIRVL++RDC WGLKCRL VE++VGIN N LC  AE+     R +GIVGFQ
Sbjct: 246 MASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAES----ERLVGIVGFQ 305

Query: 309 GRDSERIYLNTTEDVICCDVGSGKVEIVHTFDGALKCTDVSNFRFF 355
           GRDSERIY+NTTE VICC VGSGKVEIV+ FD  L+  DVS+F FF
Sbjct: 306 GRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFF 347

[Close]

BLAST of Cla005949 vs. TrEMBL
Match: M1CB75_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024780 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 9.6e-18
Identity = 98/369 (26.56%), Postives = 155/369 (42.01%), Query Frame = 1


Query: 11  DDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTP----LSLPLRHGFFFQSSQI 70
           DDI I IL     +SLA   CVSK W+ +I+  SL            P   GFF+Q+   
Sbjct: 18  DDIVINILHRLPSKSLARFKCVSKCWRKYIADSSLSYSCRSRRWRPQPYLIGFFYQARDT 77

Query: 71  PKYGVPIHFFPSSLTSLN-KTHFP--------NLRLLASSNGLLLCGKPNQNPIINYSVF 130
            +      FF S  +SL+  + F         +  ++ASSNG LLC +        Y V+
Sbjct: 78  CERSKIQFFFSSEESSLDIDSSFDQSVSFLGRSAYIVASSNGFLLCNRQRV-----YYVY 137

Query: 131 NPSSNQLIPIPKPTNLIASVKIGF------HSHDSVSFTILRFVNFGFN-PMEIFASETG 190
           NP++ Q + +PK    +    IGF       + D +SFTI+R+     N  +E F+SET 
Sbjct: 138 NPATRQRMALPKTQIGMNDPTIGFICKVDDPNRDVISFTIVRYWIVQSNVTIESFSSETN 197

Query: 191 EWRRLSFGLVIDSL----------FLPFEGPSAVVLNGVFYWLEFNAIIYAFDLLRNEFY 250
            W       ++D+L          F+  + PSA V++GVF+WL+    I  +D +   F+
Sbjct: 198 AW-------IVDNLILNVPLRLYFFVYMKSPSAGVVDGVFFWLDQGPQITVYDSVHKSFW 257

Query: 251 EVRFPSEETEYRRNVLSRCLAVAGGRLMMASTDGEFVEIRVLQDRDCSWGLKCRLNVETL 310
            + FP +              VA G   +  + G+F     ++     W LK  +     
Sbjct: 258 ALGFPED-------------MVATGNYFLGFSGGDFYFALYIKTNITVWQLKSNIRSRDA 317

Query: 311 VGINANTLCATAETAATGRRFLGIVGFQGRDSERI----------YLNTTEDVICCDVGS 340
           + +         + A T     G+ GF   + + +          YL+    VI  D+ +
Sbjct: 318 LWVRK----YVTDVATTVP--FGLTGFLHTEVQNMDIHPAIPHIFYLDVKGKVISYDMET 355

[Close]

BLAST of Cla005949 vs. TrEMBL
Match: M1DFM1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400037851 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-16
Identity = 88/312 (28.21%), Postives = 137/312 (43.91%), Query Frame = 1


Query: 11  DDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTPLSLPLRHGFFFQSSQIPKYG 70
           +DI I+IL     + LA   CVSK W+ +I+         +  P   GFF Q S+I +  
Sbjct: 17  EDIMIKILDFLPSKCLAKFKCVSKCWEKYIA--DCRCRRWIQKPYLVGFFCQHSEIQR-- 76

Query: 71  VPIHFFPSSLT----------SLNKTHFPN-LRLLASSNGLLLCGKPNQNPIINYSVFNP 130
             + FF SS +          SL+   F    RL+A+SNG LLC        ++Y V+NP
Sbjct: 77  -ELRFFLSSSSTKDHSGTFVGSLDHNLFHRKARLVAASNGFLLCNVKK----VHYYVYNP 136

Query: 131 SSNQLIPIPK-------------PTNLIASVKIGFHSHDSVSFTILRFVNFGFNP----- 190
           +++Q + +PK             P   I  V    +  D +SFTI+R+     NP     
Sbjct: 137 ATSQFLVLPKTQICMEDDDNNPPPVGFICKVDNPDNKDDIISFTIVRYA-IPLNPSNLQF 196

Query: 191 ---MEIFASETGEWRRLSFGLVIDSLFLP---FEGPSAVVLNGVFYWLEFNAIIYAFDLL 250
              +E F+SET  W      L +     P    + PSA V++GVFYW + +  I  +D +
Sbjct: 197 AVTIESFSSETNVWTANKITLEVPIRLFPCTFMKSPSASVIDGVFYWYDDSLQITVYDSI 256

Query: 251 RNEFYEVRFPSEETEYRRNVLSRCLAVAGGRLMMA------STDGEFVEIRVLQDRDCSW 282
              F++++ P    +  R +    L  + G L  A       T   +     +++RD  W
Sbjct: 257 HKSFWDLKLPE---DMERGIGCGYLGSSAGGLYFALNIIFKGTVIVWYLASNIRNRDAVW 315

[Close]

BLAST of Cla005949 vs. TrEMBL
Match: A0A166J9D5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004585 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.6e-12
Identity = 95/357 (26.61%), Postives = 147/357 (41.18%), Query Frame = 1


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTPLSLPLRHGF-----FFQS 68
           LPD + +EILQ   L+S+     VSK W S IS         L +  ++ +      F S
Sbjct: 402 LPDSMLMEILQKLPLKSIFCFKSVSKHWFSLISNPKFAKSYTLQIFTKNNYSPPCAIFSS 461

Query: 69  SQIPKYGVPIHFFPSSLTSLN-KTHF-------PNLRLLASSNGLLLCGKPNQNPIINYS 128
                +   +      L   N    F        + +LL SSNGLLL    + + I++Y 
Sbjct: 462 LDQMGFQERVLMRDQELAHTNFSLQFLGPIIGQASTKLLDSSNGLLLLCSMSDSQILDYY 521

Query: 129 VFNPSSNQLIPIPKPTNLIASVKIGFHSHD-SVSFTILRFVNFGFNP----MEIFASETG 188
           V NP + + + +P+P      VK        S +F ++R     F       EIF+S+ G
Sbjct: 522 VCNPLTMKWVCLPQPLRQPKWVKAAILVEKVSGNFLVVRVAELLFRSKVFNFEIFSSKLG 581

Query: 189 EWRRLSFGLVIDSLFLPFEGPSAVVLNGVFYWLEFNAIIYAFDL--LRNEFYEVRFPSEE 248
           EWR L+        F   +    V  NG+  WL  N  I AFD     N+ + +  P + 
Sbjct: 582 EWRDLTMNCSRRIRFF-VKARHTVCYNGMILWLVDNHTILAFDPEGNTNDCHFIDLPPDT 641

Query: 249 TEYRRNVLSRCLAVAGGRLMMASTDGEFVEIR-------VLQDRDC-SWGLKCRLNV-ET 308
                 VL       G    M  ++ ++ E R        L+D D   W L+CR+ + E 
Sbjct: 642 ESMHLGVLG---VSCGLLCYMEVSNNKYEEFREQSLGVWTLKDYDAGEWCLECRIQLNEF 701

Query: 309 LVGINANTLCATAETAATGRRFLGIVGFQGRDSERIYLNTTEDVICCDVGSGKVEIV 337
             G +A+      +TA   R     +GF   D + ++L     + CC+V +  V+IV
Sbjct: 702 WCGDDASDNRWDPDTALCTRP----LGFHPFDFDMVFLEQGRRLYCCNVSTRVVKIV 750

[Close]

BLAST of Cla005949 vs. TrEMBL
Match: A0A166J9D5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004585 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-10
Identity = 92/386 (23.83%), Postives = 165/386 (42.75%), Query Frame = 1


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFIS--------TKSL-----------LLHT 68
           LPD + +EI Q   L+S+ ++  VSK W S IS        T+++           L  T
Sbjct: 4   LPDPLLLEIFQKLPLKSVFLSESVSKHWLSLISDPFFARSYTRNITTTNNYTPPWTLFST 63

Query: 69  PLSLPLRHGFFFQSSQIPKYGVPIHFFPSSLTSLNKTHFPNLRLLASSNGLLL-CGKPNQ 128
              + L      +  ++    + + F    + S+N+    +L+LL SS GLLL C   + 
Sbjct: 64  FHEVSLDERAIIRDPELVNIDISLRFMIPVIYSVNQAAV-SLKLLDSSKGLLLACSLNDD 123

Query: 129 NPIINYSVFNPSSNQLIPIPKPTNLIASVK-IGFHSHDSVSFTILRFVNFG-----FNPM 188
           + +++Y V NP + + + +PK  +    VK +     DS  + ++R V        FN  
Sbjct: 124 SQVLDYFVCNPLTKKWVGLPKFLSQPKWVKAVIMVDDDSGDYFVVRIVQLTCYSKVFN-F 183

Query: 189 EIFASETGEWRRLSFGLVIDSLFLPFEGPSAVVLNGVFYWLEFNAIIYAFDLLRNEFYEV 248
           E+F+SE+ +W+ +         F        V  NG+ + L  N  I  FD  R++  + 
Sbjct: 184 EVFSSESSQWKYVKVCCEKGLRFFVMR-RHTVCYNGLIHCLADNHTILVFD-PRSDGSKC 243

Query: 249 RFPSEETEYRRNVLSRCLAVAG-----------GRLMMASTDGEFVEIRVLQDRDC-SWG 308
           R      +   + +SR + V G               +  T+   + + +L+D D   W 
Sbjct: 244 RL----IDLPCDRVSRIVGVIGVSCGFMRYVEVADTYLEPTEEPSLGVWLLKDYDAGEWI 303

Query: 309 LKCRLNVETLVGINANTLCATAETAATGRRFLGIVGFQGRDSERIYLNTTEDVICCDVGS 357
           L+ R+ +       ++ L  T+  +  G      V F   D + +YLN +  +ICC + +
Sbjct: 304 LEYRIELSEFC---SSDLYVTSMFSRLG-DITRAVAFHPFDRDIVYLNCSSHLICCQLST 363

HSP 2 Score: 82.0 bits (201), Expect = 1.6e-12
Identity = 95/376 (25.27%), Postives = 156/376 (41.49%), Query Frame = 1


Query: 1   MADENNNPLPDDITIEILQHFSLRSLAIANCVSKLWQSFIS------------TKSLLLH 60
           + D++N  +PD +  EILQ   ++ +    CVSK W   IS              SL   
Sbjct: 14  LIDDSN--IPDWLLTEILQRLPVKHIFKFKCVSKRWFILISDPFFARLYSTRINTSLSTS 73

Query: 61  TPLSLPLRHGF---------------FFQSSQIPKYGVPIHFFPSSLTSLNKTHFPNLRL 120
            P +L  R+ +                 QS      G  ++F P S       H   +++
Sbjct: 74  PPWNLLFRYLYEVRIVPSSMIDTRIALQQSQDFSSPGFSLNFLPYS------KHDCPIKI 133

Query: 121 LASSNGLLLCGKPNQNPIINYSVFNPSSNQLIPIPKPTNLIASVKIGFHSHDSVSFTILR 180
           LASSNGLLLC +       NY + NP   Q I +PKP   I SV +GF   D   + ++R
Sbjct: 134 LASSNGLLLCCETFYWQ-KNYYICNPLIQQWIALPKPPKAIKSVAVGFICKDG-HYEVIR 193

Query: 181 FVNFGFNP-----MEIFASETGEWRRLSFGLVIDSLFLPFEGPSAVVLNGVFYWLEF-NA 240
           F    + P     +E F+SETG+W        +   ++  + P  V  NG  +WLEF ++
Sbjct: 194 FPTANYGPSNTLRLETFSSETGKWHCSIVNCPVLDYYIKTDSP-VVHYNGSLHWLEFRHS 253

Query: 241 IIYAFDLLRNEFYEVRFPSEETEYRRNVLSRCLAVAGGRL-MMASTDGEF----VEIRVL 300
            I  +D        +   +   + +   LS  L V+ GR      TD  F    + + VL
Sbjct: 254 KIITYDPHNGTNTGLHLMNLPDDKQSEHLS-LLGVSRGRFRYFEVTDTCFGPRDLRVWVL 313

Query: 301 QDRDCS-WGLKCRLNVETLVGINANTLCATAETAATGRRFLGIVGFQGRDSERIYLNTTE 338
            D D   W L+ R+        + + +    E       ++  +     + + +YL    
Sbjct: 314 SDYDAQRWCLEYRIK------FSGSWIDEVNEFIPKDNFYIFPLALHPHEFDIVYLGYGG 371

[Close]

BLAST of Cla005949 vs. NCBI nr
Match: gi|700203165|gb|KGN58298.1| (hypothetical protein Csa_3G609260 [Cucumis sativus])

HSP 1 Score: 561.2 bits (1445), Expect = 1.3e-156
Identity = 278/346 (80.35%), Postives = 304/346 (87.86%), Query Frame = 1


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTPLSLPLRHGFFFQSSQIPK 68
           +PDDITIEILQ+FSLRSLAIAN VSKLWQSFI TKSL LHTPLS P+ HGFFFQSS IPK
Sbjct: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65

Query: 69  YGVPIHFFPSSLTSLNKTHFPNLRLLASSNGLLLCGKPNQNPIINYSVFNPSSNQLIPIP 128
            G PIHFFPSS TSL KT+FPNLRLLASSNGLLLC KPNQNPII+YSVFNPS+ QLIPIP
Sbjct: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125

Query: 129 KPTNLIASVKIGFHSHDSVSFTILRFVNFGFNPMEIFASETGEWRRLSFGLVIDSLFLPF 188
           KP+NLI+SVKIGFHSHDSVSFTILRFVNFGF PMEIFASETGEWRRL F L +D++F PF
Sbjct: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185

Query: 189 EGPSAVVLNGVFYWLEFNAIIYAFDLLRNEFYEVRFPSEETEYRRNVLSRCLAVAGGRLM 248
           EGPSAVVLNGVFYWLEFN+ IYAFDLLRNEFY+V FPSEETEY RNVL RCLA+AGGRL+
Sbjct: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245

Query: 249 MASTDGEFVEIRVLQDRDCSWGLKCRLNVETLVGINANTLCATAETAATGRRFLGIVGFQ 308
           MASTDG+ VEIRVL++RDC WGLKCRL VE++VGIN N LC  AE+     R +GIVGFQ
Sbjct: 246 MASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAES----ERLVGIVGFQ 305

Query: 309 GRDSERIYLNTTEDVICCDVGSGKVEIVHTFDGALKCTDVSNFRFF 355
           GRDSERIY+NTTE VICC VGSGKVEIV+ FD  L+  DVS+F FF
Sbjct: 306 GRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFF 347

[Close]

BLAST of Cla005949 vs. NCBI nr
Match: gi|449468704|ref|XP_004152061.1| (PREDICTED: F-box protein At5g18160 [Cucumis sativus])

HSP 1 Score: 561.2 bits (1445), Expect = 1.3e-156
Identity = 278/346 (80.35%), Postives = 304/346 (87.86%), Query Frame = 1


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTPLSLPLRHGFFFQSSQIPK 68
           +PDDITIEILQ+FSLRSLAIAN VSKLWQSFI TKSL LHTPLS P+ HGFFFQSS IPK
Sbjct: 17  IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 76

Query: 69  YGVPIHFFPSSLTSLNKTHFPNLRLLASSNGLLLCGKPNQNPIINYSVFNPSSNQLIPIP 128
            G PIHFFPSS TSL KT+FPNLRLLASSNGLLLC KPNQNPII+YSVFNPS+ QLIPIP
Sbjct: 77  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 136

Query: 129 KPTNLIASVKIGFHSHDSVSFTILRFVNFGFNPMEIFASETGEWRRLSFGLVIDSLFLPF 188
           KP+NLI+SVKIGFHSHDSVSFTILRFVNFGF PMEIFASETGEWRRL F L +D++F PF
Sbjct: 137 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 196

Query: 189 EGPSAVVLNGVFYWLEFNAIIYAFDLLRNEFYEVRFPSEETEYRRNVLSRCLAVAGGRLM 248
           EGPSAVVLNGVFYWLEFN+ IYAFDLLRNEFY+V FPSEETEY RNVL RCLA+AGGRL+
Sbjct: 197 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 256

Query: 249 MASTDGEFVEIRVLQDRDCSWGLKCRLNVETLVGINANTLCATAETAATGRRFLGIVGFQ 308
           MASTDG+ VEIRVL++RDC WGLKCRL VE++VGIN N LC  AE+     R +GIVGFQ
Sbjct: 257 MASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAES----ERLVGIVGFQ 316

Query: 309 GRDSERIYLNTTEDVICCDVGSGKVEIVHTFDGALKCTDVSNFRFF 355
           GRDSERIY+NTTE VICC VGSGKVEIV+ FD  L+  DVS+F FF
Sbjct: 317 GRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFF 358

[Close]

BLAST of Cla005949 vs. NCBI nr
Match: gi|565355965|ref|XP_006344845.1| (PREDICTED: F-box protein At5g03970-like [Solanum tuberosum])

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-17
Identity = 98/369 (26.56%), Postives = 155/369 (42.01%), Query Frame = 1


Query: 11  DDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTP----LSLPLRHGFFFQSSQI 70
           DDI I IL     +SLA   CVSK W+ +I+  SL            P   GFF+Q+   
Sbjct: 18  DDIVINILHRLPSKSLARFKCVSKCWRKYIADSSLSYSCRSRRWRPQPYLIGFFYQARDT 77

Query: 71  PKYGVPIHFFPSSLTSLN-KTHFP--------NLRLLASSNGLLLCGKPNQNPIINYSVF 130
            +      FF S  +SL+  + F         +  ++ASSNG LLC +        Y V+
Sbjct: 78  CERSKIQFFFSSEESSLDIDSSFDQSVSFLGRSAYIVASSNGFLLCNRQRV-----YYVY 137

Query: 131 NPSSNQLIPIPKPTNLIASVKIGF------HSHDSVSFTILRFVNFGFN-PMEIFASETG 190
           NP++ Q + +PK    +    IGF       + D +SFTI+R+     N  +E F+SET 
Sbjct: 138 NPATRQRMALPKTQIGMNDPTIGFICKVDDPNRDVISFTIVRYWIVQSNVTIESFSSETN 197

Query: 191 EWRRLSFGLVIDSL----------FLPFEGPSAVVLNGVFYWLEFNAIIYAFDLLRNEFY 250
            W       ++D+L          F+  + PSA V++GVF+WL+    I  +D +   F+
Sbjct: 198 AW-------IVDNLILNVPLRLYFFVYMKSPSAGVVDGVFFWLDQGPQITVYDSVHKSFW 257

Query: 251 EVRFPSEETEYRRNVLSRCLAVAGGRLMMASTDGEFVEIRVLQDRDCSWGLKCRLNVETL 310
            + FP +              VA G   +  + G+F     ++     W LK  +     
Sbjct: 258 ALGFPED-------------MVATGNYFLGFSGGDFYFALYIKTNITVWQLKSNIRSRDA 317

Query: 311 VGINANTLCATAETAATGRRFLGIVGFQGRDSERI----------YLNTTEDVICCDVGS 340
           + +         + A T     G+ GF   + + +          YL+    VI  D+ +
Sbjct: 318 LWVRK----YVTDVATTVP--FGLTGFLHTEVQNMDIHPAIPHIFYLDVKGKVISYDMET 355

[Close]

BLAST of Cla005949 vs. NCBI nr
Match: gi|971560980|ref|XP_015166835.1| (PREDICTED: F-box protein At5g03970-like [Solanum tuberosum])

HSP 1 Score: 95.5 bits (236), Expect = 2.0e-16
Identity = 88/312 (28.21%), Postives = 137/312 (43.91%), Query Frame = 1


Query: 11  DDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTPLSLPLRHGFFFQSSQIPKYG 70
           +DI I+IL     + LA   CVSK W+ +I+         +  P   GFF Q S+I +  
Sbjct: 17  EDIMIKILDFLPSKCLAKFKCVSKCWEKYIA--DCRCRRWIQKPYLVGFFCQHSEIQR-- 76

Query: 71  VPIHFFPSSLT----------SLNKTHFPN-LRLLASSNGLLLCGKPNQNPIINYSVFNP 130
             + FF SS +          SL+   F    RL+A+SNG LLC        ++Y V+NP
Sbjct: 77  -ELRFFLSSSSTKDHSGTFVGSLDHNLFHRKARLVAASNGFLLCNVKK----VHYYVYNP 136

Query: 131 SSNQLIPIPK-------------PTNLIASVKIGFHSHDSVSFTILRFVNFGFNP----- 190
           +++Q + +PK             P   I  V    +  D +SFTI+R+     NP     
Sbjct: 137 ATSQFLVLPKTQICMEDDDNNPPPVGFICKVDNPDNKDDIISFTIVRYA-IPLNPSNLQF 196

Query: 191 ---MEIFASETGEWRRLSFGLVIDSLFLP---FEGPSAVVLNGVFYWLEFNAIIYAFDLL 250
              +E F+SET  W      L +     P    + PSA V++GVFYW + +  I  +D +
Sbjct: 197 AVTIESFSSETNVWTANKITLEVPIRLFPCTFMKSPSASVIDGVFYWYDDSLQITVYDSI 256

Query: 251 RNEFYEVRFPSEETEYRRNVLSRCLAVAGGRLMMA------STDGEFVEIRVLQDRDCSW 282
              F++++ P    +  R +    L  + G L  A       T   +     +++RD  W
Sbjct: 257 HKSFWDLKLPE---DMERGIGCGYLGSSAGGLYFALNIIFKGTVIVWYLASNIRNRDAVW 315

[Close]

BLAST of Cla005949 vs. NCBI nr
Match: gi|697161768|ref|XP_009589675.1| (PREDICTED: F-box protein At5g03970-like [Nicotiana tomentosiformis])

HSP 1 Score: 93.6 bits (231), Expect = 7.6e-16
Identity = 85/281 (30.25%), Postives = 133/281 (47.33%), Query Frame = 1


Query: 9   LPDDITIEILQHFSLRSLAIANCVSKLWQSFISTKSLLLHTP----LSLPLRHGFFFQSS 68
           L +DI +EIL     +SLA   CVS+ W+ +IS  SL            P   G F+Q+ 
Sbjct: 14  LSEDIKMEILHRLPSKSLARFKCVSRSWRKYISDSSLSYSCRSRRWRPQPELIGIFYQTR 73

Query: 69  QIPKYGVPIHFFPSSLTSLN---KTHFPNLR--LLASSNGLLLCGKPNQNPIINYSVFNP 128
           ++ K G       SSL +++     +F N +  ++ASSNG LLC K  ++P + Y V+NP
Sbjct: 74  KLSKIGFFSESKESSLKNIDLDESVNFLNRKVYIVASSNGFLLCTKHRRSPRV-YYVYNP 133

Query: 129 SSNQLIPIPKP-------TNLIASVKIGFHSHDSVSFTIL------RFVNFGFN-PMEIF 188
           ++ Q + +PK        T +  S K+     D +SFTI+      RF    F+  +E F
Sbjct: 134 ATRQHLALPKTQICMENGTAVGFSCKVDDSDKDVISFTIVRYEIPRRFDKLQFSVTIECF 193

Query: 189 ASETGEWRRLSFGLVIDSLFLPF-------EGPSAVVLNGVFYWLEFNAIIYAFDLLRNE 248
           +SET  W   +  L +     PF          +A V++GVF WL+    I  +D +   
Sbjct: 194 SSETNVWTANNLTLDVPLRLNPFNWDGIFRSAAAAGVIDGVFCWLDQGGQITFYDSVYKC 253

Query: 249 FYEVRFPSEETEYRRNVLSRCLAVAGGRLMMASTDGEFVEI 260
           F+ +  P EE  +     S  L ++GG L  A   G+ + +
Sbjct: 254 FWTLELP-EEMVFGE---SCYLGLSGGALYFALNCGDAITV 289

The following BLAST results are available for this feature:

BLAST of Cla005949 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB36_ARATH	3.4e-08	28.57	Putative F-box protein At1g46984 OS=Arabidopsis thaliana GN=At1g46984 PE=3 SV=1	[more]
FB260_ARATH	2.9e-07	25.64	F-box protein At5g18160 OS=Arabidopsis thaliana GN=At5g18160 PE=2 SV=1	[more]
FB300_ARATH	3.8e-07	25.34	F-box protein At5g65850 OS=Arabidopsis thaliana GN=At5g65850 PE=2 SV=1	[more]
FB145_ARATH	2.4e-06	22.44	Putative F-box protein At3g16210 OS=Arabidopsis thaliana GN=At3g16210 PE=3 SV=1	[more]
FB30_ARATH	2.4e-06	25.35	Putative F-box protein At1g32420 OS=Arabidopsis thaliana GN=At1g32420 PE=3 SV=1	[more]

BLAST of Cla005949 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8X4_CUCSA	8.9e-157	80.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G609260 PE=4 SV=1	[more]
M1CB75_SOLTU	9.6e-18	26.56	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024780 PE=4 SV=1	[more]
M1DFM1_SOLTU	1.4e-16	28.21	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400037851 PE=4 SV=1	[more]
A0A166J9D5_DAUCA	1.6e-12	26.61	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004585 PE=4 SV=1	[more]
A0A166J9D5_DAUCA	1.9e-10	23.83	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_004585 PE=4 SV=1	[more]

BLAST of Cla005949 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700203165\|gb\|KGN58298.1\|	1.3e-156	80.35	hypothetical protein Csa_3G609260 [Cucumis sativus]	[more]
gi\|449468704\|ref\|XP_004152061.1\|	1.3e-156	80.35	PREDICTED: F-box protein At5g18160 [Cucumis sativus]	[more]
gi\|565355965\|ref\|XP_006344845.1\|	1.4e-17	26.56	PREDICTED: F-box protein At5g03970-like [Solanum tuberosum]	[more]
gi\|971560980\|ref\|XP_015166835.1\|	2.0e-16	28.21	PREDICTED: F-box protein At5g03970-like [Solanum tuberosum]	[more]
gi\|697161768\|ref\|XP_009589675.1\|	7.6e-16	30.25	PREDICTED: F-box protein At5g03970-like [Nicotiana tomentosiformis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR017451	F-box-assoc_interact_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla005949	Cla005949.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 9..49 score: 0
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 9..75 score: 1.4
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	TIGR01640	coord: 98..275 score: 1.2
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 7..45 score: 1.
None	No IPR available	PANTHER	PTHR32133	FAMILY NOT NAMED	coord: 7..357 score: 1.2
None	No IPR available	unknown	SSF117281	Kelch motif	coord: 100..270 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla005949	Cla97C07G129630	Watermelon (97103) v2	wmwmbB175
Cla005949	Csa3G609260	Cucumber (Chinese Long) v2	cuwmB228
Cla005949	ClCG07G001350	Watermelon (Charleston Gray)	wcgwmB373
Cla005949	CSPI03G26800	Wild cucumber (PI 183967)	cpiwmB226
Cla005949	CmaCh02G017220	Cucurbita maxima (Rimu)	cmawmB558
Cla005949	CmoCh02G017650	Cucurbita moschata (Rifu)	cmowmB551
Cla005949	Lsi05G010480	Bottle gourd (USVL1VR-Ls)	lsiwmB356
Cla005949	Cp4.1LG05g00900	Cucurbita pepo (Zucchini)	cpewmB700
Cla005949	CsGy3G025000	Cucumber (Gy14) v2	cgybwmB213
Cla005949	Carg08943	Silver-seed gourd	carwmB0778
Cla005949	CsaV3_3G028310	Cucumber (Chinese Long) v3	cucwmB235

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla005949	Silver-seed gourd	carwmB0216
Cla005949	Silver-seed gourd	carwmB0222
Cla005949	Silver-seed gourd	carwmB0750
Cla005949	Silver-seed gourd	carwmB0960
Cla005949	Silver-seed gourd	carwmB1073
Cla005949	Cucumber (Chinese Long) v3	cucwmB130
Cla005949	Cucumber (Chinese Long) v3	cucwmB227
Cla005949	Watermelon (97103) v2	wmwmbB161
Cla005949	Watermelon (97103) v2	wmwmbB165
Cla005949	Wax gourd	wgowmB060
Cla005949	Wax gourd	wgowmB186
Cla005949	Wax gourd	wgowmB265
Cla005949	Watermelon (97103) v1	wmwmB099
Cla005949	Watermelon (97103) v1	wmwmB116
Cla005949	Cucumber (Gy14) v1	cgywmB475
Cla005949	Cucumber (Gy14) v1	cgywmB689
Cla005949	Cucurbita maxima (Rimu)	cmawmB236
Cla005949	Cucurbita maxima (Rimu)	cmawmB340
Cla005949	Cucurbita maxima (Rimu)	cmawmB491
Cla005949	Cucurbita maxima (Rimu)	cmawmB796
Cla005949	Cucurbita maxima (Rimu)	cmawmB866
Cla005949	Cucurbita moschata (Rifu)	cmowmB223
Cla005949	Cucurbita moschata (Rifu)	cmowmB337
Cla005949	Cucurbita moschata (Rifu)	cmowmB485
Cla005949	Cucurbita moschata (Rifu)	cmowmB790
Cla005949	Cucurbita moschata (Rifu)	cmowmB853
Cla005949	Melon (DHL92) v3.5.1	mewmB357
Cla005949	Melon (DHL92) v3.5.1	mewmB410
Cla005949	Melon (DHL92) v3.5.1	mewmB459
Cla005949	Watermelon (Charleston Gray)	wcgwmB280
Cla005949	Watermelon (Charleston Gray)	wcgwmB324
Cla005949	Cucumber (Chinese Long) v2	cuwmB116
Cla005949	Cucumber (Chinese Long) v2	cuwmB221
Cla005949	Cucurbita pepo (Zucchini)	cpewmB147
Cla005949	Cucurbita pepo (Zucchini)	cpewmB257
Cla005949	Cucurbita pepo (Zucchini)	cpewmB326
Cla005949	Cucurbita pepo (Zucchini)	cpewmB605
Cla005949	Cucurbita pepo (Zucchini)	cpewmB841
Cla005949	Bottle gourd (USVL1VR-Ls)	lsiwmB013
Cla005949	Bottle gourd (USVL1VR-Ls)	lsiwmB359
Cla005949	Cucumber (Gy14) v2	cgybwmB114
Cla005949	Cucumber (Gy14) v2	cgybwmB207
Cla005949	Melon (DHL92) v3.6.1	medwmB355
Cla005949	Melon (DHL92) v3.6.1	medwmB401
Cla005949	Melon (DHL92) v3.6.1	medwmB444