Carg08943 (gene) Silver-seed gourd

NameCarg08943
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionF-box protein
LocationCucurbita_argyrosperma_scaffold_020 : 900232 .. 906286 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTAGCAACGGCCTTCTTCTCTGCGGCAAATCCAATCAAAACCCTATTGTCAACTACTCTGTCTGGAATCCCACCTCCAATCGCCTGATTCCAATCCCAAAACCGAGGAATCTCTTCACCGGCGTTAAGATCGGATTCCATTCCCATGATTCTGTTTCGTTCACCATTCTTCGATTTGGGAATTTAGGGCTCGAACCGATGGAGATTTTCTCGTCTGAAACAGGGGAATGGCGGCACTTGGCCTTCAATTTGGCGATGGATTCATTGTTTTTGCCCTTCGAAGGGCCGTCGGCGGTGGTTCTAAACGGGGTGTTTTACTGGCTGGAGTTTCGATCGATGATTTACGCTTTCGATTTGCTCAAAAACGAATTTCTGAAAGTGGGATTTCCATTTGAGGAACCGGAGTATCGCCGGGAAGTATTCTCCCGTTGCCTCGCCGTCGCGGGTGGGGAGGTGGTGATGGCGTCGACCAACGGCGAGGTTATTGAGATTTGGATTCTTCAGGATAAGGCATCGTCTTTGTGGGGTTTGAAGAGTAGATTAAACGTTGAAAGTCTCGTTGGCATTATCGCAAACACCTTGTGCGCAAGGGCGGCGACGGCAGCGGTTGGGCGGAGAATTGTTGGGATTGTGGGGTTTCAAGCATGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGTAGTGGTTTGTTGTGATATTGGAAGTGGGAAAGTTGAGATTGTTCACCGATTTGATGAGAGCTTGGGATGTACGGATGTTTCTGACTTCATGTTCTTACCTTATGAGTGTGTTCAGCTTGGTTGATTGCGGTAATGTTCGTAATGAGTAGAGCCCAGATATTTAAACCCTAACAACTCGGTTAGGATGTGTCCACCCGTTAAGCTTTATTCAATAACACTCATGGTCACTCATGTACATTTGAGTCTTCACATTTTGCTTCAATGTTTCATTTGGTTGACTATAATCATTATTGCTTTCTTTCCTTCGAGCTGATTTCTTGGAAAATAAAAAATTTGGATGAATTCGAGGGTTACAATTTTTTGTTGGGTCAATCCGACCAACTCTTGAAAAATAGGGTTACAACCTTACTTTTAATATTATTTCGAAAATTAAGAATATTGACGTTTATAACCAATGTTAGTATCAATTATGAATGGTTAATGTTTGATATTTGGTTACTAACCTAACCTGTAGTGTCGATAGGTAGGATTTTTTCAATAATTTAAAAAATAAAGTTTGTTTTAGTTTTTCCTATTAATCAATGAAACGATGTCGTATAAAGTCACGTGAAACGGGCTTAGCAAAACACGGAAAGGACAGTAAAGAACTGCGTTTAGACACATTGACTAAAACCCTAACCCCAGCCAACGTAGACTCTGCGCCGTCGTCTTTCATATATTAAGAACCGCATTTGTTAACATTTGCTTTTTTGATCGGAGGATAGAGAAGGCAGCTAGAGAGCCCGTCGACAATGTCGAAGCGAGGTATGGTTTGATCGTTCTATCTCCATTTTGTTCCCGACGTTCTCTTTATATGTAACTGTAAACGCACTAGTTGATTCGATCTTTGTTTTGCTACTGTTTTCATACTCTTAGATTTGAGATTTTTTATTGTTGTGTATCTATTTAGGTAGGGGAGGTTCCGCCGGGAATAAATTTAGGATGTCGCTAGGTCTTCCTGTTGCGGCTACAGTGAACTGTGCCGATAACACAGGAGCTAAGAACCTCTATATCATTTCGGTGAAGGGGATCAAGGGCCGCCTCAACCGTCTGCCATCTGCTTGTGTTGGTGACATGGTCATGGCGACGGTCAAGAAGGGAAAACCTGACCTCAGGAAGAAGGTGCTGCCTGCTGTTATTGTCAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTCTTTATGTACTTCGAAGGTAATTCACTACTTAAATTATCTGTCGTATTTCGCTTCCGATCATTTTTATACCATGTTATCTTGCGTTTAGGTTAGTTTGTGTAGGCATATAGTTATCGTTCTAGTTAACAGTGATCGGTTGGATTGTTGATATTGGATGTAGTATCGGCGGTTATTCTTTGTTGATTGAATCCATCTTAAAATTTGTGGATGATTTCTGTTCTTTATGTGTTGTGGATGAAATTTGGGTTAAGAAAATCCTATTACTCTGTTAGTTTAGTTTCACACAAACATGGTCTGTGTAGATTGTTATTGGGAGTAATTTTGGTGCTTTCTATTTTAATTCGATGGCAATGGTGTTAGATAAAACCTTTTGTTTTTTCTTTATTTAGATTCACACGTTTACATTTATTTCCCTTTGACCATTTTGACAACACGTCGAATGGATTAGCTAATTCTTAGACGTCAATTTTCTAGGAAGTGGCACAGATTCAGTTGGCCACTCTCCACCCATTTTTAGGATAGGTTGTATTTGAATAGGAAAATCTGTTTACAAGATTTCACTACCGGATTTTTGAAGAGCAGTCAAAGTTTCAGTCCTTCTCTCTCTCTTATTTTTACGCATTTATCTTTCCTCCAACAACCTCTGTCGACAATATCCTCTCGGTGATTTCCCTGGCCAATTATCGAAATTTCAACAAGTGGTATCAGAGCCTCGTTGAAGCAATCGGTAGTATATACCATACAAGAAGAGCCATACCTATCAACAATCAAGTTGAATAGCTCAGTGGTTAGAGCGTCGACCTAACAACACACAGGTCTCAGGTTCGAGTAGAAGAAAATGCAAAGTGCAAAAATAAATACATCGTCGTGGGGTCCATCTCGAGCAGGCTCGCTCACTCCTCCACGTCGCCAAGTGCTGGCATCTCCATCACCACCCACGAAGAGGTCGTGGCCGACGCCGTGATGACGGGCGTCGAGGTGTCGTTGAGCGAGTGATCAGGGAGACAACGACTGTCGTCGTTCAGTACCCGATGTTGACAAGGTTCAACTACAACGAGTGGGCCTTGTTGATATGCGCGTCAACCTACAGGCGCATGGGTTATGGCACGCTGTCGAGCCAGAGGAAGGAGAAACAATCGAGTACCGGGAGGATCGGCTGGCGTTCGCCGCCATATTACGATCTGTGCCCCCAGAGATGTTGGCATCTCTCTCCACCAAGCGCACCGCGCAATCGGCCTGGGAAGGAATTAAAATCCCGTCGATCGGTGTACAGCGAGTGCGGGAATCCAACATTGAGCAGCTGCGGAAGGAGCTCTCGGGGATCTCCTTTAAGGACGGCGAATCCATCGATGATTTTTCAATGCGAATCACGGGGCTCGCCAACAGCATCAACGAGACAGAAATCGTGAAGAAGATGCTGCAGGTCATCCCCGATCACCTCGAGCAAGTTGCAATTTCAATCGAGACATTGCTTGACGTGAATGACCTAACGGTGGAAGAGGTGACCGGAAGACTGCGTAACGTCGGCAGCGGAAGAAAAATACCATTTCAGCTGTCGACAAGGAGGGTCCGTCTACTCCTCACTGAGGAGGAATGCTTGCCACGCCTAAAGCTCCGTGATGACCACCGGCGAGAGCAATGGGCCCTCCAGCCGCAAAGGCGGTAAGAAGCCGTGGAAATCTCGATGGCGCATGCACAGGAAAAGAGGCGGATCAAAAGAAGGAGGGTCGACTGATGACGGGCCATCCATCCAGTGCTCGTACTGTGGGAAGAGAGGTCACCTGAGGCAAGAATTGCTGGAGCAAGCTCAGGAACAAGGAGACGGCCGAAAAGGCCCATGTGGCTCAATCCGAGGAGGATGAGCCGGCCTTTTTCATGTGGACTGCATCAGTCCTACCTGACCTCGAACCCGAGGAAGAGCTCCCCAAATCCACAGAGGTAATCGACGACGGCATAACTGCTCCGGGTGAGCGTCGAACCCGAGGAAGAGCTCCCCAAATCCACAGAGGTAATCGACGACGGCATAACTGCTCCGGTGAACGTCGAACCCGAGGAAGAACTCCAACTGTGCATAACAAATGCACCTGGGGAGCCAATTCGACTAAAGGAGGAGCGAGTGCTCGCTCAAATCGGTGAAAGAGGCAAGCAGCAAGAGCACCGGCGATGGGTCCTCGACACGGGGGCATCAAACCATATGACCGGGCCAAGTCTGCGTTCTCTGAGCTTGACTCGGGGATTCGCGGGACGGTGAAATTCGGCGATGGCTCCGTCGTCGAGATCGAAGGGCACGGTACCATCCTATTCGTCGGCAAGGGAGGCAATCATCACAAGCTGACCGGCGTCTACTTCATCCCGAGACTCAAGGCTAATATTGTGAGCCTGGGTCAACTCGATAAGGCCGGCTGCCACATTTCCATCAAAACGCGGGCTACTTAGGATCCGCGATGATCGACGACGGTTGCTCACGCAAGTTCGGTGCACGACAAATTGCCTTTACATCCTAAAGCTAGAGATAGAGACAACCAGTCAACTTCTCGGCCAGGTACCGGAAGATGAAGAAGACCTATTAGGAAGAGGTGAACCACCTGGACTGGGGGCGCGCCAACTCGAAGAAGAGGCGGCCGAACAAGACGTGGAGTCTGGAGGACATGCCGCCAGGGACACCGAGCCATAGGGCTCAAAACGGAGTTCAAAAACGAAACGAAATAAGGCAAGGCAGATATAACACAGGTTTTAGGAGGAGATTGTTAGATAAAACCTTTGTTTTTTCTTTTATTAGATTCACACGTTTACATTTAATTTTCCCTTTGACCATTTGACAAACACGTCGAATGGATTAGCTAATTCTTAGACGTCAATTTTCTAGGAAGTGGCACAGATTCAGTTGGCCACCCTCCACCCATTTTTAGGATAGGTTGTATTTAAATAGGAAATCTGTTTACAAGATTTCACTACCGGATTTTGAAGAGCAGTCAAAGTTTCAGTCCTTCTCTCTCTCTCTTATTTTACGCATTTTATCTTTCCTCCAACAACCTCCTGTCGACAATATCCTCTCGGTGATTTCCCTGGCCAATTATCGAAATTCAACAAATGGTTATTCAGAGAAGCGAATATCTCCATTTTTCACTTTGGATTAAATGGCTTACTATGTGATCTAGTAGTAGCGTTTTTATTATAAGAATGGCTATCGGGTTATGTGTTTAGTATCATATTGTTGTCAATTTTTTAGGACTGTTTCATGTCTTCACCCATATAAAATCGAATTATATAGTTGTTGAATAAGATTCTTTTTCCTTGTGCAGATAATGCTGGTGTCATCGTGAATCCCAAAGGAGAGATGAAAGGTATGATCTTCTCCTTCTTTAATGTATATAGTTCATATGTGATCTAGAAAATGATATGTAACATGTTAATCTTCTGTATTCATTTACAATAGAAGAAGAGAAATCATCACGCCCTCAATATTTCACTTTTGTTGATGTGTTATTTCTCTGGAATAATGCACCCGAACAGCTAGAAATGTAGTTTTATAGTACTGATAATTTTGATTCTCTATGCTTTGGAGGTGTTCTAGCCTTCATACTTCGTTTATTTTGCTTCCATGGATTTGAATGGTTATTTTCTTGGGTCTCGCAGGTTCTGCTATAACAGGCCCAATTGGAAAGGAATGTGCGGATCTCTGGCCGAGAATTGCAAGTGCTGCCAATGCTATTGTTTGACCATCAAATCAAGTGAATTGTCGTTTTTATCCTTCTAGGCTAGGATTATATGATTAAATTTCATTGTTGGGATTAACTTACTTTATCTTGACAAGAAATTATCGTTATGAGTTTTGGTTGATACTCAATGTGTTTTATCTCTATAGATGAAGTTAATTTGTGCCCATGATTTGATTTCTGGTACCCATTCAAAATTCTCCCTATCAGATTGTCTGCAGGGTAGGGAAGGAAATGATCGGGAGGAAACCTTGTCATTTCTAGGCATTGCAGTGAGGGTCGTGGTTGTGGATATCGGTCCTCTCGGGAATTAACGAGGTATCGGAATTCTGAACATAAAATTTTCCCTCACATAAGTCTATAAGAATCAGGAACAGGAAAAACTAGAGAAGTTTCCATTTCCATGTTTGTTTAATGCCATATATGCCTCTCTGATTG

mRNA sequence

TCTAGCAACGGCCTTCTTCTCTGCGGCAAATCCAATCAAAACCCTATTGTCAACTACTCTGTCTGGAATCCCACCTCCAATCGCCTGATTCCAATCCCAAAACCGAGGAATCTCTTCACCGGCGTTAAGATCGGATTCCATTCCCATGATTCTGTTTCGTTCACCATTCTTCGATTTGGGAATTTAGGGCTCGAACCGATGGAGATTTTCTCGTCTGAAACAGGGGAATGGCGGCACTTGGCCTTCAATTTGGCGATGGATTCATTGTTTTTGCCCTTCGAAGGGCCGTCGGCGGTGGTTCTAAACGGGGTGTTTTACTGGCTGGAGTTTCGATCGATGATTTACGCTTTCGATTTGCTCAAAAACGAATTTCTGAAAGTGGGATTTCCATTTGAGGAACCGGAGTATCGCCGGGAAGTATTCTCCCGTTGCCTCGCCGTCGCGGGTGGGGAGGTGGTGATGGCGTCGACCAACGGCGAGGTTATTGAGATTTGGATTCTTCAGGATAAGGCATCGTCTTTGTGGGGTTTGAAGAGTAGATTAAACGTTGAAAGTCTCGTTGGCATTATCGCAAACACCTTGTGCGCAAGGGCGGCGACGGCAGCGGTTGGGCGGAGAATTGTTGGGATTGTGGGGTTTCAAGCATGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGTAGTGGTTTGTTGTGATATTGGAAGTGGGAAAGTTGAGATTGTTCACCGATTTGATGAGAGCTTGGGATAGAAGGCAGCTAGAGAGCCCGTCGACAATGTCGAAGCGAGGTATGGTAGGGGAGGTTCCGCCGGGAATAAATTTAGGATGTCGCTAGGTCTTCCTGTTGCGGCTACAGTGAACTGTGCCGATAACACAGGAGCTAAGAACCTCTATATCATTTCGGTGAAGGGGATCAAGGGCCGCCTCAACCGTCTGCCATCTGCTTGTGTTGGTGACATGGTCATGGCGACGGTCAAGAAGGGAAAACCTGACCTCAGGAAGAAGGTGCTGCCTGCTGTTATTGTCAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTCTTTATGTACTTCGAAGATAATGCTGGTGTCATCGTGAATCCCAAAGGAGAGATGAAAGGTTCTGCTATAACAGGCCCAATTGGAAAGGAATGTGCGGATCTCTGGCCGAGAATTGCAAGTGCTGCCAATGCTATTGTTTGACCATCAAATCAAGTGAATTGTCGTTTTTATCCTTCTAGGCTAGGATTATATGATTAAATTTCATTGTTGGGATTAACTTACTTTATCTTGACAAGAAATTATCGTTATGAGTTTTGGTTGATACTCAATGTGTTTTATCTCTATAGATGAAGTTAATTTGTGCCCATGATTTGATTTCTGGTACCCATTCAAAATTCTCCCTATCAGATTGTCTGCAGGGTAGGGAAGGAAATGATCGGGAGGAAACCTTGTCATTTCTAGGCATTGCAGTGAGGGTCGTGGTTGTGGATATCGGTCCTCTCGGGAATTAACGAGGTATCGGAATTCTGAACATAAAATTTTCCCTCACATAAGTCTATAAGAATCAGGAACAGGAAAAACTAGAGAAGTTTCCATTTCCATGTTTGTTTAATGCCATATATGCCTCTCTGATTG

Coding sequence (CDS)

TCTAGCAACGGCCTTCTTCTCTGCGGCAAATCCAATCAAAACCCTATTGTCAACTACTCTGTCTGGAATCCCACCTCCAATCGCCTGATTCCAATCCCAAAACCGAGGAATCTCTTCACCGGCGTTAAGATCGGATTCCATTCCCATGATTCTGTTTCGTTCACCATTCTTCGATTTGGGAATTTAGGGCTCGAACCGATGGAGATTTTCTCGTCTGAAACAGGGGAATGGCGGCACTTGGCCTTCAATTTGGCGATGGATTCATTGTTTTTGCCCTTCGAAGGGCCGTCGGCGGTGGTTCTAAACGGGGTGTTTTACTGGCTGGAGTTTCGATCGATGATTTACGCTTTCGATTTGCTCAAAAACGAATTTCTGAAAGTGGGATTTCCATTTGAGGAACCGGAGTATCGCCGGGAAGTATTCTCCCGTTGCCTCGCCGTCGCGGGTGGGGAGGTGGTGATGGCGTCGACCAACGGCGAGGTTATTGAGATTTGGATTCTTCAGGATAAGGCATCGTCTTTGTGGGGTTTGAAGAGTAGATTAAACGTTGAAAGTCTCGTTGGCATTATCGCAAACACCTTGTGCGCAAGGGCGGCGACGGCAGCGGTTGGGCGGAGAATTGTTGGGATTGTGGGGTTTCAAGCATGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGTAGTGGTTTGTTGTGATATTGGAAGTGGGAAAGTTGAGATTGTTCACCGATTTGATGAGAGCTTGGGATAG

Protein sequence

SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLG
BLAST of Carg08943 vs. NCBI nr
Match: XP_022931048.1 (F-box protein At1g52495-like [Cucurbita moschata])

HSP 1 Score: 511.9 bits (1317), Expect = 1.2e-141
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFG 60
           SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFG
Sbjct: 142 SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFG 201

Query: 61  NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLL 120
           NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLL
Sbjct: 202 NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLL 261

Query: 121 KNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSR 180
           KNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSR
Sbjct: 262 KNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSR 321

Query: 181 LNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVE 240
           LNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVE
Sbjct: 322 LNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVE 381

Query: 241 IVHRFDESLG 251
           IVHRFDESLG
Sbjct: 382 IVHRFDESLG 391

BLAST of Carg08943 vs. NCBI nr
Match: XP_022996333.1 (F-box protein At1g52495-like [Cucurbita maxima])

HSP 1 Score: 506.1 bits (1302), Expect = 6.6e-140
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFG 60
           SSNGLLLCGKSNQNPIVNYSVWNP SNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFG
Sbjct: 142 SSNGLLLCGKSNQNPIVNYSVWNPASNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFG 201

Query: 61  NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLL 120
           NLGLEPMEIFSSETGEWRHLAFNLA+DSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLL
Sbjct: 202 NLGLEPMEIFSSETGEWRHLAFNLAIDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLL 261

Query: 121 KNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSR 180
           KNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSR
Sbjct: 262 KNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSR 321

Query: 181 LNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVE 240
           LNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGS KVE
Sbjct: 322 LNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSAKVE 381

Query: 241 IVHRFDESLG 251
           IVHRFDESLG
Sbjct: 382 IVHRFDESLG 391

BLAST of Carg08943 vs. NCBI nr
Match: XP_004152061.1 (PREDICTED: F-box protein At5g18160 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 3.8e-95
Identity = 174/249 (69.88%), Postives = 202/249 (81.12%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFG 60
           SSNGLLLC K NQNPI++YSV+NP++ +LIPIPKP NL + VKIGFHSHDSVSFTILRF 
Sbjct: 104 SSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIPKPSNLISSVKIGFHSHDSVSFTILRFV 163

Query: 61  NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLL 120
           N G +PMEIF+SETGEWR L F L MD++F PFEGPSAVVLNGVFYWLEF S IYAFDLL
Sbjct: 164 NFGFKPMEIFASETGEWRRLDFYLDMDTMFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLL 223

Query: 121 KNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSR 180
           +NEF +VGFP EE EY R V  RCLA+AGG +VMAST+G+V+EI +L+++   LWGLK R
Sbjct: 224 RNEFYQVGFPSEETEYERNVLLRCLAIAGGRLVMASTDGKVVEIRVLEER-DCLWGLKCR 283

Query: 181 LNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVE 240
           L VES+VGI  N LC     AA   R+VGIVGFQ  DSERIY+NTTE V+CC +GSGKVE
Sbjct: 284 LRVESVVGINGNRLC----EAAESERLVGIVGFQGRDSERIYMNTTEFVICCHVGSGKVE 343

Query: 241 IVHRFDESL 250
           IV+RFD  L
Sbjct: 344 IVYRFDTVL 347

BLAST of Carg08943 vs. NCBI nr
Match: KGN58298.1 (hypothetical protein Csa_3G609260 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 3.8e-95
Identity = 174/249 (69.88%), Postives = 202/249 (81.12%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFG 60
           SSNGLLLC K NQNPI++YSV+NP++ +LIPIPKP NL + VKIGFHSHDSVSFTILRF 
Sbjct: 93  SSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIPKPSNLISSVKIGFHSHDSVSFTILRFV 152

Query: 61  NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLL 120
           N G +PMEIF+SETGEWR L F L MD++F PFEGPSAVVLNGVFYWLEF S IYAFDLL
Sbjct: 153 NFGFKPMEIFASETGEWRRLDFYLDMDTMFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLL 212

Query: 121 KNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSR 180
           +NEF +VGFP EE EY R V  RCLA+AGG +VMAST+G+V+EI +L+++   LWGLK R
Sbjct: 213 RNEFYQVGFPSEETEYERNVLLRCLAIAGGRLVMASTDGKVVEIRVLEER-DCLWGLKCR 272

Query: 181 LNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVE 240
           L VES+VGI  N LC     AA   R+VGIVGFQ  DSERIY+NTTE V+CC +GSGKVE
Sbjct: 273 LRVESVVGINGNRLC----EAAESERLVGIVGFQGRDSERIYMNTTEFVICCHVGSGKVE 332

Query: 241 IVHRFDESL 250
           IV+RFD  L
Sbjct: 333 IVYRFDTVL 336

BLAST of Carg08943 vs. NCBI nr
Match: XP_016546044.1 (PREDICTED: F-box protein At5g49610-like [Capsicum annuum])

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16
Identity = 78/270 (28.89%), Postives = 122/270 (45.19%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGF---HSHDSVSFTIL 60
           SS+G LLC K      + Y V+NP + +   +PK R L    ++GF    +++SVSFTI+
Sbjct: 101 SSSGFLLCNKLKSRQRI-YYVYNPATRQRFDVPKTRILMNDPRVGFMVKETNESVSFTIV 160

Query: 61  RFG--------NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPF----EGPSAVVLNGVF 120
           R+G              +EIFSSET  W      +    LF P+       SA V++ VF
Sbjct: 161 RYGVHRAYFHDLYSSVTIEIFSSETNIWTANKLTVDERLLFYPYRDETSSSSACVVDRVF 220

Query: 121 YWL-EFRSMIYAFDLLKNEFLKVGFP----FEEPEYRREVFSRCLAVAGGEVVMASTNGE 180
            WL  +   +  +D +K  F  +G P    F  P Y       CL ++GGE+  AS  G 
Sbjct: 221 CWLCNYPQQVTVYDSVKKCFWALGLPDWTWFLYPGY------SCLGLSGGELCFASNGGT 280

Query: 181 VIEIWILQD--KASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDS 240
            I  W + +    + +W  K  ++V ++V             A  G ++  +V F     
Sbjct: 281 AISCWRINNFPSRNPVWVWKYDIDVATVVQKCREDFGLGGGNAP-GFKVRNMV-FHPALP 340

Query: 241 ERIYLNTTEVVVCCDIGSGKVEIVHRFDES 249
           + +YL     V+  D+ +   E+VH F E+
Sbjct: 341 DILYLQIRSKVISYDMKTSSAELVHDFGEA 361

BLAST of Carg08943 vs. TrEMBL
Match: tr|A0A0A0L8X4|A0A0A0L8X4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.5e-95
Identity = 174/249 (69.88%), Postives = 202/249 (81.12%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFG 60
           SSNGLLLC K NQNPI++YSV+NP++ +LIPIPKP NL + VKIGFHSHDSVSFTILRF 
Sbjct: 93  SSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIPKPSNLISSVKIGFHSHDSVSFTILRFV 152

Query: 61  NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLL 120
           N G +PMEIF+SETGEWR L F L MD++F PFEGPSAVVLNGVFYWLEF S IYAFDLL
Sbjct: 153 NFGFKPMEIFASETGEWRRLDFYLDMDTMFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLL 212

Query: 121 KNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSR 180
           +NEF +VGFP EE EY R V  RCLA+AGG +VMAST+G+V+EI +L+++   LWGLK R
Sbjct: 213 RNEFYQVGFPSEETEYERNVLLRCLAIAGGRLVMASTDGKVVEIRVLEER-DCLWGLKCR 272

Query: 181 LNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVE 240
           L VES+VGI  N LC     AA   R+VGIVGFQ  DSERIY+NTTE V+CC +GSGKVE
Sbjct: 273 LRVESVVGINGNRLC----EAAESERLVGIVGFQGRDSERIYMNTTEFVICCHVGSGKVE 332

Query: 241 IVHRFDESL 250
           IV+RFD  L
Sbjct: 333 IVYRFDTVL 336

BLAST of Carg08943 vs. TrEMBL
Match: tr|A0A1U8EQ88|A0A1U8EQ88_CAPAN (F-box protein At5g49610-like OS=Capsicum annuum OX=4072 GN=LOC107846084 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 8.0e-17
Identity = 78/270 (28.89%), Postives = 122/270 (45.19%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGF---HSHDSVSFTIL 60
           SS+G LLC K      + Y V+NP + +   +PK R L    ++GF    +++SVSFTI+
Sbjct: 101 SSSGFLLCNKLKSRQRI-YYVYNPATRQRFDVPKTRILMNDPRVGFMVKETNESVSFTIV 160

Query: 61  RFG--------NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPF----EGPSAVVLNGVF 120
           R+G              +EIFSSET  W      +    LF P+       SA V++ VF
Sbjct: 161 RYGVHRAYFHDLYSSVTIEIFSSETNIWTANKLTVDERLLFYPYRDETSSSSACVVDRVF 220

Query: 121 YWL-EFRSMIYAFDLLKNEFLKVGFP----FEEPEYRREVFSRCLAVAGGEVVMASTNGE 180
            WL  +   +  +D +K  F  +G P    F  P Y       CL ++GGE+  AS  G 
Sbjct: 221 CWLCNYPQQVTVYDSVKKCFWALGLPDWTWFLYPGY------SCLGLSGGELCFASNGGT 280

Query: 181 VIEIWILQD--KASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDS 240
            I  W + +    + +W  K  ++V ++V             A  G ++  +V F     
Sbjct: 281 AISCWRINNFPSRNPVWVWKYDIDVATVVQKCREDFGLGGGNAP-GFKVRNMV-FHPALP 340

Query: 241 ERIYLNTTEVVVCCDIGSGKVEIVHRFDES 249
           + +YL     V+  D+ +   E+VH F E+
Sbjct: 341 DILYLQIRSKVISYDMKTSSAELVHDFGEA 361

BLAST of Carg08943 vs. TrEMBL
Match: tr|A0A2G2YHE4|A0A2G2YHE4_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_28665 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 8.0e-17
Identity = 78/270 (28.89%), Postives = 122/270 (45.19%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGF---HSHDSVSFTIL 60
           SS+G LLC K      + Y V+NP + +   +PK R L    ++GF    +++SVSFTI+
Sbjct: 133 SSSGFLLCNKLKSRQRI-YYVYNPATRQRFDVPKTRILMNDPRVGFMVKETNESVSFTIV 192

Query: 61  RFG--------NLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPF----EGPSAVVLNGVF 120
           R+G              +EIFSSET  W      +    LF P+       SA V++ VF
Sbjct: 193 RYGVHRAYFHDLYSSVTIEIFSSETNIWTANKLTVDERLLFYPYRDETSSSSACVVDRVF 252

Query: 121 YWL-EFRSMIYAFDLLKNEFLKVGFP----FEEPEYRREVFSRCLAVAGGEVVMASTNGE 180
            WL  +   +  +D +K  F  +G P    F  P Y       CL ++GGE+  AS  G 
Sbjct: 253 CWLCNYPQQVTVYDSVKKCFWALGLPDWTWFLYPGY------SCLGLSGGELCFASNGGT 312

Query: 181 VIEIWILQD--KASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDS 240
            I  W + +    + +W  K  ++V ++V             A  G ++  +V F     
Sbjct: 313 AISCWRINNFPSRNPVWVWKYDIDVATVVQKCREDFGLGGGNAP-GFKVRNMV-FHPALP 372

Query: 241 ERIYLNTTEVVVCCDIGSGKVEIVHRFDES 249
           + +YL     V+  D+ +   E+VH F E+
Sbjct: 373 DILYLQIRSKVISYDMKTSSAELVHDFGEA 393

BLAST of Carg08943 vs. TrEMBL
Match: tr|A0A200QEP5|A0A200QEP5_9MAGN (F-box domain OS=Macleaya cordata OX=56857 GN=BVC80_901g50 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.4e-13
Identity = 67/219 (30.59%), Postives = 101/219 (46.12%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPK-PRNLFTGVKIGF--HSHDSVSFT-- 60
           SSNGL+LC  S Q     Y V NP +   + + + P+N    V  GF   S +S++FT  
Sbjct: 148 SSNGLVLCSTSLQYQ-TRYYVCNPLTKEWMSLRRQPKNCHKWVLHGFICESSNSLTFTNL 207

Query: 61  ---------------ILRFGNLGLEP-----MEIFSSETGEWRHLAFNLAMDSLFLPFEG 120
                          ++R   LG+ P     +EIFSSETGEW     +   +   L +  
Sbjct: 208 LKTKKKKFTSSTSYKVVRIPELGVSPTTNFDLEIFSSETGEWNTYKVSCPQEVSKLYYSI 267

Query: 121 PSAVVL-NGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEE----PEYRREVFSRCLAVAGG 180
            + VV+ NGV YWLE R+ I  +DL                  PE  +E F RCL ++ G
Sbjct: 268 TNHVVIQNGVLYWLERRNRILVYDLSXXXXXXXXXXXXRLINLPE-NKESFYRCLGMSEG 327

Query: 181 EVVMASTNGEVIEIWILQDKA--SSLWGLKSRLNVESLV 188
            +     N     +W+L+D +   S+W L  ++N+E ++
Sbjct: 328 FICYCQCNNGQFSVWVLEDCSIRGSVWCLIHKINLEDML 364

BLAST of Carg08943 vs. TrEMBL
Match: tr|M1CB75|M1CB75_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102578743 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 7.8e-12
Identity = 74/267 (27.72%), Postives = 116/267 (43.45%), Query Frame = 0

Query: 1   SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGF------HSHDSVSF 60
           SSNG LLC +        Y V+NP + + + +PK +       IGF       + D +SF
Sbjct: 116 SSNGFLLCNRQRV-----YYVYNPATRQRMALPKTQIGMNDPTIGFICKVDDPNRDVISF 175

Query: 61  TILRFGNLGLE-PMEIFSSETGEW--RHLAFNLAMDSLFLPF-EGPSAVVLNGVFYWLEF 120
           TI+R+  +     +E FSSET  W   +L  N+ +   F  + + PSA V++GVF+WL+ 
Sbjct: 176 TIVRYWIVQSNVTIESFSSETNAWIVDNLILNVPLRLYFFVYMKSPSAGVVDGVFFWLDQ 235

Query: 121 RSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDK 180
              I  +D +   F  +GFP E+       F   L  +GG+   A      I +W L+  
Sbjct: 236 GPQITVYDSVHKSFWALGFP-EDMVATGNYF---LGFSGGDFYFALYIKTNITVWQLKSN 295

Query: 181 ASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERI--------- 240
             S    +  L V   V  +A T+              G+ GF   + + +         
Sbjct: 296 IRS----RDALWVRKYVTDVATTV------------PFGLTGFLHTEVQNMDIHPAIPHI 355

Query: 241 -YLNTTEVVVCCDIGSGKVEIVHRFDE 248
            YL+    V+  D+ +   E+VH F E
Sbjct: 356 FYLDVKGKVISYDMETDIAELVHDFGE 357

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022931048.11.2e-141100.00F-box protein At1g52495-like [Cucurbita moschata][more]
XP_022996333.16.6e-14098.80F-box protein At1g52495-like [Cucurbita maxima][more]
XP_004152061.13.8e-9569.88PREDICTED: F-box protein At5g18160 [Cucumis sativus][more]
KGN58298.13.8e-9569.88hypothetical protein Csa_3G609260 [Cucumis sativus][more]
XP_016546044.11.2e-1628.89PREDICTED: F-box protein At5g49610-like [Capsicum annuum][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L8X4|A0A0A0L8X4_CUCSA2.5e-9569.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1[more]
tr|A0A1U8EQ88|A0A1U8EQ88_CAPAN8.0e-1728.89F-box protein At5g49610-like OS=Capsicum annuum OX=4072 GN=LOC107846084 PE=4 SV=... [more]
tr|A0A2G2YHE4|A0A2G2YHE4_CAPAN8.0e-1728.89Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_28665 PE=4 SV=1[more]
tr|A0A200QEP5|A0A200QEP5_9MAGN2.4e-1330.59F-box domain OS=Macleaya cordata OX=56857 GN=BVC80_901g50 PE=4 SV=1[more]
tr|M1CB75|M1CB75_SOLTU7.8e-1227.72Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102578743 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR017451F-box-assoc_interact_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08943-RACarg08943-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 3..176
e-value: 3.9E-14
score: 50.5
NoneNo IPR availablePANTHERPTHR31264FAMILY NOT NAMEDcoord: 2..245
IPR015915Kelch-type beta propellerSUPERFAMILYSSF117281Kelch motifcoord: 5..227

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg08943Silver-seed gourdcarcarB264
Carg08943Silver-seed gourdcarcarB273
Carg08943Silver-seed gourdcarcarB599
Carg08943Silver-seed gourdcarcarB610
Carg08943Silver-seed gourdcarcarB614
Carg08943Silver-seed gourdcarcarB615
Carg08943Cucumber (Gy14) v2carcgybB0770
Carg08943Cucumber (Gy14) v2carcgybB0772
Carg08943Cucumber (Gy14) v1carcgyB0883
Carg08943Cucumber (Gy14) v1carcgyB0887
Carg08943Cucumber (Gy14) v1carcgyB0892
Carg08943Cucurbita maxima (Rimu)carcmaB1074
Carg08943Cucurbita maxima (Rimu)carcmaB1075
Carg08943Cucurbita maxima (Rimu)carcmaB1079
Carg08943Cucurbita maxima (Rimu)carcmaB1082
Carg08943Cucurbita maxima (Rimu)carcmaB1085
Carg08943Cucurbita maxima (Rimu)carcmaB1086
Carg08943Cucurbita maxima (Rimu)carcmaB1089
Carg08943Cucurbita maxima (Rimu)carcmaB1090
Carg08943Cucurbita moschata (Rifu)carcmoB1049
Carg08943Cucurbita moschata (Rifu)carcmoB1052
Carg08943Cucurbita moschata (Rifu)carcmoB1055
Carg08943Cucurbita moschata (Rifu)carcmoB1058
Carg08943Cucurbita moschata (Rifu)carcmoB1061
Carg08943Cucurbita moschata (Rifu)carcmoB1062
Carg08943Cucurbita pepo (Zucchini)carcpeB1087
Carg08943Cucurbita pepo (Zucchini)carcpeB1094
Carg08943Cucurbita pepo (Zucchini)carcpeB1096
Carg08943Cucurbita pepo (Zucchini)carcpeB1097
Carg08943Cucurbita pepo (Zucchini)carcpeB1098
Carg08943Cucurbita pepo (Zucchini)carcpeB1101
Carg08943Wild cucumber (PI 183967)carcpiB0812
Carg08943Wild cucumber (PI 183967)carcpiB0814
Carg08943Cucumber (Chinese Long) v2carcuB0793
Carg08943Cucumber (Chinese Long) v2carcuB0795
Carg08943Cucumber (Chinese Long) v3carcucB0814
Carg08943Cucumber (Chinese Long) v3carcucB0815
Carg08943Cucumber (Chinese Long) v3carcucB0817
Carg08943Bottle gourd (USVL1VR-Ls)carlsiB713
Carg08943Bottle gourd (USVL1VR-Ls)carlsiB718
Carg08943Melon (DHL92) v3.5.1carmeB0772
Carg08943Melon (DHL92) v3.5.1carmeB0777
Carg08943Melon (DHL92) v3.5.1carmeB0780
Carg08943Melon (DHL92) v3.6.1carmedB0785
Carg08943Melon (DHL92) v3.6.1carmedB0790
Carg08943Melon (DHL92) v3.6.1carmedB0791
Carg08943Watermelon (Charleston Gray)carwcgB0758
Carg08943Watermelon (Charleston Gray)carwcgB0757
Carg08943Watermelon (97103) v1carwmB0782
Carg08943Watermelon (97103) v1carwmB0785
Carg08943Watermelon (97103) v2carwmbB0817
Carg08943Watermelon (97103) v2carwmbB0819
Carg08943Wax gourdcarwgoB0914
Carg08943Wax gourdcarwgoB0916