Carg08943 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTAGCAACGGCCTTCTTCTCTGCGGCAAATCCAATCAAAACCCTATTGTCAACTACTCTGTCTGGAATCCCACCTCCAATCGCCTGATTCCAATCCCAAAACCGAGGAATCTCTTCACCGGCGTTAAGATCGGATTCCATTCCCATGATTCTGTTTCGTTCACCATTCTTCGATTTGGGAATTTAGGGCTCGAACCGATGGAGATTTTCTCGTCTGAAACAGGGGAATGGCGGCACTTGGCCTTCAATTTGGCGATGGATTCATTGTTTTTGCCCTTCGAAGGGCCGTCGGCGGTGGTTCTAAACGGGGTGTTTTACTGGCTGGAGTTTCGATCGATGATTTACGCTTTCGATTTGCTCAAAAACGAATTTCTGAAAGTGGGATTTCCATTTGAGGAACCGGAGTATCGCCGGGAAGTATTCTCCCGTTGCCTCGCCGTCGCGGGTGGGGAGGTGGTGATGGCGTCGACCAACGGCGAGGTTATTGAGATTTGGATTCTTCAGGATAAGGCATCGTCTTTGTGGGGTTTGAAGAGTAGATTAAACGTTGAAAGTCTCGTTGGCATTATCGCAAACACCTTGTGCGCAAGGGCGGCGACGGCAGCGGTTGGGCGGAGAATTGTTGGGATTGTGGGGTTTCAAGCATGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGTAGTGGTTTGTTGTGATATTGGAAGTGGGAAAGTTGAGATTGTTCACCGATTTGATGAGAGCTTGGGATGTACGGATGTTTCTGACTTCATGTTCTTACCTTATGAGTGTGTTCAGCTTGGTTGATTGCGGTAATGTTCGTAATGAGTAGAGCCCAGATATTTAAACCCTAACAACTCGGTTAGGATGTGTCCACCCGTTAAGCTTTATTCAATAACACTCATGGTCACTCATGTACATTTGAGTCTTCACATTTTGCTTCAATGTTTCATTTGGTTGACTATAATCATTATTGCTTTCTTTCCTTCGAGCTGATTTCTTGGAAAATAAAAAATTTGGATGAATTCGAGGGTTACAATTTTTTGTTGGGTCAATCCGACCAACTCTTGAAAAATAGGGTTACAACCTTACTTTTAATATTATTTCGAAAATTAAGAATATTGACGTTTATAACCAATGTTAGTATCAATTATGAATGGTTAATGTTTGATATTTGGTTACTAACCTAACCTGTAGTGTCGATAGGTAGGATTTTTTCAATAATTTAAAAAATAAAGTTTGTTTTAGTTTTTCCTATTAATCAATGAAACGATGTCGTATAAAGTCACGTGAAACGGGCTTAGCAAAACACGGAAAGGACAGTAAAGAACTGCGTTTAGACACATTGACTAAAACCCTAACCCCAGCCAACGTAGACTCTGCGCCGTCGTCTTTCATATATTAAGAACCGCATTTGTTAACATTTGCTTTTTTGATCGGAGGATAGAGAAGGCAGCTAGAGAGCCCGTCGACAATGTCGAAGCGAGGTATGGTTTGATCGTTCTATCTCCATTTTGTTCCCGACGTTCTCTTTATATGTAACTGTAAACGCACTAGTTGATTCGATCTTTGTTTTGCTACTGTTTTCATACTCTTAGATTTGAGATTTTTTATTGTTGTGTATCTATTTAGGTAGGGGAGGTTCCGCCGGGAATAAATTTAGGATGTCGCTAGGTCTTCCTGTTGCGGCTACAGTGAACTGTGCCGATAACACAGGAGCTAAGAACCTCTATATCATTTCGGTGAAGGGGATCAAGGGCCGCCTCAACCGTCTGCCATCTGCTTGTGTTGGTGACATGGTCATGGCGACGGTCAAGAAGGGAAAACCTGACCTCAGGAAGAAGGTGCTGCCTGCTGTTATTGTCAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTCTTTATGTACTTCGAAGGTAATTCACTACTTAAATTATCTGTCGTATTTCGCTTCCGATCATTTTTATACCATGTTATCTTGCGTTTAGGTTAGTTTGTGTAGGCATATAGTTATCGTTCTAGTTAACAGTGATCGGTTGGATTGTTGATATTGGATGTAGTATCGGCGGTTATTCTTTGTTGATTGAATCCATCTTAAAATTTGTGGATGATTTCTGTTCTTTATGTGTTGTGGATGAAATTTGGGTTAAGAAAATCCTATTACTCTGTTAGTTTAGTTTCACACAAACATGGTCTGTGTAGATTGTTATTGGGAGTAATTTTGGTGCTTTCTATTTTAATTCGATGGCAATGGTGTTAGATAAAACCTTTTGTTTTTTCTTTATTTAGATTCACACGTTTACATTTATTTCCCTTTGACCATTTTGACAACACGTCGAATGGATTAGCTAATTCTTAGACGTCAATTTTCTAGGAAGTGGCACAGATTCAGTTGGCCACTCTCCACCCATTTTTAGGATAGGTTGTATTTGAATAGGAAAATCTGTTTACAAGATTTCACTACCGGATTTTTGAAGAGCAGTCAAAGTTTCAGTCCTTCTCTCTCTCTTATTTTTACGCATTTATCTTTCCTCCAACAACCTCTGTCGACAATATCCTCTCGGTGATTTCCCTGGCCAATTATCGAAATTTCAACAAGTGGTATCAGAGCCTCGTTGAAGCAATCGGTAGTATATACCATACAAGAAGAGCCATACCTATCAACAATCAAGTTGAATAGCTCAGTGGTTAGAGCGTCGACCTAACAACACACAGGTCTCAGGTTCGAGTAGAAGAAAATGCAAAGTGCAAAAATAAATACATCGTCGTGGGGTCCATCTCGAGCAGGCTCGCTCACTCCTCCACGTCGCCAAGTGCTGGCATCTCCATCACCACCCACGAAGAGGTCGTGGCCGACGCCGTGATGACGGGCGTCGAGGTGTCGTTGAGCGAGTGATCAGGGAGACAACGACTGTCGTCGTTCAGTACCCGATGTTGACAAGGTTCAACTACAACGAGTGGGCCTTGTTGATATGCGCGTCAACCTACAGGCGCATGGGTTATGGCACGCTGTCGAGCCAGAGGAAGGAGAAACAATCGAGTACCGGGAGGATCGGCTGGCGTTCGCCGCCATATTACGATCTGTGCCCCCAGAGATGTTGGCATCTCTCTCCACCAAGCGCACCGCGCAATCGGCCTGGGAAGGAATTAAAATCCCGTCGATCGGTGTACAGCGAGTGCGGGAATCCAACATTGAGCAGCTGCGGAAGGAGCTCTCGGGGATCTCCTTTAAGGACGGCGAATCCATCGATGATTTTTCAATGCGAATCACGGGGCTCGCCAACAGCATCAACGAGACAGAAATCGTGAAGAAGATGCTGCAGGTCATCCCCGATCACCTCGAGCAAGTTGCAATTTCAATCGAGACATTGCTTGACGTGAATGACCTAACGGTGGAAGAGGTGACCGGAAGACTGCGTAACGTCGGCAGCGGAAGAAAAATACCATTTCAGCTGTCGACAAGGAGGGTCCGTCTACTCCTCACTGAGGAGGAATGCTTGCCACGCCTAAAGCTCCGTGATGACCACCGGCGAGAGCAATGGGCCCTCCAGCCGCAAAGGCGGTAAGAAGCCGTGGAAATCTCGATGGCGCATGCACAGGAAAAGAGGCGGATCAAAAGAAGGAGGGTCGACTGATGACGGGCCATCCATCCAGTGCTCGTACTGTGGGAAGAGAGGTCACCTGAGGCAAGAATTGCTGGAGCAAGCTCAGGAACAAGGAGACGGCCGAAAAGGCCCATGTGGCTCAATCCGAGGAGGATGAGCCGGCCTTTTTCATGTGGACTGCATCAGTCCTACCTGACCTCGAACCCGAGGAAGAGCTCCCCAAATCCACAGAGGTAATCGACGACGGCATAACTGCTCCGGGTGAGCGTCGAACCCGAGGAAGAGCTCCCCAAATCCACAGAGGTAATCGACGACGGCATAACTGCTCCGGTGAACGTCGAACCCGAGGAAGAACTCCAACTGTGCATAACAAATGCACCTGGGGAGCCAATTCGACTAAAGGAGGAGCGAGTGCTCGCTCAAATCGGTGAAAGAGGCAAGCAGCAAGAGCACCGGCGATGGGTCCTCGACACGGGGGCATCAAACCATATGACCGGGCCAAGTCTGCGTTCTCTGAGCTTGACTCGGGGATTCGCGGGACGGTGAAATTCGGCGATGGCTCCGTCGTCGAGATCGAAGGGCACGGTACCATCCTATTCGTCGGCAAGGGAGGCAATCATCACAAGCTGACCGGCGTCTACTTCATCCCGAGACTCAAGGCTAATATTGTGAGCCTGGGTCAACTCGATAAGGCCGGCTGCCACATTTCCATCAAAACGCGGGCTACTTAGGATCCGCGATGATCGACGACGGTTGCTCACGCAAGTTCGGTGCACGACAAATTGCCTTTACATCCTAAAGCTAGAGATAGAGACAACCAGTCAACTTCTCGGCCAGGTACCGGAAGATGAAGAAGACCTATTAGGAAGAGGTGAACCACCTGGACTGGGGGCGCGCCAACTCGAAGAAGAGGCGGCCGAACAAGACGTGGAGTCTGGAGGACATGCCGCCAGGGACACCGAGCCATAGGGCTCAAAACGGAGTTCAAAAACGAAACGAAATAAGGCAAGGCAGATATAACACAGGTTTTAGGAGGAGATTGTTAGATAAAACCTTTGTTTTTTCTTTTATTAGATTCACACGTTTACATTTAATTTTCCCTTTGACCATTTGACAAACACGTCGAATGGATTAGCTAATTCTTAGACGTCAATTTTCTAGGAAGTGGCACAGATTCAGTTGGCCACCCTCCACCCATTTTTAGGATAGGTTGTATTTAAATAGGAAATCTGTTTACAAGATTTCACTACCGGATTTTGAAGAGCAGTCAAAGTTTCAGTCCTTCTCTCTCTCTCTTATTTTACGCATTTTATCTTTCCTCCAACAACCTCCTGTCGACAATATCCTCTCGGTGATTTCCCTGGCCAATTATCGAAATTCAACAAATGGTTATTCAGAGAAGCGAATATCTCCATTTTTCACTTTGGATTAAATGGCTTACTATGTGATCTAGTAGTAGCGTTTTTATTATAAGAATGGCTATCGGGTTATGTGTTTAGTATCATATTGTTGTCAATTTTTTAGGACTGTTTCATGTCTTCACCCATATAAAATCGAATTATATAGTTGTTGAATAAGATTCTTTTTCCTTGTGCAGATAATGCTGGTGTCATCGTGAATCCCAAAGGAGAGATGAAAGGTATGATCTTCTCCTTCTTTAATGTATATAGTTCATATGTGATCTAGAAAATGATATGTAACATGTTAATCTTCTGTATTCATTTACAATAGAAGAAGAGAAATCATCACGCCCTCAATATTTCACTTTTGTTGATGTGTTATTTCTCTGGAATAATGCACCCGAACAGCTAGAAATGTAGTTTTATAGTACTGATAATTTTGATTCTCTATGCTTTGGAGGTGTTCTAGCCTTCATACTTCGTTTATTTTGCTTCCATGGATTTGAATGGTTATTTTCTTGGGTCTCGCAGGTTCTGCTATAACAGGCCCAATTGGAAAGGAATGTGCGGATCTCTGGCCGAGAATTGCAAGTGCTGCCAATGCTATTGTTTGACCATCAAATCAAGTGAATTGTCGTTTTTATCCTTCTAGGCTAGGATTATATGATTAAATTTCATTGTTGGGATTAACTTACTTTATCTTGACAAGAAATTATCGTTATGAGTTTTGGTTGATACTCAATGTGTTTTATCTCTATAGATGAAGTTAATTTGTGCCCATGATTTGATTTCTGGTACCCATTCAAAATTCTCCCTATCAGATTGTCTGCAGGGTAGGGAAGGAAATGATCGGGAGGAAACCTTGTCATTTCTAGGCATTGCAGTGAGGGTCGTGGTTGTGGATATCGGTCCTCTCGGGAATTAACGAGGTATCGGAATTCTGAACATAAAATTTTCCCTCACATAAGTCTATAAGAATCAGGAACAGGAAAAACTAGAGAAGTTTCCATTTCCATGTTTGTTTAATGCCATATATGCCTCTCTGATTG TCTAGCAACGGCCTTCTTCTCTGCGGCAAATCCAATCAAAACCCTATTGTCAACTACTCTGTCTGGAATCCCACCTCCAATCGCCTGATTCCAATCCCAAAACCGAGGAATCTCTTCACCGGCGTTAAGATCGGATTCCATTCCCATGATTCTGTTTCGTTCACCATTCTTCGATTTGGGAATTTAGGGCTCGAACCGATGGAGATTTTCTCGTCTGAAACAGGGGAATGGCGGCACTTGGCCTTCAATTTGGCGATGGATTCATTGTTTTTGCCCTTCGAAGGGCCGTCGGCGGTGGTTCTAAACGGGGTGTTTTACTGGCTGGAGTTTCGATCGATGATTTACGCTTTCGATTTGCTCAAAAACGAATTTCTGAAAGTGGGATTTCCATTTGAGGAACCGGAGTATCGCCGGGAAGTATTCTCCCGTTGCCTCGCCGTCGCGGGTGGGGAGGTGGTGATGGCGTCGACCAACGGCGAGGTTATTGAGATTTGGATTCTTCAGGATAAGGCATCGTCTTTGTGGGGTTTGAAGAGTAGATTAAACGTTGAAAGTCTCGTTGGCATTATCGCAAACACCTTGTGCGCAAGGGCGGCGACGGCAGCGGTTGGGCGGAGAATTGTTGGGATTGTGGGGTTTCAAGCATGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGTAGTGGTTTGTTGTGATATTGGAAGTGGGAAAGTTGAGATTGTTCACCGATTTGATGAGAGCTTGGGATAGAAGGCAGCTAGAGAGCCCGTCGACAATGTCGAAGCGAGGTATGGTAGGGGAGGTTCCGCCGGGAATAAATTTAGGATGTCGCTAGGTCTTCCTGTTGCGGCTACAGTGAACTGTGCCGATAACACAGGAGCTAAGAACCTCTATATCATTTCGGTGAAGGGGATCAAGGGCCGCCTCAACCGTCTGCCATCTGCTTGTGTTGGTGACATGGTCATGGCGACGGTCAAGAAGGGAAAACCTGACCTCAGGAAGAAGGTGCTGCCTGCTGTTATTGTCAGGCAGCGCAAGCCATGGCGCCGAAAGGATGGTGTCTTTATGTACTTCGAAGATAATGCTGGTGTCATCGTGAATCCCAAAGGAGAGATGAAAGGTTCTGCTATAACAGGCCCAATTGGAAAGGAATGTGCGGATCTCTGGCCGAGAATTGCAAGTGCTGCCAATGCTATTGTTTGACCATCAAATCAAGTGAATTGTCGTTTTTATCCTTCTAGGCTAGGATTATATGATTAAATTTCATTGTTGGGATTAACTTACTTTATCTTGACAAGAAATTATCGTTATGAGTTTTGGTTGATACTCAATGTGTTTTATCTCTATAGATGAAGTTAATTTGTGCCCATGATTTGATTTCTGGTACCCATTCAAAATTCTCCCTATCAGATTGTCTGCAGGGTAGGGAAGGAAATGATCGGGAGGAAACCTTGTCATTTCTAGGCATTGCAGTGAGGGTCGTGGTTGTGGATATCGGTCCTCTCGGGAATTAACGAGGTATCGGAATTCTGAACATAAAATTTTCCCTCACATAAGTCTATAAGAATCAGGAACAGGAAAAACTAGAGAAGTTTCCATTTCCATGTTTGTTTAATGCCATATATGCCTCTCTGATTG TCTAGCAACGGCCTTCTTCTCTGCGGCAAATCCAATCAAAACCCTATTGTCAACTACTCTGTCTGGAATCCCACCTCCAATCGCCTGATTCCAATCCCAAAACCGAGGAATCTCTTCACCGGCGTTAAGATCGGATTCCATTCCCATGATTCTGTTTCGTTCACCATTCTTCGATTTGGGAATTTAGGGCTCGAACCGATGGAGATTTTCTCGTCTGAAACAGGGGAATGGCGGCACTTGGCCTTCAATTTGGCGATGGATTCATTGTTTTTGCCCTTCGAAGGGCCGTCGGCGGTGGTTCTAAACGGGGTGTTTTACTGGCTGGAGTTTCGATCGATGATTTACGCTTTCGATTTGCTCAAAAACGAATTTCTGAAAGTGGGATTTCCATTTGAGGAACCGGAGTATCGCCGGGAAGTATTCTCCCGTTGCCTCGCCGTCGCGGGTGGGGAGGTGGTGATGGCGTCGACCAACGGCGAGGTTATTGAGATTTGGATTCTTCAGGATAAGGCATCGTCTTTGTGGGGTTTGAAGAGTAGATTAAACGTTGAAAGTCTCGTTGGCATTATCGCAAACACCTTGTGCGCAAGGGCGGCGACGGCAGCGGTTGGGCGGAGAATTGTTGGGATTGTGGGGTTTCAAGCATGGGATTCGGAAAGGATTTACTTGAACACGACGGAGGTAGTGGTTTGTTGTGATATTGGAAGTGGGAAAGTTGAGATTGTTCACCGATTTGATGAGAGCTTGGGATAG SSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLG
BLAST of Carg08943 vs. NCBI nr
Match: XP_022931048.1 (F-box protein At1g52495-like [Cucurbita moschata]) HSP 1 Score: 511.9 bits (1317), Expect = 1.2e-141 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of Carg08943 vs. NCBI nr
Match: XP_022996333.1 (F-box protein At1g52495-like [Cucurbita maxima]) HSP 1 Score: 506.1 bits (1302), Expect = 6.6e-140 Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of Carg08943 vs. NCBI nr
Match: XP_004152061.1 (PREDICTED: F-box protein At5g18160 [Cucumis sativus]) HSP 1 Score: 357.5 bits (916), Expect = 3.8e-95 Identity = 174/249 (69.88%), Postives = 202/249 (81.12%), Query Frame = 0
BLAST of Carg08943 vs. NCBI nr
Match: KGN58298.1 (hypothetical protein Csa_3G609260 [Cucumis sativus]) HSP 1 Score: 357.5 bits (916), Expect = 3.8e-95 Identity = 174/249 (69.88%), Postives = 202/249 (81.12%), Query Frame = 0
BLAST of Carg08943 vs. NCBI nr
Match: XP_016546044.1 (PREDICTED: F-box protein At5g49610-like [Capsicum annuum]) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16 Identity = 78/270 (28.89%), Postives = 122/270 (45.19%), Query Frame = 0
BLAST of Carg08943 vs. TrEMBL
Match: tr|A0A0A0L8X4|A0A0A0L8X4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 2.5e-95 Identity = 174/249 (69.88%), Postives = 202/249 (81.12%), Query Frame = 0
BLAST of Carg08943 vs. TrEMBL
Match: tr|A0A1U8EQ88|A0A1U8EQ88_CAPAN (F-box protein At5g49610-like OS=Capsicum annuum OX=4072 GN=LOC107846084 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 8.0e-17 Identity = 78/270 (28.89%), Postives = 122/270 (45.19%), Query Frame = 0
BLAST of Carg08943 vs. TrEMBL
Match: tr|A0A2G2YHE4|A0A2G2YHE4_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_28665 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 8.0e-17 Identity = 78/270 (28.89%), Postives = 122/270 (45.19%), Query Frame = 0
BLAST of Carg08943 vs. TrEMBL
Match: tr|A0A200QEP5|A0A200QEP5_9MAGN (F-box domain OS=Macleaya cordata OX=56857 GN=BVC80_901g50 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.4e-13 Identity = 67/219 (30.59%), Postives = 101/219 (46.12%), Query Frame = 0
BLAST of Carg08943 vs. TrEMBL
Match: tr|M1CB75|M1CB75_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102578743 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 7.8e-12 Identity = 74/267 (27.72%), Postives = 116/267 (43.45%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |