Cla005868 (gene) Watermelon (97103) v1

Overview
NameCla005868
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionDEHYDROGENASE/REDUCTASE (AHRD V1 ***- O53726_MYCTU); contains Interpro domain(s) IPR002198 Short-chain dehydrogenase/reductase SDR
LocationChr1 : 7717389 .. 7719050 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGAGATAAAAAAGCAGAATGAAAAAGCCCTTCTTAAAGCTTTTCAAGTCGATCTTCTATCCATTCAGTCAATCTTGGATTTCAAGAATTCCCTTCAGCTTTGGCTCCAAGACTCTAAAATGCATCCTTCAGTACAACTTTTGATTAATAATGCTGGGATATTGGCAACATCTTCTAGATTCACATCGGAAGGCTACGACCAGTTACATCTCTATTCCCTGTCTTTGTTCAAGTGTGTTACTCTTGCAATAATGCAGTGATTGAGACAGTACTGTACTTCGGAACTTAAATATAAACATTGCTTAAAACTAACTGGATCTTTGGTAGGTTCGTATAGTTTTTATTTTCTAATACAAAAAATGTCGGGGGTGAGGGATTAAATCTTTGACTTTGGATTGGTTTAAATATAGTTAATGGGAAAACTGCTGGTTGAAACTTAATACTCTCACGTGTCTCTATGAACTATTGTTCACTATGAGATAATGAACTATTATGTCATCCATTTGGTCCAGCTTTACCATTATTCTAAAACGTACAATTGCTTCTTCATATGCTGAAATTGGGTTCTTCTCTCTGAAGTTTTTGGTTTTATTTTGTCATTTTGATTTTCTGATGTATTATTCTATGTTGTTTTACACCTTATTTCTTCAAGATATTTGCAATGAGCCTTACCTTTATAACTTCTTATATTCCTAGGATGATGGCTACAAATTATATTGGTCCGTTCTTTTTGACTCAAATGTTATTGCCACTCCTGAAGAACAGCCCTTTTCCATCTAGGATAGTGAATGTCTCATCCTTTACGCATAGATGCGGTAAGAATTTTCTGTAAAAGCAATTGTTATAATAATAATAATAATGGCTTCATTGTGTTCTACAGTTTTTGATGTGCAGGTTGACGAGGATACTGTATGTGGAAATTGCTTCAGGGTATTGGATCAATATCCATGTTCTAGTATCTATGAGTATTCTAAATGTGAGCAATTAATGTTTTGAGAAGCAATTTATGATACTATTAATGACTCTGACAAGCATATCCATTTTCTGTTACAGTATGCCTACTGCTGTTCTCCTATGAGCTTCACCGAAAACTTTCCTTAGAGAATGGATCTCATAAATTAACTGTCATGTAAGGAAACTTTTGTCTTATTGCCTTTTTATTATCCTTGTTCCATACTATCCTTAAAGGCTTCTGATACGGTTCTGCTGATTTTTGTTTATATTTGTTTGTTTGTTAAATGTGAATTCTTGAATTTCTGAAGTGTAGCGGATCCTGGAGTTGTCAAAACGAACATCATGAGAGAAGTTCCTGCATATTTAGCTAGGGTAGCATTTACAATATTGAGGCTTTTGAGACTTCTACAACTACCTAAAGATGGTGTCAACTCCATTTTGGATGCTGCCCTTGCATCACCTGTGAGTGAATCTTTTGTGCTTGTGAGAGTGTGTTTCATAGTTCTGTTAAGATCTTCAATTGAATATACTGAACTTTCTTCTGTCAGGAAACATCTGGGGTATACTTTTTCGGTGGAAAGGGTAGGATGGTCAAATCCTCTGCTCGGTCGTACAACACAAAACTTGCCGAGGAGCTTTGGGAAACATCGTCGAATCTGTTTTTGAAATCCCAGATTACTATTGGGGGAGAAACCAGTTCTTAA

mRNA sequence

ATGTCAGAGATAAAAAAGCAGAATGAAAAAGCCCTTCTTAAAGCTTTTCAAGTCGATCTTCTATCCATTCAGTCAATCTTGGATTTCAAGAATTCCCTTCAGCTTTGGCTCCAAGACTCTAAAATGCATCCTTCAGTACAACTTTTGATTAATAATGCTGGGATATTGGCAACATCTTCTAGATTCACATCGGAAGGCTACGACCAGATGATGGCTACAAATTATATTGGTCCGTTCTTTTTGACTCAAATGTTATTGCCACTCCTGAAGAACAGCCCTTTTCCATCTAGGATAGTGAATGTCTCATCCTTTACGCATAGATGCGTTTTTGATGTGCAGGTTGACGAGGATACTGTATGTGGAAATTGCTTCAGGGTATTGGATCAATATCCATGTTCTAGTATCTATGAGTATTCTAAATTATGCCTACTGCTGTTCTCCTATGAGCTTCACCGAAAACTTTCCTTAGAGAATGGATCTCATAAATTAACTGTCATTGTAGCGGATCCTGGAGTTGTCAAAACGAACATCATGAGAGAAGTTCCTGCATATTTAGCTAGGGTAGCATTTACAATATTGAGGCTTTTGAGACTTCTACAACTACCTAAAGATGGTGTCAACTCCATTTTGGATGCTGCCCTTGCATCACCTGAAACATCTGGGGTATACTTTTTCGGTGGAAAGGGTAGGATGGTCAAATCCTCTGCTCGGTCGTACAACACAAAACTTGCCGAGGAGCTTTGGGAAACATCGTCGAATCTGTTTTTGAAATCCCAGATTACTATTGGGGGAGAAACCAGTTCTTAA

Coding sequence (CDS)

ATGTCAGAGATAAAAAAGCAGAATGAAAAAGCCCTTCTTAAAGCTTTTCAAGTCGATCTTCTATCCATTCAGTCAATCTTGGATTTCAAGAATTCCCTTCAGCTTTGGCTCCAAGACTCTAAAATGCATCCTTCAGTACAACTTTTGATTAATAATGCTGGGATATTGGCAACATCTTCTAGATTCACATCGGAAGGCTACGACCAGATGATGGCTACAAATTATATTGGTCCGTTCTTTTTGACTCAAATGTTATTGCCACTCCTGAAGAACAGCCCTTTTCCATCTAGGATAGTGAATGTCTCATCCTTTACGCATAGATGCGTTTTTGATGTGCAGGTTGACGAGGATACTGTATGTGGAAATTGCTTCAGGGTATTGGATCAATATCCATGTTCTAGTATCTATGAGTATTCTAAATTATGCCTACTGCTGTTCTCCTATGAGCTTCACCGAAAACTTTCCTTAGAGAATGGATCTCATAAATTAACTGTCATTGTAGCGGATCCTGGAGTTGTCAAAACGAACATCATGAGAGAAGTTCCTGCATATTTAGCTAGGGTAGCATTTACAATATTGAGGCTTTTGAGACTTCTACAACTACCTAAAGATGGTGTCAACTCCATTTTGGATGCTGCCCTTGCATCACCTGAAACATCTGGGGTATACTTTTTCGGTGGAAAGGGTAGGATGGTCAAATCCTCTGCTCGGTCGTACAACACAAAACTTGCCGAGGAGCTTTGGGAAACATCGTCGAATCTGTTTTTGAAATCCCAGATTACTATTGGGGGAGAAACCAGTTCTTAA

Protein sequence

MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSSRFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVCGNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMREVPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYNTKLAEELWETSSNLFLKSQITIGGETSS
Homology
[Close]
BLAST of Cla005868 vs. Swiss-Prot
Match: DHRSX_HUMAN (Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 2.8e-23
Identity = 92/260 (35.38%), Postives = 136/260 (52.31%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           +S+IK++     ++    DL S+ SI  F    ++     K  P + +LINNAG++    
Sbjct: 84  VSKIKEETLNDKVEFLYCDLASMTSIRQFVQKFKM-----KKIP-LHVLINNAGVMMVPQ 143

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFP---SRIVNVSSFTHRCVFDVQVDED 120
           R T +G+++    NY+G F LT +LL  LK S  P   +R+V VSS TH  V ++ +D D
Sbjct: 144 RKTRDGFEEHFGLNYLGHFLLTNLLLDTLKESGSPGHSARVVTVSSATHY-VAELNMD-D 203

Query: 121 TVCGNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNI 180
                C      Y   + Y  SKL L+LF+Y L R L+ E GSH +T  V DPGVV T++
Sbjct: 204 LQSSAC------YSPHAAYAQSKLALVLFTYHLQRLLAAE-GSH-VTANVVDPGVVNTDV 263

Query: 181 MREVPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGV---YFFGGKGRMVKS 240
            + V  +  R+A  +L  L L + P +G  + + AA+ +PE  GV   Y +  K    KS
Sbjct: 264 YKHV-FWATRLAKKLLGWL-LFKTPDEGAWTSIYAAV-TPELEGVGGHYLYNEK--ETKS 322

Query: 241 SARSYNTKLAEELWETSSNL 255
              +YN KL ++LW  S  +
Sbjct: 324 LHVTYNQKLQQQLWSKSCEM 322

[Close]
BLAST of Cla005868 vs. Swiss-Prot
Match: RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16
Identity = 78/238 (32.77%), Postives = 117/238 (49.16%), Query Frame = 1 

Query: 17  QVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSSRFTSEGYDQMMATNYI 76
           ++DL S++S+  F    Q  LQ+    P + +LINNAGI       T +G++     N++
Sbjct: 113 ELDLASLRSVRAF---CQEMLQEE---PRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHL 172

Query: 77  GPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVCGNCFRVLDQYPCSSIY 136
           G F LT +LL LLK+S  PSRIV VSS  ++   D+  D+             Y  S  Y
Sbjct: 173 GHFLLTNLLLGLLKSSA-PSRIVVVSSKLYK-YGDINFDD-------LNSEQSYNKSFCY 232

Query: 137 EYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMREVPAYLARVAFTILRLL 196
             SKL  +LF+ EL R+L   N    +TV V  PG+V+TN+ R +   L       L   
Sbjct: 233 SRSKLANILFTRELARRLEGTN----VTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVSW 292

Query: 197 RLLQLPKDGVNSILDAALASPETSGV---YFFGGKGRMVKSSARSYNTKLAEELWETS 252
              + P +G  + +  A +SPE  GV   YF  G  +  +   ++ +  +A +LW+ S
Sbjct: 293 AFFKTPVEGAQTSIYLA-SSPEVEGVSGRYF--GDCKEEELLPKAMDESVARKLWDIS 328

[Close]
BLAST of Cla005868 vs. Swiss-Prot
Match: TIC32_ARATH (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 7.4e-16
Identity = 85/273 (31.14%), Postives = 133/273 (48.72%), Query Frame = 1 

Query: 3   EIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSSRF 62
           +I KQ   A L   ++DL S+QS+  F +  +     S   P + LLINNAGI+A     
Sbjct: 72  DIVKQVPGAKLDVMELDLSSMQSVRKFASEYK-----STGLP-LNLLINNAGIMACPFML 131

Query: 63  TSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPS----RIVNVSSFTHRCVFDVQVDEDT 122
           + +  +   ATN++G F LT++LL  +K++   S    RIVN+SS  HR  +   V  D 
Sbjct: 132 SKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFDK 191

Query: 123 VCGNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIM 182
           +          Y     Y  SKLC +L + EL ++L  E+G + +T     PG + TN+ 
Sbjct: 192 INDK-----SSYSSMRAYGQSKLCNVLHANELTKQLK-EDGVN-ITANSLHPGAIMTNLG 251

Query: 183 REVPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGV---YFFGGKGRMVKSS 242
           R    YLA     + + + L  +P+    +   A   +P+ +GV   YF      + K  
Sbjct: 252 RYFNPYLAVAVGAVAKYI-LKSVPQGAATTCYVA--LNPQVAGVSGEYF--QDSNIAKPL 311

Query: 243 ARSYNTKLAEELWETSSNLFLKSQITIGGETSS 269
               +T+LA+++W+ S+ L   SQ    GE+SS
Sbjct: 312 PLVKDTELAKKVWDFSTKL-TDSQ---SGESSS 322

[Close]
BLAST of Cla005868 vs. Swiss-Prot
Match: RDH14_MOUSE (Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 76/239 (31.80%), Postives = 120/239 (50.21%), Query Frame = 1 

Query: 17  QVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSSRFTSEGYDQMMATNYI 76
           ++DL S++S+  F   L   LQ+    P + +LINNAG+       T +G++     N++
Sbjct: 111 ELDLASLRSVRAFCQEL---LQEE---PRLDVLINNAGVFHCPYTKTEDGFEMQFGVNHL 170

Query: 77  GPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVCGNCFRVLDQYPCSSIY 136
           G F LT +LL LLK+S  PSRIV VSS  ++   ++  ++             Y  S  Y
Sbjct: 171 GHFLLTNLLLGLLKSSA-PSRIVVVSSKLYK-YGEINFED-------LNSEQSYNKSFCY 230

Query: 137 EYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMREVP-AYLARVAFTILRL 196
             SKL  +LF+ EL R+L   N    +TV V  PG+V+TN+ R +    LAR  F ++  
Sbjct: 231 SRSKLANILFTRELARRLEGTN----VTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVS- 290

Query: 197 LRLLQLPKDGVNSILDAALASPETSGV---YFFGGKGRMVKSSARSYNTKLAEELWETS 252
               + P +G  + +  A  SP+  GV   YF  G  +  +   ++ +  +A +LW+ S
Sbjct: 291 WAFFKTPLEGAQTSIYLA-CSPDVEGVSGRYF--GDCKEEELLPKAMDESVARKLWDIS 326

[Close]
BLAST of Cla005868 vs. Swiss-Prot
Match: DHRSX_MOUSE (Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 3.1e-14
Identity = 73/233 (31.33%), Postives = 111/233 (47.64%), Query Frame = 1 

Query: 18  VDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSSRFTSEGYDQMMATNYIG 77
           +DL S+ S+  F    Q       +   + LL+NNAG++      T +G+++ +  N++G
Sbjct: 101 LDLASLASVRGFARDFQA------LGLPLHLLVNNAGVMLEPRAETEDGFERHLGVNFLG 160

Query: 78  PFFLTQMLLPLLKNSPFP---SRIVNVSSFTHRCVFDVQVDEDTVCGNCFRVLDQYPCSS 137
            F LT +LLP L+ S      SR+V V S TH   +   VD   + G        Y   +
Sbjct: 161 HFLLTLLLLPALRASGAEGRGSRVVTVGSATH---YVGTVDMADLHGR-----HAYSPYA 220

Query: 138 IYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMREVPAYLARVAFTILR 197
            Y  SKL L LF+ +L R L        +T  +ADPGVV T + R    ++ R A   L 
Sbjct: 221 AYAQSKLALALFALQLQRILDARGDP--VTSNMADPGVVDTELYRHA-GWVLRTAKRFLG 280

Query: 198 LLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYNTKLAEEL 248
            L + + P++G  +++ AA A+PE  GV   GG+    ++ A    T   +EL
Sbjct: 281 WL-VFKSPEEGAWTLVYAA-AAPELEGV---GGRYLRDEAEAEPLGTARDQEL 311

[Close]
BLAST of Cla005868 vs. TrEMBL
Match: A0A067DZE9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017580mg PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95
Identity = 180/260 (69.23%), Postives = 214/260 (82.31%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           M++I  +N+ A L+AFQVDL S QS+L FK+SLQ WL DS MH S+QLLINNAGILATSS
Sbjct: 100 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 159

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R T EGYDQMM+TNYIG FFLT++LLPLLKNSP PSRIVNV+SFTHR VF+ QV+ +T+ 
Sbjct: 160 RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 219

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G  F     YPC+ IYEYSKLCLL+FSYELHR L L+   H ++VI ADPGVVKTNIMRE
Sbjct: 220 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 279

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP++L+ +AFT+L+LL LLQ P+ G+NS+LDAALA PETSGVYFFGGKGR V SSA S+N
Sbjct: 280 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 339

Query: 241 TKLAEELWETSSNLFLKSQI 261
           +KLA ELW TS NLF+ SQ+
Sbjct: 340 SKLAGELWTTSCNLFINSQL 358

[Close]
BLAST of Cla005868 vs. TrEMBL
Match: A0A067E0G0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017580mg PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95
Identity = 180/260 (69.23%), Postives = 214/260 (82.31%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           M++I  +N+ A L+AFQVDL S QS+L FK+SLQ WL DS MH S+QLLINNAGILATSS
Sbjct: 104 MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 163

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R T EGYDQMM+TNYIG FFLT++LLPLLKNSP PSRIVNV+SFTHR VF+ QV+ +T+ 
Sbjct: 164 RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 223

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G  F     YPC+ IYEYSKLCLL+FSYELHR L L+   H ++VI ADPGVVKTNIMRE
Sbjct: 224 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 283

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP++L+ +AFT+L+LL LLQ P+ G+NS+LDAALA PETSGVYFFGGKGR V SSA S+N
Sbjct: 284 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 343

Query: 241 TKLAEELWETSSNLFLKSQI 261
           +KLA ELW TS NLF+ SQ+
Sbjct: 344 SKLAGELWTTSCNLFINSQL 362

[Close]
BLAST of Cla005868 vs. TrEMBL
Match: A0A067DN07_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017580mg PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95
Identity = 180/260 (69.23%), Postives = 214/260 (82.31%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           M++I  +N+ A L+AFQVDL S QS+L FK+SLQ WL DS MH S+QLLINNAGILATSS
Sbjct: 1   MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 60

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R T EGYDQMM+TNYIG FFLT++LLPLLKNSP PSRIVNV+SFTHR VF+ QV+ +T+ 
Sbjct: 61  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 120

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G  F     YPC+ IYEYSKLCLL+FSYELHR L L+   H ++VI ADPGVVKTNIMRE
Sbjct: 121 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 180

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP++L+ +AFT+L+LL LLQ P+ G+NS+LDAALA PETSGVYFFGGKGR V SSA S+N
Sbjct: 181 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 240

Query: 241 TKLAEELWETSSNLFLKSQI 261
           +KLA ELW TS NLF+ SQ+
Sbjct: 241 SKLAGELWTTSCNLFINSQL 259

[Close]
BLAST of Cla005868 vs. TrEMBL
Match: A0A067DNF0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017580mg PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-95
Identity = 180/260 (69.23%), Postives = 214/260 (82.31%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           M++I  +N+ A L+AFQVDL S QS+L FK+SLQ WL DS MH S+QLLINNAGILATSS
Sbjct: 27  MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 86

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R T EGYDQMM+TNYIG FFLT++LLPLLKNSP PSRIVNV+SFTHR VF+ QV+ +T+ 
Sbjct: 87  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 146

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G  F     YPC+ IYEYSKLCLL+FSYELHR L L+   H ++VI ADPGVVKTNIMRE
Sbjct: 147 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 206

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP++L+ +AFT+L+LL LLQ P+ G+NS+LDAALA PETSGVYFFGGKGR V SSA S+N
Sbjct: 207 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 266

Query: 241 TKLAEELWETSSNLFLKSQI 261
           +KLA ELW TS NLF+ SQ+
Sbjct: 267 SKLAGELWTTSCNLFINSQL 285

[Close]
BLAST of Cla005868 vs. TrEMBL
Match: V4V1K4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001762mg PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.7e-94
Identity = 178/260 (68.46%), Postives = 213/260 (81.92%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           M++I  +N+ A L+AFQVDL S QS+L FK+SLQ WL DS MH S+QLLINNAGILATSS
Sbjct: 72  MADITSRNKDACLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 131

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R T EGYDQMM+TNYIG FFLT++LLPLLKNSP PSRIVNV+SFTHR +F+ QV+ +T+ 
Sbjct: 132 RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNMFNAQVNNETIT 191

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G  F     YPC+ IYEYSKL LL+FSYELHR L L+   H ++VI ADPGVVKTNIMRE
Sbjct: 192 GKFFLRSKCYPCARIYEYSKLYLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 251

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP++L+ +AFT+L+LL LLQ P+ G+NS+LDAALA PETSGVYFFGGKGR V SSA S+N
Sbjct: 252 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 311

Query: 241 TKLAEELWETSSNLFLKSQI 261
           +KLA ELW TS NLF+ SQ+
Sbjct: 312 SKLAGELWTTSCNLFINSQL 330

[Close]
BLAST of Cla005868 vs. NCBI nr
Match: gi|659072559|ref|XP_008466153.1| (PREDICTED: retinol dehydrogenase 13-like isoform X2 [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 1.8e-134
Identity = 246/268 (91.79%), Postives = 256/268 (95.52%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           MSEIK+QNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLL+NNAGILATSS
Sbjct: 76  MSEIKRQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLVNNAGILATSS 135

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R TSEGYDQMMATNY+GPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC
Sbjct: 136 RLTSEGYDQMMATNYVGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 195

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G CF  LDQYPCSSIY+YSKLCLLLFSYELHRKLSLEN SHKLTV VADPGVVKTNIMRE
Sbjct: 196 GKCFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLENESHKLTVNVADPGVVKTNIMRE 255

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP YL+RVAFTIL LLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGR V+SSA+SY+
Sbjct: 256 VPTYLSRVAFTILMLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRRVRSSAQSYD 315

Query: 241 TKLAEELWETSSNLFLKSQITIGGETSS 269
            KLAEELWETSSNLFLKSQI++ G TSS
Sbjct: 316 AKLAEELWETSSNLFLKSQISVEGGTSS 343

[Close]
BLAST of Cla005868 vs. NCBI nr
Match: gi|659072555|ref|XP_008466139.1| (PREDICTED: retinol dehydrogenase 13-like isoform X1 [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 1.8e-134
Identity = 246/268 (91.79%), Postives = 256/268 (95.52%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           MSEIK+QNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLL+NNAGILATSS
Sbjct: 111 MSEIKRQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLVNNAGILATSS 170

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R TSEGYDQMMATNY+GPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC
Sbjct: 171 RLTSEGYDQMMATNYVGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 230

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G CF  LDQYPCSSIY+YSKLCLLLFSYELHRKLSLEN SHKLTV VADPGVVKTNIMRE
Sbjct: 231 GKCFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLENESHKLTVNVADPGVVKTNIMRE 290

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP YL+RVAFTIL LLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGR V+SSA+SY+
Sbjct: 291 VPTYLSRVAFTILMLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRRVRSSAQSYD 350

Query: 241 TKLAEELWETSSNLFLKSQITIGGETSS 269
            KLAEELWETSSNLFLKSQI++ G TSS
Sbjct: 351 AKLAEELWETSSNLFLKSQISVEGGTSS 378

[Close]
BLAST of Cla005868 vs. NCBI nr
Match: gi|449463521|ref|XP_004149482.1| (PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 2.0e-130
Identity = 242/268 (90.30%), Postives = 252/268 (94.03%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           MSEIK+QNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS
Sbjct: 111 MSEIKRQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 170

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R TSEGYDQMMATNY+GPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDV VDEDTVC
Sbjct: 171 RLTSEGYDQMMATNYVGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVHVDEDTVC 230

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G  F  LDQYPCSSIY+YSKLCLLLFSYELHRKLSL+  SHKLTV VADPGVVKTNIMRE
Sbjct: 231 GKGFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLDKESHKLTVNVADPGVVKTNIMRE 290

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP YL+RVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGR V SSA+S +
Sbjct: 291 VPTYLSRVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRRVGSSAQSND 350

Query: 241 TKLAEELWETSSNLFLKSQITIGGETSS 269
            KLAEELWETSSNLF+KSQI++ G TSS
Sbjct: 351 AKLAEELWETSSNLFVKSQISVEGGTSS 378

[Close]
BLAST of Cla005868 vs. NCBI nr
Match: gi|700194619|gb|KGN49796.1| (hypothetical protein Csa_5G129320 [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 2.0e-130
Identity = 242/268 (90.30%), Postives = 252/268 (94.03%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           MSEIK+QNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS
Sbjct: 1   MSEIKRQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R TSEGYDQMMATNY+GPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDV VDEDTVC
Sbjct: 61  RLTSEGYDQMMATNYVGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVHVDEDTVC 120

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G  F  LDQYPCSSIY+YSKLCLLLFSYELHRKLSL+  SHKLTV VADPGVVKTNIMRE
Sbjct: 121 GKGFWGLDQYPCSSIYQYSKLCLLLFSYELHRKLSLDKESHKLTVNVADPGVVKTNIMRE 180

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP YL+RVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGR V SSA+S +
Sbjct: 181 VPTYLSRVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRRVGSSAQSND 240

Query: 241 TKLAEELWETSSNLFLKSQITIGGETSS 269
            KLAEELWETSSNLF+KSQI++ G TSS
Sbjct: 241 AKLAEELWETSSNLFVKSQISVEGGTSS 268

[Close]
BLAST of Cla005868 vs. NCBI nr
Match: gi|641825090|gb|KDO44378.1| (hypothetical protein CISIN_1g017580mg [Citrus sinensis])

HSP 1 Score: 357.5 bits (916), Expect = 2.1e-95
Identity = 180/260 (69.23%), Postives = 214/260 (82.31%), Query Frame = 1 

Query: 1   MSEIKKQNEKALLKAFQVDLLSIQSILDFKNSLQLWLQDSKMHPSVQLLINNAGILATSS 60
           M++I  +N+ A L+AFQVDL S QS+L FK+SLQ WL DS MH S+QLLINNAGILATSS
Sbjct: 27  MADITSRNKDARLEAFQVDLSSFQSVLKFKDSLQQWLLDSDMHSSIQLLINNAGILATSS 86

Query: 61  RFTSEGYDQMMATNYIGPFFLTQMLLPLLKNSPFPSRIVNVSSFTHRCVFDVQVDEDTVC 120
           R T EGYDQMM+TNYIG FFLT++LLPLLKNSP PSRIVNV+SFTHR VF+ QV+ +T+ 
Sbjct: 87  RLTPEGYDQMMSTNYIGAFFLTKLLLPLLKNSPVPSRIVNVTSFTHRNVFNAQVNNETIT 146

Query: 121 GNCFRVLDQYPCSSIYEYSKLCLLLFSYELHRKLSLENGSHKLTVIVADPGVVKTNIMRE 180
           G  F     YPC+ IYEYSKLCLL+FSYELHR L L+   H ++VI ADPGVVKTNIMRE
Sbjct: 147 GKFFLRSKCYPCARIYEYSKLCLLIFSYELHRNLGLDKSRH-VSVIAADPGVVKTNIMRE 206

Query: 181 VPAYLARVAFTILRLLRLLQLPKDGVNSILDAALASPETSGVYFFGGKGRMVKSSARSYN 240
           VP++L+ +AFT+L+LL LLQ P+ G+NS+LDAALA PETSGVYFFGGKGR V SSA S+N
Sbjct: 207 VPSFLSLMAFTVLKLLGLLQSPEKGINSVLDAALAPPETSGVYFFGGKGRTVNSSALSFN 266

Query: 241 TKLAEELWETSSNLFLKSQI 261
           +KLA ELW TS NLF+ SQ+
Sbjct: 267 SKLAGELWTTSCNLFINSQL 285

The following BLAST results are available for this feature:
BLAST of Cla005868 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DHRSX_HUMAN2.8e-2335.38Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHR... [more]
RDH14_HUMAN1.5e-1632.77Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1[more]
TIC32_ARATH7.4e-1631.14Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32... [more]
RDH14_MOUSE1.3e-1531.80Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1[more]
DHRSX_MOUSE3.1e-1431.33Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculu... [more]
BLAST of Cla005868 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067DZE9_CITSI1.5e-9569.23Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017580mg PE=4 SV=1[more]
A0A067E0G0_CITSI1.5e-9569.23Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017580mg PE=4 SV=1[more]
A0A067DN07_CITSI1.5e-9569.23Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017580mg PE=4 SV=1[more]
A0A067DNF0_CITSI1.5e-9569.23Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017580mg PE=4 SV=1[more]
V4V1K4_9ROSI4.7e-9468.46Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001762mg PE=4 SV=1[more]
BLAST of Cla005868 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072559|ref|XP_008466153.1|1.8e-13491.79PREDICTED: retinol dehydrogenase 13-like isoform X2 [Cucumis melo][more]
gi|659072555|ref|XP_008466139.1|1.8e-13491.79PREDICTED: retinol dehydrogenase 13-like isoform X1 [Cucumis melo][more]
gi|449463521|ref|XP_004149482.1|2.0e-13090.30PREDICTED: dehydrogenase/reductase SDR family member on chromosome X-like [Cucum... [more]
gi|700194619|gb|KGN49796.1|2.0e-13090.30hypothetical protein Csa_5G129320 [Cucumis sativus][more]
gi|641825090|gb|KDO44378.1|2.1e-9569.23hypothetical protein CISIN_1g017580mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005868Cla005868.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 40..104
score: 1.7
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 3..252
score: 3.2
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 13..231
score: 2.5
NoneNo IPR availablePANTHERPTHR24319FAMILY NOT NAMEDcoord: 1..261
score: 1.6
NoneNo IPR availablePANTHERPTHR24319:SF26PROTEIN DHS-1coord: 1..261
score: 1.6